Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170240 | XP_003623288.1 | 92.063 | 504 | 13 | 4 | 1 | 478 | 1 | 503 | 0.0 | 832 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170240 | G7KS85 | 92.063 | 504 | 13 | 4 | 1 | 478 | 1 | 503 | 0.0 | 887 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1064070 | Msa1170240 | 0.813888 | 2.037175e-51 | -8.615850e-47 |
| Msa1108440 | Msa1170240 | 0.981947 | 7.596932e-154 | -8.615850e-47 |
| Msa1108450 | Msa1170240 | 0.991916 | 2.955123e-190 | -8.615850e-47 |
| Msa1152220 | Msa1170240 | 0.992485 | 1.424521e-193 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170240 | MtrunA17_Chr7g0242211 | 92.063 | 504 | 13 | 4 | 1 | 478 | 1 | 503 | 0.0 | 887 |
| Msa1170240 | MtrunA17_Chr3g0113271 | 44.881 | 586 | 202 | 17 | 5 | 475 | 32 | 611 | 5.24e-121 | 367 |
| Msa1170240 | MtrunA17_Chr5g0436961 | 43.783 | 571 | 215 | 19 | 6 | 478 | 38 | 600 | 1.26e-109 | 337 |
| Msa1170240 | MtrunA17_Chr3g0122841 | 31.590 | 478 | 243 | 17 | 1 | 459 | 30 | 442 | 7.45e-28 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1170240 | AT2G40070.1 | 45.455 | 572 | 209 | 17 | 2 | 477 | 27 | 591 | 1.11e-113 | 348 |
| Msa1170240 | AT2G40070.2 | 45.161 | 558 | 203 | 18 | 16 | 477 | 1 | 551 | 3.12e-104 | 322 |
| Msa1170240 | AT2G40070.3 | 52.083 | 336 | 141 | 10 | 161 | 477 | 140 | 474 | 1.46e-80 | 258 |
| Msa1170240 | AT3G09000.1 | 41.636 | 538 | 238 | 17 | 1 | 478 | 1 | 522 | 1.28e-78 | 255 |
| Msa1170240 | AT5G01280.1 | 37.966 | 295 | 133 | 12 | 163 | 434 | 183 | 450 | 6.41e-30 | 122 |
| Msa1170240 | AT5G01280.3 | 37.966 | 295 | 133 | 12 | 163 | 434 | 159 | 426 | 7.48e-30 | 122 |
| Msa1170240 | AT1G27850.1 | 30.361 | 471 | 216 | 19 | 1 | 443 | 30 | 416 | 1.39e-25 | 111 |
| Msa1170240 | AT5G01280.2 | 35.955 | 267 | 122 | 11 | 163 | 407 | 159 | 398 | 1.35e-20 | 94.0 |
| Msa1170240 | AT2G38160.5 | 51.899 | 79 | 26 | 1 | 345 | 423 | 149 | 215 | 1.24e-18 | 85.1 |
| Msa1170240 | AT2G38160.4 | 51.899 | 79 | 26 | 1 | 345 | 423 | 146 | 212 | 1.25e-18 | 85.1 |
| Msa1170240 | AT2G38160.2 | 51.899 | 79 | 26 | 1 | 345 | 423 | 237 | 303 | 5.88e-18 | 85.1 |
| Msa1170240 | AT2G38160.2 | 37.097 | 186 | 86 | 7 | 1 | 182 | 5 | 163 | 1.52e-16 | 80.9 |
| Msa1170240 | AT2G38160.1 | 51.899 | 79 | 26 | 1 | 345 | 423 | 237 | 303 | 5.88e-18 | 85.1 |
| Msa1170240 | AT2G38160.1 | 37.097 | 186 | 86 | 7 | 1 | 182 | 5 | 163 | 1.52e-16 | 80.9 |
| Msa1170240 | AT2G38160.3 | 51.899 | 79 | 26 | 1 | 345 | 423 | 243 | 309 | 6.90e-18 | 85.1 |
| Msa1170240 | AT2G38160.3 | 37.186 | 199 | 90 | 7 | 1 | 181 | 5 | 186 | 3.25e-16 | 80.1 |
| Msa1170240 | AT2G38160.6 | 51.899 | 79 | 26 | 1 | 345 | 423 | 243 | 309 | 6.90e-18 | 85.1 |
| Msa1170240 | AT2G38160.6 | 37.186 | 199 | 90 | 7 | 1 | 181 | 5 | 186 | 3.25e-16 | 80.1 |
| Msa1170240 | AT3G08670.1 | 33.582 | 268 | 136 | 10 | 144 | 410 | 226 | 452 | 8.40e-15 | 77.4 |
Find 130 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAGTGATTTCTTCAAATT+TGG | 0.131377 | 7_4:+63393158 | None:intergenic |
| GTGACTGAAGCCGGTCTTTC+TGG | 0.168874 | 7_4:+63393137 | None:intergenic |
| TTCTTGAACCAGGTTCTATT+TGG | 0.244805 | 7_4:+63393687 | None:intergenic |
| TCTTCAACCACAGTCTTCTT+TGG | 0.262105 | 7_4:+63395336 | None:intergenic |
| TCTGCCAACAACAATTCTTA+TGG | 0.262117 | 7_4:-63392852 | Msa1170240:CDS |
| GTACCACAAACAAGCTTATA+TGG | 0.264734 | 7_4:+63391748 | None:intergenic |
| GCTGATCTTTGAGATGTCTT+AGG | 0.272627 | 7_4:+63393374 | None:intergenic |
| GGACATAAGGCGAAGCGTTC+AGG | 0.277796 | 7_4:-63392156 | Msa1170240:CDS |
| AATAACAACTCCATATCTTA+TGG | 0.299251 | 7_4:-63391990 | Msa1170240:CDS |
| GAAGAAAGCCCTGTTGTAAT+TGG | 0.303424 | 7_4:-63392939 | Msa1170240:CDS |
| GAATGATGATTGATGAATAT+TGG | 0.313653 | 7_4:+63395965 | None:intergenic |
| CATGCATCAATGTCAAGTTT+TGG | 0.314903 | 7_4:-63393644 | Msa1170240:CDS |
| TTCAAAGAAGTCTTTAGATA+TGG | 0.326090 | 7_4:-63392790 | Msa1170240:CDS |
| CGGCTTCAGTCACTAGAAAT+AGG | 0.331374 | 7_4:-63393127 | Msa1170240:CDS |
| AATTCTCTTACTGCCATTAG+TGG | 0.332131 | 7_4:+63393616 | None:intergenic |
| GGTGTTGATGATCGAATATT+AGG | 0.367903 | 7_4:+63393347 | None:intergenic |
| CTACCATTAGCACATTTACT+TGG | 0.384068 | 7_4:+63391827 | None:intergenic |
| AAGATGGTTTATTAATCATC+AGG | 0.390441 | 7_4:-63391939 | Msa1170240:three_prime_UTR |
| AATCTCACTTCCATAAGATA+TGG | 0.392247 | 7_4:+63391980 | None:intergenic |
| TCAACACCATCGAGGACATT+TGG | 0.396460 | 7_4:-63393332 | Msa1170240:CDS |
| CTCGAGGATTTCGTTGTTGA+AGG | 0.402723 | 7_4:+63393527 | None:intergenic |
| ACCGGATTCTTAGCAACAAC+AGG | 0.405466 | 7_4:+63393263 | None:intergenic |
| TATGTGAAACTTTGTCTTGT+TGG | 0.414526 | 7_4:+63396020 | None:intergenic |
| TCTTATGGAAAATCTTCAAC+TGG | 0.414898 | 7_4:-63392837 | Msa1170240:CDS |
| GGCACAAATAGCACAGATAT+TGG | 0.417669 | 7_4:-63391857 | Msa1170240:three_prime_UTR |
| ATCACATTTCAACTCATTGA+AGG | 0.424742 | 7_4:-63395824 | Msa1170240:intron |
| AAATCTTCAACTGGTAGCTC+TGG | 0.425500 | 7_4:-63392828 | Msa1170240:CDS |
| TCAACCACAGTCTTCTTTGG+TGG | 0.427459 | 7_4:+63395339 | None:intergenic |
| GCAGAAGGGTCGTTATGCTT+TGG | 0.428335 | 7_4:+63392870 | None:intergenic |
| TCAAGATCTTCAACTCCATC+TGG | 0.428365 | 7_4:-63393563 | Msa1170240:CDS |
| GGTGTTGAGGCCCTCGAAGC+GGG | 0.447411 | 7_4:+63393422 | None:intergenic |
| CCCTGTTGTTGCTAAGAATC+CGG | 0.447882 | 7_4:-63393264 | Msa1170240:intron |
| GAACTTGATTTGTCCAACTT+AGG | 0.455464 | 7_4:-63395494 | Msa1170240:intron |
| AAGAAAGCCCTGTTGTAATT+GGG | 0.456329 | 7_4:-63392938 | Msa1170240:CDS |
| TTTCTCTTATGCAGGACATA+AGG | 0.458600 | 7_4:-63392169 | Msa1170240:intron |
| CTAGCAATACTAAATCTAGA+AGG | 0.459081 | 7_4:-63393064 | Msa1170240:CDS |
| TCGAAAGGACGTGCTTCAGC+CGG | 0.461987 | 7_4:-63393026 | Msa1170240:CDS |
| ATCAGTAAAATCTAGACCTT+GGG | 0.464025 | 7_4:-63393219 | Msa1170240:CDS |
| AGAGAAGGTAATGGTGATGA+AGG | 0.465683 | 7_4:-63395609 | Msa1170240:exon |
| AGTGATTTCTTCAAATTTGG+AGG | 0.472587 | 7_4:+63393161 | None:intergenic |
| AAACTCTATGATTTCAAAGA+TGG | 0.474261 | 7_4:-63395373 | Msa1170240:CDS |
| TTCGTTGTTGAAGGTAATGT+TGG | 0.480614 | 7_4:+63393536 | None:intergenic |
| TGTGTTTCCTTGTCTAAAGT+AGG | 0.481105 | 7_4:+63394104 | None:intergenic |
| AAACCATATAAGCTTGTTTG+TGG | 0.485337 | 7_4:-63391751 | Msa1170240:three_prime_UTR |
| TGGGAACCCTCACAAATGCC+TGG | 0.487952 | 7_4:-63393200 | Msa1170240:CDS |
| GAAATCACTGCCAGAAAGAC+CGG | 0.488516 | 7_4:-63393147 | Msa1170240:CDS |
| GTTGAAGATCTTGAAGTAGC+TGG | 0.488757 | 7_4:+63393572 | None:intergenic |
| AGATATGGCAATGAGGCATA+TGG | 0.489004 | 7_4:-63392775 | Msa1170240:intron |
| CTCCCACTAGACCCGCTTCG+AGG | 0.490759 | 7_4:-63393433 | Msa1170240:CDS |
| GATCTTGAACTCGGAACTCC+AGG | 0.491055 | 7_4:+63393104 | None:intergenic |
| GGGCCTCAACACCTACTTCA+AGG | 0.493592 | 7_4:-63393412 | Msa1170240:CDS |
| CTTTGTTCCTTGAGATGAGG+AGG | 0.496371 | 7_4:-63395568 | Msa1170240:CDS |
| TAAGAATTGTTGTTGGCAGA+AGG | 0.499126 | 7_4:+63392855 | None:intergenic |
| GGCATTTGTGAGGGTTCCCA+AGG | 0.499483 | 7_4:+63393203 | None:intergenic |
| CATCAGTAAAATCTAGACCT+TGG | 0.501265 | 7_4:-63393220 | Msa1170240:CDS |
| AAATGTGATGAAATAAATGA+TGG | 0.505033 | 7_4:+63395838 | None:intergenic |
| CGAAAGGACGTGCTTCAGCC+GGG | 0.507353 | 7_4:-63393025 | Msa1170240:intron |
| TTGCTTTGTTCCTTGAGATG+AGG | 0.511091 | 7_4:-63395571 | Msa1170240:CDS |
| GTCTCCGTTTCACTCTTCAA+TGG | 0.512150 | 7_4:+63394077 | None:intergenic |
| TCTATGTACAGTGTGAGATC+AGG | 0.512316 | 7_4:-63392095 | Msa1170240:CDS |
| TGGCATTCAAATGTTTGAAA+CGG | 0.512396 | 7_4:+63396040 | None:intergenic |
| TCCCACTAGACCCGCTTCGA+GGG | 0.513001 | 7_4:-63393432 | Msa1170240:CDS |
| ATGATAAGTCTGATTATGAA+TGG | 0.516982 | 7_4:-63395296 | Msa1170240:intron |
| GTGCTAGATAGAGAAGGTAA+TGG | 0.517431 | 7_4:-63395618 | Msa1170240:exon |
| GGCCCGCGAGGTAGGTGTAG+AGG | 0.519439 | 7_4:+63393502 | None:intergenic |
| GCAGTGCTGCTTGTGGCATG+TGG | 0.519683 | 7_4:+63392032 | None:intergenic |
| TAAGAGAATTTCTTCGTCAA+GGG | 0.521003 | 7_4:-63393603 | Msa1170240:CDS |
| ATACCAAGTAAATGTGCTAA+TGG | 0.525081 | 7_4:-63391830 | Msa1170240:three_prime_UTR |
| CAGGTAGTTCATCTAAGAGC+AGG | 0.527623 | 7_4:-63392076 | Msa1170240:CDS |
| TCAACTGGTAGCTCTGGATT+CGG | 0.527784 | 7_4:-63392822 | Msa1170240:CDS |
| AGTAGAGCTCGTTTCACCGA+TGG | 0.531330 | 7_4:-63392966 | Msa1170240:CDS |
| TCTCTCTCCTCCTCATCTCA+AGG | 0.534681 | 7_4:+63395561 | None:intergenic |
| GAAGGGTCGTTATGCTTTGG+TGG | 0.538364 | 7_4:+63392873 | None:intergenic |
| GTAAGAGAATTTCTTCGTCA+AGG | 0.539407 | 7_4:-63393604 | Msa1170240:CDS |
| AGATGTCTTAGGAGCTGTCA+AGG | 0.549310 | 7_4:+63393385 | None:intergenic |
| AATCATCAGGACTCATATGA+TGG | 0.550432 | 7_4:-63391926 | Msa1170240:three_prime_UTR |
| GCTTGTGGCATGTGGCGAAT+CGG | 0.550591 | 7_4:+63392040 | None:intergenic |
| AAGAATTGTTGTTGGCAGAA+GGG | 0.552747 | 7_4:+63392856 | None:intergenic |
| ACTACATTGCTTCTTGAACC+AGG | 0.554242 | 7_4:+63393677 | None:intergenic |
| CTATTTCTAGTGACTGAAGC+CGG | 0.554548 | 7_4:+63393128 | None:intergenic |
| GATCTTGAAGTAGCTGGAGA+TGG | 0.559705 | 7_4:+63393578 | None:intergenic |
| TCAGTCACTAGAAATAGGCC+TGG | 0.563266 | 7_4:-63393122 | Msa1170240:CDS |
| GGAGCGTCATGAGTAAATCC+AGG | 0.565846 | 7_4:+63393182 | None:intergenic |
| GCTGACGAAGGTCGAGTAGG+AGG | 0.567753 | 7_4:+63393299 | None:intergenic |
| GTTAACGTGGCCCGCGAGGT+AGG | 0.568830 | 7_4:+63393494 | None:intergenic |
| GGTAATGTTGGCCTTCCAGA+TGG | 0.569687 | 7_4:+63393548 | None:intergenic |
| AGGGCTTTCTTCATCACCAT+CGG | 0.572486 | 7_4:+63392950 | None:intergenic |
| AGAGCTAGCAGTGCTGCTTG+TGG | 0.573611 | 7_4:+63392025 | None:intergenic |
| GCTGAAGCACGTCCTTTCGA+AGG | 0.575844 | 7_4:+63393029 | None:intergenic |
| GTGGGAGTTGATGATCTCAC+TGG | 0.580848 | 7_4:+63393449 | None:intergenic |
| GTCTTAGGAGCTGTCAAGGA+AGG | 0.581857 | 7_4:+63393389 | None:intergenic |
| TATGCTAGTGTTGGATAGAG+AGG | 0.583161 | 7_4:+63395896 | None:intergenic |
| AAAGTTCATAAAATGTCTCA+AGG | 0.590036 | 7_4:+63391782 | None:intergenic |
| ATGAAGAACTATGCTAGTGT+TGG | 0.590964 | 7_4:+63395887 | None:intergenic |
| AAGAGAATTTCTTCGTCAAG+GGG | 0.598036 | 7_4:-63393602 | Msa1170240:CDS |
| TTCAAGATCAGCTTCTGTTG+AGG | 0.600510 | 7_4:-63393090 | Msa1170240:CDS |
| GATAATATCCAAATAGAACC+TGG | 0.606440 | 7_4:-63393695 | Msa1170240:CDS |
| GGATAGAGAGGTGAATAACA+AGG | 0.607076 | 7_4:+63395908 | None:intergenic |
| GTCAAGGAAGGCCTTGAAGT+AGG | 0.613064 | 7_4:+63393401 | None:intergenic |
| AGTAAATCCAGGCATTTGTG+AGG | 0.616022 | 7_4:+63393193 | None:intergenic |
| CAGGACTCATATGATGGTCA+AGG | 0.616126 | 7_4:-63391920 | Msa1170240:three_prime_UTR |
| ACACTGTACATAGACGAAGC+TGG | 0.618965 | 7_4:+63392104 | None:intergenic |
| TAGAAGGTGCTAGATAGAGA+AGG | 0.622452 | 7_4:-63395624 | Msa1170240:five_prime_UTR |
| GATGCTGACGAAGGTCGAGT+AGG | 0.625399 | 7_4:+63393296 | None:intergenic |
| GATCTTCAACTCCATCTGGA+AGG | 0.627133 | 7_4:-63393559 | Msa1170240:CDS |
| TTTACTTCTTCAAAACTCTG+AGG | 0.627906 | 7_4:-63395516 | Msa1170240:CDS |
| CAGTCCAACACACCTTCGAA+AGG | 0.628165 | 7_4:-63393041 | Msa1170240:CDS |
| GTAAATCCAGGCATTTGTGA+GGG | 0.628865 | 7_4:+63393194 | None:intergenic |
| GCTGGAATGCTTGTCACGTG+TGG | 0.629743 | 7_4:+63392122 | None:intergenic |
| ACGTCCTTTCGAAGGTGTGT+TGG | 0.630372 | 7_4:+63393037 | None:intergenic |
| GATACTCCAAATGTCCTCGA+TGG | 0.633320 | 7_4:+63393326 | None:intergenic |
| AATGTGATGAAATAAATGAT+GGG | 0.635056 | 7_4:+63395839 | None:intergenic |
| GGCCCTCTACACCTACCTCG+CGG | 0.638423 | 7_4:-63393505 | Msa1170240:CDS |
| AAGAATCCGGTGCAGTCACG+TGG | 0.640150 | 7_4:-63393251 | Msa1170240:intron |
| ACAGAAGCTGATCTTGAACT+CGG | 0.650028 | 7_4:+63393095 | None:intergenic |
| AGGCCTTGAAGTAGGTGTTG+AGG | 0.654755 | 7_4:+63393409 | None:intergenic |
| GGAGTTGATGATCTCACTGG+TGG | 0.658546 | 7_4:+63393452 | None:intergenic |
| AGGTGTTGAGGCCCTCGAAG+CGG | 0.665966 | 7_4:+63393421 | None:intergenic |
| AGTTCCACCAAAGAAGACTG+TGG | 0.671508 | 7_4:-63395343 | Msa1170240:CDS |
| ATGTGATGAAATAAATGATG+GGG | 0.684317 | 7_4:+63395840 | None:intergenic |
| CCGGATTCTTAGCAACAACA+GGG | 0.684742 | 7_4:+63393264 | None:intergenic |
| AGTCTTTAGATATGGCAATG+AGG | 0.692928 | 7_4:-63392782 | Msa1170240:CDS |
| TGATGAATATTGGTTTGACA+AGG | 0.705101 | 7_4:+63395975 | None:intergenic |
| AGAAGTTAACGTGGCCCGCG+AGG | 0.710789 | 7_4:+63393490 | None:intergenic |
| TGACTTCGTAGAAGTTAACG+TGG | 0.714018 | 7_4:+63393481 | None:intergenic |
| GGTAGGTGTAGAGGGCCTCG+AGG | 0.716428 | 7_4:+63393511 | None:intergenic |
| TTCGATCATCAACACCATCG+AGG | 0.723170 | 7_4:-63393340 | Msa1170240:CDS |
| GAAGCGTTCAGGGTAATATG+CGG | 0.727762 | 7_4:-63392145 | Msa1170240:CDS |
| TGAATAACAAGGTAGCTGAG+TGG | 0.742956 | 7_4:+63395919 | None:intergenic |
| CTTCAACAACGAAATCCTCG+AGG | 0.762249 | 7_4:-63393526 | Msa1170240:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTAATATATATTGATC+TGG | - | chr7_4:63393324-63393343 | Msa1170240:CDS | 10.0% |
| !! | GATAAATAATTGATGTTAAA+TGG | - | chr7_4:63393126-63393145 | Msa1170240:CDS | 15.0% |
| !! | AATATTTATGGCATTATATA+TGG | - | chr7_4:63393392-63393411 | Msa1170240:CDS | 15.0% |
| !! | AATTAAGATTCAGTTAATAA+GGG | - | chr7_4:63393881-63393900 | Msa1170240:intron | 15.0% |
| !! | AATGTGATGAAATAAATGAT+GGG | + | chr7_4:63391918-63391937 | None:intergenic | 20.0% |
| !! | AAATGTGATGAAATAAATGA+TGG | + | chr7_4:63391919-63391938 | None:intergenic | 20.0% |
| !! | AAAATTGTGACTTTAGTAAT+TGG | - | chr7_4:63392047-63392066 | Msa1170240:CDS | 20.0% |
| !! | TGTTATAGTTAATGATGTTA+TGG | - | chr7_4:63392323-63392342 | Msa1170240:intron | 20.0% |
| !! | TATAGATCTTGTAAATCAAT+TGG | - | chr7_4:63392521-63392540 | Msa1170240:intron | 20.0% |
| !! | TGAAAACAGAAAATCAAAAT+AGG | + | chr7_4:63392598-63392617 | None:intergenic | 20.0% |
| !! | AAGTGAAAACAAAAGTAAAA+AGG | - | chr7_4:63392794-63392813 | Msa1170240:CDS | 20.0% |
| !! | AGTGAAAACAAAAGTAAAAA+GGG | - | chr7_4:63392795-63392814 | Msa1170240:CDS | 20.0% |
| !! | TTTCTATGTATAATTTGATG+TGG | - | chr7_4:63392866-63392885 | Msa1170240:CDS | 20.0% |
| !!! | TTTTCAGCTATTTCAAATTT+GGG | + | chr7_4:63393015-63393034 | None:intergenic | 20.0% |
| !!! | CAAAGTTGATTATGAATTTA+TGG | - | chr7_4:63393192-63393211 | Msa1170240:CDS | 20.0% |
| !! | AGAAACAAGTTCAATATTTA+TGG | - | chr7_4:63393380-63393399 | Msa1170240:CDS | 20.0% |
| !! | CATTTATGTATTATGCAATT+TGG | + | chr7_4:63393472-63393491 | None:intergenic | 20.0% |
| !! | GAATTAAGATTCAGTTAATA+AGG | - | chr7_4:63393880-63393899 | Msa1170240:intron | 20.0% |
| !! | ATAAAAGAAATGAATGTAGA+AGG | + | chr7_4:63393957-63393976 | None:intergenic | 20.0% |
| !! | TTAACGAGTATAATCTATTT+AGG | - | chr7_4:63395065-63395084 | Msa1170240:intron | 20.0% |
| !! | TAACGAGTATAATCTATTTA+GGG | - | chr7_4:63395066-63395085 | Msa1170240:intron | 20.0% |
| !!! | TTTTTTCATATGCTTAAACT+TGG | - | chr7_4:63395100-63395119 | Msa1170240:intron | 20.0% |
| !!! | AGAAAATGATTTTTAGAAGA+TGG | - | chr7_4:63395799-63395818 | Msa1170240:intron | 20.0% |
| !!! | TTTGCTATTTTATTTGTATG+TGG | - | chr7_4:63395873-63395892 | Msa1170240:five_prime_UTR | 20.0% |
| ! | GAATGATGATTGATGAATAT+TGG | + | chr7_4:63391792-63391811 | None:intergenic | 25.0% |
| !! | GTTTTTGTTCGATAATTTTG+AGG | + | chr7_4:63391814-63391833 | None:intergenic | 25.0% |
| ! | ATGTGATGAAATAAATGATG+GGG | + | chr7_4:63391917-63391936 | None:intergenic | 25.0% |
| !!! | GTTCTTTGTTTTTGCTTAAA+GGG | - | chr7_4:63392069-63392088 | Msa1170240:CDS | 25.0% |
| !!! | TTTGTTTTGTTGATCATAGA+AGG | - | chr7_4:63392114-63392133 | Msa1170240:CDS | 25.0% |
| ! | AAACAAAAAGTTACCTAAGT+TGG | + | chr7_4:63392276-63392295 | None:intergenic | 25.0% |
| !! | AATCATAGAGTTTTCATGAT+TGG | + | chr7_4:63392374-63392393 | None:intergenic | 25.0% |
| ! | AAACTCTATGATTTCAAAGA+TGG | - | chr7_4:63392381-63392400 | Msa1170240:intron | 25.0% |
| ! | ATGATAAGTCTGATTATGAA+TGG | - | chr7_4:63392458-63392477 | Msa1170240:intron | 25.0% |
| !! | CTGATTATGAATGGTAATTT+TGG | - | chr7_4:63392467-63392486 | Msa1170240:intron | 25.0% |
| ! | CAATAAATAGAAGAATGTGT+TGG | + | chr7_4:63392650-63392669 | None:intergenic | 25.0% |
| ! | AAATTTCCACTAAATCATGA+AGG | - | chr7_4:63392681-63392700 | Msa1170240:intron | 25.0% |
| ! | AGAAATTCTTATTGTCTAGT+TGG | - | chr7_4:63392890-63392909 | Msa1170240:CDS | 25.0% |
| !!! | CTTTTCAGCTATTTCAAATT+TGG | + | chr7_4:63393016-63393035 | None:intergenic | 25.0% |
| !!! | GTTTTGATAATGACAATTTG+AGG | - | chr7_4:63393045-63393064 | Msa1170240:CDS | 25.0% |
| !!! | TTGGTTATTTTTAGCATGAA+AGG | + | chr7_4:63393453-63393472 | None:intergenic | 25.0% |
| !! | TTTTCCATAAGAATTGTTGT+TGG | + | chr7_4:63394909-63394928 | None:intergenic | 25.0% |
| ! | TTCAAAGAAGTCTTTAGATA+TGG | - | chr7_4:63394964-63394983 | Msa1170240:intron | 25.0% |
| !!! | AGTTATTTCTATGCTCTATA+TGG | - | chr7_4:63395159-63395178 | Msa1170240:intron | 25.0% |
| ! | TAGTAATTTAGAGAACAAGT+AGG | + | chr7_4:63395215-63395234 | None:intergenic | 25.0% |
| ! | TCTCTAAATTACTAGAATGA+TGG | - | chr7_4:63395221-63395240 | Msa1170240:intron | 25.0% |
| ! | GAGTAAAAGATAGAATAGAA+AGG | - | chr7_4:63395273-63395292 | Msa1170240:intron | 25.0% |
| !!! | GTAACTTGTTTACTATGAAA+AGG | + | chr7_4:63395552-63395571 | None:intergenic | 25.0% |
| ! | AATAACAACTCCATATCTTA+TGG | - | chr7_4:63395764-63395783 | Msa1170240:intron | 25.0% |
| ! | AAGATGGTTTATTAATCATC+AGG | - | chr7_4:63395815-63395834 | Msa1170240:intron | 25.0% |
| ! | AAAGTTCATAAAATGTCTCA+AGG | + | chr7_4:63395975-63395994 | None:intergenic | 25.0% |
| !!! | CATTTTATGAACTTTGTTGT+AGG | - | chr7_4:63395980-63395999 | Msa1170240:five_prime_UTR | 25.0% |
| TGGCATTCAAATGTTTGAAA+CGG | + | chr7_4:63391717-63391736 | None:intergenic | 30.0% | |
| TATGTGAAACTTTGTCTTGT+TGG | + | chr7_4:63391737-63391756 | None:intergenic | 30.0% | |
| !! | TGATGAATATTGGTTTGACA+AGG | + | chr7_4:63391782-63391801 | None:intergenic | 30.0% |
| ATCACATTTCAACTCATTGA+AGG | - | chr7_4:63391930-63391949 | Msa1170240:three_prime_UTR | 30.0% | |
| TGAAGCAAGATTGTTCAAAA+GGG | + | chr7_4:63391989-63392008 | None:intergenic | 30.0% | |
| ATGAAGCAAGATTGTTCAAA+AGG | + | chr7_4:63391990-63392009 | None:intergenic | 30.0% | |
| ! | TTTTGAACAATCTTGCTTCA+TGG | - | chr7_4:63391989-63392008 | Msa1170240:CDS | 30.0% |
| !!! | GGTTCTTTGTTTTTGCTTAA+AGG | - | chr7_4:63392068-63392087 | Msa1170240:CDS | 30.0% |
| !!! | CAGAGTTTTGAAGAAGTAAA+AGG | + | chr7_4:63392238-63392257 | None:intergenic | 30.0% |
| TTTACTTCTTCAAAACTCTG+AGG | - | chr7_4:63392238-63392257 | Msa1170240:intron | 30.0% | |
| TGAAATTTATGGGACCTATA+AGG | - | chr7_4:63392711-63392730 | Msa1170240:intron | 30.0% | |
| ACATACTCTCTAATCCTTAT+AGG | + | chr7_4:63392728-63392747 | None:intergenic | 30.0% | |
| ! | ACATTGTGTTTTCACAAACT+AGG | + | chr7_4:63392757-63392776 | None:intergenic | 30.0% |
| AACGTCATTCAAATTGCAAA+AGG | - | chr7_4:63392937-63392956 | Msa1170240:CDS | 30.0% | |
| GTTTGATTGTTGTATTTGTG+CGG | - | chr7_4:63392988-63393007 | Msa1170240:intron | 30.0% | |
| TAATGAATGAAGACAAGATC+AGG | + | chr7_4:63393101-63393120 | None:intergenic | 30.0% | |
| ! | TTGTCTAAAGTAGGAAAAAG+CGG | + | chr7_4:63393644-63393663 | None:intergenic | 30.0% |
| CTCATATTACATGTCTCTTA+AGG | - | chr7_4:63393761-63393780 | Msa1170240:intron | 30.0% | |
| !!! | AATGTAGAAGGTTTTGAGTA+AGG | + | chr7_4:63393945-63393964 | None:intergenic | 30.0% |
| GATAATATCCAAATAGAACC+TGG | - | chr7_4:63394059-63394078 | Msa1170240:intron | 30.0% | |
| TAAGAGAATTTCTTCGTCAA+GGG | - | chr7_4:63394151-63394170 | Msa1170240:intron | 30.0% | |
| ATCAGTAAAATCTAGACCTT+GGG | - | chr7_4:63394535-63394554 | Msa1170240:intron | 30.0% | |
| AGTGATTTCTTCAAATTTGG+AGG | + | chr7_4:63394596-63394615 | None:intergenic | 30.0% | |
| CTAGCAATACTAAATCTAGA+AGG | - | chr7_4:63394690-63394709 | Msa1170240:intron | 30.0% | |
| ATGATTATTGTGAGTAAACC+CGG | + | chr7_4:63394750-63394769 | None:intergenic | 30.0% | |
| ! | TTTTTGTCCCAATTACAACA+GGG | + | chr7_4:63394826-63394845 | None:intergenic | 30.0% |
| ! | ATTTTTGTCCCAATTACAAC+AGG | + | chr7_4:63394827-63394846 | None:intergenic | 30.0% |
| TGTTGTAATTGGGACAAAAA+TGG | - | chr7_4:63394826-63394845 | Msa1170240:intron | 30.0% | |
| TCTTATGGAAAATCTTCAAC+TGG | - | chr7_4:63394917-63394936 | Msa1170240:intron | 30.0% | |
| TACAAAATCAGTAGTGTTGT+AGG | + | chr7_4:63395038-63395057 | None:intergenic | 30.0% | |
| GTATACTTCCTTGAAGTAAA+AGG | - | chr7_4:63395122-63395141 | Msa1170240:intron | 30.0% | |
| ! | GTTATTTGCCTTTTACTTCA+AGG | + | chr7_4:63395133-63395152 | None:intergenic | 30.0% |
| TATGGTAATAACAGAGGAAA+TGG | - | chr7_4:63395177-63395196 | Msa1170240:intron | 30.0% | |
| AATCTCACTTCCATAAGATA+TGG | + | chr7_4:63395777-63395796 | None:intergenic | 30.0% | |
| !! | GCTATTTTATTTGTATGTGG+TGG | - | chr7_4:63395876-63395895 | Msa1170240:five_prime_UTR | 30.0% |
| ATACCAAGTAAATGTGCTAA+TGG | - | chr7_4:63395924-63395943 | Msa1170240:five_prime_UTR | 30.0% | |
| ! | AAACCATATAAGCTTGTTTG+TGG | - | chr7_4:63396003-63396022 | Msa1170240:five_prime_UTR | 30.0% |
| ATGAAGAACTATGCTAGTGT+TGG | + | chr7_4:63391870-63391889 | None:intergenic | 35.0% | |
| !! | GAACTTGATTTGTCCAACTT+AGG | - | chr7_4:63392260-63392279 | Msa1170240:intron | 35.0% |
| AGGTCCCATAAATTTCATGT+GGG | + | chr7_4:63392708-63392727 | None:intergenic | 35.0% | |
| TAGGTCCCATAAATTTCATG+TGG | + | chr7_4:63392709-63392728 | None:intergenic | 35.0% | |
| AGACAAGATCAGGAACATAA+AGG | + | chr7_4:63393091-63393110 | None:intergenic | 35.0% | |
| ! | GACAAGAGTTTTCTGTTATC+AGG | - | chr7_4:63393597-63393616 | Msa1170240:CDS | 35.0% |
| !! | GCTTTTTCCTACTTTAGACA+AGG | - | chr7_4:63393643-63393662 | Msa1170240:CDS | 35.0% |
| ! | TGTGTTTCCTTGTCTAAAGT+AGG | + | chr7_4:63393653-63393672 | None:intergenic | 35.0% |
| AATGCCATTGAAGAGTGAAA+CGG | - | chr7_4:63393673-63393692 | Msa1170240:CDS | 35.0% | |
| !! | TCCAACTGCTTTAAAGCTAA+GGG | - | chr7_4:63393712-63393731 | Msa1170240:intron | 35.0% |
| AGACATGTAATATGAGACAG+AGG | + | chr7_4:63393757-63393776 | None:intergenic | 35.0% | |
| TCACCTAACTGCTATTGATA+GGG | + | chr7_4:63393862-63393881 | None:intergenic | 35.0% | |
| TTCACCTAACTGCTATTGAT+AGG | + | chr7_4:63393863-63393882 | None:intergenic | 35.0% | |
| GTAAGGTAGAAGAATCAAAG+AGG | + | chr7_4:63393928-63393947 | None:intergenic | 35.0% | |
| ATAAACCTTTCTTGTGTTGC+AGG | - | chr7_4:63394034-63394053 | Msa1170240:intron | 35.0% | |
| TTCTTGAACCAGGTTCTATT+TGG | + | chr7_4:63394070-63394089 | None:intergenic | 35.0% | |
| ! | CATGCATCAATGTCAAGTTT+TGG | - | chr7_4:63394110-63394129 | Msa1170240:CDS | 35.0% |
| !!! | AGTTTTGGTTCTTCCACTAA+TGG | - | chr7_4:63394125-63394144 | Msa1170240:CDS | 35.0% |
| AATTCTCTTACTGCCATTAG+TGG | + | chr7_4:63394141-63394160 | None:intergenic | 35.0% | |
| GTAAGAGAATTTCTTCGTCA+AGG | - | chr7_4:63394150-63394169 | Msa1170240:intron | 35.0% | |
| AAGAGAATTTCTTCGTCAAG+GGG | - | chr7_4:63394152-63394171 | Msa1170240:intron | 35.0% | |
| TTCGTTGTTGAAGGTAATGT+TGG | + | chr7_4:63394221-63394240 | None:intergenic | 35.0% | |
| !! | GGTGTTGATGATCGAATATT+AGG | + | chr7_4:63394410-63394429 | None:intergenic | 35.0% |
| ! | CAAGGTCTAGATTTTACTGA+TGG | + | chr7_4:63394536-63394555 | None:intergenic | 35.0% |
| CATCAGTAAAATCTAGACCT+TGG | - | chr7_4:63394534-63394553 | Msa1170240:intron | 35.0% | |
| GGCAGTGATTTCTTCAAATT+TGG | + | chr7_4:63394599-63394618 | None:intergenic | 35.0% | |
| AAGAAAGCCCTGTTGTAATT+GGG | - | chr7_4:63394816-63394835 | Msa1170240:intron | 35.0% | |
| ! | AAGAATTGTTGTTGGCAGAA+GGG | + | chr7_4:63394901-63394920 | None:intergenic | 35.0% |
| ! | TAAGAATTGTTGTTGGCAGA+AGG | + | chr7_4:63394902-63394921 | None:intergenic | 35.0% |
| TCTGCCAACAACAATTCTTA+TGG | - | chr7_4:63394902-63394921 | Msa1170240:intron | 35.0% | |
| AGTCTTTAGATATGGCAATG+AGG | - | chr7_4:63394972-63394991 | Msa1170240:intron | 35.0% | |
| GCTCTATATGGTAATAACAG+AGG | - | chr7_4:63395171-63395190 | Msa1170240:intron | 35.0% | |
| !! | GTTGATGATTTCTCTTATGC+AGG | - | chr7_4:63395577-63395596 | Msa1170240:CDS | 35.0% |
| TTTCTCTTATGCAGGACATA+AGG | - | chr7_4:63395585-63395604 | Msa1170240:CDS | 35.0% | |
| AATCATCAGGACTCATATGA+TGG | - | chr7_4:63395828-63395847 | Msa1170240:five_prime_UTR | 35.0% | |
| CTACCATTAGCACATTTACT+TGG | + | chr7_4:63395930-63395949 | None:intergenic | 35.0% | |
| GTACCACAAACAAGCTTATA+TGG | + | chr7_4:63396009-63396028 | None:intergenic | 35.0% | |
| TGAATAACAAGGTAGCTGAG+TGG | + | chr7_4:63391838-63391857 | None:intergenic | 40.0% | |
| GGATAGAGAGGTGAATAACA+AGG | + | chr7_4:63391849-63391868 | None:intergenic | 40.0% | |
| ! | TATGCTAGTGTTGGATAGAG+AGG | + | chr7_4:63391861-63391880 | None:intergenic | 40.0% |
| !! | TAGAAGGTGCTAGATAGAGA+AGG | - | chr7_4:63392130-63392149 | Msa1170240:CDS | 40.0% |
| GTGCTAGATAGAGAAGGTAA+TGG | - | chr7_4:63392136-63392155 | Msa1170240:CDS | 40.0% | |
| ! | AGAGAAGGTAATGGTGATGA+AGG | - | chr7_4:63392145-63392164 | Msa1170240:CDS | 40.0% |
| ! | TTGCTTTGTTCCTTGAGATG+AGG | - | chr7_4:63392183-63392202 | Msa1170240:intron | 40.0% |
| TCTTCAACCACAGTCTTCTT+TGG | + | chr7_4:63392421-63392440 | None:intergenic | 40.0% | |
| AAGGCCCCACATGAAATTTA+TGG | - | chr7_4:63392700-63392719 | Msa1170240:intron | 40.0% | |
| AGGCCCCACATGAAATTTAT+GGG | - | chr7_4:63392701-63392720 | Msa1170240:intron | 40.0% | |
| GGTCCCATAAATTTCATGTG+GGG | + | chr7_4:63392707-63392726 | None:intergenic | 40.0% | |
| ! | CCAAAGCTTAAGAGCATGTT+TGG | + | chr7_4:63392836-63392855 | None:intergenic | 40.0% |
| CCAAACATGCTCTTAAGCTT+TGG | - | chr7_4:63392833-63392852 | Msa1170240:CDS | 40.0% | |
| !! | TGCTCTTAAGCTTTGGAATG+TGG | - | chr7_4:63392840-63392859 | Msa1170240:CDS | 40.0% |
| AAGATCAGGAACATAAAGGC+TGG | + | chr7_4:63393087-63393106 | None:intergenic | 40.0% | |
| GATTAAGTGCAAACTTTCCG+CGG | - | chr7_4:63393350-63393369 | Msa1170240:CDS | 40.0% | |
| GAAAACTCTTGTCAGTGTGA+AGG | + | chr7_4:63393590-63393609 | None:intergenic | 40.0% | |
| !! | GTCCAACTGCTTTAAAGCTA+AGG | - | chr7_4:63393711-63393730 | Msa1170240:intron | 40.0% |
| !! | ACCCTTAGCTTTAAAGCAGT+TGG | + | chr7_4:63393716-63393735 | None:intergenic | 40.0% |
| TCTTAAGGTTACACACACAG+AGG | - | chr7_4:63393776-63393795 | Msa1170240:intron | 40.0% | |
| TACCCCTATCAATAGCAGTT+AGG | - | chr7_4:63393856-63393875 | Msa1170240:intron | 40.0% | |
| CACCTAACTGCTATTGATAG+GGG | + | chr7_4:63393861-63393880 | None:intergenic | 40.0% | |
| ATCTACCTGCAACACAAGAA+AGG | + | chr7_4:63394042-63394061 | None:intergenic | 40.0% | |
| ACTACATTGCTTCTTGAACC+AGG | + | chr7_4:63394080-63394099 | None:intergenic | 40.0% | |
| GTTGAAGATCTTGAAGTAGC+TGG | + | chr7_4:63394185-63394204 | None:intergenic | 40.0% | |
| TCAAGATCTTCAACTCCATC+TGG | - | chr7_4:63394191-63394210 | Msa1170240:intron | 40.0% | |
| TGACTTCGTAGAAGTTAACG+TGG | + | chr7_4:63394276-63394295 | None:intergenic | 40.0% | |
| !! | GCTGATCTTTGAGATGTCTT+AGG | + | chr7_4:63394383-63394402 | None:intergenic | 40.0% |
| GTAAATCCAGGCATTTGTGA+GGG | + | chr7_4:63394563-63394582 | None:intergenic | 40.0% | |
| AGTAAATCCAGGCATTTGTG+AGG | + | chr7_4:63394564-63394583 | None:intergenic | 40.0% | |
| !! | CTATTTCTAGTGACTGAAGC+CGG | + | chr7_4:63394629-63394648 | None:intergenic | 40.0% |
| ACAGAAGCTGATCTTGAACT+CGG | + | chr7_4:63394662-63394681 | None:intergenic | 40.0% | |
| TTCAAGATCAGCTTCTGTTG+AGG | - | chr7_4:63394664-63394683 | Msa1170240:intron | 40.0% | |
| GAAGAAAGCCCTGTTGTAAT+TGG | - | chr7_4:63394815-63394834 | Msa1170240:intron | 40.0% | |
| AAATCTTCAACTGGTAGCTC+TGG | - | chr7_4:63394926-63394945 | Msa1170240:intron | 40.0% | |
| AGATATGGCAATGAGGCATA+TGG | - | chr7_4:63394979-63394998 | Msa1170240:intron | 40.0% | |
| TTAGAGAACAAGTAGGAGCA+TGG | + | chr7_4:63395208-63395227 | None:intergenic | 40.0% | |
| TCTATGTACAGTGTGAGATC+AGG | - | chr7_4:63395659-63395678 | Msa1170240:intron | 40.0% | |
| GGCACAAATAGCACAGATAT+TGG | - | chr7_4:63395897-63395916 | Msa1170240:five_prime_UTR | 40.0% | |
| CTTTGTTCCTTGAGATGAGG+AGG | - | chr7_4:63392186-63392205 | Msa1170240:intron | 45.0% | |
| AGTTCCACCAAAGAAGACTG+TGG | - | chr7_4:63392411-63392430 | Msa1170240:intron | 45.0% | |
| TCAACCACAGTCTTCTTTGG+TGG | + | chr7_4:63392418-63392437 | None:intergenic | 45.0% | |
| AGGAACATAAAGGCTGGATG+TGG | + | chr7_4:63393081-63393100 | None:intergenic | 45.0% | |
| !! | ACTTGTTTCTGATTCCTCCG+CGG | + | chr7_4:63393370-63393389 | None:intergenic | 45.0% |
| GTAGGAAAAAGCGGTGTATC+AGG | + | chr7_4:63393635-63393654 | None:intergenic | 45.0% | |
| GTCTCCGTTTCACTCTTCAA+TGG | + | chr7_4:63393680-63393699 | None:intergenic | 45.0% | |
| GATCTTGAAGTAGCTGGAGA+TGG | + | chr7_4:63394179-63394198 | None:intergenic | 45.0% | |
| GATCTTCAACTCCATCTGGA+AGG | - | chr7_4:63394195-63394214 | Msa1170240:intron | 45.0% | |
| CTCGAGGATTTCGTTGTTGA+AGG | + | chr7_4:63394230-63394249 | None:intergenic | 45.0% | |
| CTTCAACAACGAAATCCTCG+AGG | - | chr7_4:63394228-63394247 | Msa1170240:intron | 45.0% | |
| AGATGTCTTAGGAGCTGTCA+AGG | + | chr7_4:63394372-63394391 | None:intergenic | 45.0% | |
| TTCGATCATCAACACCATCG+AGG | - | chr7_4:63394414-63394433 | Msa1170240:intron | 45.0% | |
| TCAACACCATCGAGGACATT+TGG | - | chr7_4:63394422-63394441 | Msa1170240:intron | 45.0% | |
| GATACTCCAAATGTCCTCGA+TGG | + | chr7_4:63394431-63394450 | None:intergenic | 45.0% | |
| CCGGATTCTTAGCAACAACA+GGG | + | chr7_4:63394493-63394512 | None:intergenic | 45.0% | |
| CCCTGTTGTTGCTAAGAATC+CGG | - | chr7_4:63394490-63394509 | Msa1170240:intron | 45.0% | |
| ACCGGATTCTTAGCAACAAC+AGG | + | chr7_4:63394494-63394513 | None:intergenic | 45.0% | |
| GAAATCACTGCCAGAAAGAC+CGG | - | chr7_4:63394607-63394626 | Msa1170240:intron | 45.0% | |
| CGGCTTCAGTCACTAGAAAT+AGG | - | chr7_4:63394627-63394646 | Msa1170240:intron | 45.0% | |
| TCAGTCACTAGAAATAGGCC+TGG | - | chr7_4:63394632-63394651 | Msa1170240:intron | 45.0% | |
| AGGGCTTTCTTCATCACCAT+CGG | + | chr7_4:63394807-63394826 | None:intergenic | 45.0% | |
| !! | TCAACTGGTAGCTCTGGATT+CGG | - | chr7_4:63394932-63394951 | Msa1170240:intron | 45.0% |
| ! | GAAGCGTTCAGGGTAATATG+CGG | - | chr7_4:63395609-63395628 | Msa1170240:exon | 45.0% |
| ACACTGTACATAGACGAAGC+TGG | + | chr7_4:63395653-63395672 | None:intergenic | 45.0% | |
| CAGGTAGTTCATCTAAGAGC+AGG | - | chr7_4:63395678-63395697 | Msa1170240:intron | 45.0% | |
| CAGGACTCATATGATGGTCA+AGG | - | chr7_4:63395834-63395853 | Msa1170240:five_prime_UTR | 45.0% | |
| !! | ATCAATATATATTAATATTA+AGG | + | chr7_4:63393323-63393342 | None:intergenic | 5.0% |
| TCTCTCTCCTCCTCATCTCA+AGG | + | chr7_4:63392196-63392215 | None:intergenic | 50.0% | |
| GTGGGGCCTTCATGATTTAG+TGG | + | chr7_4:63392690-63392709 | None:intergenic | 50.0% | |
| ! | GGTGCTGAGTGCTTTGTCAA+AGG | - | chr7_4:63393213-63393232 | Msa1170240:CDS | 50.0% |
| TAAGTGCAAACTTTCCGCGG+AGG | - | chr7_4:63393353-63393372 | Msa1170240:CDS | 50.0% | |
| GGAAAAAGCGGTGTATCAGG+TGG | + | chr7_4:63393632-63393651 | None:intergenic | 50.0% | |
| !! | GGTAATGTTGGCCTTCCAGA+TGG | + | chr7_4:63394209-63394228 | None:intergenic | 50.0% |
| !! | GGAGTTGATGATCTCACTGG+TGG | + | chr7_4:63394305-63394324 | None:intergenic | 50.0% |
| !! | GTGGGAGTTGATGATCTCAC+TGG | + | chr7_4:63394308-63394327 | None:intergenic | 50.0% |
| ! | AGGCCTTGAAGTAGGTGTTG+AGG | + | chr7_4:63394348-63394367 | None:intergenic | 50.0% |
| GTCAAGGAAGGCCTTGAAGT+AGG | + | chr7_4:63394356-63394375 | None:intergenic | 50.0% | |
| GTCTTAGGAGCTGTCAAGGA+AGG | + | chr7_4:63394368-63394387 | None:intergenic | 50.0% | |
| ! | CGTGCTTTTGATGCTGACGA+AGG | + | chr7_4:63394470-63394489 | None:intergenic | 50.0% |
| ! | GGAGCGTCATGAGTAAATCC+AGG | + | chr7_4:63394575-63394594 | None:intergenic | 50.0% |
| GATCTTGAACTCGGAACTCC+AGG | + | chr7_4:63394653-63394672 | None:intergenic | 50.0% | |
| CAGTCCAACACACCTTCGAA+AGG | - | chr7_4:63394713-63394732 | Msa1170240:intron | 50.0% | |
| ! | ACGTCCTTTCGAAGGTGTGT+TGG | + | chr7_4:63394720-63394739 | None:intergenic | 50.0% |
| AGTAGAGCTCGTTTCACCGA+TGG | - | chr7_4:63394788-63394807 | Msa1170240:intron | 50.0% | |
| GAAGGGTCGTTATGCTTTGG+TGG | + | chr7_4:63394884-63394903 | None:intergenic | 50.0% | |
| GCAGAAGGGTCGTTATGCTT+TGG | + | chr7_4:63394887-63394906 | None:intergenic | 50.0% | |
| ! | GACATAAGGCGAAGCGTTCA+GGG | - | chr7_4:63395599-63395618 | Msa1170240:CDS | 50.0% |
| GGGCCTCAACACCTACTTCA+AGG | - | chr7_4:63394342-63394361 | Msa1170240:intron | 55.0% | |
| GATGCTGACGAAGGTCGAGT+AGG | + | chr7_4:63394461-63394480 | None:intergenic | 55.0% | |
| AAGAATCCGGTGCAGTCACG+TGG | - | chr7_4:63394503-63394522 | Msa1170240:intron | 55.0% | |
| GGCATTTGTGAGGGTTCCCA+AGG | + | chr7_4:63394554-63394573 | None:intergenic | 55.0% | |
| TGGGAACCCTCACAAATGCC+TGG | - | chr7_4:63394554-63394573 | Msa1170240:intron | 55.0% | |
| GTGACTGAAGCCGGTCTTTC+TGG | + | chr7_4:63394620-63394639 | None:intergenic | 55.0% | |
| GCTGAAGCACGTCCTTTCGA+AGG | + | chr7_4:63394728-63394747 | None:intergenic | 55.0% | |
| TCGAAAGGACGTGCTTCAGC+CGG | - | chr7_4:63394728-63394747 | Msa1170240:intron | 55.0% | |
| ! | GGACATAAGGCGAAGCGTTC+AGG | - | chr7_4:63395598-63395617 | Msa1170240:CDS | 55.0% |
| GCTGGAATGCTTGTCACGTG+TGG | + | chr7_4:63395635-63395654 | None:intergenic | 55.0% | |
| GCTTGTGGCATGTGGCGAAT+CGG | + | chr7_4:63395717-63395736 | None:intergenic | 55.0% | |
| !! | AGAGCTAGCAGTGCTGCTTG+TGG | + | chr7_4:63395732-63395751 | None:intergenic | 55.0% |
| AGAAGTTAACGTGGCCCGCG+AGG | + | chr7_4:63394267-63394286 | None:intergenic | 60.0% | |
| TCCCACTAGACCCGCTTCGA+GGG | - | chr7_4:63394322-63394341 | Msa1170240:intron | 60.0% | |
| !! | AGGTGTTGAGGCCCTCGAAG+CGG | + | chr7_4:63394336-63394355 | None:intergenic | 60.0% |
| GCTGACGAAGGTCGAGTAGG+AGG | + | chr7_4:63394458-63394477 | None:intergenic | 60.0% | |
| GAGATGCCACGTGACTGCAC+CGG | + | chr7_4:63394512-63394531 | None:intergenic | 60.0% | |
| CGAAAGGACGTGCTTCAGCC+GGG | - | chr7_4:63394729-63394748 | Msa1170240:intron | 60.0% | |
| !! | GCAGTGCTGCTTGTGGCATG+TGG | + | chr7_4:63395725-63395744 | None:intergenic | 60.0% |
| GGTAGGTGTAGAGGGCCTCG+AGG | + | chr7_4:63394246-63394265 | None:intergenic | 65.0% | |
| GGCCCTCTACACCTACCTCG+CGG | - | chr7_4:63394249-63394268 | Msa1170240:intron | 65.0% | |
| GCCCTCTACACCTACCTCGC+GGG | - | chr7_4:63394250-63394269 | Msa1170240:intron | 65.0% | |
| GCCCGCGAGGTAGGTGTAGA+GGG | + | chr7_4:63394254-63394273 | None:intergenic | 65.0% | |
| GTTAACGTGGCCCGCGAGGT+AGG | + | chr7_4:63394263-63394282 | None:intergenic | 65.0% | |
| CTCCCACTAGACCCGCTTCG+AGG | - | chr7_4:63394321-63394340 | Msa1170240:intron | 65.0% | |
| GCCCTCGAAGCGGGTCTAGT+GGG | + | chr7_4:63394326-63394345 | None:intergenic | 65.0% | |
| ! | GGTGTTGAGGCCCTCGAAGC+GGG | + | chr7_4:63394335-63394354 | None:intergenic | 65.0% |
| GGCCCGCGAGGTAGGTGTAG+AGG | + | chr7_4:63394255-63394274 | None:intergenic | 70.0% | |
| GGCCCTCGAAGCGGGTCTAG+TGG | + | chr7_4:63394327-63394346 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 63391682 | 63396094 | 63391682 | ID=Msa1170240;Name=Msa1170240 |
| chr7_4 | mRNA | 63391682 | 63396094 | 63391682 | ID=Msa1170240-mRNA-1;Parent=Msa1170240;Name=Msa1170240-mRNA-1;_AED=0.03;_eAED=0.03;_QI=292|0.57|0.5|1|0.42|0.25|8|280|478 |
| chr7_4 | exon | 63391682 | 63392177 | 63391682 | ID=Msa1170240-mRNA-1:exon:20273;Parent=Msa1170240-mRNA-1 |
| chr7_4 | exon | 63392776 | 63393004 | 63392776 | ID=Msa1170240-mRNA-1:exon:20272;Parent=Msa1170240-mRNA-1 |
| chr7_4 | exon | 63393026 | 63393258 | 63393026 | ID=Msa1170240-mRNA-1:exon:20271;Parent=Msa1170240-mRNA-1 |
| chr7_4 | exon | 63393265 | 63393716 | 63393265 | ID=Msa1170240-mRNA-1:exon:20270;Parent=Msa1170240-mRNA-1 |
| chr7_4 | exon | 63394090 | 63394157 | 63394090 | ID=Msa1170240-mRNA-1:exon:20269;Parent=Msa1170240-mRNA-1 |
| chr7_4 | exon | 63395297 | 63395408 | 63395297 | ID=Msa1170240-mRNA-1:exon:20268;Parent=Msa1170240-mRNA-1 |
| chr7_4 | exon | 63395495 | 63395643 | 63395495 | ID=Msa1170240-mRNA-1:exon:20267;Parent=Msa1170240-mRNA-1 |
| chr7_4 | exon | 63395825 | 63396094 | 63395825 | ID=Msa1170240-mRNA-1:exon:20266;Parent=Msa1170240-mRNA-1 |
| chr7_4 | five_prime_UTR | 63395825 | 63396094 | 63395825 | ID=Msa1170240-mRNA-1:five_prime_utr;Parent=Msa1170240-mRNA-1 |
| chr7_4 | five_prime_UTR | 63395622 | 63395643 | 63395622 | ID=Msa1170240-mRNA-1:five_prime_utr;Parent=Msa1170240-mRNA-1 |
| chr7_4 | CDS | 63395495 | 63395621 | 63395495 | ID=Msa1170240-mRNA-1:cds;Parent=Msa1170240-mRNA-1 |
| chr7_4 | CDS | 63395297 | 63395408 | 63395297 | ID=Msa1170240-mRNA-1:cds;Parent=Msa1170240-mRNA-1 |
| chr7_4 | CDS | 63394090 | 63394157 | 63394090 | ID=Msa1170240-mRNA-1:cds;Parent=Msa1170240-mRNA-1 |
| chr7_4 | CDS | 63393265 | 63393716 | 63393265 | ID=Msa1170240-mRNA-1:cds;Parent=Msa1170240-mRNA-1 |
| chr7_4 | CDS | 63393026 | 63393258 | 63393026 | ID=Msa1170240-mRNA-1:cds;Parent=Msa1170240-mRNA-1 |
| chr7_4 | CDS | 63392776 | 63393004 | 63392776 | ID=Msa1170240-mRNA-1:cds;Parent=Msa1170240-mRNA-1 |
| chr7_4 | CDS | 63391962 | 63392177 | 63391962 | ID=Msa1170240-mRNA-1:cds;Parent=Msa1170240-mRNA-1 |
| chr7_4 | three_prime_UTR | 63391682 | 63391961 | 63391682 | ID=Msa1170240-mRNA-1:three_prime_utr;Parent=Msa1170240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
