AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1108440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1108440 MtrunA17_Chr7g0242211 96.986 365 10 1 1 365 140 503 0.0 677
Msa1108440 MtrunA17_Chr5g0436961 50.000 358 155 8 25 365 250 600 2.20e-85 270
Msa1108440 MtrunA17_Chr3g0113271 45.000 440 154 11 10 363 175 612 1.57e-84 268
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1108440 AT2G40070.3 51.917 339 146 9 39 364 140 474 1.88e-84 265
Msa1108440 AT2G40070.2 51.917 339 146 9 39 364 217 551 6.52e-83 263
Msa1108440 AT2G40070.1 51.917 339 146 9 39 364 257 591 1.54e-82 263
Msa1108440 AT3G09000.1 44.321 361 159 12 25 365 184 522 1.21e-54 188
Msa1108440 AT5G01280.3 38.255 298 137 11 41 321 159 426 3.93e-31 123
Msa1108440 AT5G01280.1 38.255 298 137 11 41 321 183 450 5.41e-31 123
Msa1108440 AT5G01280.2 36.296 270 126 10 41 294 159 398 1.25e-21 95.5
Msa1108440 AT2G38160.5 51.899 79 26 1 232 310 149 215 1.92e-19 86.7
Msa1108440 AT2G38160.4 51.899 79 26 1 232 310 146 212 2.18e-19 86.3
Msa1108440 AT2G38160.2 51.899 79 26 1 232 310 237 303 1.22e-18 85.9
Msa1108440 AT2G38160.1 51.899 79 26 1 232 310 237 303 1.22e-18 85.9
Msa1108440 AT2G38160.3 51.899 79 26 1 232 310 243 309 1.41e-18 85.9
Msa1108440 AT2G38160.6 51.899 79 26 1 232 310 243 309 1.41e-18 85.9
Msa1108440 AT3G08670.1 33.574 277 133 12 22 297 226 452 1.91e-12 68.9

Find 102 sgRNAs with CRISPR-Local

Find 264 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCAGTGATTTCTTCAAATT+TGG 0.131377 7_3:+51344816 None:intergenic
GTGACTGAAGCCGGTCTTTC+TGG 0.168874 7_3:+51344795 None:intergenic
TCTGCCAACAACAATTCTTA+TGG 0.262117 7_3:-51344510 Msa1108440:CDS
GTACCACAAACAAGCTTATA+TGG 0.264734 7_3:+51343406 None:intergenic
GCTGATCTTTGAGATGTCTT+AGG 0.272627 7_3:+51345032 None:intergenic
GGACATAAGGCGAAGCGTTC+AGG 0.277796 7_3:-51343814 Msa1108440:CDS
AATAACAACTCCATATCTTA+TGG 0.299251 7_3:-51343648 Msa1108440:CDS
GAAGAAAGCCCTGTTGTAAT+TGG 0.303424 7_3:-51344597 Msa1108440:CDS
CATGCATCAATGTCAAGTTT+TGG 0.314903 7_3:-51345302 None:intergenic
TTCAAAGAAGTCTTTAGATA+TGG 0.326090 7_3:-51344448 Msa1108440:CDS
CGGCTTCAGTCACTAGAAAT+AGG 0.331374 7_3:-51344785 Msa1108440:CDS
AATTCTCTTACTGCCATTAG+TGG 0.332131 7_3:+51345274 None:intergenic
GGTGTTGATGATCGAATATT+AGG 0.367903 7_3:+51345005 None:intergenic
CTACCATTAGCACATTTACT+TGG 0.384068 7_3:+51343485 None:intergenic
AAGATGGTTTATTAATCATC+AGG 0.390441 7_3:-51343597 Msa1108440:three_prime_UTR
AATCTCACTTCCATAAGATA+TGG 0.392247 7_3:+51343638 None:intergenic
TCAACACCATCGAGGACATT+TGG 0.396460 7_3:-51344990 Msa1108440:CDS
CTCGAGGATTTCGTTGTTGA+AGG 0.402723 7_3:+51345185 None:intergenic
ACCGGATTCTTAGCAACAAC+AGG 0.405466 7_3:+51344921 None:intergenic
TCTTATGGAAAATCTTCAAC+TGG 0.414898 7_3:-51344495 Msa1108440:CDS
GGCACAAATAGCACAGATAT+TGG 0.417669 7_3:-51343515 Msa1108440:three_prime_UTR
AAATCTTCAACTGGTAGCTC+TGG 0.425500 7_3:-51344486 Msa1108440:CDS
GCAGAAGGGTCGTTATGCTT+TGG 0.428335 7_3:+51344528 None:intergenic
TCAAGATCTTCAACTCCATC+TGG 0.428365 7_3:-51345221 Msa1108440:CDS
GGTGTTGAGGCCCTCGAAGC+GGG 0.447411 7_3:+51345080 None:intergenic
CCCTGTTGTTGCTAAGAATC+CGG 0.447882 7_3:-51344922 Msa1108440:CDS
AAGAAAGCCCTGTTGTAATT+GGG 0.456329 7_3:-51344596 Msa1108440:CDS
TTTCTCTTATGCAGGACATA+AGG 0.458600 7_3:-51343827 Msa1108440:intron
CTAGCAATACTAAATCTAGA+AGG 0.459081 7_3:-51344722 Msa1108440:CDS
TCGAAAGGACGTGCTTCAGC+CGG 0.461987 7_3:-51344684 Msa1108440:CDS
ATCAGTAAAATCTAGACCTT+GGG 0.464025 7_3:-51344877 Msa1108440:CDS
AGTGATTTCTTCAAATTTGG+AGG 0.472587 7_3:+51344819 None:intergenic
TTCGTTGTTGAAGGTAATGT+TGG 0.480614 7_3:+51345194 None:intergenic
AAACCATATAAGCTTGTTTG+TGG 0.485337 7_3:-51343409 Msa1108440:three_prime_UTR
TGGGAACCCTCACAAATGCC+TGG 0.487952 7_3:-51344858 Msa1108440:CDS
GAAATCACTGCCAGAAAGAC+CGG 0.488516 7_3:-51344805 Msa1108440:CDS
GTTGAAGATCTTGAAGTAGC+TGG 0.488757 7_3:+51345230 None:intergenic
AGATATGGCAATGAGGCATA+TGG 0.489004 7_3:-51344433 Msa1108440:intron
CTCCCACTAGACCCGCTTCG+AGG 0.490759 7_3:-51345091 Msa1108440:CDS
GATCTTGAACTCGGAACTCC+AGG 0.491055 7_3:+51344762 None:intergenic
GGGCCTCAACACCTACTTCA+AGG 0.493592 7_3:-51345070 Msa1108440:CDS
TAAGAATTGTTGTTGGCAGA+AGG 0.499126 7_3:+51344513 None:intergenic
GGCATTTGTGAGGGTTCCCA+AGG 0.499483 7_3:+51344861 None:intergenic
CATCAGTAAAATCTAGACCT+TGG 0.501265 7_3:-51344878 Msa1108440:CDS
CGAAAGGACGTGCTTCAGCC+GGG 0.507353 7_3:-51344683 Msa1108440:CDS
TCTATGTACAGTGTGAGATC+AGG 0.512316 7_3:-51343753 Msa1108440:CDS
TCCCACTAGACCCGCTTCGA+GGG 0.513001 7_3:-51345090 Msa1108440:CDS
GGCCCGCGAGGTAGGTGTAG+AGG 0.519439 7_3:+51345160 None:intergenic
GCAGTGCTGCTTGTGGCATG+TGG 0.519683 7_3:+51343690 None:intergenic
TAAGAGAATTTCTTCGTCAA+GGG 0.521003 7_3:-51345261 Msa1108440:CDS
ATACCAAGTAAATGTGCTAA+TGG 0.525081 7_3:-51343488 Msa1108440:three_prime_UTR
CAGGTAGTTCATCTAAGAGC+AGG 0.527623 7_3:-51343734 Msa1108440:CDS
TCAACTGGTAGCTCTGGATT+CGG 0.527784 7_3:-51344480 Msa1108440:CDS
AGTAGAGCTCGTTTCACCGA+TGG 0.531330 7_3:-51344624 Msa1108440:CDS
GAAGGGTCGTTATGCTTTGG+TGG 0.538364 7_3:+51344531 None:intergenic
GTAAGAGAATTTCTTCGTCA+AGG 0.539407 7_3:-51345262 Msa1108440:CDS
AGATGTCTTAGGAGCTGTCA+AGG 0.549310 7_3:+51345043 None:intergenic
AATCATCAGGACTCATATGA+TGG 0.550432 7_3:-51343584 Msa1108440:three_prime_UTR
GCTTGTGGCATGTGGCGAAT+CGG 0.550591 7_3:+51343698 None:intergenic
AAGAATTGTTGTTGGCAGAA+GGG 0.552747 7_3:+51344514 None:intergenic
CTATTTCTAGTGACTGAAGC+CGG 0.554548 7_3:+51344786 None:intergenic
GATCTTGAAGTAGCTGGAGA+TGG 0.559705 7_3:+51345236 None:intergenic
TCAGTCACTAGAAATAGGCC+TGG 0.563266 7_3:-51344780 Msa1108440:CDS
GGAGCGTCATGAGTAAATCC+AGG 0.565846 7_3:+51344840 None:intergenic
GCTGACGAAGGTCGAGTAGG+AGG 0.567753 7_3:+51344957 None:intergenic
GTTAACGTGGCCCGCGAGGT+AGG 0.568830 7_3:+51345152 None:intergenic
GGTAATGTTGGCCTTCCAGA+TGG 0.569687 7_3:+51345206 None:intergenic
AGGGCTTTCTTCATCACCAT+CGG 0.572486 7_3:+51344608 None:intergenic
AGAGCTAGCAGTGCTGCTTG+TGG 0.573611 7_3:+51343683 None:intergenic
GCTGAAGCACGTCCTTTCGA+AGG 0.575844 7_3:+51344687 None:intergenic
GTGGGAGTTGATGATCTCAC+TGG 0.580848 7_3:+51345107 None:intergenic
GTCTTAGGAGCTGTCAAGGA+AGG 0.581857 7_3:+51345047 None:intergenic
AAAGTTCATAAAATGTCTCA+AGG 0.590036 7_3:+51343440 None:intergenic
ATGATTATTGTGAGTAAACC+CGG 0.590351 7_3:+51344665 None:intergenic
AAGAGAATTTCTTCGTCAAG+GGG 0.598036 7_3:-51345260 Msa1108440:CDS
TTCAAGATCAGCTTCTGTTG+AGG 0.600510 7_3:-51344748 Msa1108440:CDS
GTCAAGGAAGGCCTTGAAGT+AGG 0.613064 7_3:+51345059 None:intergenic
GAGATGCCACGTGACTGCAC+CGG 0.615862 7_3:+51344903 None:intergenic
AGTAAATCCAGGCATTTGTG+AGG 0.616022 7_3:+51344851 None:intergenic
CAGGACTCATATGATGGTCA+AGG 0.616126 7_3:-51343578 Msa1108440:three_prime_UTR
ACACTGTACATAGACGAAGC+TGG 0.618965 7_3:+51343762 None:intergenic
GATGCTGACGAAGGTCGAGT+AGG 0.625399 7_3:+51344954 None:intergenic
GATCTTCAACTCCATCTGGA+AGG 0.627133 7_3:-51345217 Msa1108440:CDS
CAGTCCAACACACCTTCGAA+AGG 0.628165 7_3:-51344699 Msa1108440:CDS
GTAAATCCAGGCATTTGTGA+GGG 0.628865 7_3:+51344852 None:intergenic
GCTGGAATGCTTGTCACGTG+TGG 0.629743 7_3:+51343780 None:intergenic
ACGTCCTTTCGAAGGTGTGT+TGG 0.630372 7_3:+51344695 None:intergenic
GATACTCCAAATGTCCTCGA+TGG 0.633320 7_3:+51344984 None:intergenic
GGCCCTCTACACCTACCTCG+CGG 0.638423 7_3:-51345163 Msa1108440:CDS
AAGAATCCGGTGCAGTCACG+TGG 0.640150 7_3:-51344909 Msa1108440:CDS
ACAGAAGCTGATCTTGAACT+CGG 0.650028 7_3:+51344753 None:intergenic
AGGCCTTGAAGTAGGTGTTG+AGG 0.654755 7_3:+51345067 None:intergenic
GGAGTTGATGATCTCACTGG+TGG 0.658546 7_3:+51345110 None:intergenic
AGGTGTTGAGGCCCTCGAAG+CGG 0.665966 7_3:+51345079 None:intergenic
CCGGATTCTTAGCAACAACA+GGG 0.684742 7_3:+51344922 None:intergenic
AGTCTTTAGATATGGCAATG+AGG 0.692928 7_3:-51344440 Msa1108440:CDS
AGAAGTTAACGTGGCCCGCG+AGG 0.710789 7_3:+51345148 None:intergenic
TGACTTCGTAGAAGTTAACG+TGG 0.714018 7_3:+51345139 None:intergenic
GGTAGGTGTAGAGGGCCTCG+AGG 0.716428 7_3:+51345169 None:intergenic
TTCGATCATCAACACCATCG+AGG 0.723170 7_3:-51344998 Msa1108440:CDS
GAAGCGTTCAGGGTAATATG+CGG 0.727762 7_3:-51343803 Msa1108440:CDS
CTTCAACAACGAAATCCTCG+AGG 0.762249 7_3:-51345184 Msa1108440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAACGAGTATAATCTATTT+AGG - chr7_3:51344342-51344361 Msa1108440:intron 20.0%
!! TAACGAGTATAATCTATTTA+GGG - chr7_3:51344343-51344362 Msa1108440:intron 20.0%
!!! TTTTTTCATATGCTTAAACT+TGG - chr7_3:51344377-51344396 Msa1108440:intron 20.0%
!!! AGAAAATGATTTTTAGAAGA+TGG - chr7_3:51345076-51345095 Msa1108440:CDS 20.0%
!!! TTTGCTATTTTATTTGTATG+TGG - chr7_3:51345150-51345169 Msa1108440:CDS 20.0%
!! TTAACGAGTATAATCTATTT+AGG - chr7_3:51344342-51344361 Msa1108440:intron 20.0%
!! TAACGAGTATAATCTATTTA+GGG - chr7_3:51344343-51344362 Msa1108440:intron 20.0%
!!! TTTTTTCATATGCTTAAACT+TGG - chr7_3:51344377-51344396 Msa1108440:intron 20.0%
!!! AGAAAATGATTTTTAGAAGA+TGG - chr7_3:51345076-51345095 Msa1108440:CDS 20.0%
!!! TTTGCTATTTTATTTGTATG+TGG - chr7_3:51345150-51345169 Msa1108440:CDS 20.0%
!! TTTTCCATAAGAATTGTTGT+TGG + chr7_3:51344186-51344205 None:intergenic 25.0%
! TTCAAAGAAGTCTTTAGATA+TGG - chr7_3:51344241-51344260 Msa1108440:intron 25.0%
!!! AGTTATTTCTATGCTCTATA+TGG - chr7_3:51344436-51344455 Msa1108440:CDS 25.0%
! TAGTAATTTAGAGAACAAGT+AGG + chr7_3:51344492-51344511 None:intergenic 25.0%
! TCTCTAAATTACTAGAATGA+TGG - chr7_3:51344498-51344517 Msa1108440:CDS 25.0%
! GAGTAAAAGATAGAATAGAA+AGG - chr7_3:51344550-51344569 Msa1108440:CDS 25.0%
!!! GTAACTTGTTTACTATGAAA+AGG + chr7_3:51344829-51344848 None:intergenic 25.0%
! AATAACAACTCCATATCTTA+TGG - chr7_3:51345041-51345060 Msa1108440:CDS 25.0%
! AAGATGGTTTATTAATCATC+AGG - chr7_3:51345092-51345111 Msa1108440:CDS 25.0%
! AAAGTTCATAAAATGTCTCA+AGG + chr7_3:51345252-51345271 None:intergenic 25.0%
!!! CATTTTATGAACTTTGTTGT+AGG - chr7_3:51345257-51345276 Msa1108440:CDS 25.0%
!! TTTTCCATAAGAATTGTTGT+TGG + chr7_3:51344186-51344205 None:intergenic 25.0%
! TTCAAAGAAGTCTTTAGATA+TGG - chr7_3:51344241-51344260 Msa1108440:intron 25.0%
!!! AGTTATTTCTATGCTCTATA+TGG - chr7_3:51344436-51344455 Msa1108440:CDS 25.0%
! TAGTAATTTAGAGAACAAGT+AGG + chr7_3:51344492-51344511 None:intergenic 25.0%
! TCTCTAAATTACTAGAATGA+TGG - chr7_3:51344498-51344517 Msa1108440:CDS 25.0%
! GAGTAAAAGATAGAATAGAA+AGG - chr7_3:51344550-51344569 Msa1108440:CDS 25.0%
!!! GTAACTTGTTTACTATGAAA+AGG + chr7_3:51344829-51344848 None:intergenic 25.0%
! AATAACAACTCCATATCTTA+TGG - chr7_3:51345041-51345060 Msa1108440:CDS 25.0%
! AAGATGGTTTATTAATCATC+AGG - chr7_3:51345092-51345111 Msa1108440:CDS 25.0%
! AAAGTTCATAAAATGTCTCA+AGG + chr7_3:51345252-51345271 None:intergenic 25.0%
!!! CATTTTATGAACTTTGTTGT+AGG - chr7_3:51345257-51345276 Msa1108440:CDS 25.0%
TAAGAGAATTTCTTCGTCAA+GGG - chr7_3:51343428-51343447 Msa1108440:three_prime_UTR 30.0%
ATCAGTAAAATCTAGACCTT+GGG - chr7_3:51343812-51343831 Msa1108440:CDS 30.0%
AGTGATTTCTTCAAATTTGG+AGG + chr7_3:51343873-51343892 None:intergenic 30.0%
CTAGCAATACTAAATCTAGA+AGG - chr7_3:51343967-51343986 Msa1108440:intron 30.0%
ATGATTATTGTGAGTAAACC+CGG + chr7_3:51344027-51344046 None:intergenic 30.0%
! TTTTTGTCCCAATTACAACA+GGG + chr7_3:51344103-51344122 None:intergenic 30.0%
! ATTTTTGTCCCAATTACAAC+AGG + chr7_3:51344104-51344123 None:intergenic 30.0%
TGTTGTAATTGGGACAAAAA+TGG - chr7_3:51344103-51344122 Msa1108440:intron 30.0%
TCTTATGGAAAATCTTCAAC+TGG - chr7_3:51344194-51344213 Msa1108440:intron 30.0%
TACAAAATCAGTAGTGTTGT+AGG + chr7_3:51344315-51344334 None:intergenic 30.0%
GTATACTTCCTTGAAGTAAA+AGG - chr7_3:51344399-51344418 Msa1108440:intron 30.0%
! GTTATTTGCCTTTTACTTCA+AGG + chr7_3:51344410-51344429 None:intergenic 30.0%
TATGGTAATAACAGAGGAAA+TGG - chr7_3:51344454-51344473 Msa1108440:CDS 30.0%
AATCTCACTTCCATAAGATA+TGG + chr7_3:51345054-51345073 None:intergenic 30.0%
!! GCTATTTTATTTGTATGTGG+TGG - chr7_3:51345153-51345172 Msa1108440:CDS 30.0%
ATACCAAGTAAATGTGCTAA+TGG - chr7_3:51345201-51345220 Msa1108440:CDS 30.0%
! AAACCATATAAGCTTGTTTG+TGG - chr7_3:51345280-51345299 Msa1108440:CDS 30.0%
TAAGAGAATTTCTTCGTCAA+GGG - chr7_3:51343428-51343447 Msa1108440:three_prime_UTR 30.0%
ATCAGTAAAATCTAGACCTT+GGG - chr7_3:51343812-51343831 Msa1108440:CDS 30.0%
AGTGATTTCTTCAAATTTGG+AGG + chr7_3:51343873-51343892 None:intergenic 30.0%
CTAGCAATACTAAATCTAGA+AGG - chr7_3:51343967-51343986 Msa1108440:intron 30.0%
ATGATTATTGTGAGTAAACC+CGG + chr7_3:51344027-51344046 None:intergenic 30.0%
! TTTTTGTCCCAATTACAACA+GGG + chr7_3:51344103-51344122 None:intergenic 30.0%
! ATTTTTGTCCCAATTACAAC+AGG + chr7_3:51344104-51344123 None:intergenic 30.0%
TGTTGTAATTGGGACAAAAA+TGG - chr7_3:51344103-51344122 Msa1108440:intron 30.0%
TCTTATGGAAAATCTTCAAC+TGG - chr7_3:51344194-51344213 Msa1108440:intron 30.0%
TACAAAATCAGTAGTGTTGT+AGG + chr7_3:51344315-51344334 None:intergenic 30.0%
GTATACTTCCTTGAAGTAAA+AGG - chr7_3:51344399-51344418 Msa1108440:intron 30.0%
! GTTATTTGCCTTTTACTTCA+AGG + chr7_3:51344410-51344429 None:intergenic 30.0%
TATGGTAATAACAGAGGAAA+TGG - chr7_3:51344454-51344473 Msa1108440:CDS 30.0%
AATCTCACTTCCATAAGATA+TGG + chr7_3:51345054-51345073 None:intergenic 30.0%
!! GCTATTTTATTTGTATGTGG+TGG - chr7_3:51345153-51345172 Msa1108440:CDS 30.0%
ATACCAAGTAAATGTGCTAA+TGG - chr7_3:51345201-51345220 Msa1108440:CDS 30.0%
! AAACCATATAAGCTTGTTTG+TGG - chr7_3:51345280-51345299 Msa1108440:CDS 30.0%
!!! AGTTTTGGTTCTTCCACTAA+TGG - chr7_3:51343402-51343421 Msa1108440:three_prime_UTR 35.0%
AATTCTCTTACTGCCATTAG+TGG + chr7_3:51343418-51343437 None:intergenic 35.0%
GTAAGAGAATTTCTTCGTCA+AGG - chr7_3:51343427-51343446 Msa1108440:three_prime_UTR 35.0%
AAGAGAATTTCTTCGTCAAG+GGG - chr7_3:51343429-51343448 Msa1108440:three_prime_UTR 35.0%
TTCGTTGTTGAAGGTAATGT+TGG + chr7_3:51343498-51343517 None:intergenic 35.0%
!! GGTGTTGATGATCGAATATT+AGG + chr7_3:51343687-51343706 None:intergenic 35.0%
! CAAGGTCTAGATTTTACTGA+TGG + chr7_3:51343813-51343832 None:intergenic 35.0%
CATCAGTAAAATCTAGACCT+TGG - chr7_3:51343811-51343830 Msa1108440:CDS 35.0%
GGCAGTGATTTCTTCAAATT+TGG + chr7_3:51343876-51343895 None:intergenic 35.0%
AAGAAAGCCCTGTTGTAATT+GGG - chr7_3:51344093-51344112 Msa1108440:intron 35.0%
! AAGAATTGTTGTTGGCAGAA+GGG + chr7_3:51344178-51344197 None:intergenic 35.0%
! TAAGAATTGTTGTTGGCAGA+AGG + chr7_3:51344179-51344198 None:intergenic 35.0%
TCTGCCAACAACAATTCTTA+TGG - chr7_3:51344179-51344198 Msa1108440:intron 35.0%
AGTCTTTAGATATGGCAATG+AGG - chr7_3:51344249-51344268 Msa1108440:intron 35.0%
GCTCTATATGGTAATAACAG+AGG - chr7_3:51344448-51344467 Msa1108440:CDS 35.0%
!! GTTGATGATTTCTCTTATGC+AGG - chr7_3:51344854-51344873 Msa1108440:CDS 35.0%
TTTCTCTTATGCAGGACATA+AGG - chr7_3:51344862-51344881 Msa1108440:CDS 35.0%
AATCATCAGGACTCATATGA+TGG - chr7_3:51345105-51345124 Msa1108440:CDS 35.0%
CTACCATTAGCACATTTACT+TGG + chr7_3:51345207-51345226 None:intergenic 35.0%
GTACCACAAACAAGCTTATA+TGG + chr7_3:51345286-51345305 None:intergenic 35.0%
!!! AGTTTTGGTTCTTCCACTAA+TGG - chr7_3:51343402-51343421 Msa1108440:three_prime_UTR 35.0%
AATTCTCTTACTGCCATTAG+TGG + chr7_3:51343418-51343437 None:intergenic 35.0%
GTAAGAGAATTTCTTCGTCA+AGG - chr7_3:51343427-51343446 Msa1108440:three_prime_UTR 35.0%
AAGAGAATTTCTTCGTCAAG+GGG - chr7_3:51343429-51343448 Msa1108440:three_prime_UTR 35.0%
TTCGTTGTTGAAGGTAATGT+TGG + chr7_3:51343498-51343517 None:intergenic 35.0%
!! GGTGTTGATGATCGAATATT+AGG + chr7_3:51343687-51343706 None:intergenic 35.0%
! CAAGGTCTAGATTTTACTGA+TGG + chr7_3:51343813-51343832 None:intergenic 35.0%
CATCAGTAAAATCTAGACCT+TGG - chr7_3:51343811-51343830 Msa1108440:CDS 35.0%
GGCAGTGATTTCTTCAAATT+TGG + chr7_3:51343876-51343895 None:intergenic 35.0%
AAGAAAGCCCTGTTGTAATT+GGG - chr7_3:51344093-51344112 Msa1108440:intron 35.0%
! AAGAATTGTTGTTGGCAGAA+GGG + chr7_3:51344178-51344197 None:intergenic 35.0%
! TAAGAATTGTTGTTGGCAGA+AGG + chr7_3:51344179-51344198 None:intergenic 35.0%
TCTGCCAACAACAATTCTTA+TGG - chr7_3:51344179-51344198 Msa1108440:intron 35.0%
AGTCTTTAGATATGGCAATG+AGG - chr7_3:51344249-51344268 Msa1108440:intron 35.0%
GCTCTATATGGTAATAACAG+AGG - chr7_3:51344448-51344467 Msa1108440:CDS 35.0%
!! GTTGATGATTTCTCTTATGC+AGG - chr7_3:51344854-51344873 Msa1108440:CDS 35.0%
TTTCTCTTATGCAGGACATA+AGG - chr7_3:51344862-51344881 Msa1108440:CDS 35.0%
AATCATCAGGACTCATATGA+TGG - chr7_3:51345105-51345124 Msa1108440:CDS 35.0%
CTACCATTAGCACATTTACT+TGG + chr7_3:51345207-51345226 None:intergenic 35.0%
GTACCACAAACAAGCTTATA+TGG + chr7_3:51345286-51345305 None:intergenic 35.0%
GTTGAAGATCTTGAAGTAGC+TGG + chr7_3:51343462-51343481 None:intergenic 40.0%
TCAAGATCTTCAACTCCATC+TGG - chr7_3:51343468-51343487 Msa1108440:three_prime_UTR 40.0%
TGACTTCGTAGAAGTTAACG+TGG + chr7_3:51343553-51343572 None:intergenic 40.0%
!! GCTGATCTTTGAGATGTCTT+AGG + chr7_3:51343660-51343679 None:intergenic 40.0%
GTAAATCCAGGCATTTGTGA+GGG + chr7_3:51343840-51343859 None:intergenic 40.0%
AGTAAATCCAGGCATTTGTG+AGG + chr7_3:51343841-51343860 None:intergenic 40.0%
!! CTATTTCTAGTGACTGAAGC+CGG + chr7_3:51343906-51343925 None:intergenic 40.0%
ACAGAAGCTGATCTTGAACT+CGG + chr7_3:51343939-51343958 None:intergenic 40.0%
TTCAAGATCAGCTTCTGTTG+AGG - chr7_3:51343941-51343960 Msa1108440:intron 40.0%
GAAGAAAGCCCTGTTGTAAT+TGG - chr7_3:51344092-51344111 Msa1108440:intron 40.0%
AAATCTTCAACTGGTAGCTC+TGG - chr7_3:51344203-51344222 Msa1108440:intron 40.0%
AGATATGGCAATGAGGCATA+TGG - chr7_3:51344256-51344275 Msa1108440:intron 40.0%
TTAGAGAACAAGTAGGAGCA+TGG + chr7_3:51344485-51344504 None:intergenic 40.0%
TCTATGTACAGTGTGAGATC+AGG - chr7_3:51344936-51344955 Msa1108440:CDS 40.0%
GGCACAAATAGCACAGATAT+TGG - chr7_3:51345174-51345193 Msa1108440:CDS 40.0%
GTTGAAGATCTTGAAGTAGC+TGG + chr7_3:51343462-51343481 None:intergenic 40.0%
TCAAGATCTTCAACTCCATC+TGG - chr7_3:51343468-51343487 Msa1108440:three_prime_UTR 40.0%
TGACTTCGTAGAAGTTAACG+TGG + chr7_3:51343553-51343572 None:intergenic 40.0%
!! GCTGATCTTTGAGATGTCTT+AGG + chr7_3:51343660-51343679 None:intergenic 40.0%
GTAAATCCAGGCATTTGTGA+GGG + chr7_3:51343840-51343859 None:intergenic 40.0%
AGTAAATCCAGGCATTTGTG+AGG + chr7_3:51343841-51343860 None:intergenic 40.0%
!! CTATTTCTAGTGACTGAAGC+CGG + chr7_3:51343906-51343925 None:intergenic 40.0%
ACAGAAGCTGATCTTGAACT+CGG + chr7_3:51343939-51343958 None:intergenic 40.0%
TTCAAGATCAGCTTCTGTTG+AGG - chr7_3:51343941-51343960 Msa1108440:intron 40.0%
GAAGAAAGCCCTGTTGTAAT+TGG - chr7_3:51344092-51344111 Msa1108440:intron 40.0%
AAATCTTCAACTGGTAGCTC+TGG - chr7_3:51344203-51344222 Msa1108440:intron 40.0%
AGATATGGCAATGAGGCATA+TGG - chr7_3:51344256-51344275 Msa1108440:intron 40.0%
TTAGAGAACAAGTAGGAGCA+TGG + chr7_3:51344485-51344504 None:intergenic 40.0%
TCTATGTACAGTGTGAGATC+AGG - chr7_3:51344936-51344955 Msa1108440:CDS 40.0%
GGCACAAATAGCACAGATAT+TGG - chr7_3:51345174-51345193 Msa1108440:CDS 40.0%
GATCTTGAAGTAGCTGGAGA+TGG + chr7_3:51343456-51343475 None:intergenic 45.0%
GATCTTCAACTCCATCTGGA+AGG - chr7_3:51343472-51343491 Msa1108440:three_prime_UTR 45.0%
CTCGAGGATTTCGTTGTTGA+AGG + chr7_3:51343507-51343526 None:intergenic 45.0%
CTTCAACAACGAAATCCTCG+AGG - chr7_3:51343505-51343524 Msa1108440:three_prime_UTR 45.0%
AGATGTCTTAGGAGCTGTCA+AGG + chr7_3:51343649-51343668 None:intergenic 45.0%
TTCGATCATCAACACCATCG+AGG - chr7_3:51343691-51343710 Msa1108440:CDS 45.0%
TCAACACCATCGAGGACATT+TGG - chr7_3:51343699-51343718 Msa1108440:CDS 45.0%
GATACTCCAAATGTCCTCGA+TGG + chr7_3:51343708-51343727 None:intergenic 45.0%
CCGGATTCTTAGCAACAACA+GGG + chr7_3:51343770-51343789 None:intergenic 45.0%
CCCTGTTGTTGCTAAGAATC+CGG - chr7_3:51343767-51343786 Msa1108440:CDS 45.0%
ACCGGATTCTTAGCAACAAC+AGG + chr7_3:51343771-51343790 None:intergenic 45.0%
GAAATCACTGCCAGAAAGAC+CGG - chr7_3:51343884-51343903 Msa1108440:intron 45.0%
CGGCTTCAGTCACTAGAAAT+AGG - chr7_3:51343904-51343923 Msa1108440:intron 45.0%
TCAGTCACTAGAAATAGGCC+TGG - chr7_3:51343909-51343928 Msa1108440:intron 45.0%
AGGGCTTTCTTCATCACCAT+CGG + chr7_3:51344084-51344103 None:intergenic 45.0%
!! TCAACTGGTAGCTCTGGATT+CGG - chr7_3:51344209-51344228 Msa1108440:intron 45.0%
! GAAGCGTTCAGGGTAATATG+CGG - chr7_3:51344886-51344905 Msa1108440:CDS 45.0%
ACACTGTACATAGACGAAGC+TGG + chr7_3:51344930-51344949 None:intergenic 45.0%
CAGGTAGTTCATCTAAGAGC+AGG - chr7_3:51344955-51344974 Msa1108440:CDS 45.0%
CAGGACTCATATGATGGTCA+AGG - chr7_3:51345111-51345130 Msa1108440:CDS 45.0%
GATCTTGAAGTAGCTGGAGA+TGG + chr7_3:51343456-51343475 None:intergenic 45.0%
GATCTTCAACTCCATCTGGA+AGG - chr7_3:51343472-51343491 Msa1108440:three_prime_UTR 45.0%
CTCGAGGATTTCGTTGTTGA+AGG + chr7_3:51343507-51343526 None:intergenic 45.0%
CTTCAACAACGAAATCCTCG+AGG - chr7_3:51343505-51343524 Msa1108440:three_prime_UTR 45.0%
AGATGTCTTAGGAGCTGTCA+AGG + chr7_3:51343649-51343668 None:intergenic 45.0%
TTCGATCATCAACACCATCG+AGG - chr7_3:51343691-51343710 Msa1108440:CDS 45.0%
TCAACACCATCGAGGACATT+TGG - chr7_3:51343699-51343718 Msa1108440:CDS 45.0%
GATACTCCAAATGTCCTCGA+TGG + chr7_3:51343708-51343727 None:intergenic 45.0%
CCGGATTCTTAGCAACAACA+GGG + chr7_3:51343770-51343789 None:intergenic 45.0%
CCCTGTTGTTGCTAAGAATC+CGG - chr7_3:51343767-51343786 Msa1108440:CDS 45.0%
ACCGGATTCTTAGCAACAAC+AGG + chr7_3:51343771-51343790 None:intergenic 45.0%
GAAATCACTGCCAGAAAGAC+CGG - chr7_3:51343884-51343903 Msa1108440:intron 45.0%
CGGCTTCAGTCACTAGAAAT+AGG - chr7_3:51343904-51343923 Msa1108440:intron 45.0%
TCAGTCACTAGAAATAGGCC+TGG - chr7_3:51343909-51343928 Msa1108440:intron 45.0%
AGGGCTTTCTTCATCACCAT+CGG + chr7_3:51344084-51344103 None:intergenic 45.0%
!! TCAACTGGTAGCTCTGGATT+CGG - chr7_3:51344209-51344228 Msa1108440:intron 45.0%
! GAAGCGTTCAGGGTAATATG+CGG - chr7_3:51344886-51344905 Msa1108440:CDS 45.0%
ACACTGTACATAGACGAAGC+TGG + chr7_3:51344930-51344949 None:intergenic 45.0%
CAGGTAGTTCATCTAAGAGC+AGG - chr7_3:51344955-51344974 Msa1108440:CDS 45.0%
CAGGACTCATATGATGGTCA+AGG - chr7_3:51345111-51345130 Msa1108440:CDS 45.0%
!! GGTAATGTTGGCCTTCCAGA+TGG + chr7_3:51343486-51343505 None:intergenic 50.0%
!! GGAGTTGATGATCTCACTGG+TGG + chr7_3:51343582-51343601 None:intergenic 50.0%
!! GTGGGAGTTGATGATCTCAC+TGG + chr7_3:51343585-51343604 None:intergenic 50.0%
! AGGCCTTGAAGTAGGTGTTG+AGG + chr7_3:51343625-51343644 None:intergenic 50.0%
GTCAAGGAAGGCCTTGAAGT+AGG + chr7_3:51343633-51343652 None:intergenic 50.0%
GTCTTAGGAGCTGTCAAGGA+AGG + chr7_3:51343645-51343664 None:intergenic 50.0%
! CGTGCTTTTGATGCTGACGA+AGG + chr7_3:51343747-51343766 None:intergenic 50.0%
! GGAGCGTCATGAGTAAATCC+AGG + chr7_3:51343852-51343871 None:intergenic 50.0%
GATCTTGAACTCGGAACTCC+AGG + chr7_3:51343930-51343949 None:intergenic 50.0%
CAGTCCAACACACCTTCGAA+AGG - chr7_3:51343990-51344009 Msa1108440:intron 50.0%
! ACGTCCTTTCGAAGGTGTGT+TGG + chr7_3:51343997-51344016 None:intergenic 50.0%
AGTAGAGCTCGTTTCACCGA+TGG - chr7_3:51344065-51344084 Msa1108440:intron 50.0%
GAAGGGTCGTTATGCTTTGG+TGG + chr7_3:51344161-51344180 None:intergenic 50.0%
GCAGAAGGGTCGTTATGCTT+TGG + chr7_3:51344164-51344183 None:intergenic 50.0%
! GACATAAGGCGAAGCGTTCA+GGG - chr7_3:51344876-51344895 Msa1108440:CDS 50.0%
!! GGTAATGTTGGCCTTCCAGA+TGG + chr7_3:51343486-51343505 None:intergenic 50.0%
!! GGAGTTGATGATCTCACTGG+TGG + chr7_3:51343582-51343601 None:intergenic 50.0%
!! GTGGGAGTTGATGATCTCAC+TGG + chr7_3:51343585-51343604 None:intergenic 50.0%
! AGGCCTTGAAGTAGGTGTTG+AGG + chr7_3:51343625-51343644 None:intergenic 50.0%
GTCAAGGAAGGCCTTGAAGT+AGG + chr7_3:51343633-51343652 None:intergenic 50.0%
GTCTTAGGAGCTGTCAAGGA+AGG + chr7_3:51343645-51343664 None:intergenic 50.0%
! CGTGCTTTTGATGCTGACGA+AGG + chr7_3:51343747-51343766 None:intergenic 50.0%
! GGAGCGTCATGAGTAAATCC+AGG + chr7_3:51343852-51343871 None:intergenic 50.0%
GATCTTGAACTCGGAACTCC+AGG + chr7_3:51343930-51343949 None:intergenic 50.0%
CAGTCCAACACACCTTCGAA+AGG - chr7_3:51343990-51344009 Msa1108440:intron 50.0%
! ACGTCCTTTCGAAGGTGTGT+TGG + chr7_3:51343997-51344016 None:intergenic 50.0%
AGTAGAGCTCGTTTCACCGA+TGG - chr7_3:51344065-51344084 Msa1108440:intron 50.0%
GAAGGGTCGTTATGCTTTGG+TGG + chr7_3:51344161-51344180 None:intergenic 50.0%
GCAGAAGGGTCGTTATGCTT+TGG + chr7_3:51344164-51344183 None:intergenic 50.0%
! GACATAAGGCGAAGCGTTCA+GGG - chr7_3:51344876-51344895 Msa1108440:CDS 50.0%
GGGCCTCAACACCTACTTCA+AGG - chr7_3:51343619-51343638 Msa1108440:exon 55.0%
GATGCTGACGAAGGTCGAGT+AGG + chr7_3:51343738-51343757 None:intergenic 55.0%
AAGAATCCGGTGCAGTCACG+TGG - chr7_3:51343780-51343799 Msa1108440:CDS 55.0%
GGCATTTGTGAGGGTTCCCA+AGG + chr7_3:51343831-51343850 None:intergenic 55.0%
TGGGAACCCTCACAAATGCC+TGG - chr7_3:51343831-51343850 Msa1108440:intron 55.0%
GTGACTGAAGCCGGTCTTTC+TGG + chr7_3:51343897-51343916 None:intergenic 55.0%
GCTGAAGCACGTCCTTTCGA+AGG + chr7_3:51344005-51344024 None:intergenic 55.0%
TCGAAAGGACGTGCTTCAGC+CGG - chr7_3:51344005-51344024 Msa1108440:intron 55.0%
! GGACATAAGGCGAAGCGTTC+AGG - chr7_3:51344875-51344894 Msa1108440:CDS 55.0%
GCTGGAATGCTTGTCACGTG+TGG + chr7_3:51344912-51344931 None:intergenic 55.0%
GCTTGTGGCATGTGGCGAAT+CGG + chr7_3:51344994-51345013 None:intergenic 55.0%
!! AGAGCTAGCAGTGCTGCTTG+TGG + chr7_3:51345009-51345028 None:intergenic 55.0%
GGGCCTCAACACCTACTTCA+AGG - chr7_3:51343619-51343638 Msa1108440:exon 55.0%
GATGCTGACGAAGGTCGAGT+AGG + chr7_3:51343738-51343757 None:intergenic 55.0%
AAGAATCCGGTGCAGTCACG+TGG - chr7_3:51343780-51343799 Msa1108440:CDS 55.0%
GGCATTTGTGAGGGTTCCCA+AGG + chr7_3:51343831-51343850 None:intergenic 55.0%
TGGGAACCCTCACAAATGCC+TGG - chr7_3:51343831-51343850 Msa1108440:intron 55.0%
GTGACTGAAGCCGGTCTTTC+TGG + chr7_3:51343897-51343916 None:intergenic 55.0%
GCTGAAGCACGTCCTTTCGA+AGG + chr7_3:51344005-51344024 None:intergenic 55.0%
TCGAAAGGACGTGCTTCAGC+CGG - chr7_3:51344005-51344024 Msa1108440:intron 55.0%
! GGACATAAGGCGAAGCGTTC+AGG - chr7_3:51344875-51344894 Msa1108440:CDS 55.0%
GCTGGAATGCTTGTCACGTG+TGG + chr7_3:51344912-51344931 None:intergenic 55.0%
GCTTGTGGCATGTGGCGAAT+CGG + chr7_3:51344994-51345013 None:intergenic 55.0%
!! AGAGCTAGCAGTGCTGCTTG+TGG + chr7_3:51345009-51345028 None:intergenic 55.0%
AGAAGTTAACGTGGCCCGCG+AGG + chr7_3:51343544-51343563 None:intergenic 60.0%
TCCCACTAGACCCGCTTCGA+GGG - chr7_3:51343599-51343618 Msa1108440:three_prime_UTR 60.0%
!! AGGTGTTGAGGCCCTCGAAG+CGG + chr7_3:51343613-51343632 None:intergenic 60.0%
GCTGACGAAGGTCGAGTAGG+AGG + chr7_3:51343735-51343754 None:intergenic 60.0%
GAGATGCCACGTGACTGCAC+CGG + chr7_3:51343789-51343808 None:intergenic 60.0%
CGAAAGGACGTGCTTCAGCC+GGG - chr7_3:51344006-51344025 Msa1108440:intron 60.0%
!! GCAGTGCTGCTTGTGGCATG+TGG + chr7_3:51345002-51345021 None:intergenic 60.0%
AGAAGTTAACGTGGCCCGCG+AGG + chr7_3:51343544-51343563 None:intergenic 60.0%
TCCCACTAGACCCGCTTCGA+GGG - chr7_3:51343599-51343618 Msa1108440:three_prime_UTR 60.0%
!! AGGTGTTGAGGCCCTCGAAG+CGG + chr7_3:51343613-51343632 None:intergenic 60.0%
GCTGACGAAGGTCGAGTAGG+AGG + chr7_3:51343735-51343754 None:intergenic 60.0%
GAGATGCCACGTGACTGCAC+CGG + chr7_3:51343789-51343808 None:intergenic 60.0%
CGAAAGGACGTGCTTCAGCC+GGG - chr7_3:51344006-51344025 Msa1108440:intron 60.0%
!! GCAGTGCTGCTTGTGGCATG+TGG + chr7_3:51345002-51345021 None:intergenic 60.0%
GGTAGGTGTAGAGGGCCTCG+AGG + chr7_3:51343523-51343542 None:intergenic 65.0%
GGCCCTCTACACCTACCTCG+CGG - chr7_3:51343526-51343545 Msa1108440:three_prime_UTR 65.0%
GCCCTCTACACCTACCTCGC+GGG - chr7_3:51343527-51343546 Msa1108440:three_prime_UTR 65.0%
GCCCGCGAGGTAGGTGTAGA+GGG + chr7_3:51343531-51343550 None:intergenic 65.0%
GTTAACGTGGCCCGCGAGGT+AGG + chr7_3:51343540-51343559 None:intergenic 65.0%
CTCCCACTAGACCCGCTTCG+AGG - chr7_3:51343598-51343617 Msa1108440:three_prime_UTR 65.0%
GCCCTCGAAGCGGGTCTAGT+GGG + chr7_3:51343603-51343622 None:intergenic 65.0%
! GGTGTTGAGGCCCTCGAAGC+GGG + chr7_3:51343612-51343631 None:intergenic 65.0%
GGTAGGTGTAGAGGGCCTCG+AGG + chr7_3:51343523-51343542 None:intergenic 65.0%
GGCCCTCTACACCTACCTCG+CGG - chr7_3:51343526-51343545 Msa1108440:three_prime_UTR 65.0%
GCCCTCTACACCTACCTCGC+GGG - chr7_3:51343527-51343546 Msa1108440:three_prime_UTR 65.0%
GCCCGCGAGGTAGGTGTAGA+GGG + chr7_3:51343531-51343550 None:intergenic 65.0%
GTTAACGTGGCCCGCGAGGT+AGG + chr7_3:51343540-51343559 None:intergenic 65.0%
CTCCCACTAGACCCGCTTCG+AGG - chr7_3:51343598-51343617 Msa1108440:three_prime_UTR 65.0%
GCCCTCGAAGCGGGTCTAGT+GGG + chr7_3:51343603-51343622 None:intergenic 65.0%
! GGTGTTGAGGCCCTCGAAGC+GGG + chr7_3:51343612-51343631 None:intergenic 65.0%
GGCCCGCGAGGTAGGTGTAG+AGG + chr7_3:51343532-51343551 None:intergenic 70.0%
GGCCCTCGAAGCGGGTCTAG+TGG + chr7_3:51343604-51343623 None:intergenic 70.0%
GGCCCGCGAGGTAGGTGTAG+AGG + chr7_3:51343532-51343551 None:intergenic 70.0%
GGCCCTCGAAGCGGGTCTAG+TGG + chr7_3:51343604-51343623 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 51343396 51345315 51343396 ID=Msa1108440;Name=Msa1108440
chr7_3 mRNA 51343396 51345315 51343396 ID=Msa1108440-mRNA-1;Parent=Msa1108440;Name=Msa1108440-mRNA-1;_AED=0.35;_eAED=0.35;_QI=0|1|0.5|1|1|1|2|224|365
chr7_3 exon 51343396 51343835 51343396 ID=Msa1108440-mRNA-1:exon:10544;Parent=Msa1108440-mRNA-1
chr7_3 exon 51344434 51345315 51344434 ID=Msa1108440-mRNA-1:exon:10543;Parent=Msa1108440-mRNA-1
chr7_3 CDS 51344434 51345315 51344434 ID=Msa1108440-mRNA-1:cds;Parent=Msa1108440-mRNA-1
chr7_3 CDS 51343620 51343835 51343620 ID=Msa1108440-mRNA-1:cds;Parent=Msa1108440-mRNA-1
chr7_3 three_prime_UTR 51343396 51343619 51343396 ID=Msa1108440-mRNA-1:three_prime_utr;Parent=Msa1108440-mRNA-1
Gene Sequence

>Msa1108440

ATGTCAAGTTTTGGTTCTTCCACTAATGGCAGTAAGAGAATTTCTTCGTCAAGGGGTCCATCTCCAGCTACTTCAAGATCTTCAACTCCATCTGGAAGGCCAACATTACCTTCAACAACGAAATCCTCGAGGCCCTCTACACCTACCTCGCGGGCCACGTTAACTTCTACGAAGTCAACAGCTCCACCAGTGAGATCATCAACTCCCACTAGACCCGCTTCGAGGGCCTCAACACCTACTTCAAGGCCTTCCTTGACAGCTCCTAAGACATCTCAAAGATCAGCAACTCCTAATATTCGATCATCAACACCATCGAGGACATTTGGAGTATCTGCTCCTCCTACTCGACCTTCGTCAGCATCAAAAGCACGCCCTGTTGTTGCTAAGAATCCGGTGCAGTCACGTGGCATCTCTCCATCAGTAAAATCTAGACCTTGGGAACCCTCACAAATGCCTGGATTTACTCATGACGCTCCTCCAAATTTGAAGAAATCACTGCCAGAAAGACCGGCTTCAGTCACTAGAAATAGGCCTGGAGTTCCGAGTTCAAGATCAGCTTCTGTTGAGGCGACTAGCAATACTAAATCTAGAAGGCAGTCCAACACACCTTCGAAAGGACGTGCTTCAGCCGGGTTTACTCACAATAATCATAGCTCATTGCATGCTTTGAGTAGAGCTCGTTTCACCGATGGTGATGAAGAAAGCCCTGTTGTAATTGGGACAAAAATGGTCGAAAGAGTAGTAAACATGAGAAAACTTGCACCACCAAAGCATAACGACCCTTCTGCCAACAACAATTCTTATGGAAAATCTTCAACTGGTAGCTCTGGATTCGGAAGTACGCTTTCAAAGAAGTCTTTAGATATGGCAATGAGGCATATGGACATAAGGCGAAGCGTTCAGGGTAATATGCGGCCACACGTGACAAGCATTCCAGCTTCGTCTATGTACAGTGTGAGATCAGGTAGTTCATCTAAGAGCAGGACAATGAGTTTTTCCGATTCGCCACATGCCACAAGCAGCACTGCTAGCTCTGAACTAAGTGTAAATAACAACTCCATATCTTATGGAAGTGAGATTGAAGAAAATGATTTTTAG
Protein sequence

>Msa1108440

MSSFGSSTNGSKRISSSRGPSPATSRSSTPSGRPTLPSTTKSSRPSTPTSRATLTSTKSTAPPVRSSTPTRPASRASTPTSRPSLTAPKTSQRSATPNIRSSTPSRTFGVSAPPTRPSSASKARPVVAKNPVQSRGISPSVKSRPWEPSQMPGFTHDAPPNLKKSLPERPASVTRNRPGVPSSRSASVEATSNTKSRRQSNTPSKGRASAGFTHNNHSSLHALSRARFTDGDEESPVVIGTKMVERVVNMRKLAPPKHNDPSANNNSYGKSSTGSSGFGSTLSKKSLDMAMRHMDIRRSVQGNMRPHVTSIPASSMYSVRSGSSSKSRTMSFSDSPHATSSTASSELSVNNNSISYGSEIEENDF*