Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152220 | XP_003623288.1 | 92.063 | 504 | 13 | 4 | 1 | 478 | 1 | 503 | 0.0 | 832 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152220 | G7KS85 | 92.063 | 504 | 13 | 4 | 1 | 478 | 1 | 503 | 0.0 | 887 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1064070 | Msa1152220 | 0.808274 | 3.357207e-50 | -8.615850e-47 |
| Msa1108440 | Msa1152220 | 0.987661 | 4.525068e-171 | -8.615850e-47 |
| Msa1108450 | Msa1152220 | 0.990757 | 3.567330e-184 | -8.615850e-47 |
| Msa1152220 | Msa1170240 | 0.992485 | 1.424521e-193 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152220 | MtrunA17_Chr7g0242211 | 92.063 | 504 | 13 | 4 | 1 | 478 | 1 | 503 | 0.0 | 887 |
| Msa1152220 | MtrunA17_Chr3g0113271 | 44.881 | 586 | 202 | 17 | 5 | 475 | 32 | 611 | 5.24e-121 | 367 |
| Msa1152220 | MtrunA17_Chr5g0436961 | 43.783 | 571 | 215 | 19 | 6 | 478 | 38 | 600 | 1.26e-109 | 337 |
| Msa1152220 | MtrunA17_Chr3g0122841 | 31.590 | 478 | 243 | 17 | 1 | 459 | 30 | 442 | 7.45e-28 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152220 | AT2G40070.1 | 45.455 | 572 | 209 | 17 | 2 | 477 | 27 | 591 | 1.11e-113 | 348 |
| Msa1152220 | AT2G40070.2 | 45.161 | 558 | 203 | 18 | 16 | 477 | 1 | 551 | 3.12e-104 | 322 |
| Msa1152220 | AT2G40070.3 | 52.083 | 336 | 141 | 10 | 161 | 477 | 140 | 474 | 1.46e-80 | 258 |
| Msa1152220 | AT3G09000.1 | 41.636 | 538 | 238 | 17 | 1 | 478 | 1 | 522 | 1.28e-78 | 255 |
| Msa1152220 | AT5G01280.1 | 37.966 | 295 | 133 | 12 | 163 | 434 | 183 | 450 | 6.41e-30 | 122 |
| Msa1152220 | AT5G01280.3 | 37.966 | 295 | 133 | 12 | 163 | 434 | 159 | 426 | 7.48e-30 | 122 |
| Msa1152220 | AT1G27850.1 | 30.361 | 471 | 216 | 19 | 1 | 443 | 30 | 416 | 1.39e-25 | 111 |
| Msa1152220 | AT5G01280.2 | 35.955 | 267 | 122 | 11 | 163 | 407 | 159 | 398 | 1.35e-20 | 94.0 |
| Msa1152220 | AT2G38160.5 | 51.899 | 79 | 26 | 1 | 345 | 423 | 149 | 215 | 1.24e-18 | 85.1 |
| Msa1152220 | AT2G38160.4 | 51.899 | 79 | 26 | 1 | 345 | 423 | 146 | 212 | 1.25e-18 | 85.1 |
| Msa1152220 | AT2G38160.2 | 51.899 | 79 | 26 | 1 | 345 | 423 | 237 | 303 | 5.88e-18 | 85.1 |
| Msa1152220 | AT2G38160.2 | 37.097 | 186 | 86 | 7 | 1 | 182 | 5 | 163 | 1.52e-16 | 80.9 |
| Msa1152220 | AT2G38160.1 | 51.899 | 79 | 26 | 1 | 345 | 423 | 237 | 303 | 5.88e-18 | 85.1 |
| Msa1152220 | AT2G38160.1 | 37.097 | 186 | 86 | 7 | 1 | 182 | 5 | 163 | 1.52e-16 | 80.9 |
| Msa1152220 | AT2G38160.3 | 51.899 | 79 | 26 | 1 | 345 | 423 | 243 | 309 | 6.90e-18 | 85.1 |
| Msa1152220 | AT2G38160.3 | 37.186 | 199 | 90 | 7 | 1 | 181 | 5 | 186 | 3.25e-16 | 80.1 |
| Msa1152220 | AT2G38160.6 | 51.899 | 79 | 26 | 1 | 345 | 423 | 243 | 309 | 6.90e-18 | 85.1 |
| Msa1152220 | AT2G38160.6 | 37.186 | 199 | 90 | 7 | 1 | 181 | 5 | 186 | 3.25e-16 | 80.1 |
| Msa1152220 | AT3G08670.1 | 33.582 | 268 | 136 | 10 | 144 | 410 | 226 | 452 | 8.40e-15 | 77.4 |
Find 130 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAGTGATTTCTTCAAATT+TGG | 0.131377 | 7_4:+37487404 | None:intergenic |
| GTGACTGAAGCCGGTCTTTC+TGG | 0.168874 | 7_4:+37487383 | None:intergenic |
| TTCTTGAACCAGGTTCTATT+TGG | 0.244805 | 7_4:+37487933 | None:intergenic |
| TCTTCAACCACAGTCTTCTT+TGG | 0.262105 | 7_4:+37489582 | None:intergenic |
| TCTGCCAACAACAATTCTTA+TGG | 0.262117 | 7_4:-37487098 | Msa1152220:CDS |
| GTACCACAAACAAGCTTATA+TGG | 0.264734 | 7_4:+37485994 | None:intergenic |
| GCTGATCTTTGAGATGTCTT+AGG | 0.272627 | 7_4:+37487620 | None:intergenic |
| GGACATAAGGCGAAGCGTTC+AGG | 0.277796 | 7_4:-37486402 | Msa1152220:CDS |
| AATAACAACTCCATATCTTA+TGG | 0.299251 | 7_4:-37486236 | Msa1152220:CDS |
| GAAGAAAGCCCTGTTGTAAT+TGG | 0.303424 | 7_4:-37487185 | Msa1152220:CDS |
| GAATGATGATTGATGAATAT+TGG | 0.313653 | 7_4:+37490212 | None:intergenic |
| CATGCATCAATGTCAAGTTT+TGG | 0.314903 | 7_4:-37487890 | Msa1152220:CDS |
| TTCAAAGAAGTCTTTAGATA+TGG | 0.326090 | 7_4:-37487036 | Msa1152220:CDS |
| CGGCTTCAGTCACTAGAAAT+AGG | 0.331374 | 7_4:-37487373 | Msa1152220:CDS |
| AATTCTCTTACTGCCATTAG+TGG | 0.332131 | 7_4:+37487862 | None:intergenic |
| GGTGTTGATGATCGAATATT+AGG | 0.367903 | 7_4:+37487593 | None:intergenic |
| CTACCATTAGCACATTTACT+TGG | 0.384068 | 7_4:+37486073 | None:intergenic |
| AAGATGGTTTATTAATCATC+AGG | 0.390441 | 7_4:-37486185 | Msa1152220:three_prime_UTR |
| AATCTCACTTCCATAAGATA+TGG | 0.392247 | 7_4:+37486226 | None:intergenic |
| TCAACACCATCGAGGACATT+TGG | 0.396460 | 7_4:-37487578 | Msa1152220:CDS |
| CTCGAGGATTTCGTTGTTGA+AGG | 0.402723 | 7_4:+37487773 | None:intergenic |
| ACCGGATTCTTAGCAACAAC+AGG | 0.405466 | 7_4:+37487509 | None:intergenic |
| TATGTGAAACTTTGTCTTGT+TGG | 0.414526 | 7_4:+37490267 | None:intergenic |
| TCTTATGGAAAATCTTCAAC+TGG | 0.414898 | 7_4:-37487083 | Msa1152220:CDS |
| GGCACAAATAGCACAGATAT+TGG | 0.417669 | 7_4:-37486103 | Msa1152220:three_prime_UTR |
| ATCACATTTCAACTCATTGA+AGG | 0.424742 | 7_4:-37490071 | Msa1152220:intron |
| AAATCTTCAACTGGTAGCTC+TGG | 0.425500 | 7_4:-37487074 | Msa1152220:CDS |
| TCAACCACAGTCTTCTTTGG+TGG | 0.427459 | 7_4:+37489585 | None:intergenic |
| GCAGAAGGGTCGTTATGCTT+TGG | 0.428335 | 7_4:+37487116 | None:intergenic |
| TCAAGATCTTCAACTCCATC+TGG | 0.428365 | 7_4:-37487809 | Msa1152220:CDS |
| GGTGTTGAGGCCCTCGAAGC+GGG | 0.447411 | 7_4:+37487668 | None:intergenic |
| CCCTGTTGTTGCTAAGAATC+CGG | 0.447882 | 7_4:-37487510 | Msa1152220:intron |
| GAACTTGATTTGTCCAACTT+AGG | 0.455464 | 7_4:-37489740 | Msa1152220:intron |
| AAGAAAGCCCTGTTGTAATT+GGG | 0.456329 | 7_4:-37487184 | Msa1152220:CDS |
| TTTCTCTTATGCAGGACATA+AGG | 0.458600 | 7_4:-37486415 | Msa1152220:intron |
| CTAGCAATACTAAATCTAGA+AGG | 0.459081 | 7_4:-37487310 | Msa1152220:CDS |
| TCGAAAGGACGTGCTTCAGC+CGG | 0.461987 | 7_4:-37487272 | Msa1152220:CDS |
| ATCAGTAAAATCTAGACCTT+GGG | 0.464025 | 7_4:-37487465 | Msa1152220:CDS |
| AGAGAAGGTAATGGTGATGA+AGG | 0.465683 | 7_4:-37489855 | Msa1152220:exon |
| AGTGATTTCTTCAAATTTGG+AGG | 0.472587 | 7_4:+37487407 | None:intergenic |
| AAACTCTATGATTTCAAAGA+TGG | 0.474261 | 7_4:-37489619 | Msa1152220:CDS |
| TTCGTTGTTGAAGGTAATGT+TGG | 0.480614 | 7_4:+37487782 | None:intergenic |
| TGTGTTTCCTTGTCTAAAGT+AGG | 0.481105 | 7_4:+37488350 | None:intergenic |
| AAACCATATAAGCTTGTTTG+TGG | 0.485337 | 7_4:-37485997 | Msa1152220:three_prime_UTR |
| TGGGAACCCTCACAAATGCC+TGG | 0.487952 | 7_4:-37487446 | Msa1152220:CDS |
| GAAATCACTGCCAGAAAGAC+CGG | 0.488516 | 7_4:-37487393 | Msa1152220:CDS |
| GTTGAAGATCTTGAAGTAGC+TGG | 0.488757 | 7_4:+37487818 | None:intergenic |
| AGATATGGCAATGAGGCATA+TGG | 0.489004 | 7_4:-37487021 | Msa1152220:intron |
| CTCCCACTAGACCCGCTTCG+AGG | 0.490759 | 7_4:-37487679 | Msa1152220:CDS |
| GATCTTGAACTCGGAACTCC+AGG | 0.491055 | 7_4:+37487350 | None:intergenic |
| GGGCCTCAACACCTACTTCA+AGG | 0.493592 | 7_4:-37487658 | Msa1152220:CDS |
| CTTTGTTCCTTGAGATGAGG+AGG | 0.496371 | 7_4:-37489814 | Msa1152220:CDS |
| TAAGAATTGTTGTTGGCAGA+AGG | 0.499126 | 7_4:+37487101 | None:intergenic |
| GGCATTTGTGAGGGTTCCCA+AGG | 0.499483 | 7_4:+37487449 | None:intergenic |
| CATCAGTAAAATCTAGACCT+TGG | 0.501265 | 7_4:-37487466 | Msa1152220:CDS |
| AAATGTGATGAAATAAATGA+TGG | 0.505033 | 7_4:+37490085 | None:intergenic |
| CGAAAGGACGTGCTTCAGCC+GGG | 0.507353 | 7_4:-37487271 | Msa1152220:intron |
| TTGCTTTGTTCCTTGAGATG+AGG | 0.511091 | 7_4:-37489817 | Msa1152220:CDS |
| GTCTCCGTTTCACTCTTCAA+TGG | 0.512150 | 7_4:+37488323 | None:intergenic |
| TCTATGTACAGTGTGAGATC+AGG | 0.512316 | 7_4:-37486341 | Msa1152220:CDS |
| TGGCATTCAAATGTTTGAAA+CGG | 0.512396 | 7_4:+37490287 | None:intergenic |
| TCCCACTAGACCCGCTTCGA+GGG | 0.513001 | 7_4:-37487678 | Msa1152220:CDS |
| ATGATAAGTCTGATTATGAA+TGG | 0.516982 | 7_4:-37489542 | Msa1152220:intron |
| GTGCTAGATAGAGAAGGTAA+TGG | 0.517431 | 7_4:-37489864 | Msa1152220:exon |
| GGCCCGCGAGGTAGGTGTAG+AGG | 0.519439 | 7_4:+37487748 | None:intergenic |
| GCAGTGCTGCTTGTGGCATG+TGG | 0.519683 | 7_4:+37486278 | None:intergenic |
| TAAGAGAATTTCTTCGTCAA+GGG | 0.521003 | 7_4:-37487849 | Msa1152220:CDS |
| ATACCAAGTAAATGTGCTAA+TGG | 0.525081 | 7_4:-37486076 | Msa1152220:three_prime_UTR |
| CAGGTAGTTCATCTAAGAGC+AGG | 0.527623 | 7_4:-37486322 | Msa1152220:CDS |
| TCAACTGGTAGCTCTGGATT+CGG | 0.527784 | 7_4:-37487068 | Msa1152220:CDS |
| AGTAGAGCTCGTTTCACCGA+TGG | 0.531330 | 7_4:-37487212 | Msa1152220:CDS |
| TCTCTCTCCTCCTCATCTCA+AGG | 0.534681 | 7_4:+37489807 | None:intergenic |
| GAAGGGTCGTTATGCTTTGG+TGG | 0.538364 | 7_4:+37487119 | None:intergenic |
| GTAAGAGAATTTCTTCGTCA+AGG | 0.539407 | 7_4:-37487850 | Msa1152220:CDS |
| AGATGTCTTAGGAGCTGTCA+AGG | 0.549310 | 7_4:+37487631 | None:intergenic |
| AATCATCAGGACTCATATGA+TGG | 0.550432 | 7_4:-37486172 | Msa1152220:three_prime_UTR |
| GCTTGTGGCATGTGGCGAAT+CGG | 0.550591 | 7_4:+37486286 | None:intergenic |
| AAGAATTGTTGTTGGCAGAA+GGG | 0.552747 | 7_4:+37487102 | None:intergenic |
| ACTACATTGCTTCTTGAACC+AGG | 0.554242 | 7_4:+37487923 | None:intergenic |
| CTATTTCTAGTGACTGAAGC+CGG | 0.554548 | 7_4:+37487374 | None:intergenic |
| GATCTTGAAGTAGCTGGAGA+TGG | 0.559705 | 7_4:+37487824 | None:intergenic |
| TCAGTCACTAGAAATAGGCC+TGG | 0.563266 | 7_4:-37487368 | Msa1152220:CDS |
| GGAGCGTCATGAGTAAATCC+AGG | 0.565846 | 7_4:+37487428 | None:intergenic |
| GCTGACGAAGGTCGAGTAGG+AGG | 0.567753 | 7_4:+37487545 | None:intergenic |
| GTTAACGTGGCCCGCGAGGT+AGG | 0.568830 | 7_4:+37487740 | None:intergenic |
| GGTAATGTTGGCCTTCCAGA+TGG | 0.569687 | 7_4:+37487794 | None:intergenic |
| AGGGCTTTCTTCATCACCAT+CGG | 0.572486 | 7_4:+37487196 | None:intergenic |
| AGAGCTAGCAGTGCTGCTTG+TGG | 0.573611 | 7_4:+37486271 | None:intergenic |
| GCTGAAGCACGTCCTTTCGA+AGG | 0.575844 | 7_4:+37487275 | None:intergenic |
| GTGGGAGTTGATGATCTCAC+TGG | 0.580848 | 7_4:+37487695 | None:intergenic |
| GTCTTAGGAGCTGTCAAGGA+AGG | 0.581857 | 7_4:+37487635 | None:intergenic |
| TATGCTAGTGTTGGATAGAG+AGG | 0.583161 | 7_4:+37490143 | None:intergenic |
| AAAGTTCATAAAATGTCTCA+AGG | 0.590036 | 7_4:+37486028 | None:intergenic |
| ATGAAGAACTATGCTAGTGT+TGG | 0.590964 | 7_4:+37490134 | None:intergenic |
| AAGAGAATTTCTTCGTCAAG+GGG | 0.598036 | 7_4:-37487848 | Msa1152220:CDS |
| TTCAAGATCAGCTTCTGTTG+AGG | 0.600510 | 7_4:-37487336 | Msa1152220:CDS |
| GATAATATCCAAATAGAACC+TGG | 0.606440 | 7_4:-37487941 | Msa1152220:CDS |
| GGATAGAGAGGTGAATAACA+AGG | 0.607076 | 7_4:+37490155 | None:intergenic |
| GTCAAGGAAGGCCTTGAAGT+AGG | 0.613064 | 7_4:+37487647 | None:intergenic |
| AGTAAATCCAGGCATTTGTG+AGG | 0.616022 | 7_4:+37487439 | None:intergenic |
| CAGGACTCATATGATGGTCA+AGG | 0.616126 | 7_4:-37486166 | Msa1152220:three_prime_UTR |
| ACACTGTACATAGACGAAGC+TGG | 0.618965 | 7_4:+37486350 | None:intergenic |
| TAGAAGGTGCTAGATAGAGA+AGG | 0.622452 | 7_4:-37489870 | Msa1152220:five_prime_UTR |
| GATGCTGACGAAGGTCGAGT+AGG | 0.625399 | 7_4:+37487542 | None:intergenic |
| GATCTTCAACTCCATCTGGA+AGG | 0.627133 | 7_4:-37487805 | Msa1152220:CDS |
| TTTACTTCTTCAAAACTCTG+AGG | 0.627906 | 7_4:-37489762 | Msa1152220:CDS |
| CAGTCCAACACACCTTCGAA+AGG | 0.628165 | 7_4:-37487287 | Msa1152220:CDS |
| GTAAATCCAGGCATTTGTGA+GGG | 0.628865 | 7_4:+37487440 | None:intergenic |
| GCTGGAATGCTTGTCACGTG+TGG | 0.629743 | 7_4:+37486368 | None:intergenic |
| ACGTCCTTTCGAAGGTGTGT+TGG | 0.630372 | 7_4:+37487283 | None:intergenic |
| GATACTCCAAATGTCCTCGA+TGG | 0.633320 | 7_4:+37487572 | None:intergenic |
| AATGTGATGAAATAAATGAT+GGG | 0.635056 | 7_4:+37490086 | None:intergenic |
| GGCCCTCTACACCTACCTCG+CGG | 0.638423 | 7_4:-37487751 | Msa1152220:CDS |
| AAGAATCCGGTGCAGTCACG+TGG | 0.640150 | 7_4:-37487497 | Msa1152220:intron |
| ACAGAAGCTGATCTTGAACT+CGG | 0.650028 | 7_4:+37487341 | None:intergenic |
| AGGCCTTGAAGTAGGTGTTG+AGG | 0.654755 | 7_4:+37487655 | None:intergenic |
| GGAGTTGATGATCTCACTGG+TGG | 0.658546 | 7_4:+37487698 | None:intergenic |
| AGGTGTTGAGGCCCTCGAAG+CGG | 0.665966 | 7_4:+37487667 | None:intergenic |
| AGTTCCACCAAAGAAGACTG+TGG | 0.671508 | 7_4:-37489589 | Msa1152220:CDS |
| ATGTGATGAAATAAATGATG+GGG | 0.684317 | 7_4:+37490087 | None:intergenic |
| CCGGATTCTTAGCAACAACA+GGG | 0.684742 | 7_4:+37487510 | None:intergenic |
| AGTCTTTAGATATGGCAATG+AGG | 0.692928 | 7_4:-37487028 | Msa1152220:CDS |
| TGATGAATATTGGTTTGACA+AGG | 0.705101 | 7_4:+37490222 | None:intergenic |
| AGAAGTTAACGTGGCCCGCG+AGG | 0.710789 | 7_4:+37487736 | None:intergenic |
| TGACTTCGTAGAAGTTAACG+TGG | 0.714018 | 7_4:+37487727 | None:intergenic |
| GGTAGGTGTAGAGGGCCTCG+AGG | 0.716428 | 7_4:+37487757 | None:intergenic |
| TTCGATCATCAACACCATCG+AGG | 0.723170 | 7_4:-37487586 | Msa1152220:CDS |
| GAAGCGTTCAGGGTAATATG+CGG | 0.727762 | 7_4:-37486391 | Msa1152220:CDS |
| TGAATAACAAGGTAGCTGAG+TGG | 0.742956 | 7_4:+37490166 | None:intergenic |
| CTTCAACAACGAAATCCTCG+AGG | 0.762249 | 7_4:-37487772 | Msa1152220:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTAATATATATTGATC+TGG | - | chr7_4:37487571-37487590 | Msa1152220:CDS | 10.0% |
| !! | GATAAATAATTGATGTTAAA+TGG | - | chr7_4:37487373-37487392 | Msa1152220:CDS | 15.0% |
| !! | AATATTTATGGCATTATATA+TGG | - | chr7_4:37487639-37487658 | Msa1152220:CDS | 15.0% |
| !! | AATTAAGATTCAGTTAATAA+GGG | - | chr7_4:37488128-37488147 | Msa1152220:intron | 15.0% |
| !! | AATGTGATGAAATAAATGAT+GGG | + | chr7_4:37486164-37486183 | None:intergenic | 20.0% |
| !! | AAATGTGATGAAATAAATGA+TGG | + | chr7_4:37486165-37486184 | None:intergenic | 20.0% |
| !! | AAAATTGTGACTTTAGTAAT+TGG | - | chr7_4:37486294-37486313 | Msa1152220:CDS | 20.0% |
| !! | TGTTATAGTTAATGATGTTA+TGG | - | chr7_4:37486570-37486589 | Msa1152220:intron | 20.0% |
| !! | TATAGATCTTGTAAATCAAT+TGG | - | chr7_4:37486768-37486787 | Msa1152220:intron | 20.0% |
| !! | TGAAAACAGAAAATCAAAAT+AGG | + | chr7_4:37486845-37486864 | None:intergenic | 20.0% |
| !! | AAGTGAAAACAAAAGTAAAA+AGG | - | chr7_4:37487041-37487060 | Msa1152220:CDS | 20.0% |
| !! | AGTGAAAACAAAAGTAAAAA+GGG | - | chr7_4:37487042-37487061 | Msa1152220:CDS | 20.0% |
| !! | TTTCTATGTATAATTTGATG+TGG | - | chr7_4:37487113-37487132 | Msa1152220:CDS | 20.0% |
| !!! | TTTTCAGCTATTTCAAATTT+GGG | + | chr7_4:37487262-37487281 | None:intergenic | 20.0% |
| !!! | CAAAGTTGATTATGAATTTA+TGG | - | chr7_4:37487439-37487458 | Msa1152220:CDS | 20.0% |
| !! | AGAAACAAGTTCAATATTTA+TGG | - | chr7_4:37487627-37487646 | Msa1152220:CDS | 20.0% |
| !! | CATTTATGTATTATGCAATT+TGG | + | chr7_4:37487719-37487738 | None:intergenic | 20.0% |
| !! | GAATTAAGATTCAGTTAATA+AGG | - | chr7_4:37488127-37488146 | Msa1152220:intron | 20.0% |
| !! | ATAAAAGAAATGAATGTAGA+AGG | + | chr7_4:37488204-37488223 | None:intergenic | 20.0% |
| !! | TTAACGAGTATAATCTATTT+AGG | - | chr7_4:37489312-37489331 | Msa1152220:intron | 20.0% |
| !! | TAACGAGTATAATCTATTTA+GGG | - | chr7_4:37489313-37489332 | Msa1152220:intron | 20.0% |
| !!! | TTTTTTCATATGCTTAAACT+TGG | - | chr7_4:37489347-37489366 | Msa1152220:intron | 20.0% |
| !!! | AGAAAATGATTTTTAGAAGA+TGG | - | chr7_4:37490046-37490065 | Msa1152220:intron | 20.0% |
| !!! | TTTGCTATTTTATTTGTATG+TGG | - | chr7_4:37490120-37490139 | Msa1152220:five_prime_UTR | 20.0% |
| ! | GAATGATGATTGATGAATAT+TGG | + | chr7_4:37486038-37486057 | None:intergenic | 25.0% |
| !! | GTTTTTGTTCGATAATTTTG+AGG | + | chr7_4:37486060-37486079 | None:intergenic | 25.0% |
| ! | ATGTGATGAAATAAATGATG+GGG | + | chr7_4:37486163-37486182 | None:intergenic | 25.0% |
| !!! | GTTCTTTGTTTTTGCTTAAA+GGG | - | chr7_4:37486316-37486335 | Msa1152220:CDS | 25.0% |
| !!! | TTTGTTTTGTTGATCATAGA+AGG | - | chr7_4:37486361-37486380 | Msa1152220:CDS | 25.0% |
| ! | AAACAAAAAGTTACCTAAGT+TGG | + | chr7_4:37486523-37486542 | None:intergenic | 25.0% |
| !! | AATCATAGAGTTTTCATGAT+TGG | + | chr7_4:37486621-37486640 | None:intergenic | 25.0% |
| ! | AAACTCTATGATTTCAAAGA+TGG | - | chr7_4:37486628-37486647 | Msa1152220:intron | 25.0% |
| ! | ATGATAAGTCTGATTATGAA+TGG | - | chr7_4:37486705-37486724 | Msa1152220:intron | 25.0% |
| !! | CTGATTATGAATGGTAATTT+TGG | - | chr7_4:37486714-37486733 | Msa1152220:intron | 25.0% |
| ! | CAATAAATAGAAGAATGTGT+TGG | + | chr7_4:37486897-37486916 | None:intergenic | 25.0% |
| ! | AAATTTCCACTAAATCATGA+AGG | - | chr7_4:37486928-37486947 | Msa1152220:intron | 25.0% |
| ! | AGAAATTCTTATTGTCTAGT+TGG | - | chr7_4:37487137-37487156 | Msa1152220:CDS | 25.0% |
| !!! | CTTTTCAGCTATTTCAAATT+TGG | + | chr7_4:37487263-37487282 | None:intergenic | 25.0% |
| !!! | GTTTTGATAATGACAATTTG+AGG | - | chr7_4:37487292-37487311 | Msa1152220:CDS | 25.0% |
| !!! | TTGGTTATTTTTAGCATGAA+AGG | + | chr7_4:37487700-37487719 | None:intergenic | 25.0% |
| !! | TTTTCCATAAGAATTGTTGT+TGG | + | chr7_4:37489156-37489175 | None:intergenic | 25.0% |
| ! | TTCAAAGAAGTCTTTAGATA+TGG | - | chr7_4:37489211-37489230 | Msa1152220:intron | 25.0% |
| !!! | AGTTATTTCTATGCTCTATA+TGG | - | chr7_4:37489406-37489425 | Msa1152220:intron | 25.0% |
| ! | TAGTAATTTAGAGAACAAGT+AGG | + | chr7_4:37489462-37489481 | None:intergenic | 25.0% |
| ! | TCTCTAAATTACTAGAATGA+TGG | - | chr7_4:37489468-37489487 | Msa1152220:intron | 25.0% |
| ! | GAGTAAAAGATAGAATAGAA+AGG | - | chr7_4:37489520-37489539 | Msa1152220:intron | 25.0% |
| !!! | GTAACTTGTTTACTATGAAA+AGG | + | chr7_4:37489799-37489818 | None:intergenic | 25.0% |
| ! | AATAACAACTCCATATCTTA+TGG | - | chr7_4:37490011-37490030 | Msa1152220:intron | 25.0% |
| ! | AAGATGGTTTATTAATCATC+AGG | - | chr7_4:37490062-37490081 | Msa1152220:intron | 25.0% |
| ! | AAAGTTCATAAAATGTCTCA+AGG | + | chr7_4:37490222-37490241 | None:intergenic | 25.0% |
| !!! | CATTTTATGAACTTTGTTGT+AGG | - | chr7_4:37490227-37490246 | Msa1152220:five_prime_UTR | 25.0% |
| TGGCATTCAAATGTTTGAAA+CGG | + | chr7_4:37485963-37485982 | None:intergenic | 30.0% | |
| TATGTGAAACTTTGTCTTGT+TGG | + | chr7_4:37485983-37486002 | None:intergenic | 30.0% | |
| !! | TGATGAATATTGGTTTGACA+AGG | + | chr7_4:37486028-37486047 | None:intergenic | 30.0% |
| ATCACATTTCAACTCATTGA+AGG | - | chr7_4:37486176-37486195 | Msa1152220:three_prime_UTR | 30.0% | |
| TGAAGCAAGATTGTTCAAAA+GGG | + | chr7_4:37486235-37486254 | None:intergenic | 30.0% | |
| ATGAAGCAAGATTGTTCAAA+AGG | + | chr7_4:37486236-37486255 | None:intergenic | 30.0% | |
| ! | TTTTGAACAATCTTGCTTCA+TGG | - | chr7_4:37486235-37486254 | Msa1152220:CDS | 30.0% |
| !!! | GGTTCTTTGTTTTTGCTTAA+AGG | - | chr7_4:37486315-37486334 | Msa1152220:CDS | 30.0% |
| !!! | CAGAGTTTTGAAGAAGTAAA+AGG | + | chr7_4:37486485-37486504 | None:intergenic | 30.0% |
| TTTACTTCTTCAAAACTCTG+AGG | - | chr7_4:37486485-37486504 | Msa1152220:intron | 30.0% | |
| TGAAATTTATGGGACCTATA+AGG | - | chr7_4:37486958-37486977 | Msa1152220:intron | 30.0% | |
| ACATACTCTCTAATCCTTAT+AGG | + | chr7_4:37486975-37486994 | None:intergenic | 30.0% | |
| ! | ACATTGTGTTTTCACAAACT+AGG | + | chr7_4:37487004-37487023 | None:intergenic | 30.0% |
| AACGTCATTCAAATTGCAAA+AGG | - | chr7_4:37487184-37487203 | Msa1152220:CDS | 30.0% | |
| GTTTGATTGTTGTATTTGTG+CGG | - | chr7_4:37487235-37487254 | Msa1152220:intron | 30.0% | |
| TAATGAATGAAGACAAGATC+AGG | + | chr7_4:37487348-37487367 | None:intergenic | 30.0% | |
| ! | TTGTCTAAAGTAGGAAAAAG+CGG | + | chr7_4:37487891-37487910 | None:intergenic | 30.0% |
| CTCATATTACATGTCTCTTA+AGG | - | chr7_4:37488008-37488027 | Msa1152220:intron | 30.0% | |
| !!! | AATGTAGAAGGTTTTGAGTA+AGG | + | chr7_4:37488192-37488211 | None:intergenic | 30.0% |
| GATAATATCCAAATAGAACC+TGG | - | chr7_4:37488306-37488325 | Msa1152220:intron | 30.0% | |
| TAAGAGAATTTCTTCGTCAA+GGG | - | chr7_4:37488398-37488417 | Msa1152220:intron | 30.0% | |
| ATCAGTAAAATCTAGACCTT+GGG | - | chr7_4:37488782-37488801 | Msa1152220:intron | 30.0% | |
| AGTGATTTCTTCAAATTTGG+AGG | + | chr7_4:37488843-37488862 | None:intergenic | 30.0% | |
| CTAGCAATACTAAATCTAGA+AGG | - | chr7_4:37488937-37488956 | Msa1152220:intron | 30.0% | |
| ATGATTATTGTGAGTAAACC+CGG | + | chr7_4:37488997-37489016 | None:intergenic | 30.0% | |
| ! | TTTTTGTCCCAATTACAACA+GGG | + | chr7_4:37489073-37489092 | None:intergenic | 30.0% |
| ! | ATTTTTGTCCCAATTACAAC+AGG | + | chr7_4:37489074-37489093 | None:intergenic | 30.0% |
| TGTTGTAATTGGGACAAAAA+TGG | - | chr7_4:37489073-37489092 | Msa1152220:intron | 30.0% | |
| TCTTATGGAAAATCTTCAAC+TGG | - | chr7_4:37489164-37489183 | Msa1152220:intron | 30.0% | |
| TACAAAATCAGTAGTGTTGT+AGG | + | chr7_4:37489285-37489304 | None:intergenic | 30.0% | |
| GTATACTTCCTTGAAGTAAA+AGG | - | chr7_4:37489369-37489388 | Msa1152220:intron | 30.0% | |
| ! | GTTATTTGCCTTTTACTTCA+AGG | + | chr7_4:37489380-37489399 | None:intergenic | 30.0% |
| TATGGTAATAACAGAGGAAA+TGG | - | chr7_4:37489424-37489443 | Msa1152220:intron | 30.0% | |
| AATCTCACTTCCATAAGATA+TGG | + | chr7_4:37490024-37490043 | None:intergenic | 30.0% | |
| !! | GCTATTTTATTTGTATGTGG+TGG | - | chr7_4:37490123-37490142 | Msa1152220:five_prime_UTR | 30.0% |
| ATACCAAGTAAATGTGCTAA+TGG | - | chr7_4:37490171-37490190 | Msa1152220:five_prime_UTR | 30.0% | |
| ! | AAACCATATAAGCTTGTTTG+TGG | - | chr7_4:37490250-37490269 | Msa1152220:five_prime_UTR | 30.0% |
| ATGAAGAACTATGCTAGTGT+TGG | + | chr7_4:37486116-37486135 | None:intergenic | 35.0% | |
| !! | GAACTTGATTTGTCCAACTT+AGG | - | chr7_4:37486507-37486526 | Msa1152220:intron | 35.0% |
| AGGTCCCATAAATTTCATGT+GGG | + | chr7_4:37486955-37486974 | None:intergenic | 35.0% | |
| TAGGTCCCATAAATTTCATG+TGG | + | chr7_4:37486956-37486975 | None:intergenic | 35.0% | |
| AGACAAGATCAGGAACATAA+AGG | + | chr7_4:37487338-37487357 | None:intergenic | 35.0% | |
| ! | GACAAGAGTTTTCTGTTATC+AGG | - | chr7_4:37487844-37487863 | Msa1152220:CDS | 35.0% |
| !! | GCTTTTTCCTACTTTAGACA+AGG | - | chr7_4:37487890-37487909 | Msa1152220:CDS | 35.0% |
| ! | TGTGTTTCCTTGTCTAAAGT+AGG | + | chr7_4:37487900-37487919 | None:intergenic | 35.0% |
| AATGCCATTGAAGAGTGAAA+CGG | - | chr7_4:37487920-37487939 | Msa1152220:CDS | 35.0% | |
| !! | TCCAACTGCTTTAAAGCTAA+GGG | - | chr7_4:37487959-37487978 | Msa1152220:intron | 35.0% |
| AGACATGTAATATGAGACAG+AGG | + | chr7_4:37488004-37488023 | None:intergenic | 35.0% | |
| TCACCTAACTGCTATTGATA+GGG | + | chr7_4:37488109-37488128 | None:intergenic | 35.0% | |
| TTCACCTAACTGCTATTGAT+AGG | + | chr7_4:37488110-37488129 | None:intergenic | 35.0% | |
| GTAAGGTAGAAGAATCAAAG+AGG | + | chr7_4:37488175-37488194 | None:intergenic | 35.0% | |
| ATAAACCTTTCTTGTGTTGC+AGG | - | chr7_4:37488281-37488300 | Msa1152220:intron | 35.0% | |
| TTCTTGAACCAGGTTCTATT+TGG | + | chr7_4:37488317-37488336 | None:intergenic | 35.0% | |
| ! | CATGCATCAATGTCAAGTTT+TGG | - | chr7_4:37488357-37488376 | Msa1152220:CDS | 35.0% |
| !!! | AGTTTTGGTTCTTCCACTAA+TGG | - | chr7_4:37488372-37488391 | Msa1152220:CDS | 35.0% |
| AATTCTCTTACTGCCATTAG+TGG | + | chr7_4:37488388-37488407 | None:intergenic | 35.0% | |
| GTAAGAGAATTTCTTCGTCA+AGG | - | chr7_4:37488397-37488416 | Msa1152220:intron | 35.0% | |
| AAGAGAATTTCTTCGTCAAG+GGG | - | chr7_4:37488399-37488418 | Msa1152220:intron | 35.0% | |
| TTCGTTGTTGAAGGTAATGT+TGG | + | chr7_4:37488468-37488487 | None:intergenic | 35.0% | |
| !! | GGTGTTGATGATCGAATATT+AGG | + | chr7_4:37488657-37488676 | None:intergenic | 35.0% |
| ! | CAAGGTCTAGATTTTACTGA+TGG | + | chr7_4:37488783-37488802 | None:intergenic | 35.0% |
| CATCAGTAAAATCTAGACCT+TGG | - | chr7_4:37488781-37488800 | Msa1152220:intron | 35.0% | |
| GGCAGTGATTTCTTCAAATT+TGG | + | chr7_4:37488846-37488865 | None:intergenic | 35.0% | |
| AAGAAAGCCCTGTTGTAATT+GGG | - | chr7_4:37489063-37489082 | Msa1152220:intron | 35.0% | |
| ! | AAGAATTGTTGTTGGCAGAA+GGG | + | chr7_4:37489148-37489167 | None:intergenic | 35.0% |
| ! | TAAGAATTGTTGTTGGCAGA+AGG | + | chr7_4:37489149-37489168 | None:intergenic | 35.0% |
| TCTGCCAACAACAATTCTTA+TGG | - | chr7_4:37489149-37489168 | Msa1152220:intron | 35.0% | |
| AGTCTTTAGATATGGCAATG+AGG | - | chr7_4:37489219-37489238 | Msa1152220:intron | 35.0% | |
| GCTCTATATGGTAATAACAG+AGG | - | chr7_4:37489418-37489437 | Msa1152220:intron | 35.0% | |
| !! | GTTGATGATTTCTCTTATGC+AGG | - | chr7_4:37489824-37489843 | Msa1152220:CDS | 35.0% |
| TTTCTCTTATGCAGGACATA+AGG | - | chr7_4:37489832-37489851 | Msa1152220:CDS | 35.0% | |
| AATCATCAGGACTCATATGA+TGG | - | chr7_4:37490075-37490094 | Msa1152220:five_prime_UTR | 35.0% | |
| CTACCATTAGCACATTTACT+TGG | + | chr7_4:37490177-37490196 | None:intergenic | 35.0% | |
| GTACCACAAACAAGCTTATA+TGG | + | chr7_4:37490256-37490275 | None:intergenic | 35.0% | |
| TGAATAACAAGGTAGCTGAG+TGG | + | chr7_4:37486084-37486103 | None:intergenic | 40.0% | |
| GGATAGAGAGGTGAATAACA+AGG | + | chr7_4:37486095-37486114 | None:intergenic | 40.0% | |
| ! | TATGCTAGTGTTGGATAGAG+AGG | + | chr7_4:37486107-37486126 | None:intergenic | 40.0% |
| !! | TAGAAGGTGCTAGATAGAGA+AGG | - | chr7_4:37486377-37486396 | Msa1152220:CDS | 40.0% |
| GTGCTAGATAGAGAAGGTAA+TGG | - | chr7_4:37486383-37486402 | Msa1152220:CDS | 40.0% | |
| ! | AGAGAAGGTAATGGTGATGA+AGG | - | chr7_4:37486392-37486411 | Msa1152220:CDS | 40.0% |
| ! | TTGCTTTGTTCCTTGAGATG+AGG | - | chr7_4:37486430-37486449 | Msa1152220:intron | 40.0% |
| TCTTCAACCACAGTCTTCTT+TGG | + | chr7_4:37486668-37486687 | None:intergenic | 40.0% | |
| AAGGCCCCACATGAAATTTA+TGG | - | chr7_4:37486947-37486966 | Msa1152220:intron | 40.0% | |
| AGGCCCCACATGAAATTTAT+GGG | - | chr7_4:37486948-37486967 | Msa1152220:intron | 40.0% | |
| GGTCCCATAAATTTCATGTG+GGG | + | chr7_4:37486954-37486973 | None:intergenic | 40.0% | |
| ! | CCAAAGCTTAAGAGCATGTT+TGG | + | chr7_4:37487083-37487102 | None:intergenic | 40.0% |
| CCAAACATGCTCTTAAGCTT+TGG | - | chr7_4:37487080-37487099 | Msa1152220:CDS | 40.0% | |
| !! | TGCTCTTAAGCTTTGGAATG+TGG | - | chr7_4:37487087-37487106 | Msa1152220:CDS | 40.0% |
| AAGATCAGGAACATAAAGGC+TGG | + | chr7_4:37487334-37487353 | None:intergenic | 40.0% | |
| GATTAAGTGCAAACTTTCCG+CGG | - | chr7_4:37487597-37487616 | Msa1152220:CDS | 40.0% | |
| GAAAACTCTTGTCAGTGTGA+AGG | + | chr7_4:37487837-37487856 | None:intergenic | 40.0% | |
| !! | GTCCAACTGCTTTAAAGCTA+AGG | - | chr7_4:37487958-37487977 | Msa1152220:intron | 40.0% |
| !! | ACCCTTAGCTTTAAAGCAGT+TGG | + | chr7_4:37487963-37487982 | None:intergenic | 40.0% |
| TCTTAAGGTTACACACACAG+AGG | - | chr7_4:37488023-37488042 | Msa1152220:intron | 40.0% | |
| TACCCCTATCAATAGCAGTT+AGG | - | chr7_4:37488103-37488122 | Msa1152220:intron | 40.0% | |
| CACCTAACTGCTATTGATAG+GGG | + | chr7_4:37488108-37488127 | None:intergenic | 40.0% | |
| ATCTACCTGCAACACAAGAA+AGG | + | chr7_4:37488289-37488308 | None:intergenic | 40.0% | |
| ACTACATTGCTTCTTGAACC+AGG | + | chr7_4:37488327-37488346 | None:intergenic | 40.0% | |
| GTTGAAGATCTTGAAGTAGC+TGG | + | chr7_4:37488432-37488451 | None:intergenic | 40.0% | |
| TCAAGATCTTCAACTCCATC+TGG | - | chr7_4:37488438-37488457 | Msa1152220:intron | 40.0% | |
| TGACTTCGTAGAAGTTAACG+TGG | + | chr7_4:37488523-37488542 | None:intergenic | 40.0% | |
| !! | GCTGATCTTTGAGATGTCTT+AGG | + | chr7_4:37488630-37488649 | None:intergenic | 40.0% |
| GTAAATCCAGGCATTTGTGA+GGG | + | chr7_4:37488810-37488829 | None:intergenic | 40.0% | |
| AGTAAATCCAGGCATTTGTG+AGG | + | chr7_4:37488811-37488830 | None:intergenic | 40.0% | |
| !! | CTATTTCTAGTGACTGAAGC+CGG | + | chr7_4:37488876-37488895 | None:intergenic | 40.0% |
| ACAGAAGCTGATCTTGAACT+CGG | + | chr7_4:37488909-37488928 | None:intergenic | 40.0% | |
| TTCAAGATCAGCTTCTGTTG+AGG | - | chr7_4:37488911-37488930 | Msa1152220:intron | 40.0% | |
| GAAGAAAGCCCTGTTGTAAT+TGG | - | chr7_4:37489062-37489081 | Msa1152220:intron | 40.0% | |
| AAATCTTCAACTGGTAGCTC+TGG | - | chr7_4:37489173-37489192 | Msa1152220:intron | 40.0% | |
| AGATATGGCAATGAGGCATA+TGG | - | chr7_4:37489226-37489245 | Msa1152220:intron | 40.0% | |
| TTAGAGAACAAGTAGGAGCA+TGG | + | chr7_4:37489455-37489474 | None:intergenic | 40.0% | |
| TCTATGTACAGTGTGAGATC+AGG | - | chr7_4:37489906-37489925 | Msa1152220:intron | 40.0% | |
| GGCACAAATAGCACAGATAT+TGG | - | chr7_4:37490144-37490163 | Msa1152220:five_prime_UTR | 40.0% | |
| CTTTGTTCCTTGAGATGAGG+AGG | - | chr7_4:37486433-37486452 | Msa1152220:intron | 45.0% | |
| AGTTCCACCAAAGAAGACTG+TGG | - | chr7_4:37486658-37486677 | Msa1152220:intron | 45.0% | |
| TCAACCACAGTCTTCTTTGG+TGG | + | chr7_4:37486665-37486684 | None:intergenic | 45.0% | |
| AGGAACATAAAGGCTGGATG+TGG | + | chr7_4:37487328-37487347 | None:intergenic | 45.0% | |
| !! | ACTTGTTTCTGATTCCTCCG+CGG | + | chr7_4:37487617-37487636 | None:intergenic | 45.0% |
| GTAGGAAAAAGCGGTGTATC+AGG | + | chr7_4:37487882-37487901 | None:intergenic | 45.0% | |
| GTCTCCGTTTCACTCTTCAA+TGG | + | chr7_4:37487927-37487946 | None:intergenic | 45.0% | |
| GATCTTGAAGTAGCTGGAGA+TGG | + | chr7_4:37488426-37488445 | None:intergenic | 45.0% | |
| GATCTTCAACTCCATCTGGA+AGG | - | chr7_4:37488442-37488461 | Msa1152220:intron | 45.0% | |
| CTCGAGGATTTCGTTGTTGA+AGG | + | chr7_4:37488477-37488496 | None:intergenic | 45.0% | |
| CTTCAACAACGAAATCCTCG+AGG | - | chr7_4:37488475-37488494 | Msa1152220:intron | 45.0% | |
| AGATGTCTTAGGAGCTGTCA+AGG | + | chr7_4:37488619-37488638 | None:intergenic | 45.0% | |
| TTCGATCATCAACACCATCG+AGG | - | chr7_4:37488661-37488680 | Msa1152220:intron | 45.0% | |
| TCAACACCATCGAGGACATT+TGG | - | chr7_4:37488669-37488688 | Msa1152220:intron | 45.0% | |
| GATACTCCAAATGTCCTCGA+TGG | + | chr7_4:37488678-37488697 | None:intergenic | 45.0% | |
| CCGGATTCTTAGCAACAACA+GGG | + | chr7_4:37488740-37488759 | None:intergenic | 45.0% | |
| CCCTGTTGTTGCTAAGAATC+CGG | - | chr7_4:37488737-37488756 | Msa1152220:intron | 45.0% | |
| ACCGGATTCTTAGCAACAAC+AGG | + | chr7_4:37488741-37488760 | None:intergenic | 45.0% | |
| GAAATCACTGCCAGAAAGAC+CGG | - | chr7_4:37488854-37488873 | Msa1152220:intron | 45.0% | |
| CGGCTTCAGTCACTAGAAAT+AGG | - | chr7_4:37488874-37488893 | Msa1152220:intron | 45.0% | |
| TCAGTCACTAGAAATAGGCC+TGG | - | chr7_4:37488879-37488898 | Msa1152220:intron | 45.0% | |
| AGGGCTTTCTTCATCACCAT+CGG | + | chr7_4:37489054-37489073 | None:intergenic | 45.0% | |
| !! | TCAACTGGTAGCTCTGGATT+CGG | - | chr7_4:37489179-37489198 | Msa1152220:intron | 45.0% |
| ! | GAAGCGTTCAGGGTAATATG+CGG | - | chr7_4:37489856-37489875 | Msa1152220:exon | 45.0% |
| ACACTGTACATAGACGAAGC+TGG | + | chr7_4:37489900-37489919 | None:intergenic | 45.0% | |
| CAGGTAGTTCATCTAAGAGC+AGG | - | chr7_4:37489925-37489944 | Msa1152220:intron | 45.0% | |
| CAGGACTCATATGATGGTCA+AGG | - | chr7_4:37490081-37490100 | Msa1152220:five_prime_UTR | 45.0% | |
| !! | ATCAATATATATTAATATTA+AGG | + | chr7_4:37487570-37487589 | None:intergenic | 5.0% |
| TCTCTCTCCTCCTCATCTCA+AGG | + | chr7_4:37486443-37486462 | None:intergenic | 50.0% | |
| GTGGGGCCTTCATGATTTAG+TGG | + | chr7_4:37486937-37486956 | None:intergenic | 50.0% | |
| ! | GGTGCTGAGTGCTTTGTCAA+AGG | - | chr7_4:37487460-37487479 | Msa1152220:CDS | 50.0% |
| TAAGTGCAAACTTTCCGCGG+AGG | - | chr7_4:37487600-37487619 | Msa1152220:CDS | 50.0% | |
| GGAAAAAGCGGTGTATCAGG+TGG | + | chr7_4:37487879-37487898 | None:intergenic | 50.0% | |
| !! | GGTAATGTTGGCCTTCCAGA+TGG | + | chr7_4:37488456-37488475 | None:intergenic | 50.0% |
| !! | GGAGTTGATGATCTCACTGG+TGG | + | chr7_4:37488552-37488571 | None:intergenic | 50.0% |
| !! | GTGGGAGTTGATGATCTCAC+TGG | + | chr7_4:37488555-37488574 | None:intergenic | 50.0% |
| ! | AGGCCTTGAAGTAGGTGTTG+AGG | + | chr7_4:37488595-37488614 | None:intergenic | 50.0% |
| GTCAAGGAAGGCCTTGAAGT+AGG | + | chr7_4:37488603-37488622 | None:intergenic | 50.0% | |
| GTCTTAGGAGCTGTCAAGGA+AGG | + | chr7_4:37488615-37488634 | None:intergenic | 50.0% | |
| ! | CGTGCTTTTGATGCTGACGA+AGG | + | chr7_4:37488717-37488736 | None:intergenic | 50.0% |
| ! | GGAGCGTCATGAGTAAATCC+AGG | + | chr7_4:37488822-37488841 | None:intergenic | 50.0% |
| GATCTTGAACTCGGAACTCC+AGG | + | chr7_4:37488900-37488919 | None:intergenic | 50.0% | |
| CAGTCCAACACACCTTCGAA+AGG | - | chr7_4:37488960-37488979 | Msa1152220:intron | 50.0% | |
| ! | ACGTCCTTTCGAAGGTGTGT+TGG | + | chr7_4:37488967-37488986 | None:intergenic | 50.0% |
| AGTAGAGCTCGTTTCACCGA+TGG | - | chr7_4:37489035-37489054 | Msa1152220:intron | 50.0% | |
| GAAGGGTCGTTATGCTTTGG+TGG | + | chr7_4:37489131-37489150 | None:intergenic | 50.0% | |
| GCAGAAGGGTCGTTATGCTT+TGG | + | chr7_4:37489134-37489153 | None:intergenic | 50.0% | |
| ! | GACATAAGGCGAAGCGTTCA+GGG | - | chr7_4:37489846-37489865 | Msa1152220:CDS | 50.0% |
| GGGCCTCAACACCTACTTCA+AGG | - | chr7_4:37488589-37488608 | Msa1152220:intron | 55.0% | |
| GATGCTGACGAAGGTCGAGT+AGG | + | chr7_4:37488708-37488727 | None:intergenic | 55.0% | |
| AAGAATCCGGTGCAGTCACG+TGG | - | chr7_4:37488750-37488769 | Msa1152220:intron | 55.0% | |
| GGCATTTGTGAGGGTTCCCA+AGG | + | chr7_4:37488801-37488820 | None:intergenic | 55.0% | |
| TGGGAACCCTCACAAATGCC+TGG | - | chr7_4:37488801-37488820 | Msa1152220:intron | 55.0% | |
| GTGACTGAAGCCGGTCTTTC+TGG | + | chr7_4:37488867-37488886 | None:intergenic | 55.0% | |
| GCTGAAGCACGTCCTTTCGA+AGG | + | chr7_4:37488975-37488994 | None:intergenic | 55.0% | |
| TCGAAAGGACGTGCTTCAGC+CGG | - | chr7_4:37488975-37488994 | Msa1152220:intron | 55.0% | |
| ! | GGACATAAGGCGAAGCGTTC+AGG | - | chr7_4:37489845-37489864 | Msa1152220:CDS | 55.0% |
| GCTGGAATGCTTGTCACGTG+TGG | + | chr7_4:37489882-37489901 | None:intergenic | 55.0% | |
| GCTTGTGGCATGTGGCGAAT+CGG | + | chr7_4:37489964-37489983 | None:intergenic | 55.0% | |
| !! | AGAGCTAGCAGTGCTGCTTG+TGG | + | chr7_4:37489979-37489998 | None:intergenic | 55.0% |
| AGAAGTTAACGTGGCCCGCG+AGG | + | chr7_4:37488514-37488533 | None:intergenic | 60.0% | |
| TCCCACTAGACCCGCTTCGA+GGG | - | chr7_4:37488569-37488588 | Msa1152220:intron | 60.0% | |
| !! | AGGTGTTGAGGCCCTCGAAG+CGG | + | chr7_4:37488583-37488602 | None:intergenic | 60.0% |
| GCTGACGAAGGTCGAGTAGG+AGG | + | chr7_4:37488705-37488724 | None:intergenic | 60.0% | |
| GAGATGCCACGTGACTGCAC+CGG | + | chr7_4:37488759-37488778 | None:intergenic | 60.0% | |
| CGAAAGGACGTGCTTCAGCC+GGG | - | chr7_4:37488976-37488995 | Msa1152220:intron | 60.0% | |
| !! | GCAGTGCTGCTTGTGGCATG+TGG | + | chr7_4:37489972-37489991 | None:intergenic | 60.0% |
| GGTAGGTGTAGAGGGCCTCG+AGG | + | chr7_4:37488493-37488512 | None:intergenic | 65.0% | |
| GGCCCTCTACACCTACCTCG+CGG | - | chr7_4:37488496-37488515 | Msa1152220:intron | 65.0% | |
| GCCCTCTACACCTACCTCGC+GGG | - | chr7_4:37488497-37488516 | Msa1152220:intron | 65.0% | |
| GCCCGCGAGGTAGGTGTAGA+GGG | + | chr7_4:37488501-37488520 | None:intergenic | 65.0% | |
| GTTAACGTGGCCCGCGAGGT+AGG | + | chr7_4:37488510-37488529 | None:intergenic | 65.0% | |
| CTCCCACTAGACCCGCTTCG+AGG | - | chr7_4:37488568-37488587 | Msa1152220:intron | 65.0% | |
| GCCCTCGAAGCGGGTCTAGT+GGG | + | chr7_4:37488573-37488592 | None:intergenic | 65.0% | |
| ! | GGTGTTGAGGCCCTCGAAGC+GGG | + | chr7_4:37488582-37488601 | None:intergenic | 65.0% |
| GGCCCGCGAGGTAGGTGTAG+AGG | + | chr7_4:37488502-37488521 | None:intergenic | 70.0% | |
| GGCCCTCGAAGCGGGTCTAG+TGG | + | chr7_4:37488574-37488593 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 37485928 | 37490341 | 37485928 | ID=Msa1152220;Name=Msa1152220 |
| chr7_4 | mRNA | 37485928 | 37490341 | 37485928 | ID=Msa1152220-mRNA-1;Parent=Msa1152220;Name=Msa1152220-mRNA-1;_AED=0.03;_eAED=0.03;_QI=292|0.57|0.5|1|0.42|0.25|8|280|478 |
| chr7_4 | exon | 37485928 | 37486423 | 37485928 | ID=Msa1152220-mRNA-1:exon:8910;Parent=Msa1152220-mRNA-1 |
| chr7_4 | exon | 37487022 | 37487250 | 37487022 | ID=Msa1152220-mRNA-1:exon:8909;Parent=Msa1152220-mRNA-1 |
| chr7_4 | exon | 37487272 | 37487504 | 37487272 | ID=Msa1152220-mRNA-1:exon:8908;Parent=Msa1152220-mRNA-1 |
| chr7_4 | exon | 37487511 | 37487962 | 37487511 | ID=Msa1152220-mRNA-1:exon:8907;Parent=Msa1152220-mRNA-1 |
| chr7_4 | exon | 37488336 | 37488403 | 37488336 | ID=Msa1152220-mRNA-1:exon:8906;Parent=Msa1152220-mRNA-1 |
| chr7_4 | exon | 37489543 | 37489654 | 37489543 | ID=Msa1152220-mRNA-1:exon:8905;Parent=Msa1152220-mRNA-1 |
| chr7_4 | exon | 37489741 | 37489889 | 37489741 | ID=Msa1152220-mRNA-1:exon:8904;Parent=Msa1152220-mRNA-1 |
| chr7_4 | exon | 37490072 | 37490341 | 37490072 | ID=Msa1152220-mRNA-1:exon:8903;Parent=Msa1152220-mRNA-1 |
| chr7_4 | five_prime_UTR | 37490072 | 37490341 | 37490072 | ID=Msa1152220-mRNA-1:five_prime_utr;Parent=Msa1152220-mRNA-1 |
| chr7_4 | five_prime_UTR | 37489868 | 37489889 | 37489868 | ID=Msa1152220-mRNA-1:five_prime_utr;Parent=Msa1152220-mRNA-1 |
| chr7_4 | CDS | 37489741 | 37489867 | 37489741 | ID=Msa1152220-mRNA-1:cds;Parent=Msa1152220-mRNA-1 |
| chr7_4 | CDS | 37489543 | 37489654 | 37489543 | ID=Msa1152220-mRNA-1:cds;Parent=Msa1152220-mRNA-1 |
| chr7_4 | CDS | 37488336 | 37488403 | 37488336 | ID=Msa1152220-mRNA-1:cds;Parent=Msa1152220-mRNA-1 |
| chr7_4 | CDS | 37487511 | 37487962 | 37487511 | ID=Msa1152220-mRNA-1:cds;Parent=Msa1152220-mRNA-1 |
| chr7_4 | CDS | 37487272 | 37487504 | 37487272 | ID=Msa1152220-mRNA-1:cds;Parent=Msa1152220-mRNA-1 |
| chr7_4 | CDS | 37487022 | 37487250 | 37487022 | ID=Msa1152220-mRNA-1:cds;Parent=Msa1152220-mRNA-1 |
| chr7_4 | CDS | 37486208 | 37486423 | 37486208 | ID=Msa1152220-mRNA-1:cds;Parent=Msa1152220-mRNA-1 |
| chr7_4 | three_prime_UTR | 37485928 | 37486207 | 37485928 | ID=Msa1152220-mRNA-1:three_prime_utr;Parent=Msa1152220-mRNA-1 |
| Gene Sequence |
| Protein sequence |
