Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1111640 | XP_003623631.1 | 97.017 | 637 | 7 | 1 | 1 | 637 | 1 | 625 | 0.0 | 1276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1111640 | sp|P93026|VSR1_ARATH | 69.062 | 640 | 176 | 6 | 3 | 637 | 1 | 623 | 0.0 | 910 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1111640 | G7KY61 | 97.017 | 637 | 7 | 1 | 1 | 637 | 1 | 625 | 0.0 | 1276 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0221540 | Msa1111640 | 0.805647 | 1.206755e-49 | -8.615850e-47 |
| Msa1026480 | Msa1111640 | 0.844523 | 7.174219e-59 | -8.615850e-47 |
| Msa0304680 | Msa1111640 | 0.811996 | 5.294194e-51 | -8.615850e-47 |
| Msa1111640 | Msa1129330 | 0.807914 | 4.004947e-50 | -8.615850e-47 |
| Msa1111640 | Msa1167180 | 0.970929 | 2.272058e-132 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1111640 | MtrunA17_Chr7g0244951 | 97.017 | 637 | 7 | 1 | 1 | 637 | 1 | 625 | 0.0 | 1276 |
| Msa1111640 | MtrunA17_Chr8g0334591 | 75.079 | 634 | 139 | 4 | 8 | 637 | 7 | 625 | 0.0 | 1005 |
| Msa1111640 | MtrunA17_Chr1g0207291 | 64.992 | 617 | 197 | 3 | 21 | 631 | 25 | 628 | 0.0 | 871 |
| Msa1111640 | MtrunA17_Chr5g0393731 | 63.380 | 639 | 212 | 6 | 1 | 635 | 3 | 623 | 0.0 | 859 |
| Msa1111640 | MtrunA17_Chr2g0296671 | 58.917 | 628 | 239 | 5 | 3 | 627 | 1 | 612 | 0.0 | 744 |
| Msa1111640 | MtrunA17_Chr3g0133721 | 59.524 | 42 | 17 | 0 | 22 | 63 | 26 | 67 | 2.61e-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1111640 | AT3G52850.1 | 69.062 | 640 | 176 | 6 | 3 | 637 | 1 | 623 | 0.0 | 910 |
| Msa1111640 | AT2G30290.1 | 66.667 | 621 | 191 | 3 | 7 | 624 | 8 | 615 | 0.0 | 895 |
| Msa1111640 | AT2G30290.2 | 66.667 | 621 | 191 | 3 | 7 | 624 | 8 | 615 | 0.0 | 894 |
| Msa1111640 | AT2G14720.1 | 66.667 | 612 | 186 | 4 | 22 | 629 | 24 | 621 | 0.0 | 880 |
| Msa1111640 | AT2G14720.2 | 66.667 | 612 | 186 | 4 | 22 | 629 | 24 | 621 | 0.0 | 880 |
| Msa1111640 | AT2G14740.2 | 66.074 | 619 | 190 | 4 | 22 | 636 | 24 | 626 | 0.0 | 879 |
| Msa1111640 | AT2G14740.1 | 66.074 | 619 | 190 | 4 | 22 | 636 | 24 | 626 | 0.0 | 879 |
| Msa1111640 | AT1G30900.1 | 56.962 | 632 | 250 | 6 | 7 | 635 | 10 | 622 | 0.0 | 759 |
| Msa1111640 | AT4G20110.1 | 56.704 | 619 | 246 | 6 | 8 | 623 | 12 | 611 | 0.0 | 745 |
| Msa1111640 | AT4G20110.2 | 56.019 | 623 | 247 | 8 | 8 | 623 | 12 | 614 | 0.0 | 730 |
| Msa1111640 | AT2G34940.1 | 54.662 | 622 | 257 | 7 | 8 | 625 | 12 | 612 | 0.0 | 711 |
Find 170 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGATGGTCGTTACCCTTTC+TGG | 0.105774 | 7_3:-57353288 | Msa1111640:CDS |
| CTTCTTCAGTAGTGAGTATT+TGG | 0.126902 | 7_3:-57353323 | Msa1111640:CDS |
| GAATGCGCAATTGGAAATTT+TGG | 0.142356 | 7_3:-57358354 | Msa1111640:CDS |
| GTCCTTTATCACTCCTAATT+TGG | 0.157985 | 7_3:-57352585 | Msa1111640:three_prime_UTR |
| TAACTACCCTTCAACGATTT+TGG | 0.175932 | 7_3:+57358378 | None:intergenic |
| TTTGGGTTGATGAAGGTTTA+AGG | 0.193131 | 7_3:+57358630 | None:intergenic |
| CAATCTTCAATTTCCTCATC+TGG | 0.222809 | 7_3:-57358588 | Msa1111640:five_prime_UTR |
| TTGATGAAGGTTTAAGGTTA+TGG | 0.246803 | 7_3:+57358636 | None:intergenic |
| CACTGAGATACGTGCAATTA+TGG | 0.263270 | 7_3:-57352864 | Msa1111640:CDS |
| GTAATTAATGCAGCTTAGTT+TGG | 0.281048 | 7_3:+57358545 | None:intergenic |
| CCTGAGCAAGATTTCAATAA+AGG | 0.301302 | 7_3:-57356441 | Msa1111640:CDS |
| TGCTGGTTCTTTGTTTCTTT+AGG | 0.301653 | 7_3:-57352709 | Msa1111640:three_prime_UTR |
| TCTTGTTCGGCTTTGAGAAC+AGG | 0.307945 | 7_3:+57356034 | None:intergenic |
| TTTACAACATTCCCTTCTTC+AGG | 0.309345 | 7_3:+57356834 | None:intergenic |
| AACTTAATATTGTTTACAAC+AGG | 0.326723 | 7_3:+57355271 | None:intergenic |
| GCAACTTGAGAAGCCAAATT+AGG | 0.327426 | 7_3:+57352572 | None:intergenic |
| TTATTCTGTGCAGAGATATA+TGG | 0.332728 | 7_3:-57352888 | Msa1111640:intron |
| TGATGAAGGTTTAAGGTTAT+GGG | 0.343895 | 7_3:+57358637 | None:intergenic |
| TGCTCTTATCAGCAAATCCT+TGG | 0.344144 | 7_3:-57356778 | Msa1111640:CDS |
| ATATCATGATGAACTTGATT+AGG | 0.359207 | 7_3:+57352797 | None:intergenic |
| GTAAACAATATTAAGTTTGT+TGG | 0.361870 | 7_3:-57355265 | Msa1111640:CDS |
| TGATGAACTTGATTAGGATT+AGG | 0.367926 | 7_3:+57352803 | None:intergenic |
| CATGGAAACAAACGAGTGTT+TGG | 0.368306 | 7_3:-57355489 | Msa1111640:CDS |
| AGAAGATAAAAGACTGTGTT+GGG | 0.368316 | 7_3:-57356081 | Msa1111640:CDS |
| ACAGGGTTGAGTATGAATTA+TGG | 0.372106 | 7_3:-57356671 | Msa1111640:CDS |
| ACCAACCTGTGCTTCTTGTT+CGG | 0.378475 | 7_3:+57356021 | None:intergenic |
| TTGTTTCTGGAGTGTTGTTT+TGG | 0.382520 | 7_3:-57358441 | Msa1111640:CDS |
| AGAAGAGTGATGCGTGAGAA+AGG | 0.389452 | 7_3:+57358667 | None:intergenic |
| CCTGGAGTTAAGCAAATTGA+TGG | 0.390535 | 7_3:+57355685 | None:intergenic |
| TTGATGGTTCAGTGGTCTCT+TGG | 0.397813 | 7_3:+57355701 | None:intergenic |
| ATTGTTGAATTCGCAGCTTA+AGG | 0.399943 | 7_3:+57354899 | None:intergenic |
| AGCCAAATTAGGAGTGATAA+AGG | 0.408701 | 7_3:+57352583 | None:intergenic |
| GCTCTTATCAGCAAATCCTT+GGG | 0.416358 | 7_3:-57356777 | Msa1111640:CDS |
| CATCCCTTCTGATTCACATT+CGG | 0.419804 | 7_3:+57358288 | None:intergenic |
| GGTAGTTATGAATGCGCAAT+TGG | 0.421331 | 7_3:-57358363 | Msa1111640:CDS |
| CCTTTATTGAAATCTTGCTC+AGG | 0.426180 | 7_3:+57356441 | None:intergenic |
| GCTTCGTTTCATTCCATGCC+TGG | 0.428484 | 7_3:-57358243 | Msa1111640:CDS |
| CTCTTCCACATCCTGATGAC+AGG | 0.430772 | 7_3:-57356689 | Msa1111640:CDS |
| ACAAAGGTGGGAAAATTTCC+AGG | 0.432696 | 7_3:+57358225 | None:intergenic |
| AGCTCAGCTACTTGAGAAGA+AGG | 0.435515 | 7_3:-57356577 | Msa1111640:CDS |
| CTGAGCAAGATTTCAATAAA+GGG | 0.435569 | 7_3:-57356440 | Msa1111640:CDS |
| AAAGGTTGCGAGTGTCCGTC+AGG | 0.439256 | 7_3:-57354696 | Msa1111640:CDS |
| CCAAGCTTGCTTCTTTAAAG+TGG | 0.439377 | 7_3:-57356382 | Msa1111640:CDS |
| GCTTAGTTTGGATGAAGAAA+AGG | 0.441045 | 7_3:+57358557 | None:intergenic |
| TTGAAATCTTGCTCAGGGTC+CGG | 0.441580 | 7_3:+57356447 | None:intergenic |
| AATATTAAGTTTGTTGGCGA+TGG | 0.451246 | 7_3:-57355259 | Msa1111640:CDS |
| TGGTTCACATAAATCTTGAT+TGG | 0.451802 | 7_3:-57356719 | Msa1111640:CDS |
| TCATACTCAACCCTGTCATC+AGG | 0.459677 | 7_3:+57356678 | None:intergenic |
| AATTCAACAATGGAGGTTGT+TGG | 0.462807 | 7_3:-57354887 | Msa1111640:CDS |
| TTAGGATTAGGAACAATAAG+AGG | 0.470855 | 7_3:+57352815 | None:intergenic |
| AGATTGCTACTTCACTTTGA+AGG | 0.470938 | 7_3:-57356937 | Msa1111640:CDS |
| CTTGTTCGGCTTTGAGAACA+GGG | 0.471659 | 7_3:+57356035 | None:intergenic |
| TTAATTTGATTGTCACACTT+TGG | 0.473837 | 7_3:+57356624 | None:intergenic |
| CATCTAATATTACTGCATGC+AGG | 0.475744 | 7_3:-57355436 | Msa1111640:CDS |
| CCACTTTAAAGAAGCAAGCT+TGG | 0.476108 | 7_3:+57356382 | None:intergenic |
| ACCTTTGTTCTTGTTGATCG+TGG | 0.481421 | 7_3:-57358210 | Msa1111640:CDS |
| AAGAAGATAAAAGACTGTGT+TGG | 0.484694 | 7_3:-57356082 | Msa1111640:CDS |
| CACTTCACCAAAATCGTTGA+AGG | 0.489097 | 7_3:-57358385 | Msa1111640:CDS |
| CGAGAAAATGACACGTGTAT+TGG | 0.490067 | 7_3:-57354356 | Msa1111640:intron |
| AAGGCGTGGAATGCACAAAA+TGG | 0.491706 | 7_3:-57356918 | Msa1111640:CDS |
| TTATCCCACACTATATAACT+TGG | 0.492085 | 7_3:-57356542 | Msa1111640:CDS |
| TTTAAAGTGGCGAATGAAAG+TGG | 0.496449 | 7_3:-57356369 | Msa1111640:CDS |
| GATGAAGTTATTAAATCTCT+TGG | 0.496808 | 7_3:-57356261 | Msa1111640:intron |
| ATCAAGAAGGCTCTCTCAGA+TGG | 0.499559 | 7_3:-57356747 | Msa1111640:CDS |
| CTTTATTGAAATCTTGCTCA+GGG | 0.501895 | 7_3:+57356442 | None:intergenic |
| GGCTCTCTCAGATGGGGAGA+TGG | 0.501940 | 7_3:-57356739 | Msa1111640:CDS |
| GTATGTAACCTTCACATGAC+TGG | 0.501976 | 7_3:+57354655 | None:intergenic |
| AATCTTCAATTTCCTCATCT+GGG | 0.502206 | 7_3:-57358587 | Msa1111640:five_prime_UTR |
| TTTGCATTGTGGACACTGGC+AGG | 0.506969 | 7_3:+57354436 | None:intergenic |
| GTGGAAGACCTTGGCAATGG+TGG | 0.506991 | 7_3:-57356350 | Msa1111640:CDS |
| CAATATGGTGGAACATTGGT+TGG | 0.509487 | 7_3:-57358324 | Msa1111640:CDS |
| CCACGGGCGGTACTGTGCTC+CGG | 0.512798 | 7_3:-57356466 | Msa1111640:CDS |
| ATGCAGGATGACTATAGAAA+AGG | 0.516328 | 7_3:-57354714 | Msa1111640:intron |
| GTTCTCAAGGCAATATGTGC+AGG | 0.520823 | 7_3:-57355727 | Msa1111640:CDS |
| AATAAGAGGTTGATTATCCA+AGG | 0.521981 | 7_3:+57352829 | None:intergenic |
| ACGATGGACACTCCTGAAGA+AGG | 0.522488 | 7_3:-57356846 | Msa1111640:CDS |
| CCATCAATTTGCTTAACTCC+AGG | 0.523558 | 7_3:-57355685 | Msa1111640:CDS |
| GCACTATATTCTGTTCAAGC+GGG | 0.527587 | 7_3:-57352551 | None:intergenic |
| GATGAGGAAATTGAAGATTG+AGG | 0.529071 | 7_3:+57358591 | None:intergenic |
| TCAAGAAGGCTCTCTCAGAT+GGG | 0.529602 | 7_3:-57356746 | Msa1111640:CDS |
| TGGAACATTGGTTGGTTCTG+TGG | 0.530084 | 7_3:-57358316 | Msa1111640:CDS |
| GATTTCAATAAAGGGTATGA+TGG | 0.532997 | 7_3:-57356432 | Msa1111640:CDS |
| CATATTGCCTTGAGAACCGC+TGG | 0.534405 | 7_3:+57355733 | None:intergenic |
| TGGAAAACAATGGTGGTTGT+TGG | 0.537222 | 7_3:-57355469 | Msa1111640:CDS |
| AAAATGCATATCCTCCAGAA+AGG | 0.538733 | 7_3:+57353274 | None:intergenic |
| TTTGGAGTTCCTCAATATGG+TGG | 0.541154 | 7_3:-57358336 | Msa1111640:CDS |
| ATCTAATATTACTGCATGCA+GGG | 0.543015 | 7_3:-57355435 | Msa1111640:intron |
| TATGGCTCAATACATGCCCT+TGG | 0.543355 | 7_3:-57352846 | Msa1111640:CDS |
| ACCAATGTTCCACCATATTG+AGG | 0.544006 | 7_3:+57358327 | None:intergenic |
| GCTCAGCTACTTGAGAAGAA+GGG | 0.546709 | 7_3:-57356576 | Msa1111640:CDS |
| GTCAAGACCAGCGGTTCTCA+AGG | 0.547528 | 7_3:-57355740 | Msa1111640:CDS |
| CTGTTGTTTATAACAAGAGT+AGG | 0.551175 | 7_3:+57355865 | None:intergenic |
| AAATGCATATCCTCCAGAAA+GGG | 0.551290 | 7_3:+57353275 | None:intergenic |
| TCCTCAATATGGTGGAACAT+TGG | 0.552144 | 7_3:-57358328 | Msa1111640:CDS |
| TGCATTTGCATTGTGGACAC+TGG | 0.553776 | 7_3:+57354432 | None:intergenic |
| GGTGGGAAAATTTCCAGGCA+TGG | 0.555364 | 7_3:+57358230 | None:intergenic |
| TTGGATGATTATCCTTGTGA+TGG | 0.555886 | 7_3:-57353304 | Msa1111640:CDS |
| CCGTCAGGGTTCAGAGGTGA+CGG | 0.557248 | 7_3:-57354681 | Msa1111640:CDS |
| CAAATAGCAACGACGAATGT+GGG | 0.559355 | 7_3:-57356647 | Msa1111640:CDS |
| TTAAAGCAGAACAAAGATGC+TGG | 0.561915 | 7_3:-57352726 | Msa1111640:three_prime_UTR |
| AGAGTAAAGCCTTCCACCAT+GGG | 0.563287 | 7_3:+57354857 | None:intergenic |
| CGATGGACACTCCTGAAGAA+GGG | 0.566570 | 7_3:-57356845 | Msa1111640:CDS |
| TGCACTATATTCTGTTCAAG+CGG | 0.566801 | 7_3:-57352552 | Msa1111640:three_prime_UTR |
| AAAATACACAGAAGAATGCT+CGG | 0.568793 | 7_3:-57356283 | Msa1111640:CDS |
| GGGGCAACGGATTGAAAAGT+CGG | 0.570730 | 7_3:+57356317 | None:intergenic |
| ACAAATAGCAACGACGAATG+TGG | 0.574329 | 7_3:-57356648 | Msa1111640:CDS |
| CAAAGCCGAACAAGAAGCAC+AGG | 0.576950 | 7_3:-57356026 | Msa1111640:intron |
| CAATACCAAGTTATATAGTG+TGG | 0.577942 | 7_3:+57356537 | None:intergenic |
| TGATGAATGCAAAGAAAAGT+CGG | 0.584040 | 7_3:-57354459 | Msa1111640:CDS |
| GGAAAGCATCCCATGGTGGA+AGG | 0.584360 | 7_3:-57354866 | Msa1111640:CDS |
| CTCTTATCAGCAAATCCTTG+GGG | 0.588160 | 7_3:-57356776 | Msa1111640:CDS |
| TCAACCCTGTCATCAGGATG+TGG | 0.588259 | 7_3:+57356684 | None:intergenic |
| CTCAGCTACTTGAGAAGAAG+GGG | 0.588622 | 7_3:-57356575 | Msa1111640:CDS |
| TGGAAGACCTTGGCAATGGT+GGG | 0.592844 | 7_3:-57356349 | Msa1111640:CDS |
| GCTACTTCACTTTGAAGGCG+TGG | 0.601050 | 7_3:-57356932 | Msa1111640:CDS |
| ACGATCAACAAGAACAAAGG+TGG | 0.601290 | 7_3:+57358212 | None:intergenic |
| TTTGTTCTTGTTGATCGTGG+AGG | 0.604608 | 7_3:-57358207 | Msa1111640:intron |
| CAGAGTAAAGCCTTCCACCA+TGG | 0.607568 | 7_3:+57354856 | None:intergenic |
| AGTCTCAGTGTATAAACCAC+GGG | 0.609852 | 7_3:-57356482 | Msa1111640:CDS |
| AATACCAAGTTATATAGTGT+GGG | 0.612094 | 7_3:+57356538 | None:intergenic |
| CACTATATTCTGTTCAAGCG+GGG | 0.612321 | 7_3:-57352550 | None:intergenic |
| GACGGAGTCCAGTCATGTGA+AGG | 0.612993 | 7_3:-57354663 | Msa1111640:intron |
| ACATAATCCCACCATTGCCA+AGG | 0.613400 | 7_3:+57356342 | None:intergenic |
| TAAGCAAATTGATGGTTCAG+TGG | 0.613644 | 7_3:+57355693 | None:intergenic |
| TATCCGAATGTGAATCAGAA+GGG | 0.614183 | 7_3:-57358291 | Msa1111640:CDS |
| TATGAGTGCAAGTGCAATAG+CGG | 0.618675 | 7_3:-57354392 | Msa1111640:CDS |
| AAGTTAGGAAAATGAAGACC+TGG | 0.619812 | 7_3:+57355667 | None:intergenic |
| GCGTGGAATGCACAAAATGG+TGG | 0.620339 | 7_3:-57356915 | Msa1111640:CDS |
| TCTTCCACATCCTGATGACA+GGG | 0.622361 | 7_3:-57356688 | Msa1111640:CDS |
| TTATCCGAATGTGAATCAGA+AGG | 0.622942 | 7_3:-57358292 | Msa1111640:CDS |
| ATGGTCGTTACCCTTTCTGG+AGG | 0.623695 | 7_3:-57353285 | Msa1111640:CDS |
| ACTTCACCAAAATCGTTGAA+GGG | 0.623707 | 7_3:-57358384 | Msa1111640:CDS |
| TAATTATAGGACACTTTCCG+TGG | 0.627983 | 7_3:-57355310 | Msa1111640:intron |
| GAGTGTCCGTCAGGGTTCAG+AGG | 0.628151 | 7_3:-57354687 | Msa1111640:CDS |
| CGATCAACAAGAACAAAGGT+GGG | 0.630851 | 7_3:+57358213 | None:intergenic |
| GGCATACACATACTCTTCCA+CGG | 0.632278 | 7_3:+57355293 | None:intergenic |
| GATTTGCTGATAAGAGCAGA+AGG | 0.632884 | 7_3:+57356783 | None:intergenic |
| CCGGAGCACAGTACCGCCCG+TGG | 0.634905 | 7_3:+57356466 | None:intergenic |
| ACTTAATATTGTTTACAACA+GGG | 0.639041 | 7_3:+57355272 | None:intergenic |
| AAACAATGGTGGTTGTTGGA+AGG | 0.640261 | 7_3:-57355465 | Msa1111640:CDS |
| CAAGAAGGCTCTCTCAGATG+GGG | 0.641398 | 7_3:-57356745 | Msa1111640:CDS |
| AGGTAAGTTGTCAAGACCAG+CGG | 0.644520 | 7_3:-57355749 | Msa1111640:CDS |
| CTTGCACTCATAACTCCCAA+AGG | 0.645113 | 7_3:+57354403 | None:intergenic |
| CAGATTGGCAAAGAGTCTCG+TGG | 0.647523 | 7_3:-57355904 | Msa1111640:CDS |
| CATAAATCTTGATTGGCGAG+AGG | 0.650628 | 7_3:-57356712 | Msa1111640:CDS |
| GATGGATATACTCTCTGTGA+AGG | 0.650944 | 7_3:-57355241 | Msa1111640:intron |
| AAAGGAAGGTGACCCAGATG+AGG | 0.654053 | 7_3:+57358575 | None:intergenic |
| AGCTGCGAATTCAACAATGG+AGG | 0.654911 | 7_3:-57354894 | Msa1111640:CDS |
| ATAAGAGGTTGATTATCCAA+GGG | 0.659505 | 7_3:+57352830 | None:intergenic |
| TTAAGCTGCGAATTCAACAA+TGG | 0.661033 | 7_3:-57354897 | Msa1111640:CDS |
| AAGGTTGCGAGTGTCCGTCA+GGG | 0.662883 | 7_3:-57354695 | Msa1111640:CDS |
| TCCACGATCAACAAGAACAA+AGG | 0.664109 | 7_3:+57358209 | None:intergenic |
| CGAATGAAAGTGGAAGACCT+TGG | 0.664715 | 7_3:-57356359 | Msa1111640:CDS |
| GAAGATAAAAGACTGTGTTG+GGG | 0.665853 | 7_3:-57356080 | Msa1111640:CDS |
| CCGTCACCTCTGAACCCTGA+CGG | 0.665940 | 7_3:+57354681 | None:intergenic |
| TGTAAATCTCAACAATGTGG+TGG | 0.667968 | 7_3:-57352675 | Msa1111640:three_prime_UTR |
| AAGTCTCAGTGTATAAACCA+CGG | 0.670031 | 7_3:-57356483 | Msa1111640:CDS |
| AGTTTGGATGAAGAAAAGGA+AGG | 0.670958 | 7_3:+57358561 | None:intergenic |
| ACATTGTTGAGATTTACAAG+AGG | 0.673620 | 7_3:+57352680 | None:intergenic |
| AAAGGGTAACGACCATCACA+AGG | 0.679891 | 7_3:+57353292 | None:intergenic |
| AACGAGTGTTTGGAAAACAA+TGG | 0.681450 | 7_3:-57355479 | Msa1111640:CDS |
| TCTTATCAGCAAATCCTTGG+GGG | 0.682194 | 7_3:-57356775 | Msa1111640:CDS |
| CTCAGTGTATAAACCACGGG+CGG | 0.687022 | 7_3:-57356479 | Msa1111640:CDS |
| AGAAGAAAGACTAATCACGA+TGG | 0.689699 | 7_3:-57356862 | Msa1111640:CDS |
| TCTTGTAAATCTCAACAATG+TGG | 0.690711 | 7_3:-57352678 | Msa1111640:three_prime_UTR |
| GGTTGTTGGAAAGCATCCCA+TGG | 0.695045 | 7_3:-57354873 | Msa1111640:CDS |
| GAGTGTTTGGAAAACAATGG+TGG | 0.707960 | 7_3:-57355476 | Msa1111640:CDS |
| TGTTGGAAAGCATCCCATGG+TGG | 0.716154 | 7_3:-57354870 | Msa1111640:CDS |
| AAAGTGGAAGACCTTGGCAA+TGG | 0.716769 | 7_3:-57356353 | Msa1111640:CDS |
| ATAAACAACAGACAGTACAG+AGG | 0.753536 | 7_3:-57355853 | Msa1111640:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGAAATTCAATAAATAA+GGG | - | chr7_3:57353460-57353479 | Msa1111640:intron | 10.0% |
| !! | TTTAAGTGAAATTTATTAAT+TGG | - | chr7_3:57354121-57354140 | Msa1111640:intron | 10.0% |
| !! | TTAAGTGAAATTTATTAATT+GGG | - | chr7_3:57354122-57354141 | Msa1111640:intron | 10.0% |
| !!! | CTATTTTTATTTTTTTAGTA+TGG | + | chr7_3:57354194-57354213 | None:intergenic | 10.0% |
| !!! | CACTAATTTTTTTTTTTTTT+TGG | + | chr7_3:57356152-57356171 | None:intergenic | 10.0% |
| !! | CATATGAAATTCAATAAATA+AGG | - | chr7_3:57353459-57353478 | Msa1111640:intron | 15.0% |
| !! | AATTCAATACAACTAAATAA+CGG | + | chr7_3:57355496-57355515 | None:intergenic | 15.0% |
| !!! | AAATTTGAAATCAAAAAGTT+AGG | + | chr7_3:57355643-57355662 | None:intergenic | 15.0% |
| !!! | AACTTTTTGATTTCAAATTT+TGG | - | chr7_3:57355643-57355662 | Msa1111640:intron | 15.0% |
| !!! | ATGTGTTTTTTCTTAATTAT+AGG | - | chr7_3:57355969-57355988 | Msa1111640:intron | 15.0% |
| !! | TAAAAATATAGAATCTAGAA+TGG | + | chr7_3:57356116-57356135 | None:intergenic | 15.0% |
| !! | AAAAATTGATAGATCTAAAA+AGG | - | chr7_3:57357072-57357091 | Msa1111640:intron | 15.0% |
| !!! | TAGTCTTTTTTCAAATTTAT+TGG | - | chr7_3:57357163-57357182 | Msa1111640:intron | 15.0% |
| !!! | ATTAATTGTGTTGATTACAA+TGG | - | chr7_3:57353424-57353443 | Msa1111640:intron | 20.0% |
| !!! | AATAAATAAGGGTATAATAG+TGG | - | chr7_3:57353471-57353490 | Msa1111640:intron | 20.0% |
| !!! | TAGAATTGCTTTATTTTCTT+TGG | - | chr7_3:57353824-57353843 | Msa1111640:intron | 20.0% |
| !! | TATATAGTGACATTGAAAAT+TGG | - | chr7_3:57353854-57353873 | Msa1111640:intron | 20.0% |
| !! | ATATAGTGACATTGAAAATT+GGG | - | chr7_3:57353855-57353874 | Msa1111640:intron | 20.0% |
| !!! | TAATCAGTTTCAATTTTCTT+TGG | - | chr7_3:57354097-57354116 | Msa1111640:intron | 20.0% |
| !!! | AATCAGTTTCAATTTTCTTT+GGG | - | chr7_3:57354098-57354117 | Msa1111640:intron | 20.0% |
| !! | TGAAATTTATTAATTGGGTA+TGG | - | chr7_3:57354127-57354146 | Msa1111640:intron | 20.0% |
| !!! | AAAAATAGAAACATGTTTTC+TGG | - | chr7_3:57354206-57354225 | Msa1111640:intron | 20.0% |
| !!! | AATTTTGTTAAGAGCTTTAA+AGG | - | chr7_3:57354689-57354708 | Msa1111640:CDS | 20.0% |
| !! | CTGCTTAATAAAAATTCTTT+AGG | + | chr7_3:57354782-57354801 | None:intergenic | 20.0% |
| !! | TGAACATCATAGAAAATAAA+AGG | + | chr7_3:57355094-57355113 | None:intergenic | 20.0% |
| !! | ACATGATTAAATATCAATGA+AGG | + | chr7_3:57355746-57355765 | None:intergenic | 20.0% |
| !! | ACTTAATATTGTTTACAACA+GGG | + | chr7_3:57356023-57356042 | None:intergenic | 20.0% |
| !! | AACTTAATATTGTTTACAAC+AGG | + | chr7_3:57356024-57356043 | None:intergenic | 20.0% |
| !! | GTAAACAATATTAAGTTTGT+TGG | - | chr7_3:57356027-57356046 | Msa1111640:CDS | 20.0% |
| !!! | TTTTTTTTTTTTGGTGCAAA+TGG | + | chr7_3:57356143-57356162 | None:intergenic | 20.0% |
| !!! | ATTTTTAGATAACACATAAC+CGG | + | chr7_3:57357058-57357077 | None:intergenic | 20.0% |
| !!! | TATATTGATTAGCCAAATAA+TGG | - | chr7_3:57357213-57357232 | Msa1111640:intron | 20.0% |
| !!! | GATATTATTACATGTTTTGT+AGG | + | chr7_3:57357310-57357329 | None:intergenic | 20.0% |
| !!! | TATTCAAATTTTCACTCATT+TGG | - | chr7_3:57357921-57357940 | Msa1111640:intron | 20.0% |
| !! | ATTTGGTATATTATAAATGC+AGG | - | chr7_3:57357938-57357957 | Msa1111640:intron | 20.0% |
| !!! | AAGAATAGTTGAGAATATTT+TGG | - | chr7_3:57358131-57358150 | Msa1111640:intron | 20.0% |
| !!! | TTAAGAACTCTGTTTTATAT+GGG | - | chr7_3:57358253-57358272 | Msa1111640:CDS | 20.0% |
| !! | AAAAAATCAGAAGGAAAATA+AGG | + | chr7_3:57358652-57358671 | None:intergenic | 20.0% |
| !!! | AAAAAGCATCGAAATCTTAA+AGG | + | chr7_3:57352605-57352624 | None:intergenic | 25.0% |
| !! | GCTAAAAATAGAAGCTTTTT+GGG | + | chr7_3:57352682-57352701 | None:intergenic | 25.0% |
| ! | CATAATGAGATTTAATGTAC+AGG | + | chr7_3:57353324-57353343 | None:intergenic | 25.0% |
| ! | ATGTATTCAAAATAAGTGTC+GGG | + | chr7_3:57353665-57353684 | None:intergenic | 25.0% |
| ! | CATGTATTCAAAATAAGTGT+CGG | + | chr7_3:57353666-57353685 | None:intergenic | 25.0% |
| !! | ATTAAGTTCCTTGCTATATT+TGG | - | chr7_3:57353763-57353782 | Msa1111640:intron | 25.0% |
| ! | TGTGGTATATTGAATATGTT+AGG | - | chr7_3:57353790-57353809 | Msa1111640:intron | 25.0% |
| ! | ATATTGAATATGTTAGGCAT+TGG | - | chr7_3:57353796-57353815 | Msa1111640:intron | 25.0% |
| !!! | TAATTTTCGAGTATTCTAGT+AGG | - | chr7_3:57353915-57353934 | Msa1111640:intron | 25.0% |
| ! | ATTTATTAATTGGGTATGGA+TGG | - | chr7_3:57354131-57354150 | Msa1111640:intron | 25.0% |
| !!! | AATTTATTCCCTGTTGATTT+TGG | - | chr7_3:57354331-57354350 | Msa1111640:intron | 25.0% |
| !! | TTAATTTGATTGTCACACTT+TGG | + | chr7_3:57354671-57354690 | None:intergenic | 25.0% |
| ! | AATACCAAGTTATATAGTGT+GGG | + | chr7_3:57354757-57354776 | None:intergenic | 25.0% |
| !!! | TGTATTTTTTCTCTTTCATG+GGG | + | chr7_3:57354997-57355016 | None:intergenic | 25.0% |
| !!! | GTGTATTTTTTCTCTTTCAT+GGG | + | chr7_3:57354998-57355017 | None:intergenic | 25.0% |
| !!! | TGTGTATTTTTTCTCTTTCA+TGG | + | chr7_3:57354999-57355018 | None:intergenic | 25.0% |
| ! | GATGAAGTTATTAAATCTCT+TGG | - | chr7_3:57355031-57355050 | Msa1111640:intron | 25.0% |
| ! | AAGTTATTAAATCTCTTGGT+AGG | - | chr7_3:57355035-57355054 | Msa1111640:intron | 25.0% |
| ! | CTATGATGTTCATAGAAAAA+TGG | - | chr7_3:57355102-57355121 | Msa1111640:intron | 25.0% |
| !! | TGAAAACTGTATTACACTTT+TGG | - | chr7_3:57355923-57355942 | Msa1111640:intron | 25.0% |
| ! | CACTTTATCTGAATTCAAAA+TGG | + | chr7_3:57356084-57356103 | None:intergenic | 25.0% |
| ! | AGTGCAAACAGAAAATATAT+AGG | - | chr7_3:57356168-57356187 | Msa1111640:intron | 25.0% |
| ! | ACAAGGATAAGAAAGTAATA+AGG | + | chr7_3:57356295-57356314 | None:intergenic | 25.0% |
| !!! | TGTTTTTTAATTCACAATGC+AGG | - | chr7_3:57356562-57356581 | Msa1111640:CDS | 25.0% |
| ! | CTATAAAAACAGCCAAAAAT+GGG | + | chr7_3:57356666-57356685 | None:intergenic | 25.0% |
| ! | TCTATAAAAACAGCCAAAAA+TGG | + | chr7_3:57356667-57356686 | None:intergenic | 25.0% |
| ! | GAAAAAAGACTAATCCAAAT+TGG | + | chr7_3:57357155-57357174 | None:intergenic | 25.0% |
| !!! | TAGTGTTTTAAAAACCAGAA+TGG | + | chr7_3:57357484-57357503 | None:intergenic | 25.0% |
| ! | TACTCTAGATATTTCCATAA+TGG | + | chr7_3:57357671-57357690 | None:intergenic | 25.0% |
| !! | TATTTTTCATTCCAAACTCT+AGG | - | chr7_3:57357689-57357708 | Msa1111640:intron | 25.0% |
| ! | AGTTCTTAAGTTTAAACCTT+GGG | + | chr7_3:57358242-57358261 | None:intergenic | 25.0% |
| !! | CTTAAGAACTCTGTTTTATA+TGG | - | chr7_3:57358252-57358271 | Msa1111640:CDS | 25.0% |
| ! | ATAAACAAACAATTTCAGGA+GGG | + | chr7_3:57358388-57358407 | None:intergenic | 25.0% |
| ! | AATAAACAAACAATTTCAGG+AGG | + | chr7_3:57358389-57358408 | None:intergenic | 25.0% |
| ! | CAGAATAAACAAACAATTTC+AGG | + | chr7_3:57358392-57358411 | None:intergenic | 25.0% |
| ! | ATATCATGATGAACTTGATT+AGG | + | chr7_3:57358498-57358517 | None:intergenic | 25.0% |
| ! | TGATGAAGGTTTAAGGTTAT+GGG | + | chr7_3:57352658-57352677 | None:intergenic | 30.0% |
| ! | TTGATGAAGGTTTAAGGTTA+TGG | + | chr7_3:57352659-57352678 | None:intergenic | 30.0% |
| ! | GGCTAAAAATAGAAGCTTTT+TGG | + | chr7_3:57352683-57352702 | None:intergenic | 30.0% |
| AATCTTCAATTTCCTCATCT+GGG | - | chr7_3:57352705-57352724 | Msa1111640:three_prime_UTR | 30.0% | |
| GTAATTAATGCAGCTTAGTT+TGG | + | chr7_3:57352750-57352769 | None:intergenic | 30.0% | |
| !!! | TCTTTTGTTGTTGTGTGTTT+TGG | - | chr7_3:57352826-57352845 | Msa1111640:CDS | 30.0% |
| !!! | AATTTTGGAGTTCCTCAATA+TGG | - | chr7_3:57352953-57352972 | Msa1111640:intron | 30.0% |
| TAAAACTCTTAGTGCATGTT+TGG | - | chr7_3:57353128-57353147 | Msa1111640:intron | 30.0% | |
| ! | GTTTGGATTTAGTGCATTTT+AGG | - | chr7_3:57353145-57353164 | Msa1111640:intron | 30.0% |
| CAAATTGAGATTACAGAATC+AGG | + | chr7_3:57353191-57353210 | None:intergenic | 30.0% | |
| ! | TTTTGCTAAAGTGAAACTCA+CGG | + | chr7_3:57353274-57353293 | None:intergenic | 30.0% |
| AAACGACTAATATTGTGAGA+CGG | + | chr7_3:57353375-57353394 | None:intergenic | 30.0% | |
| CTCACAATATTAGTCGTTTA+AGG | - | chr7_3:57353376-57353395 | Msa1111640:intron | 30.0% | |
| AAGTGACAATTATTGTGAGA+CGG | - | chr7_3:57353562-57353581 | Msa1111640:intron | 30.0% | |
| ! | GAATACATGTGAGATTTTTG+AGG | - | chr7_3:57353677-57353696 | Msa1111640:intron | 30.0% |
| !!! | TTGTTTTTACTTGCATGACA+TGG | - | chr7_3:57353700-57353719 | Msa1111640:intron | 30.0% |
| TTGCATGACATGGAATTTAT+AGG | - | chr7_3:57353710-57353729 | Msa1111640:intron | 30.0% | |
| TGACATGGAATTTATAGGAA+AGG | - | chr7_3:57353715-57353734 | Msa1111640:intron | 30.0% | |
| TAGCAAGGAACTTAATATAG+TGG | + | chr7_3:57353759-57353778 | None:intergenic | 30.0% | |
| ! | AAACATATGTGACATCGTTT+TGG | + | chr7_3:57353946-57353965 | None:intergenic | 30.0% |
| AAAACGATGTCACATATGTT+TGG | - | chr7_3:57353945-57353964 | Msa1111640:intron | 30.0% | |
| ! | TTTTGGCAAAAGCTATACTT+TGG | + | chr7_3:57354023-57354042 | None:intergenic | 30.0% |
| TACTTATGATATCGACGAAT+AGG | - | chr7_3:57354267-57354286 | Msa1111640:intron | 30.0% | |
| TGGTTCACATAAATCTTGAT+TGG | - | chr7_3:57354573-57354592 | Msa1111640:intron | 30.0% | |
| TTATCCCACACTATATAACT+TGG | - | chr7_3:57354750-57354769 | Msa1111640:intron | 30.0% | |
| CAATACCAAGTTATATAGTG+TGG | + | chr7_3:57354758-57354777 | None:intergenic | 30.0% | |
| CTTTATTGAAATCTTGCTCA+GGG | + | chr7_3:57354853-57354872 | None:intergenic | 30.0% | |
| CTGAGCAAGATTTCAATAAA+GGG | - | chr7_3:57354852-57354871 | Msa1111640:CDS | 30.0% | |
| ! | GATTTCAATAAAGGGTATGA+TGG | - | chr7_3:57354860-57354879 | Msa1111640:CDS | 30.0% |
| AAAATACACAGAAGAATGCT+CGG | - | chr7_3:57355009-57355028 | Msa1111640:intron | 30.0% | |
| AAGGCAAGTTAATTAAGTAG+AGG | + | chr7_3:57355075-57355094 | None:intergenic | 30.0% | |
| AAAGTAAATGACACAGAAGA+GGG | + | chr7_3:57355175-57355194 | None:intergenic | 30.0% | |
| AAGAAGATAAAAGACTGTGT+TGG | - | chr7_3:57355210-57355229 | Msa1111640:intron | 30.0% | |
| AGAAGATAAAAGACTGTGTT+GGG | - | chr7_3:57355211-57355230 | Msa1111640:intron | 30.0% | |
| ACAATCATGAAACAACAGAA+TGG | + | chr7_3:57355345-57355364 | None:intergenic | 30.0% | |
| ! | TTCCAACTTTGATTTCAGAT+TGG | - | chr7_3:57355373-57355392 | Msa1111640:intron | 30.0% |
| ! | CTGTTGTTTATAACAAGAGT+AGG | + | chr7_3:57355430-57355449 | None:intergenic | 30.0% |
| AAAAAGAAGGGGAAAGAAAA+AGG | + | chr7_3:57355704-57355723 | None:intergenic | 30.0% | |
| !!! | GTTGGTTTTCTAAAAAGAAG+GGG | + | chr7_3:57355715-57355734 | None:intergenic | 30.0% |
| !!! | GGTTGGTTTTCTAAAAAGAA+GGG | + | chr7_3:57355716-57355735 | None:intergenic | 30.0% |
| !!! | AGGTTGGTTTTCTAAAAAGA+AGG | + | chr7_3:57355717-57355736 | None:intergenic | 30.0% |
| !! | CTGATTTTTATTTGCAGACA+TGG | - | chr7_3:57355785-57355804 | Msa1111640:intron | 30.0% |
| ATCTAATATTACTGCATGCA+GGG | - | chr7_3:57355857-57355876 | Msa1111640:CDS | 30.0% | |
| !! | AATATTAAGTTTGTTGGCGA+TGG | - | chr7_3:57356033-57356052 | Msa1111640:CDS | 30.0% |
| ! | ATAGAATCTAGAATGGAGAA+CGG | + | chr7_3:57356109-57356128 | None:intergenic | 30.0% |
| ! | AGCTTTTCAACTACCAAAAT+CGG | - | chr7_3:57356207-57356226 | Msa1111640:intron | 30.0% |
| AGAATGAGAGAAATCAAAAG+TGG | + | chr7_3:57356271-57356290 | None:intergenic | 30.0% | |
| TTGAATTTCTTAACAGCTTC+AGG | - | chr7_3:57356368-57356387 | Msa1111640:CDS | 30.0% | |
| !! | ACATTATTTCTGTTACTGAG+TGG | - | chr7_3:57356493-57356512 | Msa1111640:CDS | 30.0% |
| TGATGAATGCAAAGAAAAGT+CGG | - | chr7_3:57356833-57356852 | Msa1111640:CDS | 30.0% | |
| !! | GTATTTTTGCATTTGCATTG+TGG | + | chr7_3:57356870-57356889 | None:intergenic | 30.0% |
| TGCAAATGCAAAAATACCTT+TGG | - | chr7_3:57356873-57356892 | Msa1111640:CDS | 30.0% | |
| GCAAATGCAAAAATACCTTT+GGG | - | chr7_3:57356874-57356893 | Msa1111640:CDS | 30.0% | |
| GAATATTTGCAACTTGTCAT+TGG | + | chr7_3:57357240-57357259 | None:intergenic | 30.0% | |
| GATACTAATTCATGGTTCAA+TGG | + | chr7_3:57357445-57357464 | None:intergenic | 30.0% | |
| TTAAAAACCAGAATGGTCAT+TGG | + | chr7_3:57357477-57357496 | None:intergenic | 30.0% | |
| AAGAAAATAGACCTAGAGTT+TGG | + | chr7_3:57357703-57357722 | None:intergenic | 30.0% | |
| TATCTGTGTACAATCTCTTA+AGG | - | chr7_3:57357773-57357792 | Msa1111640:intron | 30.0% | |
| ! | ATTTTACAAGTACAGAATCC+AGG | - | chr7_3:57358036-57358055 | Msa1111640:intron | 30.0% |
| GAGTTCTTAAGTTTAAACCT+TGG | + | chr7_3:57358243-57358262 | None:intergenic | 30.0% | |
| TTATTCTGTGCAGAGATATA+TGG | - | chr7_3:57358404-57358423 | Msa1111640:CDS | 30.0% | |
| ! | ATAAGAGGTTGATTATCCAA+GGG | + | chr7_3:57358465-57358484 | None:intergenic | 30.0% |
| ! | AATAAGAGGTTGATTATCCA+AGG | + | chr7_3:57358466-57358485 | None:intergenic | 30.0% |
| TTAGGATTAGGAACAATAAG+AGG | + | chr7_3:57358480-57358499 | None:intergenic | 30.0% | |
| TGATGAACTTGATTAGGATT+AGG | + | chr7_3:57358492-57358511 | None:intergenic | 30.0% | |
| !! | GTCTTGTTAATCTTTTTCTG+AGG | - | chr7_3:57358525-57358544 | Msa1111640:five_prime_UTR | 30.0% |
| ACATTGTTGAGATTTACAAG+AGG | + | chr7_3:57358615-57358634 | None:intergenic | 30.0% | |
| TCTTGTAAATCTCAACAATG+TGG | - | chr7_3:57358614-57358633 | Msa1111640:five_prime_UTR | 30.0% | |
| ACGTCAAAGAAAAAATCAGA+AGG | + | chr7_3:57358661-57358680 | None:intergenic | 30.0% | |
| !! | TTTGGGTTGATGAAGGTTTA+AGG | + | chr7_3:57352665-57352684 | None:intergenic | 35.0% |
| GATGAGGAAATTGAAGATTG+AGG | + | chr7_3:57352704-57352723 | None:intergenic | 35.0% | |
| CAATCTTCAATTTCCTCATC+TGG | - | chr7_3:57352704-57352723 | Msa1111640:three_prime_UTR | 35.0% | |
| AGTTTGGATGAAGAAAAGGA+AGG | + | chr7_3:57352734-57352753 | None:intergenic | 35.0% | |
| ! | GCTTAGTTTGGATGAAGAAA+AGG | + | chr7_3:57352738-57352757 | None:intergenic | 35.0% |
| !!! | GTGTGTTTTGGTTTTGTTTC+TGG | - | chr7_3:57352838-57352857 | Msa1111640:CDS | 35.0% |
| !!! | TTGTTTCTGGAGTGTTGTTT+TGG | - | chr7_3:57352851-57352870 | Msa1111640:CDS | 35.0% |
| !!! | GTGTTGTTTTGGTAGGTTTT+TGG | - | chr7_3:57352862-57352881 | Msa1111640:CDS | 35.0% |
| !!! | TTGTTTTGGTAGGTTTTTGG+TGG | - | chr7_3:57352865-57352884 | Msa1111640:CDS | 35.0% |
| ACTTCACCAAAATCGTTGAA+GGG | - | chr7_3:57352908-57352927 | Msa1111640:intron | 35.0% | |
| ! | TAACTACCCTTCAACGATTT+TGG | + | chr7_3:57352917-57352936 | None:intergenic | 35.0% |
| ! | GAATGCGCAATTGGAAATTT+TGG | - | chr7_3:57352938-57352957 | Msa1111640:intron | 35.0% |
| TTATCCGAATGTGAATCAGA+AGG | - | chr7_3:57353000-57353019 | Msa1111640:intron | 35.0% | |
| TATCCGAATGTGAATCAGAA+GGG | - | chr7_3:57353001-57353020 | Msa1111640:intron | 35.0% | |
| ! | CGTGGAGGTTAGATTTTTAT+TGG | - | chr7_3:57353100-57353119 | Msa1111640:intron | 35.0% |
| !!! | TGCATTTTAGGATTGAATCG+TGG | - | chr7_3:57353157-57353176 | Msa1111640:intron | 35.0% |
| AGGTTTGTGCACGATTATTA+AGG | - | chr7_3:57353396-57353415 | Msa1111640:intron | 35.0% | |
| !! | TTCAAAATAAGTGTCGGGTA+AGG | + | chr7_3:57353660-57353679 | None:intergenic | 35.0% |
| CACACAATCCAAATATAGCA+AGG | + | chr7_3:57353774-57353793 | None:intergenic | 35.0% | |
| ! | CTTGCTATATTTGGATTGTG+TGG | - | chr7_3:57353772-57353791 | Msa1111640:intron | 35.0% |
| ! | GTCACATATGTTTGGAATCA+CGG | - | chr7_3:57353953-57353972 | Msa1111640:intron | 35.0% |
| TTGGAGCTTCAACAAAATCA+TGG | + | chr7_3:57354004-57354023 | None:intergenic | 35.0% | |
| ! | TATAGCTTTTGCCAAAAGCA+CGG | - | chr7_3:57354026-57354045 | Msa1111640:intron | 35.0% |
| AAACTGATTACACGCATGTT+TGG | + | chr7_3:57354087-57354106 | None:intergenic | 35.0% | |
| TATTAATTGGGTATGGATGG+TGG | - | chr7_3:57354134-57354153 | Msa1111640:intron | 35.0% | |
| ATTAATTGGGTATGGATGGT+GGG | - | chr7_3:57354135-57354154 | Msa1111640:intron | 35.0% | |
| TATTCCATCTCTAGACTGTA+TGG | - | chr7_3:57354239-57354258 | Msa1111640:intron | 35.0% | |
| ! | AGATTGCTACTTCACTTTGA+AGG | - | chr7_3:57354355-57354374 | Msa1111640:intron | 35.0% |
| AGAAGAAAGACTAATCACGA+TGG | - | chr7_3:57354430-57354449 | Msa1111640:CDS | 35.0% | |
| TTTACAACATTCCCTTCTTC+AGG | + | chr7_3:57354461-57354480 | None:intergenic | 35.0% | |
| ACAGGGTTGAGTATGAATTA+TGG | - | chr7_3:57354621-57354640 | Msa1111640:intron | 35.0% | |
| AAGTCTCAGTGTATAAACCA+CGG | - | chr7_3:57354809-57354828 | Msa1111640:intron | 35.0% | |
| CCTTTATTGAAATCTTGCTC+AGG | + | chr7_3:57354854-57354873 | None:intergenic | 35.0% | |
| CCTGAGCAAGATTTCAATAA+AGG | - | chr7_3:57354851-57354870 | Msa1111640:CDS | 35.0% | |
| ! | TTTAAAGTGGCGAATGAAAG+TGG | - | chr7_3:57354923-57354942 | Msa1111640:intron | 35.0% |
| AAGTAAATGACACAGAAGAG+GGG | + | chr7_3:57355174-57355193 | None:intergenic | 35.0% | |
| CAAAGTAAATGACACAGAAG+AGG | + | chr7_3:57355176-57355195 | None:intergenic | 35.0% | |
| !! | TTCTGTGTCATTTACTTTGC+AGG | - | chr7_3:57355177-57355196 | Msa1111640:intron | 35.0% |
| GAAGATAAAAGACTGTGTTG+GGG | - | chr7_3:57355212-57355231 | Msa1111640:intron | 35.0% | |
| ! | TGCCAATCTGAAATCAAAGT+TGG | + | chr7_3:57355378-57355397 | None:intergenic | 35.0% |
| ATAAACAACAGACAGTACAG+AGG | - | chr7_3:57355439-57355458 | Msa1111640:CDS | 35.0% | |
| !! | TGAAGTTTTCGACTGCTTTT+AGG | - | chr7_3:57355523-57355542 | Msa1111640:intron | 35.0% |
| ! | TAAGCAAATTGATGGTTCAG+TGG | + | chr7_3:57355602-57355621 | None:intergenic | 35.0% |
| AAGTTAGGAAAATGAAGACC+TGG | + | chr7_3:57355628-57355647 | None:intergenic | 35.0% | |
| ! | AATATCAATGAAGGAAGCAC+AGG | + | chr7_3:57355737-57355756 | None:intergenic | 35.0% |
| AACGAGTGTTTGGAAAACAA+TGG | - | chr7_3:57355813-57355832 | Msa1111640:intron | 35.0% | |
| CATCTAATATTACTGCATGC+AGG | - | chr7_3:57355856-57355875 | Msa1111640:CDS | 35.0% | |
| ATAATGTGCATGACAAGGTT+CGG | + | chr7_3:57355894-57355913 | None:intergenic | 35.0% | |
| TCACAATAATGTGCATGACA+AGG | + | chr7_3:57355899-57355918 | None:intergenic | 35.0% | |
| TAATTATAGGACACTTTCCG+TGG | - | chr7_3:57355982-57356001 | Msa1111640:intron | 35.0% | |
| ATACTCTCTGTGAAGGTAAA+TGG | - | chr7_3:57356058-57356077 | Msa1111640:CDS | 35.0% | |
| !! | GATTTTGGTAGTTGAAAAGC+TGG | + | chr7_3:57356208-57356227 | None:intergenic | 35.0% |
| AAGTGGATGAGAAACAAAAG+AGG | + | chr7_3:57356254-57356273 | None:intergenic | 35.0% | |
| ! | TCCTTGTAGTTTTTGCGTTA+AGG | - | chr7_3:57356308-57356327 | Msa1111640:CDS | 35.0% |
| TCCTTAACGCAAAAACTACA+AGG | + | chr7_3:57356312-57356331 | None:intergenic | 35.0% | |
| ATTGTTGAATTCGCAGCTTA+AGG | + | chr7_3:57356396-57356415 | None:intergenic | 35.0% | |
| TTAAGCTGCGAATTCAACAA+TGG | - | chr7_3:57356395-57356414 | Msa1111640:CDS | 35.0% | |
| AATTCAACAATGGAGGTTGT+TGG | - | chr7_3:57356405-57356424 | Msa1111640:CDS | 35.0% | |
| GATGAACAAGATAGCTTACA+TGG | + | chr7_3:57356466-57356485 | None:intergenic | 35.0% | |
| !! | TTATTTCTGTTACTGAGTGG+TGG | - | chr7_3:57356496-57356515 | Msa1111640:CDS | 35.0% |
| ATGCAGGATGACTATAGAAA+AGG | - | chr7_3:57356578-57356597 | Msa1111640:CDS | 35.0% | |
| ! | GTTACATACTCTCCCATTTT+TGG | - | chr7_3:57356651-57356670 | Msa1111640:CDS | 35.0% |
| !!! | CTTTCCACAACATTGGTTTT+AGG | + | chr7_3:57357004-57357023 | None:intergenic | 35.0% |
| GTTTGACAGTTTAAACCAAC+CGG | + | chr7_3:57357036-57357055 | None:intergenic | 35.0% | |
| ! | GTTGGTTTAAACTGTCAAAC+CGG | - | chr7_3:57357036-57357055 | Msa1111640:intron | 35.0% |
| !!! | TCTTATGACTGGTTTTGTAC+TGG | + | chr7_3:57357131-57357150 | None:intergenic | 35.0% |
| ACCAGTCATAAGAACCAATT+TGG | - | chr7_3:57357138-57357157 | Msa1111640:intron | 35.0% | |
| ! | TCCAAATTGGTTCTTATGAC+TGG | + | chr7_3:57357142-57357161 | None:intergenic | 35.0% |
| CTTGTCATTGGACCATTATT+TGG | + | chr7_3:57357228-57357247 | None:intergenic | 35.0% | |
| GAATCAACTGATGACTCATA+AGG | - | chr7_3:57357548-57357567 | Msa1111640:intron | 35.0% | |
| ! | ATTTTTCCCTCATGCTACAT+TGG | - | chr7_3:57357586-57357605 | Msa1111640:intron | 35.0% |
| ATACTCTTTGCATGCTTCTA+AGG | - | chr7_3:57357736-57357755 | Msa1111640:intron | 35.0% | |
| CTTCTTCAGTAGTGAGTATT+TGG | - | chr7_3:57357969-57357988 | Msa1111640:intron | 35.0% | |
| TTGGATGATTATCCTTGTGA+TGG | - | chr7_3:57357988-57358007 | Msa1111640:intron | 35.0% | |
| AAATGCATATCCTCCAGAAA+GGG | + | chr7_3:57358020-57358039 | None:intergenic | 35.0% | |
| AAAATGCATATCCTCCAGAA+AGG | + | chr7_3:57358021-57358040 | None:intergenic | 35.0% | |
| AATCCAGGTATGATTATTGC+AGG | - | chr7_3:57358051-57358070 | Msa1111640:intron | 35.0% | |
| TATTCTTCGCTTTCTCAATG+TGG | + | chr7_3:57358118-57358137 | None:intergenic | 35.0% | |
| ! | GAAGCAGCATAAAACTTTTC+AGG | + | chr7_3:57358216-57358235 | None:intergenic | 35.0% |
| !! | CTATTCAACTCAAGAGTGTT+TGG | + | chr7_3:57358294-57358313 | None:intergenic | 35.0% |
| CAGTAAATATGTAATGTCGG+TGG | + | chr7_3:57358365-57358384 | None:intergenic | 35.0% | |
| GGGCAGTAAATATGTAATGT+CGG | + | chr7_3:57358368-57358387 | None:intergenic | 35.0% | |
| TTAAAGCAGAACAAAGATGC+TGG | - | chr7_3:57358566-57358585 | Msa1111640:five_prime_UTR | 35.0% | |
| !! | TGCTGGTTCTTTGTTTCTTT+AGG | - | chr7_3:57358583-57358602 | Msa1111640:five_prime_UTR | 35.0% |
| TGTAAATCTCAACAATGTGG+TGG | - | chr7_3:57358617-57358636 | Msa1111640:five_prime_UTR | 35.0% | |
| GTCCTTTATCACTCCTAATT+TGG | - | chr7_3:57358707-57358726 | Msa1111640:five_prime_UTR | 35.0% | |
| AGCCAAATTAGGAGTGATAA+AGG | + | chr7_3:57358712-57358731 | None:intergenic | 35.0% | |
| !!! | GAAGCTTTTTGGGTTGATGA+AGG | + | chr7_3:57352672-57352691 | None:intergenic | 40.0% |
| !!! | TTCTGGAGTGTTGTTTTGGT+AGG | - | chr7_3:57352855-57352874 | Msa1111640:CDS | 40.0% |
| CACTTCACCAAAATCGTTGA+AGG | - | chr7_3:57352907-57352926 | Msa1111640:intron | 40.0% | |
| GGTAGTTATGAATGCGCAAT+TGG | - | chr7_3:57352929-57352948 | Msa1111640:intron | 40.0% | |
| ! | TTTGGAGTTCCTCAATATGG+TGG | - | chr7_3:57352956-57352975 | Msa1111640:intron | 40.0% |
| ! | TCCTCAATATGGTGGAACAT+TGG | - | chr7_3:57352964-57352983 | Msa1111640:intron | 40.0% |
| ACCAATGTTCCACCATATTG+AGG | + | chr7_3:57352968-57352987 | None:intergenic | 40.0% | |
| ! | CAATATGGTGGAACATTGGT+TGG | - | chr7_3:57352968-57352987 | Msa1111640:intron | 40.0% |
| CATCCCTTCTGATTCACATT+CGG | + | chr7_3:57353007-57353026 | None:intergenic | 40.0% | |
| ACAAAGGTGGGAAAATTTCC+AGG | + | chr7_3:57353070-57353089 | None:intergenic | 40.0% | |
| CGATCAACAAGAACAAAGGT+GGG | + | chr7_3:57353082-57353101 | None:intergenic | 40.0% | |
| ACGATCAACAAGAACAAAGG+TGG | + | chr7_3:57353083-57353102 | None:intergenic | 40.0% | |
| ACCTTTGTTCTTGTTGATCG+TGG | - | chr7_3:57353082-57353101 | Msa1111640:intron | 40.0% | |
| TCCACGATCAACAAGAACAA+AGG | + | chr7_3:57353086-57353105 | None:intergenic | 40.0% | |
| TTTGTTCTTGTTGATCGTGG+AGG | - | chr7_3:57353085-57353104 | Msa1111640:intron | 40.0% | |
| GACTAATATTGTGAGACGGA+GGG | + | chr7_3:57353371-57353390 | None:intergenic | 40.0% | |
| TGACAATTATTGTGAGACGG+AGG | - | chr7_3:57353565-57353584 | Msa1111640:intron | 40.0% | |
| GACAATTATTGTGAGACGGA+GGG | - | chr7_3:57353566-57353585 | Msa1111640:intron | 40.0% | |
| CGGTGAGTTTGATGAATTCA+CGG | - | chr7_3:57353973-57353992 | Msa1111640:intron | 40.0% | |
| GAGCTTCAACAAAATCATGG+TGG | + | chr7_3:57354001-57354020 | None:intergenic | 40.0% | |
| ATATCGACGAATAGGTCGTT+AGG | - | chr7_3:57354275-57354294 | Msa1111640:intron | 40.0% | |
| GGAACAGAACAACAAAAGAG+TGG | - | chr7_3:57354296-57354315 | Msa1111640:intron | 40.0% | |
| GCAATCTGCCAAAATCAACA+GGG | + | chr7_3:57354342-57354361 | None:intergenic | 40.0% | |
| AGCAATCTGCCAAAATCAAC+AGG | + | chr7_3:57354343-57354362 | None:intergenic | 40.0% | |
| !! | GATTTGCTGATAAGAGCAGA+AGG | + | chr7_3:57354512-57354531 | None:intergenic | 40.0% |
| TGCTCTTATCAGCAAATCCT+TGG | - | chr7_3:57354514-57354533 | Msa1111640:intron | 40.0% | |
| GCTCTTATCAGCAAATCCTT+GGG | - | chr7_3:57354515-57354534 | Msa1111640:intron | 40.0% | |
| CTCTTATCAGCAAATCCTTG+GGG | - | chr7_3:57354516-57354535 | Msa1111640:intron | 40.0% | |
| TCTTATCAGCAAATCCTTGG+GGG | - | chr7_3:57354517-57354536 | Msa1111640:intron | 40.0% | |
| CATAAATCTTGATTGGCGAG+AGG | - | chr7_3:57354580-57354599 | Msa1111640:intron | 40.0% | |
| ACAAATAGCAACGACGAATG+TGG | - | chr7_3:57354644-57354663 | Msa1111640:intron | 40.0% | |
| CAAATAGCAACGACGAATGT+GGG | - | chr7_3:57354645-57354664 | Msa1111640:intron | 40.0% | |
| AGTCTCAGTGTATAAACCAC+GGG | - | chr7_3:57354810-57354829 | Msa1111640:intron | 40.0% | |
| ! | CCACTTTAAAGAAGCAAGCT+TGG | + | chr7_3:57354913-57354932 | None:intergenic | 40.0% |
| ! | CCAAGCTTGCTTCTTTAAAG+TGG | - | chr7_3:57354910-57354929 | Msa1111640:CDS | 40.0% |
| ! | TTTTCTCTTTCATGGGGCAA+CGG | + | chr7_3:57354991-57355010 | None:intergenic | 40.0% |
| AGTAAATGACACAGAAGAGG+GGG | + | chr7_3:57355173-57355192 | None:intergenic | 40.0% | |
| CAACAGAATGGTCGAATAAG+TGG | + | chr7_3:57355333-57355352 | None:intergenic | 40.0% | |
| CCTGGAGTTAAGCAAATTGA+TGG | + | chr7_3:57355610-57355629 | None:intergenic | 40.0% | |
| ! | CCATCAATTTGCTTAACTCC+AGG | - | chr7_3:57355607-57355626 | Msa1111640:intron | 40.0% |
| CATGGAAACAAACGAGTGTT+TGG | - | chr7_3:57355803-57355822 | Msa1111640:intron | 40.0% | |
| GAGTGTTTGGAAAACAATGG+TGG | - | chr7_3:57355816-57355835 | Msa1111640:intron | 40.0% | |
| TGGAAAACAATGGTGGTTGT+TGG | - | chr7_3:57355823-57355842 | Msa1111640:intron | 40.0% | |
| AAACAATGGTGGTTGTTGGA+AGG | - | chr7_3:57355827-57355846 | Msa1111640:intron | 40.0% | |
| ! | ATTACTGCATGCAGGGTATT+AGG | - | chr7_3:57355864-57355883 | Msa1111640:CDS | 40.0% |
| GATGGATATACTCTCTGTGA+AGG | - | chr7_3:57356051-57356070 | Msa1111640:CDS | 40.0% | |
| ! | AACTACCAAAATCGGTGCTT+GGG | - | chr7_3:57356215-57356234 | Msa1111640:intron | 40.0% |
| GTATGTAACCTTCACATGAC+TGG | + | chr7_3:57356640-57356659 | None:intergenic | 40.0% | |
| GATGTGTGTTTGTCATTCAC+TGG | + | chr7_3:57356692-57356711 | None:intergenic | 40.0% | |
| TCAGAGAGAGTTACTTCTCT+TGG | - | chr7_3:57356710-57356729 | Msa1111640:CDS | 40.0% | |
| CTTGGTGAACTAGTGCATAA+TGG | - | chr7_3:57356728-57356747 | Msa1111640:CDS | 40.0% | |
| TATGAGTGCAAGTGCAATAG+CGG | - | chr7_3:57356900-57356919 | Msa1111640:CDS | 40.0% | |
| CGAGAAAATGACACGTGTAT+TGG | - | chr7_3:57356936-57356955 | Msa1111640:CDS | 40.0% | |
| !!! | CACAACATTGGTTTTAGGAG+TGG | + | chr7_3:57356999-57357018 | None:intergenic | 40.0% |
| CACTCCTAAAACCAATGTTG+TGG | - | chr7_3:57356997-57357016 | Msa1111640:intron | 40.0% | |
| TCGGAGAGGATACTAATTCA+TGG | + | chr7_3:57357453-57357472 | None:intergenic | 40.0% | |
| AACCAGAATGGTCATTGGAT+CGG | + | chr7_3:57357472-57357491 | None:intergenic | 40.0% | |
| ACACTATCCAAACTGTTGTG+TGG | - | chr7_3:57357498-57357517 | Msa1111640:intron | 40.0% | |
| GAAAAGCCAATGTAGCATGA+GGG | + | chr7_3:57357595-57357614 | None:intergenic | 40.0% | |
| !! | CTTTTCTGCTTTTGTAGCGT+CGG | - | chr7_3:57357615-57357634 | Msa1111640:intron | 40.0% |
| !! | TTTTCTGCTTTTGTAGCGTC+GGG | - | chr7_3:57357616-57357635 | Msa1111640:intron | 40.0% |
| !! | TAGCGTCGGGTTTTTCTTTT+TGG | - | chr7_3:57357629-57357648 | Msa1111640:intron | 40.0% |
| !! | TCTTTTTGGAGAAGCTTGTC+AGG | - | chr7_3:57357643-57357662 | Msa1111640:intron | 40.0% |
| AAGCTTGTCAGGTTCCATTA+TGG | - | chr7_3:57357654-57357673 | Msa1111640:intron | 40.0% | |
| AAGCCTGCAATAATCATACC+TGG | + | chr7_3:57358057-57358076 | None:intergenic | 40.0% | |
| ! | TTTATGCTGCTTCATTCCCA+AGG | - | chr7_3:57358223-57358242 | Msa1111640:CDS | 40.0% |
| !! | TCAACTCAAGAGTGTTTGGA+TGG | + | chr7_3:57358290-57358309 | None:intergenic | 40.0% |
| CACTGAGATACGTGCAATTA+TGG | - | chr7_3:57358428-57358447 | Msa1111640:CDS | 40.0% | |
| GCAACTTGAGAAGCCAAATT+AGG | + | chr7_3:57358723-57358742 | None:intergenic | 40.0% | |
| AGAAGAGTGATGCGTGAGAA+AGG | + | chr7_3:57352628-57352647 | None:intergenic | 45.0% | |
| !! | TGGAACATTGGTTGGTTCTG+TGG | - | chr7_3:57352976-57352995 | Msa1111640:intron | 45.0% |
| TGCTAAAGTGAAACTCACGG+AGG | + | chr7_3:57353271-57353290 | None:intergenic | 45.0% | |
| CGACTAATATTGTGAGACGG+AGG | + | chr7_3:57353372-57353391 | None:intergenic | 45.0% | |
| ! | GCGATATTTCACCGTGCTTT+TGG | + | chr7_3:57354040-57354059 | None:intergenic | 45.0% |
| AAGGCGTGGAATGCACAAAA+TGG | - | chr7_3:57354374-57354393 | Msa1111640:CDS | 45.0% | |
| CTTCTTGATTCTATCCCCCA+AGG | + | chr7_3:57354534-57354553 | None:intergenic | 45.0% | |
| CTTGGGGGATAGAATCAAGA+AGG | - | chr7_3:57354532-57354551 | Msa1111640:intron | 45.0% | |
| ATCAAGAAGGCTCTCTCAGA+TGG | - | chr7_3:57354545-57354564 | Msa1111640:intron | 45.0% | |
| TCAAGAAGGCTCTCTCAGAT+GGG | - | chr7_3:57354546-57354565 | Msa1111640:intron | 45.0% | |
| TCTTCCACATCCTGATGACA+GGG | - | chr7_3:57354604-57354623 | Msa1111640:intron | 45.0% | |
| TCATACTCAACCCTGTCATC+AGG | + | chr7_3:57354617-57354636 | None:intergenic | 45.0% | |
| AGCTCAGCTACTTGAGAAGA+AGG | - | chr7_3:57354715-57354734 | Msa1111640:intron | 45.0% | |
| GCTCAGCTACTTGAGAAGAA+GGG | - | chr7_3:57354716-57354735 | Msa1111640:intron | 45.0% | |
| CTCAGCTACTTGAGAAGAAG+GGG | - | chr7_3:57354717-57354736 | Msa1111640:intron | 45.0% | |
| TTGAAATCTTGCTCAGGGTC+CGG | + | chr7_3:57354848-57354867 | None:intergenic | 45.0% | |
| CGAATGAAAGTGGAAGACCT+TGG | - | chr7_3:57354933-57354952 | Msa1111640:intron | 45.0% | |
| AAAGTGGAAGACCTTGGCAA+TGG | - | chr7_3:57354939-57354958 | Msa1111640:intron | 45.0% | |
| ACATAATCCCACCATTGCCA+AGG | + | chr7_3:57354953-57354972 | None:intergenic | 45.0% | |
| GTAAATGACACAGAAGAGGG+GGG | + | chr7_3:57355172-57355191 | None:intergenic | 45.0% | |
| ! | GGGTTTTCAACATCAGCAAG+AGG | + | chr7_3:57355240-57355259 | None:intergenic | 45.0% |
| !! | CTTGTTCGGCTTTGAGAACA+GGG | + | chr7_3:57355260-57355279 | None:intergenic | 45.0% |
| !! | TCTTGTTCGGCTTTGAGAAC+AGG | + | chr7_3:57355261-57355280 | None:intergenic | 45.0% |
| ACCAACCTGTGCTTCTTGTT+CGG | + | chr7_3:57355274-57355293 | None:intergenic | 45.0% | |
| ! | ACAGACAGTACAGAGGTATG+AGG | - | chr7_3:57355446-57355465 | Msa1111640:CDS | 45.0% |
| AGGTAAGTTGTCAAGACCAG+CGG | - | chr7_3:57355543-57355562 | Msa1111640:intron | 45.0% | |
| GTTCTCAAGGCAATATGTGC+AGG | - | chr7_3:57355565-57355584 | Msa1111640:intron | 45.0% | |
| ! | TTGATGGTTCAGTGGTCTCT+TGG | + | chr7_3:57355594-57355613 | None:intergenic | 45.0% |
| ! | TCAATGAAGGAAGCACAGGT+TGG | + | chr7_3:57355733-57355752 | None:intergenic | 45.0% |
| GGCATACACATACTCTTCCA+CGG | + | chr7_3:57356002-57356021 | None:intergenic | 45.0% | |
| ! | CAACTACCAAAATCGGTGCT+TGG | - | chr7_3:57356214-57356233 | Msa1111640:intron | 45.0% |
| ! | ACTACCAAAATCGGTGCTTG+GGG | - | chr7_3:57356216-57356235 | Msa1111640:intron | 45.0% |
| AGCTGCGAATTCAACAATGG+AGG | - | chr7_3:57356398-57356417 | Msa1111640:CDS | 45.0% | |
| AGAGTAAAGCCTTCCACCAT+GGG | + | chr7_3:57356438-57356457 | None:intergenic | 45.0% | |
| TGCATTTGCATTGTGGACAC+TGG | + | chr7_3:57356863-57356882 | None:intergenic | 45.0% | |
| CTTGCACTCATAACTCCCAA+AGG | + | chr7_3:57356892-57356911 | None:intergenic | 45.0% | |
| TCCAAACTGTTGTGTGGACT+TGG | - | chr7_3:57357504-57357523 | Msa1111640:intron | 45.0% | |
| ACCAAGTCCACACAACAGTT+TGG | + | chr7_3:57357508-57357527 | None:intergenic | 45.0% | |
| GGAAAAGCCAATGTAGCATG+AGG | + | chr7_3:57357596-57357615 | None:intergenic | 45.0% | |
| CGACGCTACAAAAGCAGAAA+AGG | + | chr7_3:57357617-57357636 | None:intergenic | 45.0% | |
| AAAGGGTAACGACCATCACA+AGG | + | chr7_3:57358003-57358022 | None:intergenic | 45.0% | |
| TCGCTTTCTCAATGTGGCAT+TGG | + | chr7_3:57358112-57358131 | None:intergenic | 45.0% | |
| TATGGCTCAATACATGCCCT+TGG | - | chr7_3:57358446-57358465 | Msa1111640:CDS | 45.0% | |
| !!! | TTTTTTTTTTTGTTTTTTAA+AGG | + | chr7_3:57357835-57357854 | None:intergenic | 5.0% |
| AAAGGAAGGTGACCCAGATG+AGG | + | chr7_3:57352720-57352739 | None:intergenic | 50.0% | |
| GCTTCGTTTCATTCCATGCC+TGG | - | chr7_3:57353049-57353068 | Msa1111640:intron | 50.0% | |
| GGTGGGAAAATTTCCAGGCA+TGG | + | chr7_3:57353065-57353084 | None:intergenic | 50.0% | |
| AGACGGAGGGAGTAACAACA+TGG | - | chr7_3:57353579-57353598 | Msa1111640:intron | 50.0% | |
| GACGGAGGGAGTAACAACAT+GGG | - | chr7_3:57353580-57353599 | Msa1111640:intron | 50.0% | |
| ACGGAGGGAGTAACAACATG+GGG | - | chr7_3:57353581-57353600 | Msa1111640:intron | 50.0% | |
| GACGCCATACAGTCTAGAGA+TGG | + | chr7_3:57354246-57354265 | None:intergenic | 50.0% | |
| ! | GCTACTTCACTTTGAAGGCG+TGG | - | chr7_3:57354360-57354379 | Msa1111640:CDS | 50.0% |
| GCGTGGAATGCACAAAATGG+TGG | - | chr7_3:57354377-57354396 | Msa1111640:CDS | 50.0% | |
| ACGATGGACACTCCTGAAGA+AGG | - | chr7_3:57354446-57354465 | Msa1111640:CDS | 50.0% | |
| CGATGGACACTCCTGAAGAA+GGG | - | chr7_3:57354447-57354466 | Msa1111640:CDS | 50.0% | |
| CAAGAAGGCTCTCTCAGATG+GGG | - | chr7_3:57354547-57354566 | Msa1111640:intron | 50.0% | |
| CTCTTCCACATCCTGATGAC+AGG | - | chr7_3:57354603-57354622 | Msa1111640:intron | 50.0% | |
| TCAACCCTGTCATCAGGATG+TGG | + | chr7_3:57354611-57354630 | None:intergenic | 50.0% | |
| CTCAGTGTATAAACCACGGG+CGG | - | chr7_3:57354813-57354832 | Msa1111640:intron | 50.0% | |
| TGGAAGACCTTGGCAATGGT+GGG | - | chr7_3:57354943-57354962 | Msa1111640:intron | 50.0% | |
| !! | GGGGCAACGGATTGAAAAGT+CGG | + | chr7_3:57354978-57354997 | None:intergenic | 50.0% |
| ! | CAAAGCCGAACAAGAAGCAC+AGG | - | chr7_3:57355266-57355285 | Msa1111640:CDS | 50.0% |
| CAGATTGGCAAAGAGTCTCG+TGG | - | chr7_3:57355388-57355407 | Msa1111640:intron | 50.0% | |
| CATATTGCCTTGAGAACCGC+TGG | + | chr7_3:57355562-57355581 | None:intergenic | 50.0% | |
| !!! | TTGACCCCAAGCACCGATTT+TGG | + | chr7_3:57356223-57356242 | None:intergenic | 50.0% |
| !! | GGTTGTTGGAAAGCATCCCA+TGG | - | chr7_3:57356419-57356438 | Msa1111640:CDS | 50.0% |
| !! | TGTTGGAAAGCATCCCATGG+TGG | - | chr7_3:57356422-57356441 | Msa1111640:CDS | 50.0% |
| CAGAGTAAAGCCTTCCACCA+TGG | + | chr7_3:57356439-57356458 | None:intergenic | 50.0% | |
| TTTGCATTGTGGACACTGGC+AGG | + | chr7_3:57356859-57356878 | None:intergenic | 50.0% | |
| TGGCGTGCTTTCCACAACAT+TGG | + | chr7_3:57357011-57357030 | None:intergenic | 50.0% | |
| ! | AATGTTGTGGAAAGCACGCC+AGG | - | chr7_3:57357010-57357029 | Msa1111640:intron | 50.0% |
| ACAGTTTAAACCAACCGGCC+TGG | + | chr7_3:57357031-57357050 | None:intergenic | 50.0% | |
| TTTGCGAGAAGCTTCTGGTG+GGG | + | chr7_3:57357108-57357127 | None:intergenic | 50.0% | |
| GTTTGCGAGAAGCTTCTGGT+GGG | + | chr7_3:57357109-57357128 | None:intergenic | 50.0% | |
| !! | ACTGGTTTGCGAGAAGCTTC+TGG | + | chr7_3:57357113-57357132 | None:intergenic | 50.0% |
| GAATGGTCATTGGATCGGAG+AGG | + | chr7_3:57357467-57357486 | None:intergenic | 50.0% | |
| CTCCGATCCAATGACCATTC+TGG | - | chr7_3:57357467-57357486 | Msa1111640:intron | 50.0% | |
| GTGATGGTCGTTACCCTTTC+TGG | - | chr7_3:57358004-57358023 | Msa1111640:intron | 50.0% | |
| ATGGTCGTTACCCTTTCTGG+AGG | - | chr7_3:57358007-57358026 | Msa1111640:intron | 50.0% | |
| ! | TGTGATCCTACCTGACTCGA+GGG | + | chr7_3:57358176-57358195 | None:intergenic | 50.0% |
| ! | ATGTGATCCTACCTGACTCG+AGG | + | chr7_3:57358177-57358196 | None:intergenic | 50.0% |
| GTCAGGTAGGATCACATGAG+CGG | - | chr7_3:57358180-57358199 | Msa1111640:intron | 50.0% | |
| CGGAGGGAGTAACAACATGG+GGG | - | chr7_3:57353582-57353601 | Msa1111640:intron | 55.0% | |
| GTGGAAGACCTTGGCAATGG+TGG | - | chr7_3:57354942-57354961 | Msa1111640:intron | 55.0% | |
| TGACACAGAAGAGGGGGGAA+GGG | + | chr7_3:57355167-57355186 | None:intergenic | 55.0% | |
| ATGACACAGAAGAGGGGGGA+AGG | + | chr7_3:57355168-57355187 | None:intergenic | 55.0% | |
| ! | GCCGAACAAGAAGCACAGGT+TGG | - | chr7_3:57355270-57355289 | Msa1111640:CDS | 55.0% |
| GTCAAGACCAGCGGTTCTCA+AGG | - | chr7_3:57355552-57355571 | Msa1111640:intron | 55.0% | |
| !! | GGAAAGCATCCCATGGTGGA+AGG | - | chr7_3:57356426-57356445 | Msa1111640:CDS | 55.0% |
| AAAGGTTGCGAGTGTCCGTC+AGG | - | chr7_3:57356596-57356615 | Msa1111640:CDS | 55.0% | |
| AAGGTTGCGAGTGTCCGTCA+GGG | - | chr7_3:57356597-57356616 | Msa1111640:CDS | 55.0% | |
| GACGGAGTCCAGTCATGTGA+AGG | - | chr7_3:57356629-57356648 | Msa1111640:CDS | 55.0% | |
| GGTTTGCGAGAAGCTTCTGG+TGG | + | chr7_3:57357110-57357129 | None:intergenic | 55.0% | |
| ! | TCCTACCTGACTCGAGGGTT+CGG | + | chr7_3:57358171-57358190 | None:intergenic | 55.0% |
| GGCTCTCTCAGATGGGGAGA+TGG | - | chr7_3:57354553-57354572 | Msa1111640:intron | 60.0% | |
| ACAGAAGAGGGGGGAAGGGA+GGG | + | chr7_3:57355163-57355182 | None:intergenic | 60.0% | |
| GAGTGTCCGTCAGGGTTCAG+AGG | - | chr7_3:57356605-57356624 | Msa1111640:CDS | 60.0% | |
| CCGTCACCTCTGAACCCTGA+CGG | + | chr7_3:57356614-57356633 | None:intergenic | 60.0% | |
| CCGTCAGGGTTCAGAGGTGA+CGG | - | chr7_3:57356611-57356630 | Msa1111640:CDS | 60.0% | |
| ! | TTGTGGAAAGCACGCCAGGC+CGG | - | chr7_3:57357014-57357033 | Msa1111640:intron | 60.0% |
| AGTGTCCGAACCCTCGAGTC+AGG | - | chr7_3:57358163-57358182 | Msa1111640:intron | 60.0% | |
| TCCGAACCCTCGAGTCAGGT+AGG | - | chr7_3:57358167-57358186 | Msa1111640:intron | 60.0% | |
| CACAGAAGAGGGGGGAAGGG+AGG | + | chr7_3:57355164-57355183 | None:intergenic | 65.0% | |
| CCACGGGCGGTACTGTGCTC+CGG | - | chr7_3:57354826-57354845 | Msa1111640:intron | 70.0% | |
| ! | GGAAAGCACGCCAGGCCGGT+TGG | - | chr7_3:57357018-57357037 | Msa1111640:intron | 70.0% |
| CCGGAGCACAGTACCGCCCG+TGG | + | chr7_3:57354829-57354848 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 57352552 | 57358762 | 57352552 | ID=Msa1111640;Name=Msa1111640 |
| chr7_3 | mRNA | 57352552 | 57358762 | 57352552 | ID=Msa1111640-mRNA-1;Parent=Msa1111640;Name=Msa1111640-mRNA-1;_AED=0.08;_eAED=0.08;_QI=257|0.90|0.91|1|1|1|12|241|637 |
| chr7_3 | exon | 57352552 | 57352897 | 57352552 | ID=Msa1111640-mRNA-1:exon:12334;Parent=Msa1111640-mRNA-1 |
| chr7_3 | exon | 57353257 | 57353354 | 57353257 | ID=Msa1111640-mRNA-1:exon:12333;Parent=Msa1111640-mRNA-1 |
| chr7_3 | exon | 57354357 | 57354485 | 57354357 | ID=Msa1111640-mRNA-1:exon:12332;Parent=Msa1111640-mRNA-1 |
| chr7_3 | exon | 57354664 | 57354730 | 57354664 | ID=Msa1111640-mRNA-1:exon:12331;Parent=Msa1111640-mRNA-1 |
| chr7_3 | exon | 57354848 | 57354930 | 57354848 | ID=Msa1111640-mRNA-1:exon:12330;Parent=Msa1111640-mRNA-1 |
| chr7_3 | exon | 57355242 | 57355323 | 57355242 | ID=Msa1111640-mRNA-1:exon:12329;Parent=Msa1111640-mRNA-1 |
| chr7_3 | exon | 57355436 | 57355512 | 57355436 | ID=Msa1111640-mRNA-1:exon:12328;Parent=Msa1111640-mRNA-1 |
| chr7_3 | exon | 57355650 | 57355769 | 57355650 | ID=Msa1111640-mRNA-1:exon:12327;Parent=Msa1111640-mRNA-1 |
| chr7_3 | exon | 57355854 | 57355923 | 57355854 | ID=Msa1111640-mRNA-1:exon:12326;Parent=Msa1111640-mRNA-1 |
| chr7_3 | exon | 57356027 | 57356115 | 57356027 | ID=Msa1111640-mRNA-1:exon:12325;Parent=Msa1111640-mRNA-1 |
| chr7_3 | exon | 57356262 | 57356957 | 57356262 | ID=Msa1111640-mRNA-1:exon:12324;Parent=Msa1111640-mRNA-1 |
| chr7_3 | exon | 57358208 | 57358762 | 57358208 | ID=Msa1111640-mRNA-1:exon:12323;Parent=Msa1111640-mRNA-1 |
| chr7_3 | five_prime_UTR | 57358506 | 57358762 | 57358506 | ID=Msa1111640-mRNA-1:five_prime_utr;Parent=Msa1111640-mRNA-1 |
| chr7_3 | CDS | 57358208 | 57358505 | 57358208 | ID=Msa1111640-mRNA-1:cds;Parent=Msa1111640-mRNA-1 |
| chr7_3 | CDS | 57356262 | 57356957 | 57356262 | ID=Msa1111640-mRNA-1:cds;Parent=Msa1111640-mRNA-1 |
| chr7_3 | CDS | 57356027 | 57356115 | 57356027 | ID=Msa1111640-mRNA-1:cds;Parent=Msa1111640-mRNA-1 |
| chr7_3 | CDS | 57355854 | 57355923 | 57355854 | ID=Msa1111640-mRNA-1:cds;Parent=Msa1111640-mRNA-1 |
| chr7_3 | CDS | 57355650 | 57355769 | 57355650 | ID=Msa1111640-mRNA-1:cds;Parent=Msa1111640-mRNA-1 |
| chr7_3 | CDS | 57355436 | 57355512 | 57355436 | ID=Msa1111640-mRNA-1:cds;Parent=Msa1111640-mRNA-1 |
| chr7_3 | CDS | 57355242 | 57355323 | 57355242 | ID=Msa1111640-mRNA-1:cds;Parent=Msa1111640-mRNA-1 |
| chr7_3 | CDS | 57354848 | 57354930 | 57354848 | ID=Msa1111640-mRNA-1:cds;Parent=Msa1111640-mRNA-1 |
| chr7_3 | CDS | 57354664 | 57354730 | 57354664 | ID=Msa1111640-mRNA-1:cds;Parent=Msa1111640-mRNA-1 |
| chr7_3 | CDS | 57354357 | 57354485 | 57354357 | ID=Msa1111640-mRNA-1:cds;Parent=Msa1111640-mRNA-1 |
| chr7_3 | CDS | 57353257 | 57353354 | 57353257 | ID=Msa1111640-mRNA-1:cds;Parent=Msa1111640-mRNA-1 |
| chr7_3 | CDS | 57352793 | 57352897 | 57352793 | ID=Msa1111640-mRNA-1:cds;Parent=Msa1111640-mRNA-1 |
| chr7_3 | three_prime_UTR | 57352552 | 57352792 | 57352552 | ID=Msa1111640-mRNA-1:three_prime_utr;Parent=Msa1111640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
