Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167180 | XP_003623631.1 | 96.860 | 637 | 8 | 1 | 1 | 637 | 1 | 625 | 0.0 | 1275 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167180 | sp|P93026|VSR1_ARATH | 69.062 | 640 | 176 | 6 | 3 | 637 | 1 | 623 | 0.0 | 911 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167180 | G7KY61 | 96.860 | 637 | 8 | 1 | 1 | 637 | 1 | 625 | 0.0 | 1275 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0221540 | Msa1167180 | 0.804637 | 1.963457e-49 | -8.615850e-47 |
| Msa1026480 | Msa1167180 | 0.831813 | 1.348996e-55 | -8.615850e-47 |
| Msa1111640 | Msa1167180 | 0.970929 | 2.272058e-132 | -8.615850e-47 |
| Msa1167180 | Msa1322680 | 0.805569 | 1.253005e-49 | -8.615850e-47 |
| Msa1167180 | Msa1322720 | 0.811199 | 7.889695e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167180 | MtrunA17_Chr7g0244951 | 96.860 | 637 | 8 | 1 | 1 | 637 | 1 | 625 | 0.0 | 1275 |
| Msa1167180 | MtrunA17_Chr8g0334591 | 75.079 | 634 | 139 | 4 | 8 | 637 | 7 | 625 | 0.0 | 1007 |
| Msa1167180 | MtrunA17_Chr1g0207291 | 64.992 | 617 | 197 | 3 | 21 | 631 | 25 | 628 | 0.0 | 872 |
| Msa1167180 | MtrunA17_Chr5g0393731 | 63.380 | 639 | 212 | 6 | 1 | 635 | 3 | 623 | 0.0 | 860 |
| Msa1167180 | MtrunA17_Chr2g0296671 | 58.917 | 628 | 239 | 5 | 3 | 627 | 1 | 612 | 0.0 | 744 |
| Msa1167180 | MtrunA17_Chr3g0133721 | 58.140 | 43 | 18 | 0 | 21 | 63 | 25 | 67 | 1.32e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1167180 | AT3G52850.1 | 69.062 | 640 | 176 | 6 | 3 | 637 | 1 | 623 | 0.0 | 911 |
| Msa1167180 | AT2G30290.1 | 66.667 | 621 | 191 | 3 | 7 | 624 | 8 | 615 | 0.0 | 895 |
| Msa1167180 | AT2G30290.2 | 66.667 | 621 | 191 | 3 | 7 | 624 | 8 | 615 | 0.0 | 894 |
| Msa1167180 | AT2G14720.1 | 66.667 | 612 | 186 | 4 | 22 | 629 | 24 | 621 | 0.0 | 880 |
| Msa1167180 | AT2G14720.2 | 66.667 | 612 | 186 | 4 | 22 | 629 | 24 | 621 | 0.0 | 880 |
| Msa1167180 | AT2G14740.2 | 66.074 | 619 | 190 | 4 | 22 | 636 | 24 | 626 | 0.0 | 879 |
| Msa1167180 | AT2G14740.1 | 66.074 | 619 | 190 | 4 | 22 | 636 | 24 | 626 | 0.0 | 879 |
| Msa1167180 | AT1G30900.1 | 56.804 | 632 | 251 | 6 | 7 | 635 | 10 | 622 | 0.0 | 757 |
| Msa1167180 | AT4G20110.1 | 56.704 | 619 | 246 | 6 | 8 | 623 | 12 | 611 | 0.0 | 746 |
| Msa1167180 | AT4G20110.2 | 56.019 | 623 | 247 | 8 | 8 | 623 | 12 | 614 | 0.0 | 730 |
| Msa1167180 | AT2G34940.1 | 54.662 | 622 | 257 | 7 | 8 | 625 | 12 | 612 | 0.0 | 711 |
Find 167 sgRNAs with CRISPR-Local
Find 399 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGATGGTCGTTACCCTTTC+TGG | 0.105774 | 7_4:-59507875 | Msa1167180:CDS |
| CTTCTTCAGTAGTGAGTATT+TGG | 0.126902 | 7_4:-59507910 | Msa1167180:CDS |
| TAACTACCCTTCAACGATTT+TGG | 0.143231 | 7_4:+59512773 | None:intergenic |
| GAATGTGCAATTGGAAATTT+TGG | 0.147362 | 7_4:-59512749 | Msa1167180:CDS |
| GTCCTTTATCACTCCTAATT+TGG | 0.157985 | 7_4:-59507172 | Msa1167180:three_prime_UTR |
| TTTGGGATGATGAAGGTTTA+AGG | 0.216419 | 7_4:+59513025 | None:intergenic |
| CAATCTTCAATTTCCTCATC+TGG | 0.222809 | 7_4:-59512983 | Msa1167180:five_prime_UTR |
| CACTGAGATACGTGCAATTA+TGG | 0.263270 | 7_4:-59507451 | Msa1167180:CDS |
| GTAATTAATGCAGCTTAGTT+TGG | 0.281048 | 7_4:+59512940 | None:intergenic |
| CATCCTTTCTGATTCACATT+AGG | 0.291745 | 7_4:+59512683 | None:intergenic |
| CCTGAGCAAGATTTCAATAA+AGG | 0.301302 | 7_4:-59511028 | Msa1167180:CDS |
| TGCTGGTTCTTTGTTTCTTT+AGG | 0.301653 | 7_4:-59507296 | Msa1167180:three_prime_UTR |
| TCTTGTTCGGCTTTGAGAAC+AGG | 0.307945 | 7_4:+59510621 | None:intergenic |
| TTTACAACATTCCCTTCTTC+AGG | 0.309345 | 7_4:+59511421 | None:intergenic |
| AACTTAATATTGTTTACAAC+AGG | 0.326723 | 7_4:+59509858 | None:intergenic |
| GCAACTTGAGAAGCCAAATT+AGG | 0.327426 | 7_4:+59507159 | None:intergenic |
| TTATTCTGTGCAGAGATATA+TGG | 0.332728 | 7_4:-59507475 | Msa1167180:intron |
| TGCTCTTATCAGCAAATCCT+TGG | 0.344144 | 7_4:-59511365 | Msa1167180:CDS |
| ATATCATGATGAACTTGATT+AGG | 0.359207 | 7_4:+59507384 | None:intergenic |
| GTAAACAATATTAAGTTTGT+TGG | 0.361870 | 7_4:-59509852 | Msa1167180:CDS |
| TGATGAACTTGATTAGGATT+AGG | 0.367926 | 7_4:+59507390 | None:intergenic |
| CATGGAAACAAACGAGTGTT+TGG | 0.368306 | 7_4:-59510076 | Msa1167180:CDS |
| AGAAGATAAAAGACTGTGTT+GGG | 0.368316 | 7_4:-59510668 | Msa1167180:CDS |
| ACAGGGTTGAGTATGAATTA+TGG | 0.372106 | 7_4:-59511258 | Msa1167180:CDS |
| ACCAACCTGTGCTTCTTGTT+CGG | 0.378475 | 7_4:+59510608 | None:intergenic |
| AGAAGAGTGATGCGTGAGAA+AGG | 0.389452 | 7_4:+59513064 | None:intergenic |
| GATGAAGGTTTAAGGTTATG+TGG | 0.389460 | 7_4:+59513033 | None:intergenic |
| CCTGGAGTTAAGCAAATTGA+TGG | 0.390535 | 7_4:+59510272 | None:intergenic |
| TTGATGGTTCAGTGGTCTCT+TGG | 0.397813 | 7_4:+59510288 | None:intergenic |
| ATTGTTGAATTCGCAGCTTA+AGG | 0.399943 | 7_4:+59509486 | None:intergenic |
| GGTAGTTATGAATGTGCAAT+TGG | 0.400025 | 7_4:-59512758 | Msa1167180:CDS |
| AGCCAAATTAGGAGTGATAA+AGG | 0.408701 | 7_4:+59507170 | None:intergenic |
| GCTCTTATCAGCAAATCCTT+GGG | 0.416358 | 7_4:-59511364 | Msa1167180:CDS |
| CCTTTATTGAAATCTTGCTC+AGG | 0.426180 | 7_4:+59511028 | None:intergenic |
| CTCTTCCACATCCTGATGAC+AGG | 0.430772 | 7_4:-59511276 | Msa1167180:CDS |
| CAGTATGGTGGAACATTGGT+TGG | 0.431811 | 7_4:-59512719 | Msa1167180:CDS |
| ACAAAGGTGGGAAAATTTCC+AGG | 0.432696 | 7_4:+59512620 | None:intergenic |
| AGCTCAGCTACTTGAGAAGA+AGG | 0.435515 | 7_4:-59511164 | Msa1167180:CDS |
| CTGAGCAAGATTTCAATAAA+GGG | 0.435569 | 7_4:-59511027 | Msa1167180:CDS |
| AAAGGTTGCGAGTGTCCGTC+AGG | 0.439256 | 7_4:-59509283 | Msa1167180:CDS |
| CCAAGCTTGCTTCTTTAAAG+TGG | 0.439377 | 7_4:-59510969 | Msa1167180:CDS |
| GCTTAGTTTGGATGAAGAAA+AGG | 0.441045 | 7_4:+59512952 | None:intergenic |
| TTGAAATCTTGCTCAGGGTC+CGG | 0.441580 | 7_4:+59511034 | None:intergenic |
| AATATTAAGTTTGTTGGCGA+TGG | 0.451246 | 7_4:-59509846 | Msa1167180:CDS |
| TGGTTCACATAAATCTTGAT+TGG | 0.451802 | 7_4:-59511306 | Msa1167180:CDS |
| CACTTCTCCAAAATCGTTGA+AGG | 0.456048 | 7_4:-59512780 | Msa1167180:CDS |
| TCATACTCAACCCTGTCATC+AGG | 0.459677 | 7_4:+59511265 | None:intergenic |
| AATTCAACAATGGAGGTTGT+TGG | 0.462807 | 7_4:-59509474 | Msa1167180:CDS |
| TTAGGATTAGGAACAATAAG+AGG | 0.470855 | 7_4:+59507402 | None:intergenic |
| AGATTGCTACTTCACTTTGA+AGG | 0.470938 | 7_4:-59511524 | Msa1167180:CDS |
| CTTGTTCGGCTTTGAGAACA+GGG | 0.471659 | 7_4:+59510622 | None:intergenic |
| TTAATTTGATTGTCACACTT+TGG | 0.473837 | 7_4:+59511211 | None:intergenic |
| CATCTAATATTACTGCATGC+AGG | 0.475744 | 7_4:-59510023 | Msa1167180:CDS |
| GCTTCGTTTCATTCCATGCC+TGG | 0.475933 | 7_4:-59512638 | Msa1167180:CDS |
| CCACTTTAAAGAAGCAAGCT+TGG | 0.476108 | 7_4:+59510969 | None:intergenic |
| ACCTTTGTTCTTGTTGATCG+TGG | 0.481421 | 7_4:-59512605 | Msa1167180:CDS |
| AAGAAGATAAAAGACTGTGT+TGG | 0.484694 | 7_4:-59510669 | Msa1167180:CDS |
| CGAGAAAATGACACGTGTAT+TGG | 0.490067 | 7_4:-59508943 | Msa1167180:intron |
| AAGGCGTGGAATGCACAAAA+TGG | 0.491706 | 7_4:-59511505 | Msa1167180:CDS |
| TTATCCCACACTATATAACT+TGG | 0.492085 | 7_4:-59511129 | Msa1167180:CDS |
| TTTAAAGTGGCGAATGAAAG+TGG | 0.496449 | 7_4:-59510956 | Msa1167180:CDS |
| GATGAAGTTATTAAATCTCT+TGG | 0.496808 | 7_4:-59510848 | Msa1167180:intron |
| ATCAAGAAGGCTCTCTCAGA+TGG | 0.499559 | 7_4:-59511334 | Msa1167180:CDS |
| CTTTATTGAAATCTTGCTCA+GGG | 0.501895 | 7_4:+59511029 | None:intergenic |
| GGCTCTCTCAGATGGGGAGA+TGG | 0.501940 | 7_4:-59511326 | Msa1167180:CDS |
| GTATGTAACCTTCACATGAC+TGG | 0.501976 | 7_4:+59509242 | None:intergenic |
| AATCTTCAATTTCCTCATCT+GGG | 0.502206 | 7_4:-59512982 | Msa1167180:five_prime_UTR |
| TTTGCATTGTGGACACTGGC+AGG | 0.506969 | 7_4:+59509023 | None:intergenic |
| GTGGAAGACCTTGGCAATGG+TGG | 0.506991 | 7_4:-59510937 | Msa1167180:CDS |
| CCACGGGCGGTACTGTGCTC+CGG | 0.512798 | 7_4:-59511053 | Msa1167180:CDS |
| ATGCAGGATGACTATAGAAA+AGG | 0.516328 | 7_4:-59509301 | Msa1167180:intron |
| GTTCTCAAGGCAATATGTGC+AGG | 0.520823 | 7_4:-59510314 | Msa1167180:CDS |
| AATAAGAGGTTGATTATCCA+AGG | 0.521981 | 7_4:+59507416 | None:intergenic |
| ACGATGGACACTCCTGAAGA+AGG | 0.522488 | 7_4:-59511433 | Msa1167180:CDS |
| CCATCAATTTGCTTAACTCC+AGG | 0.523558 | 7_4:-59510272 | Msa1167180:CDS |
| GCACTATATTCTGTTCAAGC+GGG | 0.527587 | 7_4:-59507138 | None:intergenic |
| GATGAGGAAATTGAAGATTG+AGG | 0.529071 | 7_4:+59512986 | None:intergenic |
| TCAAGAAGGCTCTCTCAGAT+GGG | 0.529602 | 7_4:-59511333 | Msa1167180:CDS |
| ATGAAGGTTTAAGGTTATGT+GGG | 0.530755 | 7_4:+59513034 | None:intergenic |
| GATTTCAATAAAGGGTATGA+TGG | 0.532997 | 7_4:-59511019 | Msa1167180:CDS |
| CATATTGCCTTGAGAACCGC+TGG | 0.534405 | 7_4:+59510320 | None:intergenic |
| TGGAAAACAATGGTGGTTGT+TGG | 0.537222 | 7_4:-59510056 | Msa1167180:CDS |
| AAAATGCATATCCTCCAGAA+AGG | 0.538733 | 7_4:+59507861 | None:intergenic |
| ATCTAATATTACTGCATGCA+GGG | 0.543015 | 7_4:-59510022 | Msa1167180:intron |
| TATGGCTCAATACATGCCCT+TGG | 0.543355 | 7_4:-59507433 | Msa1167180:CDS |
| GCTCAGCTACTTGAGAAGAA+GGG | 0.546709 | 7_4:-59511163 | Msa1167180:CDS |
| GTCAAGACCAGCGGTTCTCA+AGG | 0.547528 | 7_4:-59510327 | Msa1167180:CDS |
| CTGTTGTTTATAACAAGAGT+AGG | 0.551175 | 7_4:+59510452 | None:intergenic |
| AAATGCATATCCTCCAGAAA+GGG | 0.551290 | 7_4:+59507862 | None:intergenic |
| TGCATTTGCATTGTGGACAC+TGG | 0.553776 | 7_4:+59509019 | None:intergenic |
| GGTGGGAAAATTTCCAGGCA+TGG | 0.555364 | 7_4:+59512625 | None:intergenic |
| TTGGATGATTATCCTTGTGA+TGG | 0.555886 | 7_4:-59507891 | Msa1167180:CDS |
| CCGTCAGGGTTCAGAGGTGA+CGG | 0.557248 | 7_4:-59509268 | Msa1167180:CDS |
| CAAATAGCAACGACGAATGT+GGG | 0.559355 | 7_4:-59511234 | Msa1167180:CDS |
| TTAAAGCAGAACAAAGATGC+TGG | 0.561915 | 7_4:-59507313 | Msa1167180:three_prime_UTR |
| AGAGTAAAGCCTTCCACCAT+GGG | 0.563287 | 7_4:+59509444 | None:intergenic |
| CGATGGACACTCCTGAAGAA+GGG | 0.566570 | 7_4:-59511432 | Msa1167180:CDS |
| TGCACTATATTCTGTTCAAG+CGG | 0.566801 | 7_4:-59507139 | Msa1167180:three_prime_UTR |
| AAAATACACAGAAGAATGCT+CGG | 0.568793 | 7_4:-59510870 | Msa1167180:CDS |
| GGGGCAACGGATTGAAAAGT+CGG | 0.570730 | 7_4:+59510904 | None:intergenic |
| ACAAATAGCAACGACGAATG+TGG | 0.574329 | 7_4:-59511235 | Msa1167180:CDS |
| GCCTCAGTATGGTGGAACAT+TGG | 0.574346 | 7_4:-59512723 | Msa1167180:CDS |
| CAAAGCCGAACAAGAAGCAC+AGG | 0.576950 | 7_4:-59510613 | Msa1167180:intron |
| CAATACCAAGTTATATAGTG+TGG | 0.577942 | 7_4:+59511124 | None:intergenic |
| TTTGGGGTGCCTCAGTATGG+TGG | 0.579942 | 7_4:-59512731 | Msa1167180:CDS |
| TGATGAATGCAAAGAAAAGT+CGG | 0.584040 | 7_4:-59509046 | Msa1167180:CDS |
| GGAAAGCATCCCATGGTGGA+AGG | 0.584360 | 7_4:-59509453 | Msa1167180:CDS |
| CTCTTATCAGCAAATCCTTG+GGG | 0.588160 | 7_4:-59511363 | Msa1167180:CDS |
| TCAACCCTGTCATCAGGATG+TGG | 0.588259 | 7_4:+59511271 | None:intergenic |
| CTCAGCTACTTGAGAAGAAG+GGG | 0.588622 | 7_4:-59511162 | Msa1167180:CDS |
| TGGAAGACCTTGGCAATGGT+GGG | 0.592844 | 7_4:-59510936 | Msa1167180:CDS |
| GCTACTTCACTTTGAAGGCG+TGG | 0.601050 | 7_4:-59511519 | Msa1167180:CDS |
| ACGATCAACAAGAACAAAGG+TGG | 0.601290 | 7_4:+59512607 | None:intergenic |
| CAGAGTAAAGCCTTCCACCA+TGG | 0.607568 | 7_4:+59509443 | None:intergenic |
| AGTCTCAGTGTATAAACCAC+GGG | 0.609852 | 7_4:-59511069 | Msa1167180:CDS |
| AATACCAAGTTATATAGTGT+GGG | 0.612094 | 7_4:+59511125 | None:intergenic |
| CACTATATTCTGTTCAAGCG+GGG | 0.612321 | 7_4:-59507137 | None:intergenic |
| GACGGAGTCCAGTCATGTGA+AGG | 0.612993 | 7_4:-59509250 | Msa1167180:intron |
| ACATAATCCCACCATTGCCA+AGG | 0.613400 | 7_4:+59510929 | None:intergenic |
| TAAGCAAATTGATGGTTCAG+TGG | 0.613644 | 7_4:+59510280 | None:intergenic |
| ACTTCTCCAAAATCGTTGAA+GGG | 0.614192 | 7_4:-59512779 | Msa1167180:CDS |
| TATGAGTGCAAGTGCAATAG+CGG | 0.618675 | 7_4:-59508979 | Msa1167180:CDS |
| AAGTTAGGAAAATGAAGACC+TGG | 0.619812 | 7_4:+59510254 | None:intergenic |
| GCGTGGAATGCACAAAATGG+TGG | 0.620339 | 7_4:-59511502 | Msa1167180:CDS |
| TCTTCCACATCCTGATGACA+GGG | 0.622361 | 7_4:-59511275 | Msa1167180:CDS |
| ATGGTCGTTACCCTTTCTGG+AGG | 0.623695 | 7_4:-59507872 | Msa1167180:CDS |
| TATCCTAATGTGAATCAGAA+AGG | 0.627846 | 7_4:-59512686 | Msa1167180:CDS |
| TAATTATAGGACACTTTCCG+TGG | 0.627983 | 7_4:-59509897 | Msa1167180:intron |
| GAGTGTCCGTCAGGGTTCAG+AGG | 0.628151 | 7_4:-59509274 | Msa1167180:CDS |
| CGATCAACAAGAACAAAGGT+GGG | 0.630851 | 7_4:+59512608 | None:intergenic |
| GGCATACACATACTCTTCCA+CGG | 0.632278 | 7_4:+59509880 | None:intergenic |
| GATTTGCTGATAAGAGCAGA+AGG | 0.632884 | 7_4:+59511370 | None:intergenic |
| CCGGAGCACAGTACCGCCCG+TGG | 0.634905 | 7_4:+59511053 | None:intergenic |
| ACTTAATATTGTTTACAACA+GGG | 0.639041 | 7_4:+59509859 | None:intergenic |
| AAACAATGGTGGTTGTTGGA+AGG | 0.640261 | 7_4:-59510052 | Msa1167180:CDS |
| CAAGAAGGCTCTCTCAGATG+GGG | 0.641398 | 7_4:-59511332 | Msa1167180:CDS |
| AGGTAAGTTGTCAAGACCAG+CGG | 0.644520 | 7_4:-59510336 | Msa1167180:CDS |
| CTTGCACTCATAACTCCCAA+AGG | 0.645113 | 7_4:+59508990 | None:intergenic |
| TTTGTTCTTGTTGATCGTGG+AGG | 0.646910 | 7_4:-59512602 | Msa1167180:intron |
| CAGATTGGCAAAGAGTCTCG+TGG | 0.647523 | 7_4:-59510491 | Msa1167180:CDS |
| CATAAATCTTGATTGGCGAG+AGG | 0.650628 | 7_4:-59511299 | Msa1167180:CDS |
| GATGGATATACTCTCTGTGA+AGG | 0.650944 | 7_4:-59509828 | Msa1167180:intron |
| AAAGGAAGGTGACCCAGATG+AGG | 0.654053 | 7_4:+59512970 | None:intergenic |
| AGCTGCGAATTCAACAATGG+AGG | 0.654911 | 7_4:-59509481 | Msa1167180:CDS |
| ATAAGAGGTTGATTATCCAA+GGG | 0.659505 | 7_4:+59507417 | None:intergenic |
| TTAAGCTGCGAATTCAACAA+TGG | 0.661033 | 7_4:-59509484 | Msa1167180:CDS |
| AAGGTTGCGAGTGTCCGTCA+GGG | 0.662883 | 7_4:-59509282 | Msa1167180:CDS |
| TCCACGATCAACAAGAACAA+AGG | 0.664109 | 7_4:+59512604 | None:intergenic |
| CGAATGAAAGTGGAAGACCT+TGG | 0.664715 | 7_4:-59510946 | Msa1167180:CDS |
| GAAGATAAAAGACTGTGTTG+GGG | 0.665853 | 7_4:-59510667 | Msa1167180:CDS |
| CCGTCACCTCTGAACCCTGA+CGG | 0.665940 | 7_4:+59509268 | None:intergenic |
| TGTAAATCTCAACAATGTGG+TGG | 0.667968 | 7_4:-59507262 | Msa1167180:three_prime_UTR |
| AAGTCTCAGTGTATAAACCA+CGG | 0.670031 | 7_4:-59511070 | Msa1167180:CDS |
| AGTTTGGATGAAGAAAAGGA+AGG | 0.670958 | 7_4:+59512956 | None:intergenic |
| ACATTGTTGAGATTTACAAG+AGG | 0.673620 | 7_4:+59507267 | None:intergenic |
| AAAGGGTAACGACCATCACA+AGG | 0.679891 | 7_4:+59507879 | None:intergenic |
| AACGAGTGTTTGGAAAACAA+TGG | 0.681450 | 7_4:-59510066 | Msa1167180:CDS |
| TCTTATCAGCAAATCCTTGG+GGG | 0.682194 | 7_4:-59511362 | Msa1167180:CDS |
| ACCAATGTTCCACCATACTG+AGG | 0.682763 | 7_4:+59512722 | None:intergenic |
| CTCAGTGTATAAACCACGGG+CGG | 0.687022 | 7_4:-59511066 | Msa1167180:CDS |
| AGAAGAAAGACTAATCACGA+TGG | 0.689699 | 7_4:-59511449 | Msa1167180:CDS |
| TCTTGTAAATCTCAACAATG+TGG | 0.690711 | 7_4:-59507265 | Msa1167180:three_prime_UTR |
| GGTTGTTGGAAAGCATCCCA+TGG | 0.695045 | 7_4:-59509460 | Msa1167180:CDS |
| GAGTGTTTGGAAAACAATGG+TGG | 0.707960 | 7_4:-59510063 | Msa1167180:CDS |
| TGTTGGAAAGCATCCCATGG+TGG | 0.716154 | 7_4:-59509457 | Msa1167180:CDS |
| AAAGTGGAAGACCTTGGCAA+TGG | 0.716769 | 7_4:-59510940 | Msa1167180:CDS |
| ATAAACAACAGACAGTACAG+AGG | 0.753536 | 7_4:-59510440 | Msa1167180:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAGTGAAATTTATTAAT+TGG | - | chr7_4:59508500-59508519 | Msa1167180:intron | 10.0% |
| !! | TTAAGTGAAATTTATTAATT+GGG | - | chr7_4:59508501-59508520 | Msa1167180:intron | 10.0% |
| !!! | CTATTTTTATTTTTTTAGTA+TGG | + | chr7_4:59508573-59508592 | None:intergenic | 10.0% |
| !!! | CACTAATTTTTTTTTTTTTT+TGG | + | chr7_4:59510531-59510550 | None:intergenic | 10.0% |
| !! | AATTCAATACAACTAAATAA+CGG | + | chr7_4:59509875-59509894 | None:intergenic | 15.0% |
| !!! | AAATTTGAAATCAAAAAGTT+AGG | + | chr7_4:59510022-59510041 | None:intergenic | 15.0% |
| !!! | AACTTTTTGATTTCAAATTT+TGG | - | chr7_4:59510022-59510041 | Msa1167180:intron | 15.0% |
| !!! | ATGTGTTTTTTCTTAATTAT+AGG | - | chr7_4:59510348-59510367 | Msa1167180:intron | 15.0% |
| !! | TAAAAATATAGAATCTAGAA+TGG | + | chr7_4:59510495-59510514 | None:intergenic | 15.0% |
| !! | AAAAATTGATAGATCTAAAA+AGG | - | chr7_4:59511450-59511469 | Msa1167180:CDS | 15.0% |
| !!! | TAGTCTTTTTTCAAATTTAT+TGG | - | chr7_4:59511541-59511560 | Msa1167180:intron | 15.0% |
| !! | GTACACAATGTATTAATTAA+GGG | + | chr7_4:59507898-59507917 | None:intergenic | 20.0% |
| !! | TGTACACAATGTATTAATTA+AGG | + | chr7_4:59507899-59507918 | None:intergenic | 20.0% |
| !! | ATTGATTAATAGTAACAACA+TGG | - | chr7_4:59507945-59507964 | Msa1167180:intron | 20.0% |
| !! | TTGATTAATAGTAACAACAT+GGG | - | chr7_4:59507946-59507965 | Msa1167180:intron | 20.0% |
| !!! | TAGAATTGCTTTATTTTCTT+TGG | - | chr7_4:59508203-59508222 | Msa1167180:intron | 20.0% |
| !! | TATATAGTGACATTGAAAAT+TGG | - | chr7_4:59508233-59508252 | Msa1167180:intron | 20.0% |
| !! | ATATAGTGACATTGAAAATT+GGG | - | chr7_4:59508234-59508253 | Msa1167180:intron | 20.0% |
| !!! | TAATCAGTTTCAATTTTCTT+TGG | - | chr7_4:59508476-59508495 | Msa1167180:intron | 20.0% |
| !!! | AATCAGTTTCAATTTTCTTT+GGG | - | chr7_4:59508477-59508496 | Msa1167180:intron | 20.0% |
| !! | TGAAATTTATTAATTGGGTA+TGG | - | chr7_4:59508506-59508525 | Msa1167180:intron | 20.0% |
| !!! | AAAAATAGAAACATGTTTTC+TGG | - | chr7_4:59508585-59508604 | Msa1167180:intron | 20.0% |
| !!! | AATTTTGTTAAGAGCTTTAA+AGG | - | chr7_4:59509068-59509087 | Msa1167180:intron | 20.0% |
| !! | CTGCTTAATAAAAATTCTTT+AGG | + | chr7_4:59509161-59509180 | None:intergenic | 20.0% |
| !! | TGAACATCATAGAAAATAAA+AGG | + | chr7_4:59509473-59509492 | None:intergenic | 20.0% |
| !! | ACATGATTAAATATCAATGA+AGG | + | chr7_4:59510125-59510144 | None:intergenic | 20.0% |
| !! | ACTTAATATTGTTTACAACA+GGG | + | chr7_4:59510402-59510421 | None:intergenic | 20.0% |
| !! | AACTTAATATTGTTTACAAC+AGG | + | chr7_4:59510403-59510422 | None:intergenic | 20.0% |
| !! | GTAAACAATATTAAGTTTGT+TGG | - | chr7_4:59510406-59510425 | Msa1167180:intron | 20.0% |
| !!! | TTTTTTTTTTTTGGTGCAAA+TGG | + | chr7_4:59510522-59510541 | None:intergenic | 20.0% |
| !!! | ATTTTTAGATAACACATAAC+CGG | + | chr7_4:59511436-59511455 | None:intergenic | 20.0% |
| !!! | TATATTGATTAGCCAAATAA+TGG | - | chr7_4:59511591-59511610 | Msa1167180:intron | 20.0% |
| !!! | GATATTATTACATGTTTTGT+AGG | + | chr7_4:59511688-59511707 | None:intergenic | 20.0% |
| !!! | TATTCAAATTTTCACTCATT+TGG | - | chr7_4:59512300-59512319 | Msa1167180:intron | 20.0% |
| !! | ATTTGGTATATTATAAATGC+AGG | - | chr7_4:59512317-59512336 | Msa1167180:intron | 20.0% |
| !!! | AAGAATAGTTGAGAATATTT+TGG | - | chr7_4:59512510-59512529 | Msa1167180:intron | 20.0% |
| !!! | TTAAGAACTCTGTTTTATAT+GGG | - | chr7_4:59512632-59512651 | Msa1167180:CDS | 20.0% |
| !! | AAAAAATCAGAAGGAAAATA+AGG | + | chr7_4:59513031-59513050 | None:intergenic | 20.0% |
| !!! | AAAAAGCATCGAAATCTTAA+AGG | + | chr7_4:59507174-59507193 | None:intergenic | 25.0% |
| !! | AATGTGCAATTGGAAATTTT+GGG | - | chr7_4:59507510-59507529 | Msa1167180:intron | 25.0% |
| ! | TGATTAATAGTAACAACATG+GGG | - | chr7_4:59507947-59507966 | Msa1167180:intron | 25.0% |
| !! | ATTAAGTTCCTTGCTATATT+TGG | - | chr7_4:59508142-59508161 | Msa1167180:intron | 25.0% |
| ! | TGTGGTATATTGAATATGTT+AGG | - | chr7_4:59508169-59508188 | Msa1167180:intron | 25.0% |
| ! | ATATTGAATATGTTAGGCAT+TGG | - | chr7_4:59508175-59508194 | Msa1167180:intron | 25.0% |
| !!! | TAATTTTCGAGTATTCTAGT+AGG | - | chr7_4:59508294-59508313 | Msa1167180:intron | 25.0% |
| ! | ATTTATTAATTGGGTATGGA+TGG | - | chr7_4:59508510-59508529 | Msa1167180:intron | 25.0% |
| !!! | AATTTATTCCCTGTTGATTT+TGG | - | chr7_4:59508710-59508729 | Msa1167180:intron | 25.0% |
| !! | TTAATTTGATTGTCACACTT+TGG | + | chr7_4:59509050-59509069 | None:intergenic | 25.0% |
| ! | AATACCAAGTTATATAGTGT+GGG | + | chr7_4:59509136-59509155 | None:intergenic | 25.0% |
| !!! | TGTATTTTTTCTCTTTCATG+GGG | + | chr7_4:59509376-59509395 | None:intergenic | 25.0% |
| !!! | GTGTATTTTTTCTCTTTCAT+GGG | + | chr7_4:59509377-59509396 | None:intergenic | 25.0% |
| !!! | TGTGTATTTTTTCTCTTTCA+TGG | + | chr7_4:59509378-59509397 | None:intergenic | 25.0% |
| ! | GATGAAGTTATTAAATCTCT+TGG | - | chr7_4:59509410-59509429 | Msa1167180:intron | 25.0% |
| ! | AAGTTATTAAATCTCTTGGT+AGG | - | chr7_4:59509414-59509433 | Msa1167180:intron | 25.0% |
| ! | CTATGATGTTCATAGAAAAA+TGG | - | chr7_4:59509481-59509500 | Msa1167180:CDS | 25.0% |
| !! | TGAAAACTGTATTACACTTT+TGG | - | chr7_4:59510302-59510321 | Msa1167180:CDS | 25.0% |
| ! | CACTTTATCTGAATTCAAAA+TGG | + | chr7_4:59510463-59510482 | None:intergenic | 25.0% |
| ! | AGTGCAAACAGAAAATATAT+AGG | - | chr7_4:59510547-59510566 | Msa1167180:intron | 25.0% |
| ! | ACAAGGATAAGAAAGTAATA+AGG | + | chr7_4:59510674-59510693 | None:intergenic | 25.0% |
| !!! | TGTTTTTTAATTCACAATGC+AGG | - | chr7_4:59510941-59510960 | Msa1167180:CDS | 25.0% |
| ! | CTATAAAAACAGCCAAAAAT+GGG | + | chr7_4:59511045-59511064 | None:intergenic | 25.0% |
| ! | TCTATAAAAACAGCCAAAAA+TGG | + | chr7_4:59511046-59511065 | None:intergenic | 25.0% |
| ! | GAAAAAAGACTAATCCAAAT+TGG | + | chr7_4:59511533-59511552 | None:intergenic | 25.0% |
| !!! | TAGTGTTTTAAAAACCAGAA+TGG | + | chr7_4:59511862-59511881 | None:intergenic | 25.0% |
| ! | TACTCTAGATATTTCCATAA+TGG | + | chr7_4:59512049-59512068 | None:intergenic | 25.0% |
| !! | TATTTTTCATTCCAAACTCT+AGG | - | chr7_4:59512067-59512086 | Msa1167180:intron | 25.0% |
| ! | AGTTCTTAAGTTTAAACCTT+GGG | + | chr7_4:59512621-59512640 | None:intergenic | 25.0% |
| !! | CTTAAGAACTCTGTTTTATA+TGG | - | chr7_4:59512631-59512650 | Msa1167180:CDS | 25.0% |
| ! | ATAAACAAACAATTTCAGGA+GGG | + | chr7_4:59512767-59512786 | None:intergenic | 25.0% |
| ! | AATAAACAAACAATTTCAGG+AGG | + | chr7_4:59512768-59512787 | None:intergenic | 25.0% |
| ! | CAGAATAAACAAACAATTTC+AGG | + | chr7_4:59512771-59512790 | None:intergenic | 25.0% |
| ! | ATATCATGATGAACTTGATT+AGG | + | chr7_4:59512877-59512896 | None:intergenic | 25.0% |
| ! | ATGAAGGTTTAAGGTTATGT+GGG | + | chr7_4:59507227-59507246 | None:intergenic | 30.0% |
| ! | GCTAAAAGTAGAAGCTTTTT+GGG | + | chr7_4:59507253-59507272 | None:intergenic | 30.0% |
| AATCTTCAATTTCCTCATCT+GGG | - | chr7_4:59507276-59507295 | Msa1167180:three_prime_UTR | 30.0% | |
| GTAATTAATGCAGCTTAGTT+TGG | + | chr7_4:59507321-59507340 | None:intergenic | 30.0% | |
| !!! | TCTTTTGTTGTTGTGTGTTT+TGG | - | chr7_4:59507397-59507416 | Msa1167180:CDS | 30.0% |
| !!! | GTGTGTTTTGGTTTTGTTTT+TGG | - | chr7_4:59507409-59507428 | Msa1167180:CDS | 30.0% |
| !!! | TTTGTTTTTGGAGTGTTGTT+TGG | - | chr7_4:59507421-59507440 | Msa1167180:CDS | 30.0% |
| !!! | TTGTTTTTGGAGTGTTGTTT+GGG | - | chr7_4:59507422-59507441 | Msa1167180:CDS | 30.0% |
| ! | GAATGTGCAATTGGAAATTT+TGG | - | chr7_4:59507509-59507528 | Msa1167180:intron | 30.0% |
| ! | ATGTGCAATTGGAAATTTTG+GGG | - | chr7_4:59507511-59507530 | Msa1167180:intron | 30.0% |
| TATCCTAATGTGAATCAGAA+AGG | - | chr7_4:59507572-59507591 | Msa1167180:intron | 30.0% | |
| !!! | GGAGGTGAGTTTTTTTTTAT+TGG | - | chr7_4:59507674-59507693 | Msa1167180:intron | 30.0% |
| TAAAACTCTTGATGCATGTT+TGG | - | chr7_4:59507702-59507721 | Msa1167180:intron | 30.0% | |
| CAAATTGAGATTACAGAATC+AGG | + | chr7_4:59507765-59507784 | None:intergenic | 30.0% | |
| ! | TTTTGCTAAAGTGAAACTCA+CGG | + | chr7_4:59507850-59507869 | None:intergenic | 30.0% |
| GATTAATAGTAACAACATGG+GGG | - | chr7_4:59507948-59507967 | Msa1167180:intron | 30.0% | |
| !!! | TTGTTTTTACTTGCATGACA+TGG | - | chr7_4:59508079-59508098 | Msa1167180:intron | 30.0% |
| TTGCATGACATGGAATTTAT+AGG | - | chr7_4:59508089-59508108 | Msa1167180:intron | 30.0% | |
| TGACATGGAATTTATAGGAA+AGG | - | chr7_4:59508094-59508113 | Msa1167180:intron | 30.0% | |
| TAGCAAGGAACTTAATATAG+TGG | + | chr7_4:59508138-59508157 | None:intergenic | 30.0% | |
| ! | AAACATATGTGACATCGTTT+TGG | + | chr7_4:59508325-59508344 | None:intergenic | 30.0% |
| AAAACGATGTCACATATGTT+TGG | - | chr7_4:59508324-59508343 | Msa1167180:intron | 30.0% | |
| ! | TTTTGGCAAAAGCTATACTT+TGG | + | chr7_4:59508402-59508421 | None:intergenic | 30.0% |
| TACTTATGATATCGACGAAT+AGG | - | chr7_4:59508646-59508665 | Msa1167180:intron | 30.0% | |
| TGGTTCACATAAATCTTGAT+TGG | - | chr7_4:59508952-59508971 | Msa1167180:CDS | 30.0% | |
| TTATCCCACACTATATAACT+TGG | - | chr7_4:59509129-59509148 | Msa1167180:intron | 30.0% | |
| CAATACCAAGTTATATAGTG+TGG | + | chr7_4:59509137-59509156 | None:intergenic | 30.0% | |
| CTTTATTGAAATCTTGCTCA+GGG | + | chr7_4:59509232-59509251 | None:intergenic | 30.0% | |
| CTGAGCAAGATTTCAATAAA+GGG | - | chr7_4:59509231-59509250 | Msa1167180:intron | 30.0% | |
| ! | GATTTCAATAAAGGGTATGA+TGG | - | chr7_4:59509239-59509258 | Msa1167180:intron | 30.0% |
| AAAATACACAGAAGAATGCT+CGG | - | chr7_4:59509388-59509407 | Msa1167180:intron | 30.0% | |
| AAGGCAAGTTAATTAAGTAG+AGG | + | chr7_4:59509454-59509473 | None:intergenic | 30.0% | |
| AAAGTAAATGACACAGAAGA+GGG | + | chr7_4:59509554-59509573 | None:intergenic | 30.0% | |
| AAGAAGATAAAAGACTGTGT+TGG | - | chr7_4:59509589-59509608 | Msa1167180:intron | 30.0% | |
| AGAAGATAAAAGACTGTGTT+GGG | - | chr7_4:59509590-59509609 | Msa1167180:intron | 30.0% | |
| ACAATCATGAAACAACAGAA+TGG | + | chr7_4:59509724-59509743 | None:intergenic | 30.0% | |
| ! | TTCCAACTTTGATTTCAGAT+TGG | - | chr7_4:59509752-59509771 | Msa1167180:intron | 30.0% |
| ! | CTGTTGTTTATAACAAGAGT+AGG | + | chr7_4:59509809-59509828 | None:intergenic | 30.0% |
| AAAAAGAAGGGGAAAGAAAA+AGG | + | chr7_4:59510083-59510102 | None:intergenic | 30.0% | |
| !!! | GTTGGTTTTCTAAAAAGAAG+GGG | + | chr7_4:59510094-59510113 | None:intergenic | 30.0% |
| !!! | GGTTGGTTTTCTAAAAAGAA+GGG | + | chr7_4:59510095-59510114 | None:intergenic | 30.0% |
| !!! | AGGTTGGTTTTCTAAAAAGA+AGG | + | chr7_4:59510096-59510115 | None:intergenic | 30.0% |
| !! | CTGATTTTTATTTGCAGACA+TGG | - | chr7_4:59510164-59510183 | Msa1167180:intron | 30.0% |
| ATCTAATATTACTGCATGCA+GGG | - | chr7_4:59510236-59510255 | Msa1167180:intron | 30.0% | |
| !! | AATATTAAGTTTGTTGGCGA+TGG | - | chr7_4:59510412-59510431 | Msa1167180:intron | 30.0% |
| ! | ATAGAATCTAGAATGGAGAA+CGG | + | chr7_4:59510488-59510507 | None:intergenic | 30.0% |
| ! | AGCTTTTCAACTACCAAAAT+CGG | - | chr7_4:59510586-59510605 | Msa1167180:intron | 30.0% |
| AGAATGAGAGAAATCAAAAG+TGG | + | chr7_4:59510650-59510669 | None:intergenic | 30.0% | |
| TTGAATTTCTTAACAGCTTC+AGG | - | chr7_4:59510747-59510766 | Msa1167180:intron | 30.0% | |
| !! | ACATTATTTCTGTTACTGAG+TGG | - | chr7_4:59510872-59510891 | Msa1167180:CDS | 30.0% |
| TGATGAATGCAAAGAAAAGT+CGG | - | chr7_4:59511212-59511231 | Msa1167180:CDS | 30.0% | |
| !! | GTATTTTTGCATTTGCATTG+TGG | + | chr7_4:59511249-59511268 | None:intergenic | 30.0% |
| TGCAAATGCAAAAATACCTT+TGG | - | chr7_4:59511252-59511271 | Msa1167180:CDS | 30.0% | |
| GCAAATGCAAAAATACCTTT+GGG | - | chr7_4:59511253-59511272 | Msa1167180:CDS | 30.0% | |
| GAATATTTGCAACTTGTCAT+TGG | + | chr7_4:59511618-59511637 | None:intergenic | 30.0% | |
| GATACTAATTCATGGTTCAA+TGG | + | chr7_4:59511823-59511842 | None:intergenic | 30.0% | |
| TTAAAAACCAGAATGGTCAT+TGG | + | chr7_4:59511855-59511874 | None:intergenic | 30.0% | |
| AAGAAAATAGACCTAGAGTT+TGG | + | chr7_4:59512081-59512100 | None:intergenic | 30.0% | |
| TATCTGTGTACAATCTCTTA+AGG | - | chr7_4:59512151-59512170 | Msa1167180:intron | 30.0% | |
| ! | ATTTTACAAGTACAGAATCC+AGG | - | chr7_4:59512415-59512434 | Msa1167180:intron | 30.0% |
| GAGTTCTTAAGTTTAAACCT+TGG | + | chr7_4:59512622-59512641 | None:intergenic | 30.0% | |
| TTATTCTGTGCAGAGATATA+TGG | - | chr7_4:59512783-59512802 | Msa1167180:CDS | 30.0% | |
| ! | ATAAGAGGTTGATTATCCAA+GGG | + | chr7_4:59512844-59512863 | None:intergenic | 30.0% |
| ! | AATAAGAGGTTGATTATCCA+AGG | + | chr7_4:59512845-59512864 | None:intergenic | 30.0% |
| TTAGGATTAGGAACAATAAG+AGG | + | chr7_4:59512859-59512878 | None:intergenic | 30.0% | |
| TGATGAACTTGATTAGGATT+AGG | + | chr7_4:59512871-59512890 | None:intergenic | 30.0% | |
| !! | GTCTTGTTAATCTTTTTCTG+AGG | - | chr7_4:59512904-59512923 | Msa1167180:five_prime_UTR | 30.0% |
| ACATTGTTGAGATTTACAAG+AGG | + | chr7_4:59512994-59513013 | None:intergenic | 30.0% | |
| TCTTGTAAATCTCAACAATG+TGG | - | chr7_4:59512993-59513012 | Msa1167180:five_prime_UTR | 30.0% | |
| ACGTCAAAGAAAAAATCAGA+AGG | + | chr7_4:59513040-59513059 | None:intergenic | 30.0% | |
| ! | GATGAAGGTTTAAGGTTATG+TGG | + | chr7_4:59507228-59507247 | None:intergenic | 35.0% |
| ! | TTTGGGATGATGAAGGTTTA+AGG | + | chr7_4:59507236-59507255 | None:intergenic | 35.0% |
| ! | GGCTAAAAGTAGAAGCTTTT+TGG | + | chr7_4:59507254-59507273 | None:intergenic | 35.0% |
| GATGAGGAAATTGAAGATTG+AGG | + | chr7_4:59507275-59507294 | None:intergenic | 35.0% | |
| CAATCTTCAATTTCCTCATC+TGG | - | chr7_4:59507275-59507294 | Msa1167180:three_prime_UTR | 35.0% | |
| AGTTTGGATGAAGAAAAGGA+AGG | + | chr7_4:59507305-59507324 | None:intergenic | 35.0% | |
| ! | GCTTAGTTTGGATGAAGAAA+AGG | + | chr7_4:59507309-59507328 | None:intergenic | 35.0% |
| !! | TTGTTTGGGAAGGTTTTTAG+TGG | - | chr7_4:59507436-59507455 | Msa1167180:CDS | 35.0% |
| ACTTCTCCAAAATCGTTGAA+GGG | - | chr7_4:59507479-59507498 | Msa1167180:intron | 35.0% | |
| ! | TAACTACCCTTCAACGATTT+TGG | + | chr7_4:59507488-59507507 | None:intergenic | 35.0% |
| GGTAGTTATGAATGTGCAAT+TGG | - | chr7_4:59507500-59507519 | Msa1167180:intron | 35.0% | |
| CATCCTTTCTGATTCACATT+AGG | + | chr7_4:59507578-59507597 | None:intergenic | 35.0% | |
| GTTTGGATTTAGTGCATGTT+AGG | - | chr7_4:59507719-59507738 | Msa1167180:intron | 35.0% | |
| ! | TAATGCATGTGCGATTTTTG+AGG | - | chr7_4:59508056-59508075 | Msa1167180:intron | 35.0% |
| CACACAATCCAAATATAGCA+AGG | + | chr7_4:59508153-59508172 | None:intergenic | 35.0% | |
| ! | CTTGCTATATTTGGATTGTG+TGG | - | chr7_4:59508151-59508170 | Msa1167180:intron | 35.0% |
| ! | GTCACATATGTTTGGAATCA+CGG | - | chr7_4:59508332-59508351 | Msa1167180:intron | 35.0% |
| TTGGAGCTTCAACAAAATCA+TGG | + | chr7_4:59508383-59508402 | None:intergenic | 35.0% | |
| ! | TATAGCTTTTGCCAAAAGCA+CGG | - | chr7_4:59508405-59508424 | Msa1167180:intron | 35.0% |
| AAACTGATTACACGCATGTT+TGG | + | chr7_4:59508466-59508485 | None:intergenic | 35.0% | |
| TATTAATTGGGTATGGATGG+TGG | - | chr7_4:59508513-59508532 | Msa1167180:intron | 35.0% | |
| ATTAATTGGGTATGGATGGT+GGG | - | chr7_4:59508514-59508533 | Msa1167180:intron | 35.0% | |
| TATTCCATCTCTAGACTGTA+TGG | - | chr7_4:59508618-59508637 | Msa1167180:intron | 35.0% | |
| ! | AGATTGCTACTTCACTTTGA+AGG | - | chr7_4:59508734-59508753 | Msa1167180:intron | 35.0% |
| AGAAGAAAGACTAATCACGA+TGG | - | chr7_4:59508809-59508828 | Msa1167180:intron | 35.0% | |
| TTTACAACATTCCCTTCTTC+AGG | + | chr7_4:59508840-59508859 | None:intergenic | 35.0% | |
| ACAGGGTTGAGTATGAATTA+TGG | - | chr7_4:59509000-59509019 | Msa1167180:CDS | 35.0% | |
| AAGTCTCAGTGTATAAACCA+CGG | - | chr7_4:59509188-59509207 | Msa1167180:intron | 35.0% | |
| CCTTTATTGAAATCTTGCTC+AGG | + | chr7_4:59509233-59509252 | None:intergenic | 35.0% | |
| CCTGAGCAAGATTTCAATAA+AGG | - | chr7_4:59509230-59509249 | Msa1167180:intron | 35.0% | |
| ! | TTTAAAGTGGCGAATGAAAG+TGG | - | chr7_4:59509302-59509321 | Msa1167180:intron | 35.0% |
| AAGTAAATGACACAGAAGAG+GGG | + | chr7_4:59509553-59509572 | None:intergenic | 35.0% | |
| CAAAGTAAATGACACAGAAG+AGG | + | chr7_4:59509555-59509574 | None:intergenic | 35.0% | |
| !! | TTCTGTGTCATTTACTTTGC+AGG | - | chr7_4:59509556-59509575 | Msa1167180:intron | 35.0% |
| GAAGATAAAAGACTGTGTTG+GGG | - | chr7_4:59509591-59509610 | Msa1167180:intron | 35.0% | |
| ! | TGCCAATCTGAAATCAAAGT+TGG | + | chr7_4:59509757-59509776 | None:intergenic | 35.0% |
| ATAAACAACAGACAGTACAG+AGG | - | chr7_4:59509818-59509837 | Msa1167180:intron | 35.0% | |
| !! | TGAAGTTTTCGACTGCTTTT+AGG | - | chr7_4:59509902-59509921 | Msa1167180:intron | 35.0% |
| ! | TAAGCAAATTGATGGTTCAG+TGG | + | chr7_4:59509981-59510000 | None:intergenic | 35.0% |
| AAGTTAGGAAAATGAAGACC+TGG | + | chr7_4:59510007-59510026 | None:intergenic | 35.0% | |
| ! | AATATCAATGAAGGAAGCAC+AGG | + | chr7_4:59510116-59510135 | None:intergenic | 35.0% |
| AACGAGTGTTTGGAAAACAA+TGG | - | chr7_4:59510192-59510211 | Msa1167180:intron | 35.0% | |
| CATCTAATATTACTGCATGC+AGG | - | chr7_4:59510235-59510254 | Msa1167180:intron | 35.0% | |
| ATAATGTGCATGACAAGGTT+CGG | + | chr7_4:59510273-59510292 | None:intergenic | 35.0% | |
| TCACAATAATGTGCATGACA+AGG | + | chr7_4:59510278-59510297 | None:intergenic | 35.0% | |
| TAATTATAGGACACTTTCCG+TGG | - | chr7_4:59510361-59510380 | Msa1167180:intron | 35.0% | |
| ATACTCTCTGTGAAGGTAAA+TGG | - | chr7_4:59510437-59510456 | Msa1167180:intron | 35.0% | |
| !! | GATTTTGGTAGTTGAAAAGC+TGG | + | chr7_4:59510587-59510606 | None:intergenic | 35.0% |
| AAGTGGATGAGAAACAAAAG+AGG | + | chr7_4:59510633-59510652 | None:intergenic | 35.0% | |
| ! | TCCTTGTAGTTTTTGCGTTA+AGG | - | chr7_4:59510687-59510706 | Msa1167180:intron | 35.0% |
| TCCTTAACGCAAAAACTACA+AGG | + | chr7_4:59510691-59510710 | None:intergenic | 35.0% | |
| ATTGTTGAATTCGCAGCTTA+AGG | + | chr7_4:59510775-59510794 | None:intergenic | 35.0% | |
| TTAAGCTGCGAATTCAACAA+TGG | - | chr7_4:59510774-59510793 | Msa1167180:intron | 35.0% | |
| AATTCAACAATGGAGGTTGT+TGG | - | chr7_4:59510784-59510803 | Msa1167180:intron | 35.0% | |
| GATGAACAAGATAGCTTACA+TGG | + | chr7_4:59510845-59510864 | None:intergenic | 35.0% | |
| !! | TTATTTCTGTTACTGAGTGG+TGG | - | chr7_4:59510875-59510894 | Msa1167180:CDS | 35.0% |
| ATGCAGGATGACTATAGAAA+AGG | - | chr7_4:59510957-59510976 | Msa1167180:CDS | 35.0% | |
| ! | GTTACATACTCTCCCATTTT+TGG | - | chr7_4:59511030-59511049 | Msa1167180:CDS | 35.0% |
| !!! | CTTTCCACAACATTGGTTTT+AGG | + | chr7_4:59511382-59511401 | None:intergenic | 35.0% |
| GTTTGACAGTTTAAACCAAC+CGG | + | chr7_4:59511414-59511433 | None:intergenic | 35.0% | |
| ! | GTTGGTTTAAACTGTCAAAC+CGG | - | chr7_4:59511414-59511433 | Msa1167180:CDS | 35.0% |
| !!! | TCTTATGACTGGTTTTGTAC+TGG | + | chr7_4:59511509-59511528 | None:intergenic | 35.0% |
| ACCAGTCATAAGAACCAATT+TGG | - | chr7_4:59511516-59511535 | Msa1167180:CDS | 35.0% | |
| ! | TCCAAATTGGTTCTTATGAC+TGG | + | chr7_4:59511520-59511539 | None:intergenic | 35.0% |
| CTTGTCATTGGACCATTATT+TGG | + | chr7_4:59511606-59511625 | None:intergenic | 35.0% | |
| GAATCAACTGATGACTCATA+AGG | - | chr7_4:59511926-59511945 | Msa1167180:intron | 35.0% | |
| ! | ATTTTTCCCTCATGCTACAT+TGG | - | chr7_4:59511964-59511983 | Msa1167180:intron | 35.0% |
| ATACTCTTTGCATGCTTCTA+AGG | - | chr7_4:59512114-59512133 | Msa1167180:intron | 35.0% | |
| CTTCTTCAGTAGTGAGTATT+TGG | - | chr7_4:59512348-59512367 | Msa1167180:intron | 35.0% | |
| TTGGATGATTATCCTTGTGA+TGG | - | chr7_4:59512367-59512386 | Msa1167180:intron | 35.0% | |
| AAATGCATATCCTCCAGAAA+GGG | + | chr7_4:59512399-59512418 | None:intergenic | 35.0% | |
| AAAATGCATATCCTCCAGAA+AGG | + | chr7_4:59512400-59512419 | None:intergenic | 35.0% | |
| AATCCAGGTATGATTATTGC+AGG | - | chr7_4:59512430-59512449 | Msa1167180:intron | 35.0% | |
| TATTCTTCGCTTTCTCAATG+TGG | + | chr7_4:59512497-59512516 | None:intergenic | 35.0% | |
| ! | GAAGCAGCATAAAACTTTTC+AGG | + | chr7_4:59512595-59512614 | None:intergenic | 35.0% |
| !! | CTATTCAACTCAAGAGTGTT+TGG | + | chr7_4:59512673-59512692 | None:intergenic | 35.0% |
| CAGTAAATATGTAATGTCGG+TGG | + | chr7_4:59512744-59512763 | None:intergenic | 35.0% | |
| GGGCAGTAAATATGTAATGT+CGG | + | chr7_4:59512747-59512766 | None:intergenic | 35.0% | |
| TTAAAGCAGAACAAAGATGC+TGG | - | chr7_4:59512945-59512964 | Msa1167180:five_prime_UTR | 35.0% | |
| !! | TGCTGGTTCTTTGTTTCTTT+AGG | - | chr7_4:59512962-59512981 | Msa1167180:five_prime_UTR | 35.0% |
| TGTAAATCTCAACAATGTGG+TGG | - | chr7_4:59512996-59513015 | Msa1167180:five_prime_UTR | 35.0% | |
| GTCCTTTATCACTCCTAATT+TGG | - | chr7_4:59513086-59513105 | Msa1167180:five_prime_UTR | 35.0% | |
| AGCCAAATTAGGAGTGATAA+AGG | + | chr7_4:59513091-59513110 | None:intergenic | 35.0% | |
| !!! | GAAGCTTTTTGGGATGATGA+AGG | + | chr7_4:59507243-59507262 | None:intergenic | 40.0% |
| !!! | TTTTGGAGTGTTGTTTGGGA+AGG | - | chr7_4:59507426-59507445 | Msa1167180:CDS | 40.0% |
| CACTTCTCCAAAATCGTTGA+AGG | - | chr7_4:59507478-59507497 | Msa1167180:intron | 40.0% | |
| ACAAAGGTGGGAAAATTTCC+AGG | + | chr7_4:59507641-59507660 | None:intergenic | 40.0% | |
| CGATCAACAAGAACAAAGGT+GGG | + | chr7_4:59507653-59507672 | None:intergenic | 40.0% | |
| ACGATCAACAAGAACAAAGG+TGG | + | chr7_4:59507654-59507673 | None:intergenic | 40.0% | |
| ACCTTTGTTCTTGTTGATCG+TGG | - | chr7_4:59507653-59507672 | Msa1167180:intron | 40.0% | |
| TCCACGATCAACAAGAACAA+AGG | + | chr7_4:59507657-59507676 | None:intergenic | 40.0% | |
| TTTGTTCTTGTTGATCGTGG+AGG | - | chr7_4:59507656-59507675 | Msa1167180:intron | 40.0% | |
| TGCATGTTAGGATTGAATCG+TGG | - | chr7_4:59507731-59507750 | Msa1167180:intron | 40.0% | |
| !! | GGAGTACAAAGCATTGACTT+TGG | + | chr7_4:59507829-59507848 | None:intergenic | 40.0% |
| ACCTTACCCGACACTTATTT+AGG | - | chr7_4:59508022-59508041 | Msa1167180:intron | 40.0% | |
| CCTTACCCGACACTTATTTA+GGG | - | chr7_4:59508023-59508042 | Msa1167180:intron | 40.0% | |
| CGGTGAGTTTGATGAATTCA+CGG | - | chr7_4:59508352-59508371 | Msa1167180:intron | 40.0% | |
| GAGCTTCAACAAAATCATGG+TGG | + | chr7_4:59508380-59508399 | None:intergenic | 40.0% | |
| ATATCGACGAATAGGTCGTT+AGG | - | chr7_4:59508654-59508673 | Msa1167180:intron | 40.0% | |
| GGAACAGAACAACAAAAGAG+TGG | - | chr7_4:59508675-59508694 | Msa1167180:intron | 40.0% | |
| GCAATCTGCCAAAATCAACA+GGG | + | chr7_4:59508721-59508740 | None:intergenic | 40.0% | |
| AGCAATCTGCCAAAATCAAC+AGG | + | chr7_4:59508722-59508741 | None:intergenic | 40.0% | |
| !! | GATTTGCTGATAAGAGCAGA+AGG | + | chr7_4:59508891-59508910 | None:intergenic | 40.0% |
| TGCTCTTATCAGCAAATCCT+TGG | - | chr7_4:59508893-59508912 | Msa1167180:intron | 40.0% | |
| GCTCTTATCAGCAAATCCTT+GGG | - | chr7_4:59508894-59508913 | Msa1167180:intron | 40.0% | |
| CTCTTATCAGCAAATCCTTG+GGG | - | chr7_4:59508895-59508914 | Msa1167180:intron | 40.0% | |
| TCTTATCAGCAAATCCTTGG+GGG | - | chr7_4:59508896-59508915 | Msa1167180:intron | 40.0% | |
| CATAAATCTTGATTGGCGAG+AGG | - | chr7_4:59508959-59508978 | Msa1167180:CDS | 40.0% | |
| ACAAATAGCAACGACGAATG+TGG | - | chr7_4:59509023-59509042 | Msa1167180:CDS | 40.0% | |
| CAAATAGCAACGACGAATGT+GGG | - | chr7_4:59509024-59509043 | Msa1167180:CDS | 40.0% | |
| AGTCTCAGTGTATAAACCAC+GGG | - | chr7_4:59509189-59509208 | Msa1167180:intron | 40.0% | |
| ! | CCACTTTAAAGAAGCAAGCT+TGG | + | chr7_4:59509292-59509311 | None:intergenic | 40.0% |
| ! | CCAAGCTTGCTTCTTTAAAG+TGG | - | chr7_4:59509289-59509308 | Msa1167180:CDS | 40.0% |
| ! | TTTTCTCTTTCATGGGGCAA+CGG | + | chr7_4:59509370-59509389 | None:intergenic | 40.0% |
| AGTAAATGACACAGAAGAGG+GGG | + | chr7_4:59509552-59509571 | None:intergenic | 40.0% | |
| CAACAGAATGGTCGAATAAG+TGG | + | chr7_4:59509712-59509731 | None:intergenic | 40.0% | |
| CCTGGAGTTAAGCAAATTGA+TGG | + | chr7_4:59509989-59510008 | None:intergenic | 40.0% | |
| ! | CCATCAATTTGCTTAACTCC+AGG | - | chr7_4:59509986-59510005 | Msa1167180:intron | 40.0% |
| CATGGAAACAAACGAGTGTT+TGG | - | chr7_4:59510182-59510201 | Msa1167180:intron | 40.0% | |
| GAGTGTTTGGAAAACAATGG+TGG | - | chr7_4:59510195-59510214 | Msa1167180:intron | 40.0% | |
| TGGAAAACAATGGTGGTTGT+TGG | - | chr7_4:59510202-59510221 | Msa1167180:intron | 40.0% | |
| AAACAATGGTGGTTGTTGGA+AGG | - | chr7_4:59510206-59510225 | Msa1167180:intron | 40.0% | |
| ! | ATTACTGCATGCAGGGTATT+AGG | - | chr7_4:59510243-59510262 | Msa1167180:CDS | 40.0% |
| GATGGATATACTCTCTGTGA+AGG | - | chr7_4:59510430-59510449 | Msa1167180:intron | 40.0% | |
| ! | AACTACCAAAATCGGTGCTT+GGG | - | chr7_4:59510594-59510613 | Msa1167180:intron | 40.0% |
| GTATGTAACCTTCACATGAC+TGG | + | chr7_4:59511019-59511038 | None:intergenic | 40.0% | |
| GATGTGTGTTTGTCATTCAC+TGG | + | chr7_4:59511071-59511090 | None:intergenic | 40.0% | |
| TCAGAGAGAGTTACTTCTCT+TGG | - | chr7_4:59511089-59511108 | Msa1167180:CDS | 40.0% | |
| CTTGGTGAACTAGTGCATAA+TGG | - | chr7_4:59511107-59511126 | Msa1167180:CDS | 40.0% | |
| TATGAGTGCAAGTGCAATAG+CGG | - | chr7_4:59511279-59511298 | Msa1167180:CDS | 40.0% | |
| CGAGAAAATGACACGTGTAT+TGG | - | chr7_4:59511315-59511334 | Msa1167180:CDS | 40.0% | |
| !!! | CACAACATTGGTTTTAGGAG+TGG | + | chr7_4:59511377-59511396 | None:intergenic | 40.0% |
| CACTCCTAAAACCAATGTTG+TGG | - | chr7_4:59511375-59511394 | Msa1167180:CDS | 40.0% | |
| TCGGAGAGGATACTAATTCA+TGG | + | chr7_4:59511831-59511850 | None:intergenic | 40.0% | |
| AACCAGAATGGTCATTGGAT+CGG | + | chr7_4:59511850-59511869 | None:intergenic | 40.0% | |
| ACACTATCCAAACTGTTGTG+TGG | - | chr7_4:59511876-59511895 | Msa1167180:intron | 40.0% | |
| GAAAAGCCAATGTAGCATGA+GGG | + | chr7_4:59511973-59511992 | None:intergenic | 40.0% | |
| !! | CTTTTCTGCTTTTGTAGCGT+CGG | - | chr7_4:59511993-59512012 | Msa1167180:intron | 40.0% |
| !! | TTTTCTGCTTTTGTAGCGTC+GGG | - | chr7_4:59511994-59512013 | Msa1167180:intron | 40.0% |
| !! | TAGCGTCGGGTTTTTCTTTT+TGG | - | chr7_4:59512007-59512026 | Msa1167180:intron | 40.0% |
| !! | TCTTTTTGGAGAAGCTTGTC+AGG | - | chr7_4:59512021-59512040 | Msa1167180:intron | 40.0% |
| AAGCTTGTCAGGTTCCATTA+TGG | - | chr7_4:59512032-59512051 | Msa1167180:intron | 40.0% | |
| AAGCCTGCAATAATCATACC+TGG | + | chr7_4:59512436-59512455 | None:intergenic | 40.0% | |
| ! | TTTATGCTGCTTCATTCCCA+AGG | - | chr7_4:59512602-59512621 | Msa1167180:intron | 40.0% |
| !! | TCAACTCAAGAGTGTTTGGA+TGG | + | chr7_4:59512669-59512688 | None:intergenic | 40.0% |
| CACTGAGATACGTGCAATTA+TGG | - | chr7_4:59512807-59512826 | Msa1167180:CDS | 40.0% | |
| GCAACTTGAGAAGCCAAATT+AGG | + | chr7_4:59513102-59513121 | None:intergenic | 40.0% | |
| AGAAGAGTGATGCGTGAGAA+AGG | + | chr7_4:59507197-59507216 | None:intergenic | 45.0% | |
| !!! | AATTTTGGGGTGCCTCAGTA+TGG | - | chr7_4:59507524-59507543 | Msa1167180:intron | 45.0% |
| ACCAATGTTCCACCATACTG+AGG | + | chr7_4:59507539-59507558 | None:intergenic | 45.0% | |
| ! | CAGTATGGTGGAACATTGGT+TGG | - | chr7_4:59507539-59507558 | Msa1167180:intron | 45.0% |
| !! | CCCTAAATAAGTGTCGGGTA+AGG | + | chr7_4:59508026-59508045 | None:intergenic | 45.0% |
| ACCCGACACTTATTTAGGGA+CGG | - | chr7_4:59508027-59508046 | Msa1167180:intron | 45.0% | |
| TCCGTCCCTAAATAAGTGTC+GGG | + | chr7_4:59508031-59508050 | None:intergenic | 45.0% | |
| CTCCGTCCCTAAATAAGTGT+CGG | + | chr7_4:59508032-59508051 | None:intergenic | 45.0% | |
| GACACTTATTTAGGGACGGA+GGG | - | chr7_4:59508031-59508050 | Msa1167180:intron | 45.0% | |
| ! | GCGATATTTCACCGTGCTTT+TGG | + | chr7_4:59508419-59508438 | None:intergenic | 45.0% |
| AAGGCGTGGAATGCACAAAA+TGG | - | chr7_4:59508753-59508772 | Msa1167180:intron | 45.0% | |
| CTTCTTGATTCTATCCCCCA+AGG | + | chr7_4:59508913-59508932 | None:intergenic | 45.0% | |
| CTTGGGGGATAGAATCAAGA+AGG | - | chr7_4:59508911-59508930 | Msa1167180:intron | 45.0% | |
| ATCAAGAAGGCTCTCTCAGA+TGG | - | chr7_4:59508924-59508943 | Msa1167180:intron | 45.0% | |
| TCAAGAAGGCTCTCTCAGAT+GGG | - | chr7_4:59508925-59508944 | Msa1167180:intron | 45.0% | |
| TCTTCCACATCCTGATGACA+GGG | - | chr7_4:59508983-59509002 | Msa1167180:CDS | 45.0% | |
| TCATACTCAACCCTGTCATC+AGG | + | chr7_4:59508996-59509015 | None:intergenic | 45.0% | |
| AGCTCAGCTACTTGAGAAGA+AGG | - | chr7_4:59509094-59509113 | Msa1167180:intron | 45.0% | |
| GCTCAGCTACTTGAGAAGAA+GGG | - | chr7_4:59509095-59509114 | Msa1167180:intron | 45.0% | |
| CTCAGCTACTTGAGAAGAAG+GGG | - | chr7_4:59509096-59509115 | Msa1167180:intron | 45.0% | |
| TTGAAATCTTGCTCAGGGTC+CGG | + | chr7_4:59509227-59509246 | None:intergenic | 45.0% | |
| CGAATGAAAGTGGAAGACCT+TGG | - | chr7_4:59509312-59509331 | Msa1167180:intron | 45.0% | |
| AAAGTGGAAGACCTTGGCAA+TGG | - | chr7_4:59509318-59509337 | Msa1167180:intron | 45.0% | |
| ACATAATCCCACCATTGCCA+AGG | + | chr7_4:59509332-59509351 | None:intergenic | 45.0% | |
| GTAAATGACACAGAAGAGGG+GGG | + | chr7_4:59509551-59509570 | None:intergenic | 45.0% | |
| ! | GGGTTTTCAACATCAGCAAG+AGG | + | chr7_4:59509619-59509638 | None:intergenic | 45.0% |
| !! | CTTGTTCGGCTTTGAGAACA+GGG | + | chr7_4:59509639-59509658 | None:intergenic | 45.0% |
| !! | TCTTGTTCGGCTTTGAGAAC+AGG | + | chr7_4:59509640-59509659 | None:intergenic | 45.0% |
| ACCAACCTGTGCTTCTTGTT+CGG | + | chr7_4:59509653-59509672 | None:intergenic | 45.0% | |
| ! | ACAGACAGTACAGAGGTATG+AGG | - | chr7_4:59509825-59509844 | Msa1167180:intron | 45.0% |
| AGGTAAGTTGTCAAGACCAG+CGG | - | chr7_4:59509922-59509941 | Msa1167180:intron | 45.0% | |
| GTTCTCAAGGCAATATGTGC+AGG | - | chr7_4:59509944-59509963 | Msa1167180:intron | 45.0% | |
| ! | TTGATGGTTCAGTGGTCTCT+TGG | + | chr7_4:59509973-59509992 | None:intergenic | 45.0% |
| ! | TCAATGAAGGAAGCACAGGT+TGG | + | chr7_4:59510112-59510131 | None:intergenic | 45.0% |
| GGCATACACATACTCTTCCA+CGG | + | chr7_4:59510381-59510400 | None:intergenic | 45.0% | |
| ! | CAACTACCAAAATCGGTGCT+TGG | - | chr7_4:59510593-59510612 | Msa1167180:intron | 45.0% |
| ! | ACTACCAAAATCGGTGCTTG+GGG | - | chr7_4:59510595-59510614 | Msa1167180:intron | 45.0% |
| AGCTGCGAATTCAACAATGG+AGG | - | chr7_4:59510777-59510796 | Msa1167180:intron | 45.0% | |
| AGAGTAAAGCCTTCCACCAT+GGG | + | chr7_4:59510817-59510836 | None:intergenic | 45.0% | |
| TGCATTTGCATTGTGGACAC+TGG | + | chr7_4:59511242-59511261 | None:intergenic | 45.0% | |
| CTTGCACTCATAACTCCCAA+AGG | + | chr7_4:59511271-59511290 | None:intergenic | 45.0% | |
| TCCAAACTGTTGTGTGGACT+TGG | - | chr7_4:59511882-59511901 | Msa1167180:intron | 45.0% | |
| ACCAAGTCCACACAACAGTT+TGG | + | chr7_4:59511886-59511905 | None:intergenic | 45.0% | |
| GGAAAAGCCAATGTAGCATG+AGG | + | chr7_4:59511974-59511993 | None:intergenic | 45.0% | |
| CGACGCTACAAAAGCAGAAA+AGG | + | chr7_4:59511995-59512014 | None:intergenic | 45.0% | |
| AAAGGGTAACGACCATCACA+AGG | + | chr7_4:59512382-59512401 | None:intergenic | 45.0% | |
| TCGCTTTCTCAATGTGGCAT+TGG | + | chr7_4:59512491-59512510 | None:intergenic | 45.0% | |
| TATGGCTCAATACATGCCCT+TGG | - | chr7_4:59512825-59512844 | Msa1167180:CDS | 45.0% | |
| !!! | TTTTTTTTTTTGTTTTTTAA+AGG | + | chr7_4:59512213-59512232 | None:intergenic | 5.0% |
| AAAGGAAGGTGACCCAGATG+AGG | + | chr7_4:59507291-59507310 | None:intergenic | 50.0% | |
| ! | GCCTCAGTATGGTGGAACAT+TGG | - | chr7_4:59507535-59507554 | Msa1167180:intron | 50.0% |
| GCTTCGTTTCATTCCATGCC+TGG | - | chr7_4:59507620-59507639 | Msa1167180:intron | 50.0% | |
| GGTGGGAAAATTTCCAGGCA+TGG | + | chr7_4:59507636-59507655 | None:intergenic | 50.0% | |
| CGACACTTATTTAGGGACGG+AGG | - | chr7_4:59508030-59508049 | Msa1167180:intron | 50.0% | |
| GACGCCATACAGTCTAGAGA+TGG | + | chr7_4:59508625-59508644 | None:intergenic | 50.0% | |
| ! | GCTACTTCACTTTGAAGGCG+TGG | - | chr7_4:59508739-59508758 | Msa1167180:intron | 50.0% |
| GCGTGGAATGCACAAAATGG+TGG | - | chr7_4:59508756-59508775 | Msa1167180:intron | 50.0% | |
| ACGATGGACACTCCTGAAGA+AGG | - | chr7_4:59508825-59508844 | Msa1167180:intron | 50.0% | |
| CGATGGACACTCCTGAAGAA+GGG | - | chr7_4:59508826-59508845 | Msa1167180:intron | 50.0% | |
| CAAGAAGGCTCTCTCAGATG+GGG | - | chr7_4:59508926-59508945 | Msa1167180:intron | 50.0% | |
| CTCTTCCACATCCTGATGAC+AGG | - | chr7_4:59508982-59509001 | Msa1167180:CDS | 50.0% | |
| TCAACCCTGTCATCAGGATG+TGG | + | chr7_4:59508990-59509009 | None:intergenic | 50.0% | |
| CTCAGTGTATAAACCACGGG+CGG | - | chr7_4:59509192-59509211 | Msa1167180:intron | 50.0% | |
| TGGAAGACCTTGGCAATGGT+GGG | - | chr7_4:59509322-59509341 | Msa1167180:intron | 50.0% | |
| !! | GGGGCAACGGATTGAAAAGT+CGG | + | chr7_4:59509357-59509376 | None:intergenic | 50.0% |
| ! | CAAAGCCGAACAAGAAGCAC+AGG | - | chr7_4:59509645-59509664 | Msa1167180:intron | 50.0% |
| CAGATTGGCAAAGAGTCTCG+TGG | - | chr7_4:59509767-59509786 | Msa1167180:intron | 50.0% | |
| CATATTGCCTTGAGAACCGC+TGG | + | chr7_4:59509941-59509960 | None:intergenic | 50.0% | |
| !!! | TTGACCCCAAGCACCGATTT+TGG | + | chr7_4:59510602-59510621 | None:intergenic | 50.0% |
| !! | GGTTGTTGGAAAGCATCCCA+TGG | - | chr7_4:59510798-59510817 | Msa1167180:intron | 50.0% |
| !! | TGTTGGAAAGCATCCCATGG+TGG | - | chr7_4:59510801-59510820 | Msa1167180:intron | 50.0% |
| CAGAGTAAAGCCTTCCACCA+TGG | + | chr7_4:59510818-59510837 | None:intergenic | 50.0% | |
| TTTGCATTGTGGACACTGGC+AGG | + | chr7_4:59511238-59511257 | None:intergenic | 50.0% | |
| TGGCGTGCTTTCCACAACAT+TGG | + | chr7_4:59511389-59511408 | None:intergenic | 50.0% | |
| ! | AATGTTGTGGAAAGCACGCC+AGG | - | chr7_4:59511388-59511407 | Msa1167180:CDS | 50.0% |
| ACAGTTTAAACCAACCGGCC+TGG | + | chr7_4:59511409-59511428 | None:intergenic | 50.0% | |
| TTTGCGAGAAGCTTCTGGTG+GGG | + | chr7_4:59511486-59511505 | None:intergenic | 50.0% | |
| GTTTGCGAGAAGCTTCTGGT+GGG | + | chr7_4:59511487-59511506 | None:intergenic | 50.0% | |
| !! | ACTGGTTTGCGAGAAGCTTC+TGG | + | chr7_4:59511491-59511510 | None:intergenic | 50.0% |
| GAATGGTCATTGGATCGGAG+AGG | + | chr7_4:59511845-59511864 | None:intergenic | 50.0% | |
| CTCCGATCCAATGACCATTC+TGG | - | chr7_4:59511845-59511864 | Msa1167180:intron | 50.0% | |
| GTGATGGTCGTTACCCTTTC+TGG | - | chr7_4:59512383-59512402 | Msa1167180:intron | 50.0% | |
| ATGGTCGTTACCCTTTCTGG+AGG | - | chr7_4:59512386-59512405 | Msa1167180:intron | 50.0% | |
| ! | TGTGATCCTACCTGACTCGA+GGG | + | chr7_4:59512555-59512574 | None:intergenic | 50.0% |
| ! | ATGTGATCCTACCTGACTCG+AGG | + | chr7_4:59512556-59512575 | None:intergenic | 50.0% |
| GTCAGGTAGGATCACATGAG+CGG | - | chr7_4:59512559-59512578 | Msa1167180:intron | 50.0% | |
| ! | TTTGGGGTGCCTCAGTATGG+TGG | - | chr7_4:59507527-59507546 | Msa1167180:intron | 55.0% |
| GTGGAAGACCTTGGCAATGG+TGG | - | chr7_4:59509321-59509340 | Msa1167180:intron | 55.0% | |
| TGACACAGAAGAGGGGGGAA+GGG | + | chr7_4:59509546-59509565 | None:intergenic | 55.0% | |
| ATGACACAGAAGAGGGGGGA+AGG | + | chr7_4:59509547-59509566 | None:intergenic | 55.0% | |
| ! | GCCGAACAAGAAGCACAGGT+TGG | - | chr7_4:59509649-59509668 | Msa1167180:intron | 55.0% |
| GTCAAGACCAGCGGTTCTCA+AGG | - | chr7_4:59509931-59509950 | Msa1167180:intron | 55.0% | |
| !! | GGAAAGCATCCCATGGTGGA+AGG | - | chr7_4:59510805-59510824 | Msa1167180:intron | 55.0% |
| AAAGGTTGCGAGTGTCCGTC+AGG | - | chr7_4:59510975-59510994 | Msa1167180:CDS | 55.0% | |
| AAGGTTGCGAGTGTCCGTCA+GGG | - | chr7_4:59510976-59510995 | Msa1167180:CDS | 55.0% | |
| GACGGAGTCCAGTCATGTGA+AGG | - | chr7_4:59511008-59511027 | Msa1167180:CDS | 55.0% | |
| GGTTTGCGAGAAGCTTCTGG+TGG | + | chr7_4:59511488-59511507 | None:intergenic | 55.0% | |
| ! | TCCTACCTGACTCGAGGGTT+CGG | + | chr7_4:59512550-59512569 | None:intergenic | 55.0% |
| GGCTCTCTCAGATGGGGAGA+TGG | - | chr7_4:59508932-59508951 | Msa1167180:intron | 60.0% | |
| ACAGAAGAGGGGGGAAGGGA+GGG | + | chr7_4:59509542-59509561 | None:intergenic | 60.0% | |
| GAGTGTCCGTCAGGGTTCAG+AGG | - | chr7_4:59510984-59511003 | Msa1167180:CDS | 60.0% | |
| CCGTCACCTCTGAACCCTGA+CGG | + | chr7_4:59510993-59511012 | None:intergenic | 60.0% | |
| CCGTCAGGGTTCAGAGGTGA+CGG | - | chr7_4:59510990-59511009 | Msa1167180:CDS | 60.0% | |
| ! | TTGTGGAAAGCACGCCAGGC+CGG | - | chr7_4:59511392-59511411 | Msa1167180:CDS | 60.0% |
| AGTGTCCGAACCCTCGAGTC+AGG | - | chr7_4:59512542-59512561 | Msa1167180:intron | 60.0% | |
| TCCGAACCCTCGAGTCAGGT+AGG | - | chr7_4:59512546-59512565 | Msa1167180:intron | 60.0% | |
| CACAGAAGAGGGGGGAAGGG+AGG | + | chr7_4:59509543-59509562 | None:intergenic | 65.0% | |
| CCACGGGCGGTACTGTGCTC+CGG | - | chr7_4:59509205-59509224 | Msa1167180:intron | 70.0% | |
| ! | GGAAAGCACGCCAGGCCGGT+TGG | - | chr7_4:59511396-59511415 | Msa1167180:CDS | 70.0% |
| CCGGAGCACAGTACCGCCCG+TGG | + | chr7_4:59509208-59509227 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 59507139 | 59513141 | 59507139 | ID=Msa1167180;Name=Msa1167180 |
| chr7_4 | mRNA | 59507139 | 59513141 | 59507139 | ID=Msa1167180-mRNA-1;Parent=Msa1167180;Name=Msa1167180-mRNA-1;_AED=0.09;_eAED=0.09;_QI=241|0.90|0.91|1|1|1|12|241|637 |
| chr7_4 | exon | 59507139 | 59507484 | 59507139 | ID=Msa1167180-mRNA-1:exon:18523;Parent=Msa1167180-mRNA-1 |
| chr7_4 | exon | 59507844 | 59507941 | 59507844 | ID=Msa1167180-mRNA-1:exon:18522;Parent=Msa1167180-mRNA-1 |
| chr7_4 | exon | 59508944 | 59509072 | 59508944 | ID=Msa1167180-mRNA-1:exon:18521;Parent=Msa1167180-mRNA-1 |
| chr7_4 | exon | 59509251 | 59509317 | 59509251 | ID=Msa1167180-mRNA-1:exon:18520;Parent=Msa1167180-mRNA-1 |
| chr7_4 | exon | 59509435 | 59509517 | 59509435 | ID=Msa1167180-mRNA-1:exon:18519;Parent=Msa1167180-mRNA-1 |
| chr7_4 | exon | 59509829 | 59509910 | 59509829 | ID=Msa1167180-mRNA-1:exon:18518;Parent=Msa1167180-mRNA-1 |
| chr7_4 | exon | 59510023 | 59510099 | 59510023 | ID=Msa1167180-mRNA-1:exon:18517;Parent=Msa1167180-mRNA-1 |
| chr7_4 | exon | 59510237 | 59510356 | 59510237 | ID=Msa1167180-mRNA-1:exon:18516;Parent=Msa1167180-mRNA-1 |
| chr7_4 | exon | 59510441 | 59510510 | 59510441 | ID=Msa1167180-mRNA-1:exon:18515;Parent=Msa1167180-mRNA-1 |
| chr7_4 | exon | 59510614 | 59510702 | 59510614 | ID=Msa1167180-mRNA-1:exon:18514;Parent=Msa1167180-mRNA-1 |
| chr7_4 | exon | 59510849 | 59511544 | 59510849 | ID=Msa1167180-mRNA-1:exon:18513;Parent=Msa1167180-mRNA-1 |
| chr7_4 | exon | 59512603 | 59513141 | 59512603 | ID=Msa1167180-mRNA-1:exon:18512;Parent=Msa1167180-mRNA-1 |
| chr7_4 | five_prime_UTR | 59512901 | 59513141 | 59512901 | ID=Msa1167180-mRNA-1:five_prime_utr;Parent=Msa1167180-mRNA-1 |
| chr7_4 | CDS | 59512603 | 59512900 | 59512603 | ID=Msa1167180-mRNA-1:cds;Parent=Msa1167180-mRNA-1 |
| chr7_4 | CDS | 59510849 | 59511544 | 59510849 | ID=Msa1167180-mRNA-1:cds;Parent=Msa1167180-mRNA-1 |
| chr7_4 | CDS | 59510614 | 59510702 | 59510614 | ID=Msa1167180-mRNA-1:cds;Parent=Msa1167180-mRNA-1 |
| chr7_4 | CDS | 59510441 | 59510510 | 59510441 | ID=Msa1167180-mRNA-1:cds;Parent=Msa1167180-mRNA-1 |
| chr7_4 | CDS | 59510237 | 59510356 | 59510237 | ID=Msa1167180-mRNA-1:cds;Parent=Msa1167180-mRNA-1 |
| chr7_4 | CDS | 59510023 | 59510099 | 59510023 | ID=Msa1167180-mRNA-1:cds;Parent=Msa1167180-mRNA-1 |
| chr7_4 | CDS | 59509829 | 59509910 | 59509829 | ID=Msa1167180-mRNA-1:cds;Parent=Msa1167180-mRNA-1 |
| chr7_4 | CDS | 59509435 | 59509517 | 59509435 | ID=Msa1167180-mRNA-1:cds;Parent=Msa1167180-mRNA-1 |
| chr7_4 | CDS | 59509251 | 59509317 | 59509251 | ID=Msa1167180-mRNA-1:cds;Parent=Msa1167180-mRNA-1 |
| chr7_4 | CDS | 59508944 | 59509072 | 59508944 | ID=Msa1167180-mRNA-1:cds;Parent=Msa1167180-mRNA-1 |
| chr7_4 | CDS | 59507844 | 59507941 | 59507844 | ID=Msa1167180-mRNA-1:cds;Parent=Msa1167180-mRNA-1 |
| chr7_4 | CDS | 59507380 | 59507484 | 59507380 | ID=Msa1167180-mRNA-1:cds;Parent=Msa1167180-mRNA-1 |
| chr7_4 | three_prime_UTR | 59507139 | 59507379 | 59507139 | ID=Msa1167180-mRNA-1:three_prime_utr;Parent=Msa1167180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
