Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129330 | XP_003626432.1 | 92.733 | 344 | 9 | 2 | 1 | 329 | 1 | 343 | 0.0 | 652 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129330 | sp|C6TBN2|AKR1_SOYBN | 66.471 | 340 | 98 | 2 | 4 | 328 | 2 | 340 | 4.56e-163 | 461 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129330 | G7L1V2 | 92.733 | 344 | 9 | 2 | 1 | 329 | 1 | 343 | 0.0 | 652 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005380 | Msa1129330 | 0.817610 | 3.015506e-52 | -8.615850e-47 |
| Msa0011840 | Msa1129330 | 0.824364 | 8.403636e-54 | -8.615850e-47 |
| Msa0030700 | Msa1129330 | 0.804471 | 2.126656e-49 | -8.615850e-47 |
| Msa0046870 | Msa1129330 | 0.953063 | 6.247699e-111 | -8.615850e-47 |
| Msa0060670 | Msa1129330 | 0.823023 | 1.731326e-53 | -8.615850e-47 |
| Msa0077340 | Msa1129330 | 0.808716 | 2.701972e-50 | -8.615850e-47 |
| Msa0078120 | Msa1129330 | 0.804119 | 2.516980e-49 | -8.615850e-47 |
| Msa0099700 | Msa1129330 | 0.840041 | 1.103723e-57 | -8.615850e-47 |
| Msa0105410 | Msa1129330 | 0.830138 | 3.476559e-55 | -8.615850e-47 |
| Msa0612350 | Msa1129330 | 0.822335 | 2.502856e-53 | -8.615850e-47 |
| Msa0626460 | Msa1129330 | 0.819949 | 8.875969e-53 | -8.615850e-47 |
| Msa0640820 | Msa1129330 | 0.835093 | 2.051165e-56 | -8.615850e-47 |
| Msa0646240 | Msa1129330 | 0.816834 | 4.507678e-52 | -8.615850e-47 |
| Msa0653450 | Msa1129330 | 0.828629 | 8.081972e-55 | -8.615850e-47 |
| Msa0664540 | Msa1129330 | 0.829701 | 4.442089e-55 | -8.615850e-47 |
| Msa0674480 | Msa1129330 | 0.806330 | 8.670554e-50 | -8.615850e-47 |
| Msa0682110 | Msa1129330 | 0.809881 | 1.519613e-50 | -8.615850e-47 |
| Msa0682160 | Msa1129330 | 0.806207 | 9.200462e-50 | -8.615850e-47 |
| Msa0687580 | Msa1129330 | 0.806777 | 6.977196e-50 | -8.615850e-47 |
| Msa0695880 | Msa1129330 | 0.805877 | 1.079462e-49 | -8.615850e-47 |
| Msa0702720 | Msa1129330 | 0.833730 | 4.508178e-56 | -8.615850e-47 |
| Msa0733010 | Msa1129330 | 0.808788 | 2.607356e-50 | -8.615850e-47 |
| Msa0734250 | Msa1129330 | 0.803190 | 3.922987e-49 | -8.615850e-47 |
| Msa0748150 | Msa1129330 | 0.811017 | 8.638293e-51 | -8.615850e-47 |
| Msa0752600 | Msa1129330 | 0.854457 | 1.215273e-61 | -8.615850e-47 |
| Msa0795750 | Msa1129330 | 0.806503 | 7.968934e-50 | -8.615850e-47 |
| Msa0813160 | Msa1129330 | 0.807330 | 5.327178e-50 | -8.615850e-47 |
| Msa0833530 | Msa1129330 | 0.826672 | 2.385320e-54 | -8.615850e-47 |
| Msa0148320 | Msa1129330 | 0.836693 | 8.059826e-57 | -8.615850e-47 |
| Msa0187540 | Msa1129330 | 0.980771 | 5.402930e-151 | -8.615850e-47 |
| Msa0217060 | Msa1129330 | 0.826556 | 2.542602e-54 | -8.615850e-47 |
| Msa0226310 | Msa1129330 | 0.814059 | 1.868322e-51 | -8.615850e-47 |
| Msa0235290 | Msa1129330 | 0.805510 | 1.289540e-49 | -8.615850e-47 |
| Msa0374890 | Msa1129330 | 0.803719 | 3.047518e-49 | -8.615850e-47 |
| Msa0389410 | Msa1129330 | 0.814949 | 1.187034e-51 | -8.615850e-47 |
| Msa0470880 | Msa1129330 | 0.802866 | 4.578297e-49 | -8.615850e-47 |
| Msa0481630 | Msa1129330 | 0.987191 | 2.233441e-169 | -8.615850e-47 |
| Msa0993190 | Msa1129330 | 0.803596 | 3.233383e-49 | -8.615850e-47 |
| Msa0999680 | Msa1129330 | 0.804751 | 1.858554e-49 | -8.615850e-47 |
| Msa1012800 | Msa1129330 | 0.826552 | 2.548019e-54 | -8.615850e-47 |
| Msa1026480 | Msa1129330 | 0.824074 | 9.828591e-54 | -8.615850e-47 |
| Msa1092310 | Msa1129330 | 0.812784 | 3.561115e-51 | -8.615850e-47 |
| Msa1106590 | Msa1129330 | 0.834839 | 2.376496e-56 | -8.615850e-47 |
| Msa0256920 | Msa1129330 | 0.828045 | 1.117869e-54 | -8.615850e-47 |
| Msa0282960 | Msa1129330 | 0.804837 | 1.783569e-49 | -8.615850e-47 |
| Msa0304570 | Msa1129330 | 0.841385 | 4.906155e-58 | -8.615850e-47 |
| Msa0304680 | Msa1129330 | 0.838764 | 2.368494e-57 | -8.615850e-47 |
| Msa0334630 | Msa1129330 | 0.810066 | 1.386589e-50 | -8.615850e-47 |
| Msa0345050 | Msa1129330 | 0.802521 | 5.393592e-49 | -8.615850e-47 |
| Msa1111640 | Msa1129330 | 0.807914 | 4.004947e-50 | -8.615850e-47 |
| Msa1129330 | Msa1131270 | 0.802107 | 6.563239e-49 | -8.615850e-47 |
| Msa1129330 | Msa1132470 | 0.810812 | 9.567261e-51 | -8.615850e-47 |
| Msa1129330 | Msa1184690 | 0.801073 | 1.069584e-48 | -8.615850e-47 |
| Msa1129330 | Msa1202800 | 0.820386 | 7.049561e-53 | -8.615850e-47 |
| Msa1129330 | Msa1203440 | 0.801249 | 9.843207e-49 | -8.615850e-47 |
| Msa1129330 | Msa1212830 | 0.841630 | 4.230270e-58 | -8.615850e-47 |
| Msa1129330 | Msa1213040 | 0.810047 | 1.399335e-50 | -8.615850e-47 |
| Msa1129330 | Msa1238600 | 0.854004 | 1.642816e-61 | -8.615850e-47 |
| Msa1129330 | Msa1238660 | 0.852690 | 3.912256e-61 | -8.615850e-47 |
| Msa1129330 | Msa1255210 | 0.822935 | 1.815157e-53 | -8.615850e-47 |
| Msa1129330 | Msa1295650 | 0.822011 | 2.975651e-53 | -8.615850e-47 |
| Msa1129330 | Msa1300100 | 0.802877 | 4.553293e-49 | -8.615850e-47 |
| Msa1129330 | Msa1319560 | 0.849699 | 2.734471e-60 | -8.615850e-47 |
| Msa1129330 | Msa1341840 | 0.850165 | 2.025539e-60 | -8.615850e-47 |
| Msa1129330 | Msa1371550 | 0.802347 | 5.857202e-49 | -8.615850e-47 |
| Msa1129330 | Msa1384700 | 0.821410 | 4.097509e-53 | -8.615850e-47 |
| Msa1129330 | Msa1403710 | 0.808291 | 3.329722e-50 | -8.615850e-47 |
| Msa1129330 | Msa1408390 | 0.801791 | 7.622168e-49 | -8.615850e-47 |
| Msa1129330 | Msa1428900 | 0.808666 | 2.768921e-50 | -8.615850e-47 |
| Msa1129330 | Msa1442920 | 0.800841 | 1.192818e-48 | -8.615850e-47 |
| Msa1129330 | Msa1459360 | 0.809708 | 1.655833e-50 | -8.615850e-47 |
| Msa1129330 | Msa1461370 | 0.848133 | 7.440190e-60 | -8.615850e-47 |
| Msa1129330 | Msa1464880 | 0.803531 | 3.334599e-49 | -8.615850e-47 |
| Msa0544490 | Msa1129330 | 0.820940 | 5.259602e-53 | -8.615850e-47 |
| Msa0567380 | Msa1129330 | 0.803632 | 3.178176e-49 | -8.615850e-47 |
| Msa0575320 | Msa1129330 | 0.814506 | 1.488008e-51 | -8.615850e-47 |
| Msa0586450 | Msa1129330 | 0.810080 | 1.376789e-50 | -8.615850e-47 |
| Msa0842750 | Msa1129330 | 0.840287 | 9.520908e-58 | -8.615850e-47 |
| Msa0855870 | Msa1129330 | 0.808731 | 2.681116e-50 | -8.615850e-47 |
| Msa0869930 | Msa1129330 | 0.835782 | 1.372891e-56 | -8.615850e-47 |
| Msa0881960 | Msa1129330 | 0.832058 | 1.173773e-55 | -8.615850e-47 |
| Msa0928180 | Msa1129330 | 0.814298 | 1.654199e-51 | -8.615850e-47 |
| Msa0930270 | Msa1129330 | 0.806084 | 9.765926e-50 | -8.615850e-47 |
| Msa0960420 | Msa1129330 | 0.831590 | 1.531294e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129330 | MtrunA17_Chr7g0274041 | 92.733 | 344 | 9 | 2 | 1 | 329 | 1 | 343 | 0.0 | 652 |
| Msa1129330 | MtrunA17_Chr7g0274061 | 65.205 | 342 | 99 | 4 | 6 | 328 | 9 | 349 | 7.71e-164 | 460 |
| Msa1129330 | MtrunA17_Chr1g0204651 | 61.062 | 339 | 115 | 3 | 6 | 328 | 3 | 340 | 2.74e-159 | 448 |
| Msa1129330 | MtrunA17_Chr7g0274071 | 64.478 | 335 | 103 | 4 | 8 | 328 | 13 | 345 | 3.40e-159 | 449 |
| Msa1129330 | MtrunA17_Chr7g0222171 | 55.522 | 335 | 126 | 6 | 8 | 326 | 4 | 331 | 6.21e-127 | 366 |
| Msa1129330 | MtrunA17_Chr7g0221791 | 55.522 | 335 | 126 | 7 | 8 | 326 | 4 | 331 | 2.38e-124 | 360 |
| Msa1129330 | MtrunA17_Chr7g0222121 | 50.407 | 369 | 126 | 8 | 8 | 326 | 4 | 365 | 1.10e-116 | 342 |
| Msa1129330 | MtrunA17_Chr7g0274081 | 62.944 | 197 | 55 | 3 | 149 | 328 | 2 | 197 | 2.09e-82 | 248 |
| Msa1129330 | MtrunA17_Chr7g0221781 | 55.039 | 129 | 56 | 2 | 8 | 136 | 4 | 130 | 4.14e-43 | 145 |
| Msa1129330 | MtrunA17_Chr7g0222141 | 69.880 | 83 | 23 | 1 | 154 | 234 | 65 | 147 | 1.99e-34 | 124 |
| Msa1129330 | MtrunA17_Chr7g0274091 | 57.143 | 98 | 41 | 1 | 8 | 104 | 9 | 106 | 6.32e-34 | 120 |
| Msa1129330 | MtrunA17_Chr1g0169691 | 29.801 | 302 | 179 | 9 | 13 | 287 | 6 | 301 | 1.22e-25 | 104 |
| Msa1129330 | MtrunA17_Chr1g0167421 | 28.571 | 329 | 176 | 10 | 12 | 285 | 65 | 389 | 1.00e-23 | 100 |
| Msa1129330 | MtrunA17_Chr3g0095421 | 28.261 | 322 | 187 | 11 | 10 | 297 | 37 | 348 | 1.63e-23 | 99.4 |
| Msa1129330 | MtrunA17_Chr4g0049341 | 27.465 | 284 | 191 | 6 | 12 | 286 | 5 | 282 | 1.78e-23 | 98.6 |
| Msa1129330 | MtrunA17_Chr7g0221771 | 43.689 | 103 | 47 | 3 | 227 | 326 | 11 | 105 | 1.90e-21 | 87.8 |
| Msa1129330 | MtrunA17_Chr8g0380261 | 27.193 | 342 | 181 | 13 | 17 | 297 | 48 | 382 | 1.03e-20 | 92.0 |
| Msa1129330 | MtrunA17_Chr7g0221801 | 55.882 | 68 | 30 | 0 | 8 | 75 | 4 | 71 | 1.79e-20 | 84.3 |
| Msa1129330 | MtrunA17_Chr3g0127491 | 24.308 | 325 | 200 | 13 | 10 | 301 | 38 | 349 | 2.55e-19 | 87.4 |
| Msa1129330 | MtrunA17_Chr7g0222151 | 52.239 | 67 | 31 | 1 | 227 | 293 | 11 | 76 | 2.34e-18 | 78.2 |
| Msa1129330 | MtrunA17_Chr4g0036051 | 26.619 | 278 | 159 | 6 | 46 | 297 | 29 | 287 | 5.09e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1129330 | AT1G60750.1 | 58.589 | 326 | 131 | 3 | 1 | 326 | 1 | 322 | 3.34e-137 | 392 |
| Msa1129330 | AT1G60690.1 | 57.988 | 338 | 122 | 5 | 5 | 326 | 4 | 337 | 3.13e-135 | 388 |
| Msa1129330 | AT1G60710.1 | 58.507 | 335 | 119 | 5 | 8 | 326 | 7 | 337 | 2.76e-132 | 380 |
| Msa1129330 | AT1G60680.1 | 56.250 | 336 | 128 | 4 | 7 | 326 | 6 | 338 | 4.47e-131 | 377 |
| Msa1129330 | AT1G60730.1 | 55.821 | 335 | 128 | 5 | 8 | 326 | 7 | 337 | 5.88e-129 | 372 |
| Msa1129330 | AT1G60730.3 | 52.676 | 355 | 128 | 6 | 8 | 326 | 7 | 357 | 3.88e-124 | 360 |
| Msa1129330 | AT1G10810.1 | 54.925 | 335 | 131 | 5 | 8 | 326 | 7 | 337 | 8.00e-124 | 359 |
| Msa1129330 | AT1G60680.2 | 64.192 | 229 | 80 | 1 | 7 | 233 | 6 | 234 | 1.04e-100 | 296 |
| Msa1129330 | AT1G10810.3 | 55.597 | 268 | 99 | 5 | 75 | 326 | 22 | 285 | 7.59e-98 | 291 |
| Msa1129330 | AT1G10810.2 | 62.281 | 228 | 83 | 2 | 8 | 233 | 7 | 233 | 4.97e-96 | 285 |
| Msa1129330 | AT1G60730.2 | 55.714 | 140 | 61 | 1 | 8 | 147 | 7 | 145 | 3.58e-47 | 157 |
| Msa1129330 | AT1G06690.1 | 28.261 | 322 | 187 | 11 | 10 | 297 | 48 | 359 | 2.66e-25 | 105 |
| Msa1129330 | AT4G33670.1 | 26.756 | 299 | 200 | 7 | 13 | 298 | 9 | 301 | 3.33e-25 | 103 |
| Msa1129330 | AT1G04690.1 | 28.477 | 302 | 183 | 9 | 13 | 287 | 6 | 301 | 2.28e-24 | 101 |
| Msa1129330 | AT5G53580.1 | 26.074 | 326 | 193 | 14 | 10 | 301 | 39 | 350 | 4.65e-21 | 92.8 |
| Msa1129330 | AT1G04420.1 | 27.964 | 329 | 178 | 12 | 12 | 285 | 60 | 384 | 1.10e-20 | 92.4 |
| Msa1129330 | AT2G21250.1 | 26.882 | 279 | 159 | 6 | 46 | 298 | 29 | 288 | 4.91e-15 | 75.1 |
Find 95 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATAAAACCGATTGTTAT+TGG | 0.219658 | 7_3:-81327547 | Msa1129330:three_prime_UTR |
| TAAGTTTGGGATTGTCAAAA+TGG | 0.230952 | 7_3:-81331644 | Msa1129330:CDS |
| ATTCAGATTGCCACTAAGTT+TGG | 0.254419 | 7_3:-81331658 | Msa1129330:CDS |
| CAGATATTGTTCCCCTTTGC+AGG | 0.291842 | 7_3:-81331243 | Msa1129330:intron |
| TTTGAGACTCAAACTAGTTC+TGG | 0.313286 | 7_3:-81327603 | Msa1129330:three_prime_UTR |
| CAACATGATCGAACGTATTC+AGG | 0.315662 | 7_3:+81331592 | None:intergenic |
| CACATTAATTATAAGTAAAC+TGG | 0.315738 | 7_3:+81327452 | None:intergenic |
| AAAGATATGGCAACATCTTC+TGG | 0.320111 | 7_3:+81331916 | None:intergenic |
| GTACTAATATATTCCTTGTT+TGG | 0.328996 | 7_3:-81327419 | Msa1129330:three_prime_UTR |
| AGGGTAGTCTTCAACGTCTT+GGG | 0.329622 | 7_3:-81331567 | Msa1129330:CDS |
| TCTGGTAACGTTGTAGTAAA+TGG | 0.332352 | 7_3:-81331619 | Msa1129330:CDS |
| TCCCCTGACACCTCAGATAT+TGG | 0.333520 | 7_3:+81327716 | None:intergenic |
| CAGGTTTCTAAGCTTGGATA+TGG | 0.339873 | 7_3:-81331976 | Msa1129330:CDS |
| CTGCAAAGGGGAACAATATC+TGG | 0.344620 | 7_3:+81331244 | None:intergenic |
| TCCAAATGGAATGGTCTCTT+TGG | 0.345011 | 7_3:-81331282 | Msa1129330:CDS |
| TGCACATACCAATGAAGTTT+TGG | 0.361334 | 7_3:-81331836 | Msa1129330:CDS |
| ATGACACCGCCCCAAGAGTT+AGG | 0.361826 | 7_3:-81332280 | Msa1129330:five_prime_UTR |
| CTTTCCGACCAAAACTTCAT+TGG | 0.365610 | 7_3:+81331828 | None:intergenic |
| TACTTGCAGGTTTCTAAGCT+TGG | 0.367379 | 7_3:-81331982 | Msa1129330:intron |
| TTCAGATTGCCACTAAGTTT+GGG | 0.369267 | 7_3:-81331657 | Msa1129330:CDS |
| TTTGACAATCCCAAACTTAG+TGG | 0.372113 | 7_3:+81331648 | None:intergenic |
| GCAATCTGAATTTGATCTCT+TGG | 0.378904 | 7_3:+81331670 | None:intergenic |
| GGGATTGTCAAAATGGAATC+TGG | 0.379653 | 7_3:-81331637 | Msa1129330:CDS |
| AGCATGTTTGATCAAAGATA+TGG | 0.406589 | 7_3:+81331903 | None:intergenic |
| TCCATTTGGACAGCAGTAAT+GGG | 0.412943 | 7_3:+81331295 | None:intergenic |
| ATCAAAGAAAGTGATTCCTT+TGG | 0.413751 | 7_3:+81331876 | None:intergenic |
| GGTAGGTGAACCTAACTCTT+GGG | 0.426563 | 7_3:+81332270 | None:intergenic |
| TCCAAAGAGACCATTCCATT+TGG | 0.433487 | 7_3:+81331281 | None:intergenic |
| ACTCAACAAAGATGATTTGA+AGG | 0.433839 | 7_3:-81327756 | Msa1129330:CDS |
| TTCCATTTGGACAGCAGTAA+TGG | 0.433941 | 7_3:+81331294 | None:intergenic |
| CTTAAGAAGTTGGTTGAAGA+GGG | 0.435310 | 7_3:-81331385 | Msa1129330:CDS |
| TCCCATTACTGCTGTCCAAA+TGG | 0.437772 | 7_3:-81331296 | Msa1129330:CDS |
| GATGGGAGAGCTTAAGAAGT+TGG | 0.438930 | 7_3:-81331395 | Msa1129330:CDS |
| CGATTGTTATTGGTCAAATA+CGG | 0.439268 | 7_3:-81327537 | Msa1129330:three_prime_UTR |
| CTTCACAACTTGCTCTTGCA+TGG | 0.444626 | 7_3:-81328072 | Msa1129330:CDS |
| GCTTAAGAAGTTGGTTGAAG+AGG | 0.453021 | 7_3:-81331386 | Msa1129330:CDS |
| GAGGGTAGTCTTCAACGTCT+TGG | 0.455629 | 7_3:-81331568 | Msa1129330:CDS |
| ATCAGTTAGGTACCTGCAAA+GGG | 0.462136 | 7_3:+81331231 | None:intergenic |
| CCTTACAGTCCCCTTGGCCG+TGG | 0.464143 | 7_3:-81328502 | Msa1129330:CDS |
| ATCAAACATGCTTTCTCCAA+AGG | 0.464584 | 7_3:-81331892 | Msa1129330:CDS |
| TTATCATCGGATGGAAAAGT+TGG | 0.465236 | 7_3:-81328119 | Msa1129330:CDS |
| TATGGATGCATGGGCCTCAC+TGG | 0.467969 | 7_3:-81331958 | Msa1129330:CDS |
| GTGTCAGGGGATCGGACAAC+TGG | 0.468035 | 7_3:-81327704 | Msa1129330:CDS |
| CGTATTTGACCAATAACAAT+CGG | 0.468386 | 7_3:+81327538 | None:intergenic |
| GTGCCAATATCTGAGGTGTC+AGG | 0.468582 | 7_3:-81327719 | Msa1129330:CDS |
| CTTCAAGAATGTATTGATAG+TGG | 0.472424 | 7_3:+81332242 | None:intergenic |
| GACAACTCTTACAGGGAACT+TGG | 0.479074 | 7_3:-81328538 | Msa1129330:intron |
| CATATTCCTCGGGTGAAGCT+TGG | 0.479903 | 7_3:-81332093 | Msa1129330:CDS |
| ATACTACTATTCATATTCCT+CGG | 0.483116 | 7_3:-81332104 | Msa1129330:CDS |
| CGTTTCTTACTTCTAAGCCT+TGG | 0.483161 | 7_3:+81332067 | None:intergenic |
| TTACTCACAGTGTCCTCAAT+GGG | 0.500470 | 7_3:+81331496 | None:intergenic |
| TACTACTATTCATATTCCTC+GGG | 0.501777 | 7_3:-81332103 | Msa1129330:CDS |
| GGAAAGTTACTCACCAGGGA+TGG | 0.508635 | 7_3:+81328021 | None:intergenic |
| TGGTAGGTGAACCTAACTCT+TGG | 0.508694 | 7_3:+81332269 | None:intergenic |
| CCACGGCCAAGGGGACTGTA+AGG | 0.509324 | 7_3:+81328502 | None:intergenic |
| GACGATGTAGTGCCCATCCC+TGG | 0.510769 | 7_3:-81328034 | Msa1129330:intron |
| ATTACTCACAGTGTCCTCAA+TGG | 0.516227 | 7_3:+81331495 | None:intergenic |
| GAGGGAAAGATTAAGTACAT+AGG | 0.518621 | 7_3:-81331367 | Msa1129330:CDS |
| GAAAATGGTAGTAGTGGGAT+TGG | 0.522692 | 7_3:-81332311 | Msa1129330:five_prime_UTR |
| TCTTACAGGGAACTTGGCAT+TGG | 0.523565 | 7_3:-81328532 | Msa1129330:intron |
| AATGGTAGTAGTGGGATTGG+TGG | 0.533176 | 7_3:-81332308 | Msa1129330:five_prime_UTR |
| TGGGAACAGTGGTGTCAATA+CGG | 0.535040 | 7_3:+81331515 | None:intergenic |
| AATCAGTTAGGTACCTGCAA+AGG | 0.537749 | 7_3:+81331230 | None:intergenic |
| TGCCAATATCTGAGGTGTCA+GGG | 0.538436 | 7_3:-81327718 | Msa1129330:CDS |
| TGACACCACTGTTCCCATTG+AGG | 0.539838 | 7_3:-81331509 | Msa1129330:CDS |
| AAGCTTGGATATGGATGCAT+GGG | 0.540210 | 7_3:-81331967 | Msa1129330:CDS |
| CTTGCATGGATTCTTCATCA+AGG | 0.547230 | 7_3:-81328058 | Msa1129330:CDS |
| CGGGTGAAGCTTGGAAGCCA+AGG | 0.550725 | 7_3:-81332084 | Msa1129330:CDS |
| AAAAGGAAAATGGTAGTAGT+GGG | 0.561756 | 7_3:-81332316 | None:intergenic |
| TAAGCTTGGATATGGATGCA+TGG | 0.565954 | 7_3:-81331968 | Msa1129330:CDS |
| AATGTATTGATAGTGGCAGC+TGG | 0.575541 | 7_3:+81332249 | None:intergenic |
| TATCTGAGGTGTCAGGGGAT+CGG | 0.577450 | 7_3:-81327712 | Msa1129330:CDS |
| TCGGATGGAAAAGTTGGCAC+AGG | 0.579387 | 7_3:-81328113 | Msa1129330:CDS |
| ATAGTGCCTTACAGTCCCCT+TGG | 0.580787 | 7_3:-81328508 | Msa1129330:CDS |
| GCCAATATCTGAGGTGTCAG+GGG | 0.582430 | 7_3:-81327717 | Msa1129330:CDS |
| CTATCAATACATTCTTGAAG+AGG | 0.585291 | 7_3:-81332239 | Msa1129330:five_prime_UTR |
| GAAAGTTACTCACCAGGGAT+GGG | 0.588008 | 7_3:+81328022 | None:intergenic |
| TTCGCAGCTCTCTCCAAACA+AGG | 0.592827 | 7_3:+81327406 | None:intergenic |
| TACGTTCGATCATGTTGTGA+GGG | 0.601109 | 7_3:-81331586 | Msa1129330:CDS |
| TTACTGCTGTCCAAATGGAA+TGG | 0.605560 | 7_3:-81331291 | Msa1129330:CDS |
| CTAGTACTGATACAATCAGA+AGG | 0.606846 | 7_3:-81331333 | Msa1129330:CDS |
| GTAGGTGAACCTAACTCTTG+GGG | 0.611758 | 7_3:+81332271 | None:intergenic |
| TTAATCACATAAACATAACA+TGG | 0.615428 | 7_3:+81327476 | None:intergenic |
| GGGTAGTCTTCAACGTCTTG+GGG | 0.616325 | 7_3:-81331566 | Msa1129330:CDS |
| TGGCTTCCAAGCTTCACCCG+AGG | 0.642698 | 7_3:+81332087 | None:intergenic |
| TAAGTACATAGGATTATCTG+AGG | 0.653859 | 7_3:-81331356 | Msa1129330:CDS |
| AGTGTCCTCAATGGGAACAG+TGG | 0.665325 | 7_3:+81331504 | None:intergenic |
| AAGTTGGCACAGGAGAAGCA+TGG | 0.666692 | 7_3:-81328103 | Msa1129330:CDS |
| TATTGATAGTGGCAGCTGGT+AGG | 0.669189 | 7_3:+81332253 | None:intergenic |
| ATACGTTCGATCATGTTGTG+AGG | 0.673151 | 7_3:-81331587 | Msa1129330:CDS |
| TAGTACTGATACAATCAGAA+GGG | 0.683169 | 7_3:-81331332 | Msa1129330:CDS |
| GGTGAACCTAACTCTTGGGG+CGG | 0.697254 | 7_3:+81332274 | None:intergenic |
| AGATGCTGTGCCAATATCTG+AGG | 0.705973 | 7_3:-81327726 | Msa1129330:CDS |
| TCAGTTAGGTACCTGCAAAG+GGG | 0.723528 | 7_3:+81331232 | None:intergenic |
| CAGCGTTGTATACTCCAGTG+AGG | 0.755691 | 7_3:+81331944 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAACATTTTAAAAATTCTC+AGG | - | chr7_3:81327987-81328006 | Msa1129330:intron | 15.0% |
| !!! | TGTAATTTTTGCAAAAATTA+AGG | + | chr7_3:81328575-81328594 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTATCAAGCA+AGG | - | chr7_3:81328768-81328787 | Msa1129330:intron | 15.0% |
| !!! | AATTTATTTCTCTCTTTTTT+GGG | + | chr7_3:81330479-81330498 | None:intergenic | 15.0% |
| !! | TTAAAGTAAAACAAACATTA+AGG | - | chr7_3:81330792-81330811 | Msa1129330:intron | 15.0% |
| !! | TAAAGTAAAACAAACATTAA+GGG | - | chr7_3:81330793-81330812 | Msa1129330:intron | 15.0% |
| !! | ATTGTTTATATTCAAACATT+TGG | + | chr7_3:81331376-81331395 | None:intergenic | 15.0% |
| !! | ATATTTCAAATAATTTCATC+TGG | + | chr7_3:81331798-81331817 | None:intergenic | 15.0% |
| !! | AAGTTAGAAACACAAAAAAA+TGG | - | chr7_3:81327564-81327583 | Msa1129330:three_prime_UTR | 20.0% |
| !! | AGTTAGAAACACAAAAAAAT+GGG | - | chr7_3:81327565-81327584 | Msa1129330:three_prime_UTR | 20.0% |
| !!! | ATCTATTCTTGAAATTTGTT+AGG | - | chr7_3:81328228-81328247 | Msa1129330:intron | 20.0% |
| !! | AAAAAGAAAATCAATCAGTT+AGG | + | chr7_3:81328479-81328498 | None:intergenic | 20.0% |
| !!! | AATTTTTGCAAAAATTAAGG+TGG | + | chr7_3:81328572-81328591 | None:intergenic | 20.0% |
| !!! | GGTATCTTAAATTTTACATT+AGG | - | chr7_3:81328688-81328707 | Msa1129330:intron | 20.0% |
| !! | AAGGAAATTCATTAAAAAAC+AGG | - | chr7_3:81328787-81328806 | Msa1129330:intron | 20.0% |
| !!! | CAATTTATTTCTCTCTTTTT+TGG | + | chr7_3:81330480-81330499 | None:intergenic | 20.0% |
| !! | TCTTTCAATTCCTAATTTAA+TGG | - | chr7_3:81331083-81331102 | Msa1129330:intron | 20.0% |
| !! | ATGTCAAAAACCATTAAATT+AGG | + | chr7_3:81331096-81331115 | None:intergenic | 20.0% |
| !! | AACAAAAGAAATCATAATTG+AGG | + | chr7_3:81331828-81331847 | None:intergenic | 20.0% |
| !! | TTAATCACATAAACATAACA+TGG | + | chr7_3:81332221-81332240 | None:intergenic | 20.0% |
| !! | CACATTAATTATAAGTAAAC+TGG | + | chr7_3:81332245-81332264 | None:intergenic | 20.0% |
| !!! | TAGAGAGAATTTTTTTTGAG+TGG | - | chr7_3:81327527-81327546 | Msa1129330:three_prime_UTR | 25.0% |
| ! | ATACTACTATTCATATTCCT+CGG | - | chr7_3:81327590-81327609 | Msa1129330:three_prime_UTR | 25.0% |
| ! | AAACATTGTCAATAATTCTC+AGG | + | chr7_3:81327687-81327706 | None:intergenic | 25.0% |
| !! | AAAAATTGAGATTTTCGACT+TGG | + | chr7_3:81328646-81328665 | None:intergenic | 25.0% |
| !!! | CAGTTTTTTAAAGATGAGTT+AGG | + | chr7_3:81328714-81328733 | None:intergenic | 25.0% |
| !! | CTAACTCATCTTTAAAAAAC+TGG | - | chr7_3:81328712-81328731 | Msa1129330:intron | 25.0% |
| !! | CTTTAAAAAACTGGCTTATA+AGG | - | chr7_3:81328721-81328740 | Msa1129330:intron | 25.0% |
| ! | AATTCATTAAAAAACAGGAG+AGG | - | chr7_3:81328792-81328811 | Msa1129330:intron | 25.0% |
| !! | TATGGACTAATCTTTGTTAA+AGG | + | chr7_3:81328824-81328843 | None:intergenic | 25.0% |
| !! | TCCATAGAAATTCTAGAAAA+AGG | - | chr7_3:81328838-81328857 | Msa1129330:intron | 25.0% |
| !!! | ATTTTGTGCATTTTTAGCTA+AGG | - | chr7_3:81328942-81328961 | Msa1129330:intron | 25.0% |
| ! | GATTCATAACATAATTTCTG+AGG | + | chr7_3:81329467-81329486 | None:intergenic | 25.0% |
| !!! | AATTTATTTTGAATGGTGCT+TGG | + | chr7_3:81330058-81330077 | None:intergenic | 25.0% |
| !!! | GCTTCTGAATTTATTTTGAA+TGG | + | chr7_3:81330065-81330084 | None:intergenic | 25.0% |
| ! | TTATTCTTCAACATTCAACT+TGG | + | chr7_3:81330199-81330218 | None:intergenic | 25.0% |
| !!! | ACTCTAATACCATGATTTTT+TGG | - | chr7_3:81330427-81330446 | Msa1129330:intron | 25.0% |
| !!! | CTCTAATACCATGATTTTTT+GGG | - | chr7_3:81330428-81330447 | Msa1129330:intron | 25.0% |
| !!! | ATTATTTGGAGTTGATAGAA+TGG | - | chr7_3:81330512-81330531 | Msa1129330:intron | 25.0% |
| !! | TAGTTGACTTTAATTAGTGT+TGG | - | chr7_3:81330538-81330557 | Msa1129330:intron | 25.0% |
| !! | TTAAGATTGTTAGCTTAGTT+AGG | + | chr7_3:81330580-81330599 | None:intergenic | 25.0% |
| ! | TTTCTAAGTTCTGCATAAAA+AGG | + | chr7_3:81330706-81330725 | None:intergenic | 25.0% |
| !! | TATTTTGCGATTTCATAACT+TGG | - | chr7_3:81330737-81330756 | Msa1129330:intron | 25.0% |
| !! | ATTTTGCGATTTCATAACTT+GGG | - | chr7_3:81330738-81330757 | Msa1129330:intron | 25.0% |
| !!! | ATTGTTAGTGGTTTTAGAAA+TGG | - | chr7_3:81330916-81330935 | Msa1129330:intron | 25.0% |
| ! | AAGTAAAACTATTCGATCAA+AGG | + | chr7_3:81331018-81331037 | None:intergenic | 25.0% |
| !!! | ATAGTTTTACTTGCTTGAAT+TGG | - | chr7_3:81331026-81331045 | Msa1129330:intron | 25.0% |
| ! | GTATTCATACTCAAATCAAA+AGG | + | chr7_3:81331054-81331073 | None:intergenic | 25.0% |
| ! | ATTTCGAGAAAGAATTGTAA+AGG | + | chr7_3:81331119-81331138 | None:intergenic | 25.0% |
| ! | AAACATTTATGAGACTGTTT+AGG | + | chr7_3:81331427-81331446 | None:intergenic | 25.0% |
| !! | GTTCATTTGAGTTTATTTAC+TGG | + | chr7_3:81331453-81331472 | None:intergenic | 25.0% |
| !! | AGAACAAGATGTTTTATCAT+CGG | - | chr7_3:81331562-81331581 | Msa1129330:CDS | 25.0% |
| ! | TGAACATTCAGATTATACAA+GGG | + | chr7_3:81331740-81331759 | None:intergenic | 25.0% |
| ! | TTGAACATTCAGATTATACA+AGG | + | chr7_3:81331741-81331760 | None:intergenic | 25.0% |
| ! | TTGTATAATCTGAATGTTCA+AGG | - | chr7_3:81331740-81331759 | Msa1129330:intron | 25.0% |
| !!! | ACAATCGGTTTTATTCATAT+GGG | + | chr7_3:81332144-81332163 | None:intergenic | 25.0% |
| !!! | AACAATCGGTTTTATTCATA+TGG | + | chr7_3:81332145-81332164 | None:intergenic | 25.0% |
| ! | TGAATAAAACCGATTGTTAT+TGG | - | chr7_3:81332147-81332166 | Msa1129330:five_prime_UTR | 25.0% |
| ! | TCAGAAAAATTTGTGTTTCA+TGG | - | chr7_3:81332185-81332204 | Msa1129330:five_prime_UTR | 25.0% |
| ! | GTACTAATATATTCCTTGTT+TGG | - | chr7_3:81332275-81332294 | Msa1129330:five_prime_UTR | 25.0% |
| ! | CTTCAAGAATGTATTGATAG+TGG | + | chr7_3:81327455-81327474 | None:intergenic | 30.0% |
| CTATCAATACATTCTTGAAG+AGG | - | chr7_3:81327455-81327474 | Msa1129330:three_prime_UTR | 30.0% | |
| TACTACTATTCATATTCCTC+GGG | - | chr7_3:81327591-81327610 | Msa1129330:three_prime_UTR | 30.0% | |
| !!! | CAATGTTTTTTGTTACTTGC+AGG | - | chr7_3:81327699-81327718 | Msa1129330:CDS | 30.0% |
| AGCATGTTTGATCAAAGATA+TGG | + | chr7_3:81327794-81327813 | None:intergenic | 30.0% | |
| ATCAAAGAAAGTGATTCCTT+TGG | + | chr7_3:81327821-81327840 | None:intergenic | 30.0% | |
| TAAAAATTCTCAGGCACTAA+AGG | - | chr7_3:81327996-81328015 | Msa1129330:intron | 30.0% | |
| ! | TAAGTTTGGGATTGTCAAAA+TGG | - | chr7_3:81328050-81328069 | Msa1129330:CDS | 30.0% |
| !! | GAAATTTGTTAGGAAGTGAT+AGG | - | chr7_3:81328238-81328257 | Msa1129330:intron | 30.0% |
| !! | TGTTTTGAATGAGTCAAAGA+TGG | - | chr7_3:81328281-81328300 | Msa1129330:intron | 30.0% |
| !! | GTTTTGAATGAGTCAAAGAT+GGG | - | chr7_3:81328282-81328301 | Msa1129330:intron | 30.0% |
| TAAGTACATAGGATTATCTG+AGG | - | chr7_3:81328338-81328357 | Msa1129330:intron | 30.0% | |
| !! | TAGTACTGATACAATCAGAA+GGG | - | chr7_3:81328362-81328381 | Msa1129330:intron | 30.0% |
| ! | TACTTTTGCAGTCATAATCA+TGG | + | chr7_3:81328524-81328543 | None:intergenic | 30.0% |
| ! | TATGACTGCAAAAGTATGTT+TGG | - | chr7_3:81328528-81328547 | Msa1129330:intron | 30.0% |
| CTAATCTTTGTTAAAGGTTC+AGG | + | chr7_3:81328818-81328837 | None:intergenic | 30.0% | |
| !!! | GCCTTTTTCTAGAATTTCTA+TGG | + | chr7_3:81328842-81328861 | None:intergenic | 30.0% |
| TGTGCATTTACAAGTGAAAT+GGG | - | chr7_3:81328997-81329016 | Msa1129330:intron | 30.0% | |
| ATCTCTTATCACAAAACCAA+TGG | - | chr7_3:81329246-81329265 | Msa1129330:intron | 30.0% | |
| ATTAATGCTATATGCTCCAT+TGG | + | chr7_3:81329265-81329284 | None:intergenic | 30.0% | |
| TGCCATAATTCACATCATTT+GGG | + | chr7_3:81329551-81329570 | None:intergenic | 30.0% | |
| ! | TGCATTTATGGACTGATAAA+TGG | + | chr7_3:81330154-81330173 | None:intergenic | 30.0% |
| AACATTCAACTTGGACTATA+GGG | + | chr7_3:81330190-81330209 | None:intergenic | 30.0% | |
| TAACAAAGCCCAAAAAATCA+TGG | + | chr7_3:81330439-81330458 | None:intergenic | 30.0% | |
| GAGAGAAATAAATTGAGAGA+AGG | - | chr7_3:81330485-81330504 | Msa1129330:intron | 30.0% | |
| TTTGTTGGACTTGGATATAA+TGG | + | chr7_3:81330635-81330654 | None:intergenic | 30.0% | |
| AGTTCTGCATAAAAAGGAAA+TGG | + | chr7_3:81330700-81330719 | None:intergenic | 30.0% | |
| AACTGTCTCAACAATTACAA+AGG | + | chr7_3:81330859-81330878 | None:intergenic | 30.0% | |
| ACAATAGTTCCTTGAAACAA+TGG | - | chr7_3:81330886-81330905 | Msa1129330:intron | 30.0% | |
| ATGTAAAAGCCATTGTTTCA+AGG | + | chr7_3:81330898-81330917 | None:intergenic | 30.0% | |
| ! | AATGGCTTTTACATTGTTAG+TGG | - | chr7_3:81330904-81330923 | Msa1129330:intron | 30.0% |
| AGGAATTGAAAGAAAGAACT+TGG | + | chr7_3:81331076-81331095 | None:intergenic | 30.0% | |
| ATTCTTTCTCGAAATGACTT+CGG | - | chr7_3:81331124-81331143 | Msa1129330:intron | 30.0% | |
| ACTGTCATCAGAAACAAATT+GGG | + | chr7_3:81331282-81331301 | None:intergenic | 30.0% | |
| ATAATCTGAATGTTCAAGGA+AGG | - | chr7_3:81331744-81331763 | Msa1129330:intron | 30.0% | |
| TAATCTGAATGTTCAAGGAA+GGG | - | chr7_3:81331745-81331764 | Msa1129330:intron | 30.0% | |
| ACTCAACAAAGATGATTTGA+AGG | - | chr7_3:81331938-81331957 | Msa1129330:CDS | 30.0% | |
| CGTATTTGACCAATAACAAT+CGG | + | chr7_3:81332159-81332178 | None:intergenic | 30.0% | |
| ! | CGATTGTTATTGGTCAAATA+CGG | - | chr7_3:81332157-81332176 | Msa1129330:five_prime_UTR | 30.0% |
| AAGAAACGTTTGTCCTTCAT+TGG | - | chr7_3:81327642-81327661 | Msa1129330:exon | 35.0% | |
| GAAGTGTGAAAATCCAATGA+AGG | + | chr7_3:81327658-81327677 | None:intergenic | 35.0% | |
| AAAGATATGGCAACATCTTC+TGG | + | chr7_3:81327781-81327800 | None:intergenic | 35.0% | |
| ATCAAACATGCTTTCTCCAA+AGG | - | chr7_3:81327802-81327821 | Msa1129330:CDS | 35.0% | |
| ! | TGCACATACCAATGAAGTTT+TGG | - | chr7_3:81327858-81327877 | Msa1129330:intron | 35.0% |
| !! | CATACCAATGAAGTTTTGGT+CGG | - | chr7_3:81327862-81327881 | Msa1129330:intron | 35.0% |
| ATGAAGATGAACTGATGAAG+TGG | + | chr7_3:81327895-81327914 | None:intergenic | 35.0% | |
| GCAATCTGAATTTGATCTCT+TGG | + | chr7_3:81328027-81328046 | None:intergenic | 35.0% | |
| ATTCAGATTGCCACTAAGTT+TGG | - | chr7_3:81328036-81328055 | Msa1129330:CDS | 35.0% | |
| TTCAGATTGCCACTAAGTTT+GGG | - | chr7_3:81328037-81328056 | Msa1129330:CDS | 35.0% | |
| TTTGACAATCCCAAACTTAG+TGG | + | chr7_3:81328049-81328068 | None:intergenic | 35.0% | |
| ! | TCTGGTAACGTTGTAGTAAA+TGG | - | chr7_3:81328075-81328094 | Msa1129330:CDS | 35.0% |
| !! | AGGTAGTCGTGTTTTTGATT+TGG | - | chr7_3:81328258-81328277 | Msa1129330:intron | 35.0% |
| ! | CTTAAGAAGTTGGTTGAAGA+GGG | - | chr7_3:81328309-81328328 | Msa1129330:intron | 35.0% |
| GAGGGAAAGATTAAGTACAT+AGG | - | chr7_3:81328327-81328346 | Msa1129330:intron | 35.0% | |
| !! | CTAGTACTGATACAATCAGA+AGG | - | chr7_3:81328361-81328380 | Msa1129330:intron | 35.0% |
| GATAATCTGCAAGTTAGACA+AGG | + | chr7_3:81328502-81328521 | None:intergenic | 35.0% | |
| !!! | TTTTCGACTTGGTGCATATT+TGG | + | chr7_3:81328635-81328654 | None:intergenic | 35.0% |
| TTATGACTGTTTCAGTTGTG+AGG | - | chr7_3:81328667-81328686 | Msa1129330:intron | 35.0% | |
| AATGCACACATTCTTAGAGA+GGG | + | chr7_3:81328985-81329004 | None:intergenic | 35.0% | |
| AAATGCACACATTCTTAGAG+AGG | + | chr7_3:81328986-81329005 | None:intergenic | 35.0% | |
| GTGTGCATTTACAAGTGAAA+TGG | - | chr7_3:81328996-81329015 | Msa1129330:intron | 35.0% | |
| TGATTCTTTAGTGGTTGTGA+AGG | + | chr7_3:81329092-81329111 | None:intergenic | 35.0% | |
| ! | GATTGAGACTGATTCTTTAG+TGG | + | chr7_3:81329101-81329120 | None:intergenic | 35.0% |
| ATGCTCAAGCTAAGTTTCTA+GGG | + | chr7_3:81329228-81329247 | None:intergenic | 35.0% | |
| AGAACCATCACAGTTTATCT+TGG | - | chr7_3:81329294-81329313 | Msa1129330:intron | 35.0% | |
| ! | TTCAGAATTGCTCAGCTTTT+TGG | + | chr7_3:81329391-81329410 | None:intergenic | 35.0% |
| TACACTCTTGCTTTAGTCAA+GGG | + | chr7_3:81329433-81329452 | None:intergenic | 35.0% | |
| TTTGGGCTATTTGGATTGAA+AGG | + | chr7_3:81329534-81329553 | None:intergenic | 35.0% | |
| TTCACATCATTTGGGCTATT+TGG | + | chr7_3:81329543-81329562 | None:intergenic | 35.0% | |
| AGCCCAAATGATGTGAATTA+TGG | - | chr7_3:81329546-81329565 | Msa1129330:intron | 35.0% | |
| CTGCCATAATTCACATCATT+TGG | + | chr7_3:81329552-81329571 | None:intergenic | 35.0% | |
| CTATGGAAATGGTTAAGTCA+TGG | + | chr7_3:81329667-81329686 | None:intergenic | 35.0% | |
| TCACTACACAACTATGGAAA+TGG | + | chr7_3:81329678-81329697 | None:intergenic | 35.0% | |
| GATGAAAATCTCAGAAAGAG+AGG | + | chr7_3:81329777-81329796 | None:intergenic | 35.0% | |
| !!! | TTTCTGAGATTTTCATCCGT+AGG | - | chr7_3:81329780-81329799 | Msa1129330:intron | 35.0% |
| AATTGGAATGCTTCAGTAGA+TGG | + | chr7_3:81329942-81329961 | None:intergenic | 35.0% | |
| ! | TTTATGGACTGATAAATGGC+TGG | + | chr7_3:81330150-81330169 | None:intergenic | 35.0% |
| ACATTCAACTTGGACTATAG+GGG | + | chr7_3:81330189-81330208 | None:intergenic | 35.0% | |
| CAACATTCAACTTGGACTAT+AGG | + | chr7_3:81330191-81330210 | None:intergenic | 35.0% | |
| ATAACCTCATCTGTTTGGAT+CGG | + | chr7_3:81330242-81330261 | None:intergenic | 35.0% | |
| ATCACATAACCTCATCTGTT+TGG | + | chr7_3:81330247-81330266 | None:intergenic | 35.0% | |
| AACAGATGAGGTTATGTGAT+AGG | - | chr7_3:81330247-81330266 | Msa1129330:intron | 35.0% | |
| GAGGTTATGTGATAGGATTT+AGG | - | chr7_3:81330254-81330273 | Msa1129330:intron | 35.0% | |
| TTCAGACCTTATCCTCTAAA+AGG | - | chr7_3:81330313-81330332 | Msa1129330:intron | 35.0% | |
| TTGGTGTGTGAATAATTTGG+TGG | - | chr7_3:81330387-81330406 | Msa1129330:intron | 35.0% | |
| TGAGAGAAGGATCGATTATT+TGG | - | chr7_3:81330498-81330517 | Msa1129330:intron | 35.0% | |
| ! | AGATTGTTAGCTTAGTTAGG+AGG | + | chr7_3:81330577-81330596 | None:intergenic | 35.0% |
| !! | CTGTTAGAATTTGTTGGACT+TGG | + | chr7_3:81330644-81330663 | None:intergenic | 35.0% |
| AGTCCAACAAATTCTAACAG+AGG | - | chr7_3:81330644-81330663 | Msa1129330:intron | 35.0% | |
| !! | ACACCTTTTGTTTCATGTGA+TGG | - | chr7_3:81330948-81330967 | Msa1129330:intron | 35.0% |
| GACTGTCATCAGAAACAAAT+TGG | + | chr7_3:81331283-81331302 | None:intergenic | 35.0% | |
| TCAAATGAACCAATCCAAAC+AGG | - | chr7_3:81331463-81331482 | Msa1129330:intron | 35.0% | |
| ATAATGAACAAGGACCTGTT+TGG | + | chr7_3:81331480-81331499 | None:intergenic | 35.0% | |
| ATGCTGGTGAATAATGAACA+AGG | + | chr7_3:81331490-81331509 | None:intergenic | 35.0% | |
| ! | CAAGATGTTTTATCATCGGA+TGG | - | chr7_3:81331566-81331585 | Msa1129330:CDS | 35.0% |
| TTATCATCGGATGGAAAAGT+TGG | - | chr7_3:81331575-81331594 | Msa1129330:CDS | 35.0% | |
| ! | GTGCTTTTGTTCAATGTTCA+TGG | - | chr7_3:81332012-81332031 | Msa1129330:intron | 35.0% |
| ! | GCATCAAACTATGCTTTTCT+TGG | + | chr7_3:81332053-81332072 | None:intergenic | 35.0% |
| CAAAAACTGAGGTACAATAC+TGG | + | chr7_3:81332075-81332094 | None:intergenic | 35.0% | |
| AGTTTGAGTCTCAAAAACTG+AGG | + | chr7_3:81332086-81332105 | None:intergenic | 35.0% | |
| ! | TTTGAGACTCAAACTAGTTC+TGG | - | chr7_3:81332091-81332110 | Msa1129330:CDS | 35.0% |
| ! | GAAAATGGTAGTAGTGGGAT+TGG | - | chr7_3:81327383-81327402 | Msa1129330:three_prime_UTR | 40.0% |
| !! | AATGTATTGATAGTGGCAGC+TGG | + | chr7_3:81327448-81327467 | None:intergenic | 40.0% |
| CGTTTCTTACTTCTAAGCCT+TGG | + | chr7_3:81327630-81327649 | None:intergenic | 40.0% | |
| TACTTGCAGGTTTCTAAGCT+TGG | - | chr7_3:81327712-81327731 | Msa1129330:CDS | 40.0% | |
| CAGGTTTCTAAGCTTGGATA+TGG | - | chr7_3:81327718-81327737 | Msa1129330:CDS | 40.0% | |
| TAAGCTTGGATATGGATGCA+TGG | - | chr7_3:81327726-81327745 | Msa1129330:CDS | 40.0% | |
| AAGCTTGGATATGGATGCAT+GGG | - | chr7_3:81327727-81327746 | Msa1129330:CDS | 40.0% | |
| CTTTCCGACCAAAACTTCAT+TGG | + | chr7_3:81327869-81327888 | None:intergenic | 40.0% | |
| !! | CAATGAAGTTTTGGTCGGAA+AGG | - | chr7_3:81327867-81327886 | Msa1129330:intron | 40.0% |
| GGGATTGTCAAAATGGAATC+TGG | - | chr7_3:81328057-81328076 | Msa1129330:CDS | 40.0% | |
| CAACATGATCGAACGTATTC+AGG | + | chr7_3:81328105-81328124 | None:intergenic | 40.0% | |
| ATACGTTCGATCATGTTGTG+AGG | - | chr7_3:81328107-81328126 | Msa1129330:CDS | 40.0% | |
| TACGTTCGATCATGTTGTGA+GGG | - | chr7_3:81328108-81328127 | Msa1129330:CDS | 40.0% | |
| TTACTCACAGTGTCCTCAAT+GGG | + | chr7_3:81328201-81328220 | None:intergenic | 40.0% | |
| ATTACTCACAGTGTCCTCAA+TGG | + | chr7_3:81328202-81328221 | None:intergenic | 40.0% | |
| ! | GCTTAAGAAGTTGGTTGAAG+AGG | - | chr7_3:81328308-81328327 | Msa1129330:intron | 40.0% |
| TCCATTTGGACAGCAGTAAT+GGG | + | chr7_3:81328402-81328421 | None:intergenic | 40.0% | |
| TTCCATTTGGACAGCAGTAA+TGG | + | chr7_3:81328403-81328422 | None:intergenic | 40.0% | |
| TTACTGCTGTCCAAATGGAA+TGG | - | chr7_3:81328403-81328422 | Msa1129330:intron | 40.0% | |
| TCCAAATGGAATGGTCTCTT+TGG | - | chr7_3:81328412-81328431 | Msa1129330:intron | 40.0% | |
| TCCAAAGAGACCATTCCATT+TGG | + | chr7_3:81328416-81328435 | None:intergenic | 40.0% | |
| ATCAGTTAGGTACCTGCAAA+GGG | + | chr7_3:81328466-81328485 | None:intergenic | 40.0% | |
| AATCAGTTAGGTACCTGCAA+AGG | + | chr7_3:81328467-81328486 | None:intergenic | 40.0% | |
| AAGCAAAGACTGCACAAAAG+TGG | - | chr7_3:81328882-81328901 | Msa1129330:intron | 40.0% | |
| AGCAAAGACTGCACAAAAGT+GGG | - | chr7_3:81328883-81328902 | Msa1129330:intron | 40.0% | |
| ATCATGCTGTTGGTATTCCT+TGG | + | chr7_3:81329063-81329082 | None:intergenic | 40.0% | |
| AAGGCTTTCAATCATGCTGT+TGG | + | chr7_3:81329073-81329092 | None:intergenic | 40.0% | |
| AAGAATCAGTCTCAATCCAG+AGG | - | chr7_3:81329104-81329123 | Msa1129330:intron | 40.0% | |
| AGGTTATGCTTCTGCTTTAG+AGG | + | chr7_3:81329188-81329207 | None:intergenic | 40.0% | |
| !!! | GGGGTTTTTTCTCAGAACAT+AGG | + | chr7_3:81329208-81329227 | None:intergenic | 40.0% |
| ! | TGCTCAAGCTAAGTTTCTAG+GGG | + | chr7_3:81329227-81329246 | None:intergenic | 40.0% |
| GATGCTCAAGCTAAGTTTCT+AGG | + | chr7_3:81329229-81329248 | None:intergenic | 40.0% | |
| ! | AACTGTGATGGTTCTGCTAT+TGG | + | chr7_3:81329289-81329308 | None:intergenic | 40.0% |
| TGGACCAAGATAAACTGTGA+TGG | + | chr7_3:81329301-81329320 | None:intergenic | 40.0% | |
| !! | AGAGTATTGCTGAAGTCAAG+TGG | + | chr7_3:81329342-81329361 | None:intergenic | 40.0% |
| !! | TTCACTCTTCTAGCTTTCAG+AGG | - | chr7_3:81329361-81329380 | Msa1129330:intron | 40.0% |
| !! | TCACTCTTCTAGCTTTCAGA+GGG | - | chr7_3:81329362-81329381 | Msa1129330:intron | 40.0% |
| ! | TCTGAAATCTGCCATAACAG+CGG | - | chr7_3:81329405-81329424 | Msa1129330:intron | 40.0% |
| CTACACTCTTGCTTTAGTCA+AGG | + | chr7_3:81329434-81329453 | None:intergenic | 40.0% | |
| CAGTAGTAAACTGAAGAGCA+TGG | + | chr7_3:81329497-81329516 | None:intergenic | 40.0% | |
| AATCTCATCATGGGAGGAAT+AGG | + | chr7_3:81329610-81329629 | None:intergenic | 40.0% | |
| AACTGCCTGAATCTCATCAT+GGG | + | chr7_3:81329619-81329638 | None:intergenic | 40.0% | |
| TAACTGCCTGAATCTCATCA+TGG | + | chr7_3:81329620-81329639 | None:intergenic | 40.0% | |
| TTCCATAGTTGTGTAGTGAC+AGG | - | chr7_3:81329679-81329698 | Msa1129330:intron | 40.0% | |
| GATCCACAATAAGCTTCCTA+CGG | + | chr7_3:81329799-81329818 | None:intergenic | 40.0% | |
| AATACTAGCACCTGCTAAGA+AGG | - | chr7_3:81329890-81329909 | Msa1129330:intron | 40.0% | |
| GCATTCCAATTCAGCTTATC+AGG | - | chr7_3:81329951-81329970 | Msa1129330:intron | 40.0% | |
| TCTCTATTCACAAACTCCTC+AGG | - | chr7_3:81330026-81330045 | Msa1129330:intron | 40.0% | |
| TGAGCATTTGCATGATAGAC+TGG | + | chr7_3:81330096-81330115 | None:intergenic | 40.0% | |
| AGTCTATCATGCAAATGCTC+AGG | - | chr7_3:81330095-81330114 | Msa1129330:intron | 40.0% | |
| GTCTATCATGCAAATGCTCA+GGG | - | chr7_3:81330096-81330115 | Msa1129330:intron | 40.0% | |
| AGATTCCAAAGCTCTGTGAT+GGG | - | chr7_3:81330119-81330138 | Msa1129330:intron | 40.0% | |
| ATGGCAGTACAGTGCATTTA+TGG | + | chr7_3:81330166-81330185 | None:intergenic | 40.0% | |
| TTGGATCGGAATGAAATCTC+TGG | + | chr7_3:81330228-81330247 | None:intergenic | 40.0% | |
| CTGACCATTGTGTAAGAATC+TGG | - | chr7_3:81330277-81330296 | Msa1129330:intron | 40.0% | |
| AGAGCCAGATTCTTACACAA+TGG | + | chr7_3:81330284-81330303 | None:intergenic | 40.0% | |
| ! | AGACCTTATCCTCTAAAAGG+CGG | - | chr7_3:81330316-81330335 | Msa1129330:intron | 40.0% |
| TCCCTCACATTCAACACTAT+TGG | - | chr7_3:81330362-81330381 | Msa1129330:intron | 40.0% | |
| ! | CCCAATAGTGTTGAATGTGA+GGG | + | chr7_3:81330366-81330385 | None:intergenic | 40.0% |
| CCCTCACATTCAACACTATT+GGG | - | chr7_3:81330363-81330382 | Msa1129330:intron | 40.0% | |
| ACATTCAACACTATTGGGCT+TGG | - | chr7_3:81330368-81330387 | Msa1129330:intron | 40.0% | |
| !! | GGCTTGGTGTGTGAATAATT+TGG | - | chr7_3:81330384-81330403 | Msa1129330:intron | 40.0% |
| CGACCTCTGTTAGAATTTGT+TGG | + | chr7_3:81330650-81330669 | None:intergenic | 40.0% | |
| AACAAACATTAAGGGCTGAG+TGG | - | chr7_3:81330801-81330820 | Msa1129330:intron | 40.0% | |
| GCACCATCACATGAAACAAA+AGG | + | chr7_3:81330954-81330973 | None:intergenic | 40.0% | |
| TCGAAATGACTTCGGTTGTT+TGG | - | chr7_3:81331132-81331151 | Msa1129330:intron | 40.0% | |
| ! | TGTTTGGTGACAACTCTTAC+AGG | - | chr7_3:81331148-81331167 | Msa1129330:intron | 40.0% |
| ! | GTTTGGTGACAACTCTTACA+GGG | - | chr7_3:81331149-81331168 | Msa1129330:intron | 40.0% |
| !! | ACAGTTTTCTGGTATGGACT+TGG | - | chr7_3:81331256-81331275 | Msa1129330:CDS | 40.0% |
| ! | ATGAGACTGTTTAGGACTCT+AGG | + | chr7_3:81331419-81331438 | None:intergenic | 40.0% |
| CAATGCAACCAAGGTTACAA+GGG | - | chr7_3:81331526-81331545 | Msa1129330:CDS | 40.0% | |
| AATGCAACCAAGGTTACAAG+GGG | - | chr7_3:81331527-81331546 | Msa1129330:CDS | 40.0% | |
| ! | AAGTTTTCCCCTTGTAACCT+TGG | + | chr7_3:81331537-81331556 | None:intergenic | 40.0% |
| CTTGCATGGATTCTTCATCA+AGG | - | chr7_3:81331636-81331655 | Msa1129330:CDS | 40.0% | |
| AAGTGGAAAGTTACTCACCA+GGG | + | chr7_3:81331680-81331699 | None:intergenic | 40.0% | |
| AAAGTGGAAAGTTACTCACC+AGG | + | chr7_3:81331681-81331700 | None:intergenic | 40.0% | |
| !! | AACTTGTTGAGGTCACAAAG+TGG | + | chr7_3:81331697-81331716 | None:intergenic | 40.0% |
| CTTTGTGACCTCAACAAGTT+AGG | - | chr7_3:81331697-81331716 | Msa1129330:intron | 40.0% | |
| !! | CATAGATGCCTAACTTGTTG+AGG | + | chr7_3:81331708-81331727 | None:intergenic | 40.0% |
| CTCAACAAGTTAGGCATCTA+TGG | - | chr7_3:81331706-81331725 | Msa1129330:intron | 40.0% | |
| TTGTTCCTACAACACATGAC+AGG | + | chr7_3:81331872-81331891 | None:intergenic | 40.0% | |
| ! | AATGGTAGTAGTGGGATTGG+TGG | - | chr7_3:81327386-81327405 | Msa1129330:three_prime_UTR | 45.0% |
| GTAGGTGAACCTAACTCTTG+GGG | + | chr7_3:81327426-81327445 | None:intergenic | 45.0% | |
| GGTAGGTGAACCTAACTCTT+GGG | + | chr7_3:81327427-81327446 | None:intergenic | 45.0% | |
| TGGTAGGTGAACCTAACTCT+TGG | + | chr7_3:81327428-81327447 | None:intergenic | 45.0% | |
| !! | TATTGATAGTGGCAGCTGGT+AGG | + | chr7_3:81327444-81327463 | None:intergenic | 45.0% |
| AGGGTAGTCTTCAACGTCTT+GGG | - | chr7_3:81328127-81328146 | Msa1129330:CDS | 45.0% | |
| ! | TGGGAACAGTGGTGTCAATA+CGG | + | chr7_3:81328182-81328201 | None:intergenic | 45.0% |
| GATGGGAGAGCTTAAGAAGT+TGG | - | chr7_3:81328299-81328318 | Msa1129330:intron | 45.0% | |
| TCCCATTACTGCTGTCCAAA+TGG | - | chr7_3:81328398-81328417 | Msa1129330:intron | 45.0% | |
| CTGCAAAGGGGAACAATATC+TGG | + | chr7_3:81328453-81328472 | None:intergenic | 45.0% | |
| CAGATATTGTTCCCCTTTGC+AGG | - | chr7_3:81328451-81328470 | Msa1129330:intron | 45.0% | |
| TCAGTTAGGTACCTGCAAAG+GGG | + | chr7_3:81328465-81328484 | None:intergenic | 45.0% | |
| AAAGACTGCACAAAAGTGGG+AGG | - | chr7_3:81328886-81328905 | Msa1129330:intron | 45.0% | |
| TATGTTCTCCTCTCAGTGGT+GGG | + | chr7_3:81328917-81328936 | None:intergenic | 45.0% | |
| ATGCTATGTTCTCCTCTCAG+TGG | + | chr7_3:81328921-81328940 | None:intergenic | 45.0% | |
| CTTGGAGAATGCAAGCTAGA+TGG | + | chr7_3:81329045-81329064 | None:intergenic | 45.0% | |
| ! | CATCTAGCTTGCATTCTCCA+AGG | - | chr7_3:81329043-81329062 | Msa1129330:intron | 45.0% |
| ! | AGTGAGCAAGCTTGTTCAAC+AGG | + | chr7_3:81329584-81329603 | None:intergenic | 45.0% |
| TTCCTCCCATGATGAGATTC+AGG | - | chr7_3:81329611-81329630 | Msa1129330:intron | 45.0% | |
| TGAGATTCAGGCAGTTAGAG+AGG | - | chr7_3:81329623-81329642 | Msa1129330:intron | 45.0% | |
| GTCCTGTCACTACACAACTA+TGG | + | chr7_3:81329684-81329703 | None:intergenic | 45.0% | |
| ! | TCCATTGTTGCTTCTGCAAC+AGG | + | chr7_3:81329741-81329760 | None:intergenic | 45.0% |
| CATCCGTAGGAAGCTTATTG+TGG | - | chr7_3:81329793-81329812 | Msa1129330:intron | 45.0% | |
| TCTCCAGACAATGAAAGCTC+TGG | - | chr7_3:81329821-81329840 | Msa1129330:intron | 45.0% | |
| !! | CAGACAATGAAAGCTCTGGA+GGG | - | chr7_3:81329825-81329844 | Msa1129330:intron | 45.0% |
| TTCCACAAGAGCTTATGCCA+AGG | - | chr7_3:81329861-81329880 | Msa1129330:intron | 45.0% | |
| TTCCTTGGCATAAGCTCTTG+TGG | + | chr7_3:81329866-81329885 | None:intergenic | 45.0% | |
| ! | GTGCTAGTATTCAGGTTCCT+TGG | + | chr7_3:81329881-81329900 | None:intergenic | 45.0% |
| CTTAGCAGGTGCTAGTATTC+AGG | + | chr7_3:81329889-81329908 | None:intergenic | 45.0% | |
| TTAGCCTACTCCTTCTTAGC+AGG | + | chr7_3:81329903-81329922 | None:intergenic | 45.0% | |
| CTGGTCCTGATAAGCTGAAT+TGG | + | chr7_3:81329959-81329978 | None:intergenic | 45.0% | |
| CAATTCAGCTTATCAGGACC+AGG | - | chr7_3:81329957-81329976 | Msa1129330:intron | 45.0% | |
| TTATCAGGACCAGGATCAGA+GGG | - | chr7_3:81329966-81329985 | Msa1129330:intron | 45.0% | |
| GAGATTCCAAAGCTCTGTGA+TGG | - | chr7_3:81330118-81330137 | Msa1129330:intron | 45.0% | |
| TCAACTTGGACTATAGGGGA+TGG | + | chr7_3:81330185-81330204 | None:intergenic | 45.0% | |
| CATTCCGATCCAAACAGATG+AGG | - | chr7_3:81330235-81330254 | Msa1129330:intron | 45.0% | |
| ! | GACCTTATCCTCTAAAAGGC+GGG | - | chr7_3:81330317-81330336 | Msa1129330:intron | 45.0% |
| ! | GCCCAATAGTGTTGAATGTG+AGG | + | chr7_3:81330367-81330386 | None:intergenic | 45.0% |
| GACAACTCTTACAGGGAACT+TGG | - | chr7_3:81331156-81331175 | Msa1129330:intron | 45.0% | |
| TCTTACAGGGAACTTGGCAT+TGG | - | chr7_3:81331162-81331181 | Msa1129330:intron | 45.0% | |
| TCCAAAAAATCCACGGCCAA+GGG | + | chr7_3:81331205-81331224 | None:intergenic | 45.0% | |
| CCTTGCCTCCAAAAAATCCA+CGG | + | chr7_3:81331212-81331231 | None:intergenic | 45.0% | |
| ! | TGTACCTGCAGACAGTTTTC+TGG | - | chr7_3:81331245-81331264 | Msa1129330:CDS | 45.0% |
| CATACCAGAAAACTGTCTGC+AGG | + | chr7_3:81331252-81331271 | None:intergenic | 45.0% | |
| !! | CTGCAGACAGTTTTCTGGTA+TGG | - | chr7_3:81331250-81331269 | Msa1129330:CDS | 45.0% |
| GAACAAGGACCTGTTTGGAT+TGG | + | chr7_3:81331475-81331494 | None:intergenic | 45.0% | |
| CCTGGTGAAAAAAGAGATGC+TGG | + | chr7_3:81331506-81331525 | None:intergenic | 45.0% | |
| !!! | CCAGCATCTCTTTTTTCACC+AGG | - | chr7_3:81331503-81331522 | Msa1129330:intron | 45.0% |
| GCAATGCAACCAAGGTTACA+AGG | - | chr7_3:81331525-81331544 | Msa1129330:CDS | 45.0% | |
| ! | CTTCACAACTTGCTCTTGCA+TGG | - | chr7_3:81331622-81331641 | Msa1129330:CDS | 45.0% |
| GAAAGTTACTCACCAGGGAT+GGG | + | chr7_3:81331675-81331694 | None:intergenic | 45.0% | |
| TGCAACCTGTCATGTGTTGT+AGG | - | chr7_3:81331864-81331883 | Msa1129330:CDS | 45.0% | |
| AGATGCTGTGCCAATATCTG+AGG | - | chr7_3:81331968-81331987 | Msa1129330:CDS | 45.0% | |
| ! | TGCCAATATCTGAGGTGTCA+GGG | - | chr7_3:81331976-81331995 | Msa1129330:CDS | 45.0% |
| CATATTCCTCGGGTGAAGCT+TGG | - | chr7_3:81327601-81327620 | Msa1129330:three_prime_UTR | 50.0% | |
| CAGCGTTGTATACTCCAGTG+AGG | + | chr7_3:81327753-81327772 | None:intergenic | 50.0% | |
| GAGGGTAGTCTTCAACGTCT+TGG | - | chr7_3:81328126-81328145 | Msa1129330:CDS | 50.0% | |
| GGGTAGTCTTCAACGTCTTG+GGG | - | chr7_3:81328128-81328147 | Msa1129330:CDS | 50.0% | |
| TGACACCACTGTTCCCATTG+AGG | - | chr7_3:81328185-81328204 | Msa1129330:intron | 50.0% | |
| AGTGTCCTCAATGGGAACAG+TGG | + | chr7_3:81328193-81328212 | None:intergenic | 50.0% | |
| CTATGTTCTCCTCTCAGTGG+TGG | + | chr7_3:81328918-81328937 | None:intergenic | 50.0% | |
| !!! | CAGGGCTGCTGCTTTTTCAA+TGG | - | chr7_3:81329138-81329157 | Msa1129330:intron | 50.0% |
| TTTATCTTGGTCCAGCCAGC+AGG | - | chr7_3:81329307-81329326 | Msa1129330:intron | 50.0% | |
| TGCCTGAATCTCATCATGGG+AGG | + | chr7_3:81329616-81329635 | None:intergenic | 50.0% | |
| GCCTGTTGCAGAAGCAACAA+TGG | - | chr7_3:81329737-81329756 | Msa1129330:intron | 50.0% | |
| CCTCCAGAGCTTTCATTGTC+TGG | + | chr7_3:81329827-81329846 | None:intergenic | 50.0% | |
| ! | CCAGACAATGAAAGCTCTGG+AGG | - | chr7_3:81329824-81329843 | Msa1129330:intron | 50.0% |
| !! | ACAATGAAAGCTCTGGAGGG+TGG | - | chr7_3:81329828-81329847 | Msa1129330:intron | 50.0% |
| AGCACCTGCTAAGAAGGAGT+AGG | - | chr7_3:81329896-81329915 | Msa1129330:intron | 50.0% | |
| CTTATCAGGACCAGGATCAG+AGG | - | chr7_3:81329965-81329984 | Msa1129330:intron | 50.0% | |
| !! | GTCCCGCCTTTTAGAGGATA+AGG | + | chr7_3:81330322-81330341 | None:intergenic | 50.0% |
| ! | ATCGAAGTCCCGCCTTTTAG+AGG | + | chr7_3:81330328-81330347 | None:intergenic | 50.0% |
| ATAGTGCCTTACAGTCCCCT+TGG | - | chr7_3:81331186-81331205 | Msa1129330:intron | 50.0% | |
| CCAAAAAATCCACGGCCAAG+GGG | + | chr7_3:81331204-81331223 | None:intergenic | 50.0% | |
| CTCCAAAAAATCCACGGCCA+AGG | + | chr7_3:81331206-81331225 | None:intergenic | 50.0% | |
| !!! | CTTGGCCGTGGATTTTTTGG+AGG | - | chr7_3:81331204-81331223 | Msa1129330:intron | 50.0% |
| !!! | CCGTGGATTTTTTGGAGGCA+AGG | - | chr7_3:81331209-81331228 | Msa1129330:intron | 50.0% |
| TTCACCAGGCAATGCAACCA+AGG | - | chr7_3:81331517-81331536 | Msa1129330:CDS | 50.0% | |
| GTAACCTTGGTTGCATTGCC+TGG | + | chr7_3:81331524-81331543 | None:intergenic | 50.0% | |
| TCGGATGGAAAAGTTGGCAC+AGG | - | chr7_3:81331581-81331600 | Msa1129330:CDS | 50.0% | |
| AAGTTGGCACAGGAGAAGCA+TGG | - | chr7_3:81331591-81331610 | Msa1129330:CDS | 50.0% | |
| GGAAAGTTACTCACCAGGGA+TGG | + | chr7_3:81331676-81331695 | None:intergenic | 50.0% | |
| ! | GTGCCAATATCTGAGGTGTC+AGG | - | chr7_3:81331975-81331994 | Msa1129330:CDS | 50.0% |
| ! | GCCAATATCTGAGGTGTCAG+GGG | - | chr7_3:81331977-81331996 | Msa1129330:intron | 50.0% |
| TCCCCTGACACCTCAGATAT+TGG | + | chr7_3:81331981-81332000 | None:intergenic | 50.0% | |
| ! | TATCTGAGGTGTCAGGGGAT+CGG | - | chr7_3:81331982-81332001 | Msa1129330:intron | 50.0% |
| TTCGCAGCTCTCTCCAAACA+AGG | + | chr7_3:81332291-81332310 | None:intergenic | 50.0% | |
| ATGACACCGCCCCAAGAGTT+AGG | - | chr7_3:81327414-81327433 | Msa1129330:three_prime_UTR | 55.0% | |
| GGTGAACCTAACTCTTGGGG+CGG | + | chr7_3:81327423-81327442 | None:intergenic | 55.0% | |
| TATGGATGCATGGGCCTCAC+TGG | - | chr7_3:81327736-81327755 | Msa1129330:CDS | 55.0% | |
| TCCAGAGGTTCGCAATGTGC+AGG | - | chr7_3:81329119-81329138 | Msa1129330:intron | 55.0% | |
| CCAGAGGTTCGCAATGTGCA+GGG | - | chr7_3:81329120-81329139 | Msa1129330:intron | 55.0% | |
| !! | AGTCAAGGGCACCGCTGTTA+TGG | + | chr7_3:81329419-81329438 | None:intergenic | 55.0% |
| ATCACTCTGCCCTCTGATCC+TGG | + | chr7_3:81329978-81329997 | None:intergenic | 55.0% | |
| AGCAGCCCATCACAGAGCTT+TGG | + | chr7_3:81330127-81330146 | None:intergenic | 55.0% | |
| !!! | CCCCTTGGCCGTGGATTTTT+TGG | - | chr7_3:81331201-81331220 | Msa1129330:intron | 55.0% |
| TGGCTTCCAAGCTTCACCCG+AGG | + | chr7_3:81327610-81327629 | None:intergenic | 60.0% | |
| CGGGTGAAGCTTGGAAGCCA+AGG | - | chr7_3:81327610-81327629 | Msa1129330:three_prime_UTR | 60.0% | |
| AGGAAGCTCCCACCACTGAG+AGG | - | chr7_3:81328906-81328925 | Msa1129330:intron | 60.0% | |
| CCCTGCACATTGCGAACCTC+TGG | + | chr7_3:81329123-81329142 | None:intergenic | 60.0% | |
| ATCTTGGTCCAGCCAGCAGG+TGG | - | chr7_3:81329310-81329329 | Msa1129330:intron | 60.0% | |
| AAGTGGATGCCTCCACCTGC+TGG | + | chr7_3:81329325-81329344 | None:intergenic | 60.0% | |
| !! | TGGTGCTTGGTGTCTGCCTG+AGG | + | chr7_3:81330045-81330064 | None:intergenic | 60.0% |
| GACGATGTAGTGCCCATCCC+TGG | - | chr7_3:81331660-81331679 | Msa1129330:CDS | 60.0% | |
| GTGTCAGGGGATCGGACAAC+TGG | - | chr7_3:81331990-81332009 | Msa1129330:intron | 60.0% | |
| TTGGTCCAGCCAGCAGGTGG+AGG | - | chr7_3:81329313-81329332 | Msa1129330:intron | 65.0% | |
| CCACGGCCAAGGGGACTGTA+AGG | + | chr7_3:81331195-81331214 | None:intergenic | 65.0% | |
| CCTTACAGTCCCCTTGGCCG+TGG | - | chr7_3:81331192-81331211 | Msa1129330:intron | 65.0% | |
| GGATGCCTCCACCTGCTGGC+TGG | + | chr7_3:81329321-81329340 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 81327382 | 81332334 | 81327382 | ID=Msa1129330;Name=Msa1129330 |
| chr7_3 | mRNA | 81327382 | 81332334 | 81327382 | ID=Msa1129330-mRNA-1;Parent=Msa1129330;Name=Msa1129330-mRNA-1;_AED=0.36;_eAED=0.36;_QI=201|0.83|0.71|1|1|1|7|270|329 |
| chr7_3 | exon | 81327382 | 81327830 | 81327382 | ID=Msa1129330-mRNA-1:exon:23630;Parent=Msa1129330-mRNA-1 |
| chr7_3 | exon | 81328035 | 81328169 | 81328035 | ID=Msa1129330-mRNA-1:exon:23629;Parent=Msa1129330-mRNA-1 |
| chr7_3 | exon | 81328473 | 81328546 | 81328473 | ID=Msa1129330-mRNA-1:exon:23628;Parent=Msa1129330-mRNA-1 |
| chr7_3 | exon | 81331244 | 81331416 | 81331244 | ID=Msa1129330-mRNA-1:exon:23627;Parent=Msa1129330-mRNA-1 |
| chr7_3 | exon | 81331504 | 81331707 | 81331504 | ID=Msa1129330-mRNA-1:exon:23626;Parent=Msa1129330-mRNA-1 |
| chr7_3 | exon | 81331828 | 81331995 | 81331828 | ID=Msa1129330-mRNA-1:exon:23625;Parent=Msa1129330-mRNA-1 |
| chr7_3 | exon | 81332077 | 81332334 | 81332077 | ID=Msa1129330-mRNA-1:exon:23624;Parent=Msa1129330-mRNA-1 |
| chr7_3 | five_prime_UTR | 81332134 | 81332334 | 81332134 | ID=Msa1129330-mRNA-1:five_prime_utr;Parent=Msa1129330-mRNA-1 |
| chr7_3 | CDS | 81332077 | 81332133 | 81332077 | ID=Msa1129330-mRNA-1:cds;Parent=Msa1129330-mRNA-1 |
| chr7_3 | CDS | 81331828 | 81331995 | 81331828 | ID=Msa1129330-mRNA-1:cds;Parent=Msa1129330-mRNA-1 |
| chr7_3 | CDS | 81331504 | 81331707 | 81331504 | ID=Msa1129330-mRNA-1:cds;Parent=Msa1129330-mRNA-1 |
| chr7_3 | CDS | 81331244 | 81331416 | 81331244 | ID=Msa1129330-mRNA-1:cds;Parent=Msa1129330-mRNA-1 |
| chr7_3 | CDS | 81328473 | 81328546 | 81328473 | ID=Msa1129330-mRNA-1:cds;Parent=Msa1129330-mRNA-1 |
| chr7_3 | CDS | 81328035 | 81328169 | 81328035 | ID=Msa1129330-mRNA-1:cds;Parent=Msa1129330-mRNA-1 |
| chr7_3 | CDS | 81327652 | 81327830 | 81327652 | ID=Msa1129330-mRNA-1:cds;Parent=Msa1129330-mRNA-1 |
| chr7_3 | three_prime_UTR | 81327382 | 81327651 | 81327382 | ID=Msa1129330-mRNA-1:three_prime_utr;Parent=Msa1129330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
