AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0304680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0304680 MtrunA17_Chr2g0333021 98.888 809 9 0 1 809 1 809 0.0 1666
Msa0304680 MtrunA17_Chr4g0003411 86.279 809 110 1 1 809 1 808 0.0 1485
Msa0304680 MtrunA17_Chr3g0137791 64.354 836 254 11 5 809 4 826 0.0 1084
Msa0304680 MtrunA17_Chr3g0137821 63.164 828 273 11 5 809 4 822 0.0 1063
Msa0304680 MtrunA17_Chr7g0246481 46.368 826 392 16 4 797 297 1103 0.0 734
Msa0304680 MtrunA17_Chr5g0398161 45.738 833 388 17 4 797 36 843 0.0 731
Msa0304680 MtrunA17_Chr8g0350951 45.933 836 392 17 1 797 224 1038 0.0 731
Msa0304680 MtrunA17_Chr5g0398171 45.134 822 403 17 4 797 36 837 0.0 714
Msa0304680 MtrunA17_Chr5g0406161 46.278 806 368 14 50 809 86 872 0.0 712
Msa0304680 MtrunA17_Chr8g0380631 45.285 859 395 22 4 809 13 849 0.0 698
Msa0304680 MtrunA17_Chr3g0143471 43.643 873 412 19 2 809 9 866 0.0 689
Msa0304680 MtrunA17_Chr2g0330431 44.760 811 384 19 5 809 4 756 0.0 651
Msa0304680 MtrunA17_Chr8g0341931 42.506 814 392 22 5 809 7 753 0.0 605
Msa0304680 MtrunA17_Chr1g0192401 33.054 239 123 9 498 726 733 944 3.74e-23 105
Msa0304680 MtrunA17_Chr1g0192401 28.571 231 120 9 210 427 361 559 4.02e-15 80.1
Msa0304680 MtrunA17_Chr5g0406151 54.167 72 29 1 320 391 12 79 6.64e-23 93.6
Msa0304680 MtrunA17_Chr2g0295411 30.924 249 132 10 457 693 736 956 1.92e-18 90.9
Msa0304680 MtrunA17_Chr2g0295411 26.538 260 135 11 211 449 388 612 6.14e-14 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0304680 AT3G15730.1 80.812 813 149 2 1 809 1 810 0.0 1400
Msa0304680 AT1G52570.1 79.285 811 165 3 1 809 1 810 0.0 1364
Msa0304680 AT1G52570.3 79.285 811 165 3 1 809 1 810 0.0 1364
Msa0304680 AT1G52570.2 79.285 811 165 3 1 809 1 810 0.0 1364
Msa0304680 AT5G25370.1 62.228 826 284 10 3 809 4 820 0.0 1038
Msa0304680 AT5G25370.3 62.228 826 284 10 3 809 4 820 0.0 1038
Msa0304680 AT5G25370.2 62.228 826 284 10 3 809 4 820 0.0 1038
Msa0304680 AT5G25370.4 65.323 744 249 6 72 809 5 745 0.0 1006
Msa0304680 AT2G42010.1 45.742 822 400 16 4 797 269 1072 0.0 738
Msa0304680 AT2G42010.2 44.668 844 402 16 4 797 269 1097 0.0 730
Msa0304680 AT4G00240.1 45.910 819 403 16 4 797 113 916 0.0 726
Msa0304680 AT4G00240.2 47.416 774 373 14 44 797 122 881 0.0 723
Msa0304680 AT4G00240.3 47.416 774 373 14 44 797 5 764 0.0 723
Msa0304680 AT4G11830.2 45.048 828 405 18 5 797 33 845 0.0 713
Msa0304680 AT4G11830.1 46.410 780 377 17 44 797 49 813 0.0 707
Msa0304680 AT4G11840.1 44.565 828 409 17 5 797 43 855 0.0 706
Msa0304680 AT4G11850.1 44.782 824 409 16 5 797 39 847 0.0 704
Msa0304680 AT4G11840.2 44.256 827 383 17 5 797 43 825 0.0 691
Msa0304680 AT4G35790.2 45.330 803 379 18 46 809 76 857 0.0 672
Msa0304680 AT4G35790.1 44.963 814 377 19 46 809 76 868 0.0 667
Msa0304680 AT1G55180.1 40.465 818 408 19 6 809 10 762 0.0 587
Msa0304680 AT1G55180.2 41.505 771 391 17 50 809 19 740 0.0 586
Msa0304680 AT4G35790.3 45.219 617 290 13 46 627 76 679 8.02e-173 515
Msa0304680 AT4G11830.4 44.007 609 304 12 5 590 33 627 2.34e-168 501
Msa0304680 AT4G11830.3 43.740 599 300 12 5 580 33 617 3.20e-164 491
Msa0304680 AT3G05630.1 27.036 614 289 27 208 725 372 922 8.27e-31 130
Msa0304680 AT3G16785.6 34.483 203 99 8 497 693 756 930 9.53e-19 92.0
Msa0304680 AT3G16785.6 30.045 223 105 8 221 427 390 577 5.88e-15 79.7
Msa0304680 AT3G16785.5 34.483 203 99 8 497 693 756 930 9.53e-19 92.0
Msa0304680 AT3G16785.5 30.045 223 105 8 221 427 390 577 5.88e-15 79.7
Msa0304680 AT3G16785.3 34.483 203 99 8 497 693 756 930 9.53e-19 92.0
Msa0304680 AT3G16785.3 28.514 249 123 9 221 449 390 603 5.75e-15 80.1
Msa0304680 AT3G16785.2 34.483 203 99 8 497 693 756 930 9.53e-19 92.0
Msa0304680 AT3G16785.2 28.514 249 123 9 221 449 390 603 5.75e-15 80.1
Msa0304680 AT3G16785.1 34.483 203 99 8 497 693 756 930 9.94e-19 92.0
Msa0304680 AT3G16785.1 28.514 249 123 9 221 449 390 603 5.61e-15 80.1
Msa0304680 AT3G16785.4 34.483 203 99 8 497 693 756 930 1.03e-18 92.0
Msa0304680 AT3G16785.4 28.514 249 123 9 221 449 390 603 5.32e-15 80.1

Find 266 sgRNAs with CRISPR-Local

Find 376 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAATGCATTCTTCACTTTC+TGG 0.019872 2_3:-62042732 None:intergenic
GCCTGAACTGATGCACTTTC+TGG 0.110790 2_3:-62041797 None:intergenic
CCTATTGGGGCAACCTTAAT+TGG 0.143828 2_3:+62040360 Msa0304680:CDS
GAATCAGGTTCTGGTCTTTC+AGG 0.151953 2_3:-62041974 None:intergenic
TACTCATCATCAGAAAATTT+TGG 0.198426 2_3:+62041049 Msa0304680:CDS
ATCTTAAGTGAAAGCTCTTT+TGG 0.217956 2_3:-62041704 None:intergenic
TTGACGGTGGAGCAGCTTTC+GGG 0.225952 2_3:+62041471 Msa0304680:CDS
AACACCACAAATACTATATT+TGG 0.235974 2_3:-62042987 None:intergenic
CCTGGTGCTTCAATAGAAAA+AGG 0.253077 2_3:+62041236 Msa0304680:CDS
GACACCAAGGCTCGTGTTCT+TGG 0.259989 2_3:+62042903 Msa0304680:CDS
ACCTCCTGCAAGTTGTATAT+TGG 0.269725 2_3:-62040649 None:intergenic
ACCTTCTCCGCTATCCCATT+GGG 0.270807 2_3:+62042829 Msa0304680:CDS
TAAGGAACTCCAGGAAATTT+AGG 0.271707 2_3:-62040552 None:intergenic
ATCTTTGAATTTCCATGAAT+TGG 0.275511 2_3:-62040465 None:intergenic
ACCAGATTGCTGACAAATAT+TGG 0.280067 2_3:+62042763 Msa0304680:CDS
TTAGGGTATTAATGCTTGTT+TGG 0.281535 2_3:+62040859 Msa0304680:CDS
ACGAAACTAAGTAGTAAGTA+TGG 0.282199 2_3:-62042949 None:intergenic
AGATAGGTGGGTTGAAATAT+TGG 0.293912 2_3:+62040428 Msa0304680:CDS
ATGTTTCAAAAGACCGCAAC+TGG 0.294096 2_3:+62040511 Msa0304680:CDS
ATTGACGGTGGAGCAGCTTT+CGG 0.298826 2_3:+62041470 Msa0304680:CDS
TAGCACCATCCATTGATCTT+TGG 0.299079 2_3:-62042572 None:intergenic
TGGTGCCAATTTCTATATTC+TGG 0.302016 2_3:-62041022 None:intergenic
CCATGAATCTGACCCCTTGC+AGG 0.320797 2_3:-62042651 None:intergenic
TAATGCATTCTTCACTTTCT+GGG 0.323254 2_3:-62042731 None:intergenic
GTGAAAGATGATAATCCTAT+TGG 0.323636 2_3:+62040345 Msa0304680:CDS
ATCAATGGTTGCATAAAGTT+TGG 0.323808 2_3:-62040205 None:intergenic
CCTCCTGCAAGTTGTATATT+GGG 0.327612 2_3:-62040648 None:intergenic
CCAATTAAGGTTGCCCCAAT+AGG 0.334639 2_3:-62040360 None:intergenic
TTTCATCAGCCTAACTTTCC+TGG 0.335279 2_3:+62041218 Msa0304680:CDS
CCAGCTTTAGCAGCATCTTC+AGG 0.337228 2_3:-62041506 None:intergenic
TTATTTAATCCCACTTCATT+TGG 0.342886 2_3:-62041089 None:intergenic
GTCCCCAATATACAACTTGC+AGG 0.343312 2_3:+62040645 Msa0304680:CDS
AACCCTATCATTTAGCTAAT+AGG 0.346495 2_3:+62042625 Msa0304680:CDS
TGATCATCAGGGAAAGTTAC+TGG 0.348678 2_3:-62041416 None:intergenic
CCCAATATTTGTCAGCAATC+TGG 0.350230 2_3:-62042764 None:intergenic
TAATAAGCTTGAGATGATTA+AGG 0.351704 2_3:+62043074 Msa0304680:three_prime_UTR
TGAAAGATGATAATCCTATT+GGG 0.352247 2_3:+62040346 Msa0304680:CDS
CTGCCTATTAGCTAAATGAT+AGG 0.357619 2_3:-62042628 None:intergenic
TACTGGGGATGGGGTAATAA+TGG 0.358885 2_3:-62041399 None:intergenic
TCACATTTACTGTGCCCATT+TGG 0.361006 2_3:+62040302 Msa0304680:CDS
TTCACCAAATATAGTATTTG+TGG 0.363035 2_3:+62042983 Msa0304680:three_prime_UTR
CATTCCTGTTGAGGAGGTAT+TGG 0.363727 2_3:+62040392 Msa0304680:CDS
CACCTTCTCCGCTATCCCAT+TGG 0.367992 2_3:+62042828 Msa0304680:CDS
CCTGCAAGGGGTCAGATTCA+TGG 0.370010 2_3:+62042651 Msa0304680:CDS
AGGCACTTAATATACATTAC+AGG 0.372424 2_3:+62040729 Msa0304680:CDS
ATTGTCCAGAATATAGAAAT+TGG 0.374763 2_3:+62041017 Msa0304680:CDS
AATGTACGCCCTTCCAATTA+AGG 0.374946 2_3:-62040373 None:intergenic
TAAACTTTGTAGGTAATTGA+TGG 0.377297 2_3:+62038811 Msa0304680:intron
CCTGAACTGATGCACTTTCT+GGG 0.377490 2_3:-62041796 None:intergenic
ATTCCTGTTGAGGAGGTATT+GGG 0.378380 2_3:+62040393 Msa0304680:CDS
TAGGGTATTAATGCTTGTTT+GGG 0.385598 2_3:+62040860 Msa0304680:CDS
CTCTGTCACGCTTCCTTCAC+TGG 0.390332 2_3:-62042856 None:intergenic
CCCAGAAAGTGCATCAGTTC+AGG 0.391340 2_3:+62041796 Msa0304680:CDS
CACACAAAGACAAGGTTGTA+AGG 0.391884 2_3:+62040584 Msa0304680:CDS
GCTAAAGCTGGGCTTATTAG+TGG 0.392386 2_3:+62041518 Msa0304680:CDS
ATTAGAAGTCCTAAATTTCC+TGG 0.394374 2_3:+62040543 Msa0304680:CDS
GTGATGTCTCCTCCTGGCTT+TGG 0.396802 2_3:-62040798 None:intergenic
AGAACACGAGCCTTGGTGTC+AGG 0.406228 2_3:-62042900 None:intergenic
GGCTTGAAGGTCCCATTGCT+TGG 0.410425 2_3:+62041294 Msa0304680:CDS
CAGAAAGTGAAGAATGCATT+AGG 0.410724 2_3:+62042733 Msa0304680:CDS
TTCCACGTCTCTTGATCATC+AGG 0.411607 2_3:-62041428 None:intergenic
TGCAAAGCACCAATGTCTTC+AGG 0.412451 2_3:-62041674 None:intergenic
GTGAATAAAGAACCAATTCA+TGG 0.418317 2_3:+62040453 Msa0304680:CDS
CCAGATTGCTGACAAATATT+GGG 0.419715 2_3:+62042764 Msa0304680:CDS
AGTAGGAGTTTATTTATTCA+AGG 0.420712 2_3:-62038611 None:intergenic
CCTGAAGATGCTGCTAAAGC+TGG 0.422903 2_3:+62041506 Msa0304680:CDS
TCTTCATGCTACAATCTTTG+AGG 0.430433 2_3:+62038856 Msa0304680:CDS
TGTCTTATGCCCTCGCAATC+CGG 0.432330 2_3:+62040980 Msa0304680:CDS
TTACTTACCTATCATCATCT+TGG 0.432761 2_3:-62042047 None:intergenic
TTCGGAAAAGTGAATGAAAC+GGG 0.434688 2_3:-62041169 None:intergenic
GAGATGAAAATGAGAGTAGT+TGG 0.439267 2_3:-62038674 None:intergenic
TTTGAGGAGACAGTTGGATT+CGG 0.439825 2_3:+62040171 Msa0304680:CDS
CTTTGTGTGTAGAAAGCATA+AGG 0.440268 2_3:-62040570 None:intergenic
ATACTGAGATTTCCTTGGTA+AGG 0.443762 2_3:+62040763 Msa0304680:CDS
ATTGAAGCACCAGGAAAGTT+AGG 0.444896 2_3:-62041227 None:intergenic
ATATAATCTGAATCAGGTTC+TGG 0.445716 2_3:-62041983 None:intergenic
ATTGAAAATCAATATTTCCT+TGG 0.448120 2_3:+62041617 Msa0304680:CDS
TTTCCTTGGTAAGGGATTCA+AGG 0.448128 2_3:+62040772 Msa0304680:CDS
GGAAGGATAACATAATAGAT+AGG 0.450815 2_3:+62041540 Msa0304680:CDS
GTTCATGCCAAGATGATGAT+AGG 0.452461 2_3:+62042040 Msa0304680:CDS
ATTGTTAGCAAGATTGAAGC+TGG 0.453049 2_3:+62041725 Msa0304680:CDS
CAAAACTTTGAGGAGACAGT+TGG 0.453252 2_3:+62040165 Msa0304680:CDS
TTAGATAAGACAAAACTTTG+AGG 0.453476 2_3:+62040155 Msa0304680:intron
GATATCCACTCAAGGCTTGA+AGG 0.460473 2_3:+62041281 Msa0304680:CDS
AGCAGCATCTTCAGGAGTCT+CGG 0.461063 2_3:-62041498 None:intergenic
CCACCCAATACCTCCTCAAC+AGG 0.461488 2_3:-62040396 None:intergenic
GCAGCATCTTCAGGAGTCTC+GGG 0.461536 2_3:-62041497 None:intergenic
TCGTGCTTTCTCTAAATCAA+TGG 0.461965 2_3:-62040220 None:intergenic
GGAGTTTATTTATTCAAGGA+TGG 0.463567 2_3:-62038607 None:intergenic
GCTTGAAGGTCCCATTGCTT+GGG 0.466265 2_3:+62041295 Msa0304680:CDS
GGTTAAAGAGTTAAAACTCT+TGG 0.467594 2_3:-62038559 None:intergenic
TGTTTATACTGAGATTTCCT+TGG 0.470042 2_3:+62040758 Msa0304680:CDS
TATTTGACATTCTTCTGCCT+TGG 0.470173 2_3:+62041914 Msa0304680:CDS
CATTGATCTTTGGTTGATGT+TGG 0.471677 2_3:-62042562 None:intergenic
TCCGCCAAGAACACGAGCCT+TGG 0.472706 2_3:-62042907 None:intergenic
GCTCGCATATAATCTGAATC+AGG 0.474750 2_3:-62041989 None:intergenic
AGTTGGTGAATGATGATGAA+TGG 0.475978 2_3:-62038657 None:intergenic
GGATAGCGGAGAAGGTGGCC+AGG 0.478302 2_3:-62042822 None:intergenic
CCCATTGGGGTTTCCAGTGA+AGG 0.480016 2_3:+62042843 Msa0304680:CDS
ATATTGGGGACAAAATTGTC+TGG 0.480142 2_3:-62040633 None:intergenic
CAGGGAAAGTTACTGGGGAT+GGG 0.481757 2_3:-62041409 None:intergenic
TACTGAGATTTCCTTGGTAA+GGG 0.486700 2_3:+62040764 Msa0304680:CDS
GCACTTTCTGGGACACCCTC+AGG 0.486846 2_3:-62041785 None:intergenic
ATATGATATCCGATGCCAAA+TGG 0.487948 2_3:-62040317 None:intergenic
AGCTAATAGGCAGCCTGCAA+GGG 0.491417 2_3:+62042638 Msa0304680:CDS
TATGATATCCGATGCCAAAT+GGG 0.492675 2_3:-62040316 None:intergenic
AGGAGCATGTTAATCCTCAA+TGG 0.492749 2_3:+62040268 Msa0304680:CDS
AGATTATATGCGAGCTCAAG+AGG 0.493595 2_3:+62041997 Msa0304680:CDS
AGGATCTTCCTCAATTCCCT+TGG 0.495088 2_3:-62041885 None:intergenic
AACAAAACATCCCAAGCAAT+GGG 0.497488 2_3:-62041305 None:intergenic
AAAGACCGCAACTGGGCTCT+AGG 0.498162 2_3:+62040519 Msa0304680:CDS
CCCCAATGGGATAGCGGAGA+AGG 0.498169 2_3:-62042830 None:intergenic
GAGACAGTTGGATTCGGAAA+AGG 0.499116 2_3:+62040177 Msa0304680:CDS
TGTTTAACTTTGAGCAGAGA+TGG 0.499268 2_3:+62041324 Msa0304680:CDS
GATCATCAGGGAAAGTTACT+GGG 0.499638 2_3:-62041415 None:intergenic
TCAGGGAAAGTTACTGGGGA+TGG 0.501750 2_3:-62041410 None:intergenic
CTTACCAGCCTCATAGATGT+TGG 0.502263 2_3:+62040676 Msa0304680:CDS
CCAAGTGTGATGTCTCCTCC+TGG 0.503968 2_3:-62040804 None:intergenic
CAGCTATTTAGATCTATTGA+CGG 0.506424 2_3:+62041455 Msa0304680:CDS
TCCTTCACTGGAAACCCCAA+TGG 0.508775 2_3:-62042844 None:intergenic
TAGCTAATAGGCAGCCTGCA+AGG 0.513603 2_3:+62042637 Msa0304680:CDS
TTCACTTTCTGGGTGAAGGA+AGG 0.516269 2_3:-62042721 None:intergenic
AGAGACTCTGAAATTGCAAT+GGG 0.517579 2_3:+62042594 Msa0304680:CDS
AGGGAAAGTTACTGGGGATG+GGG 0.517899 2_3:-62041408 None:intergenic
GATAAACTCAAGAATATTAG+TGG 0.518555 2_3:+62038881 Msa0304680:CDS
TTACCAGCCTCATAGATGTT+GGG 0.519232 2_3:+62040677 Msa0304680:CDS
GAATAGAACCGAGATATAGT+AGG 0.521304 2_3:-62038628 None:intergenic
GATTCAAGGAGGCCAAAGCC+AGG 0.523097 2_3:+62040786 Msa0304680:CDS
TCAGGGAAGAATTCAAATCC+TGG 0.524099 2_3:-62042882 None:intergenic
TAGAAAGCATAAGGAACTCC+AGG 0.524275 2_3:-62040561 None:intergenic
AAATATAGTATTTGTGGTGT+TGG 0.526264 2_3:+62042989 Msa0304680:three_prime_UTR
ACAATGCTTCCACCATCATC+CGG 0.527676 2_3:-62040999 None:intergenic
ATGGAGGAAGCAAGGTGGAA+AGG 0.528791 2_3:+62041343 Msa0304680:CDS
ACTCAATGCCAAGGGAATTG+AGG 0.529142 2_3:+62041877 Msa0304680:CDS
TGGTGGTAACATTCTTTCCA+AGG 0.530172 2_3:+62038901 Msa0304680:CDS
TGCCCTCGCAATCCGGATGA+TGG 0.530747 2_3:+62040987 Msa0304680:CDS
GTTGGTGAATGATGATGAAT+GGG 0.532834 2_3:-62038656 None:intergenic
ATTCTTCACTTTCTGGGTGA+AGG 0.535092 2_3:-62042725 None:intergenic
AAGGACCAGAATCATAGAAA+AGG 0.537043 2_3:+62040248 Msa0304680:CDS
TTGGGGCAACCTTAATTGGA+AGG 0.538056 2_3:+62040364 Msa0304680:CDS
AATAAACTCCTACTATATCT+CGG 0.539985 2_3:+62038620 Msa0304680:five_prime_UTR
AACATAAATCATGAAACGCC+TGG 0.540335 2_3:-62042020 None:intergenic
CCTCCCAACATCTATGAGGC+TGG 0.541750 2_3:-62040680 None:intergenic
CACGAATTAAGAAATCAAAC+CGG 0.541994 2_3:-62038580 None:intergenic
ACCAAGGCTCGTGTTCTTGG+CGG 0.542154 2_3:+62042906 Msa0304680:CDS
ACATCCTCCCAACATCTATG+AGG 0.542285 2_3:-62040684 None:intergenic
CAACATCAACCAAAGATCAA+TGG 0.542537 2_3:+62042563 Msa0304680:CDS
ACTCTTGAGCATGATCTCCC+TGG 0.542825 2_3:+62042804 Msa0304680:CDS
GAATGATGATGAATGGGAAA+AGG 0.543584 2_3:-62038650 None:intergenic
CCACCATCATCCGGATTGCG+AGG 0.547386 2_3:-62040990 None:intergenic
CTAAAGCTGGGCTTATTAGT+GGG 0.547451 2_3:+62041519 Msa0304680:CDS
ATATGCGAGCTCAAGAGGCC+AGG 0.547877 2_3:+62042002 Msa0304680:CDS
CACAGTGCACTTCAGAGCCT+CGG 0.549999 2_3:-62040959 None:intergenic
GAACACGAGCCTTGGTGTCA+GGG 0.550469 2_3:-62042899 None:intergenic
GTGGTTCCCATGTGGCCTGA+GGG 0.550831 2_3:+62041770 Msa0304680:CDS
CTGAAGATGCTGCTAAAGCT+GGG 0.551525 2_3:+62041507 Msa0304680:CDS
AACTAAGTAGTAAGTATGGG+TGG 0.551950 2_3:-62042945 None:intergenic
TGTCTGGGATATGAGAATCT+TGG 0.552039 2_3:-62040617 None:intergenic
TCAGGTTCTGGTCTTTCAGG+AGG 0.552348 2_3:-62041971 None:intergenic
AAAAGCACAAGAAGGTGTTA+GGG 0.552796 2_3:+62040842 Msa0304680:CDS
CAGTTCAGGCAATATTAGAC+TGG 0.553731 2_3:+62041810 Msa0304680:CDS
ATGGCGCAAATTCTGCTACA+TGG 0.553894 2_3:+62038830 Msa0304680:CDS
CCTTCACTGGAAACCCCAAT+GGG 0.554387 2_3:-62042843 None:intergenic
TGAAAAGACTCATTCCATTG+AGG 0.555517 2_3:-62040282 None:intergenic
TTACTGTGCCCATTTGGCAT+CGG 0.556368 2_3:+62040308 Msa0304680:CDS
AAGGTGGTCCTAGGGAACCT+TGG 0.556879 2_3:+62041255 Msa0304680:CDS
GTTCGGAAAAGTGAATGAAA+CGG 0.557902 2_3:-62041170 None:intergenic
AAACAAAACATCCCAAGCAA+TGG 0.559086 2_3:-62041306 None:intergenic
TATTGAAGCACTCAATGCCA+AGG 0.561553 2_3:+62041868 Msa0304680:CDS
CGAAACTAAGTAGTAAGTAT+GGG 0.562276 2_3:-62042948 None:intergenic
GCAAGATTGAAGCTGGGGAA+AGG 0.562968 2_3:+62041732 Msa0304680:CDS
TGCCTATTAGCTAAATGATA+GGG 0.565055 2_3:-62042627 None:intergenic
ATATCATGCCAAGGTTCCCT+AGG 0.565440 2_3:-62041263 None:intergenic
TGGTGAGGAAATAGATAGGT+GGG 0.565449 2_3:+62040416 Msa0304680:CDS
TCCTTGGAAGTTGCTATGCG+TGG 0.566885 2_3:+62041633 Msa0304680:CDS
GATGTGCTGTGTCCAGAGTT+CGG 0.567045 2_3:-62041187 None:intergenic
TTGTTAGCAAGATTGAAGCT+GGG 0.569020 2_3:+62041726 Msa0304680:CDS
AGCTGGGCTTATTAGTGGGA+AGG 0.572547 2_3:+62041523 Msa0304680:CDS
GGAAGCGTGACAGAGCTGCC+AGG 0.573645 2_3:+62042864 Msa0304680:CDS
GAGCAGAGATGGAGGAAGCA+AGG 0.573687 2_3:+62041335 Msa0304680:CDS
CACCATCATCCGGATTGCGA+GGG 0.575824 2_3:-62040989 None:intergenic
TAGAGACTCTGAAATTGCAA+TGG 0.576832 2_3:+62042593 Msa0304680:CDS
AGGCAATATTAGACTGGCAG+AGG 0.578738 2_3:+62041816 Msa0304680:CDS
CAATATTAGACTGGCAGAGG+AGG 0.580334 2_3:+62041819 Msa0304680:CDS
CCTTCTCCGCTATCCCATTG+GGG 0.580634 2_3:+62042830 Msa0304680:CDS
TGGGACACCCTCAGGCCACA+TGG 0.580916 2_3:-62041777 None:intergenic
CCAGGAGGAGACATCACACT+TGG 0.582493 2_3:+62040804 Msa0304680:CDS
TATTGGGGACAAAATTGTCT+GGG 0.586684 2_3:-62040632 None:intergenic
TTGATGCAATCACAAAAGCA+AGG 0.590614 2_3:+62040709 Msa0304680:CDS
TGGGGCAACCTTAATTGGAA+GGG 0.592393 2_3:+62040365 Msa0304680:CDS
TGCTATGCGTGGAGTGCTGA+TGG 0.592466 2_3:+62041644 Msa0304680:CDS
TAGAGAAAGCACGAGTGGGA+AGG 0.593690 2_3:+62040229 Msa0304680:CDS
AAGGGCGTACATTCCTGTTG+AGG 0.595296 2_3:+62040383 Msa0304680:CDS
AACTATGATAAATTCTAGCT+AGG 0.596031 2_3:+62043143 Msa0304680:three_prime_UTR
GATGATGAATACATAATCGT+CGG 0.596091 2_3:+62042534 Msa0304680:CDS
GATAGCGGAGAAGGTGGCCA+GGG 0.597233 2_3:-62042821 None:intergenic
TGGGTGGTGAGGAAATAGAT+AGG 0.598716 2_3:+62040412 Msa0304680:CDS
CAGTGAGTTGCCAAATGAAG+TGG 0.600965 2_3:+62041079 Msa0304680:CDS
TGGGACCTTCAAGCCTTGAG+TGG 0.600994 2_3:-62041286 None:intergenic
CTGCCTTGGCAATCGTGAGG+TGG 0.601677 2_3:+62041928 Msa0304680:CDS
CAATGGGATAGCGGAGAAGG+TGG 0.603242 2_3:-62042827 None:intergenic
AAGTGAAGAATGCATTAGGA+AGG 0.603278 2_3:+62042737 Msa0304680:CDS
TGTTAGCAAGATTGAAGCTG+GGG 0.605624 2_3:+62041727 Msa0304680:CDS
ACTAAGTAGTAAGTATGGGT+GGG 0.609032 2_3:-62042944 None:intergenic
GATTTAGAGAAAGCACGAGT+GGG 0.609235 2_3:+62040225 Msa0304680:CDS
ATATAGTAGAATACATGTCA+AGG 0.610154 2_3:-62043169 None:intergenic
TGTGGTTCCCATGTGGCCTG+AGG 0.610251 2_3:+62041769 Msa0304680:CDS
AATCGTGAGGTGGTAAAACA+AGG 0.614433 2_3:+62041938 Msa0304680:CDS
AAGTAGTAAGTATGGGTGGG+AGG 0.614752 2_3:-62042941 None:intergenic
CTCCTGCAAGTTGTATATTG+GGG 0.614898 2_3:-62040647 None:intergenic
AGGTTTCTTGAAGCATGCCA+AGG 0.615494 2_3:-62042701 None:intergenic
GAAAGATGATAATCCTATTG+GGG 0.615615 2_3:+62040347 Msa0304680:CDS
TGAGGAGGTATTGGGTGGTG+AGG 0.615634 2_3:+62040401 Msa0304680:CDS
CAGAGATGGAGGAAGCAAGG+TGG 0.616614 2_3:+62041338 Msa0304680:CDS
GGCGTACATTCCTGTTGAGG+AGG 0.617287 2_3:+62040386 Msa0304680:CDS
TCCACGCATAGCAACTTCCA+AGG 0.620565 2_3:-62041634 None:intergenic
GGAGGCATTGATCTCTGTGA+TGG 0.621298 2_3:+62041134 Msa0304680:CDS
CTTCTGCCTTGGCAATCGTG+AGG 0.622625 2_3:+62041925 Msa0304680:CDS
GGGACACCCTCAGGCCACAT+GGG 0.624478 2_3:-62041776 None:intergenic
GCTTTCTACACACAAAGACA+AGG 0.625992 2_3:+62040576 Msa0304680:CDS
GGCACTTAATATACATTACA+GGG 0.626213 2_3:+62040730 Msa0304680:CDS
TGATTTAGAGAAAGCACGAG+TGG 0.626791 2_3:+62040224 Msa0304680:CDS
TACTCATGATCAAGAAACTG+AGG 0.627462 2_3:+62040929 Msa0304680:CDS
TGAATTCTTCCCTGACACCA+AGG 0.627778 2_3:+62042890 Msa0304680:CDS
AGGGAATTGAGGAAGATCCT+CGG 0.629175 2_3:+62041888 Msa0304680:CDS
TGGAAACCCCAATGGGATAG+CGG 0.631998 2_3:-62042836 None:intergenic
CTTGGCATGATATCCACTCA+AGG 0.633068 2_3:+62041273 Msa0304680:CDS
ATGGTTTCCGCATGTCGTTG+TGG 0.633145 2_3:+62042670 Msa0304680:CDS
GCTAATAGGCAGCCTGCAAG+GGG 0.633258 2_3:+62042639 Msa0304680:CDS
AGTGAGTTGCCAAATGAAGT+GGG 0.635597 2_3:+62041080 Msa0304680:CDS
GGTATTAAGCCTGAAGACAT+TGG 0.635944 2_3:+62041665 Msa0304680:CDS
AAACTCAAGAATATTAGTGG+TGG 0.636100 2_3:+62038884 Msa0304680:CDS
CTATTTAGATCTATTGACGG+TGG 0.636765 2_3:+62041458 Msa0304680:CDS
TTACCACCTCACGATTGCCA+AGG 0.638073 2_3:-62041931 None:intergenic
ATTGAAGCACTCAATGCCAA+GGG 0.639765 2_3:+62041869 Msa0304680:CDS
ATCAACCAAAGATCAATGGA+TGG 0.639768 2_3:+62042567 Msa0304680:CDS
AAGGTTCACTGTGTATGTTG+TGG 0.644280 2_3:+62041751 Msa0304680:CDS
TAATGCCTAGAGCCCAGTTG+CGG 0.646642 2_3:-62040524 None:intergenic
CCTCGCAATCCGGATGATGG+TGG 0.647794 2_3:+62040990 Msa0304680:CDS
TGTTTGGGATGATAGAACGT+CGG 0.648160 2_3:+62040875 Msa0304680:CDS
CCTCCTTGAATCCCTTACCA+AGG 0.648283 2_3:-62040775 None:intergenic
GTGGTGAGGAAATAGATAGG+TGG 0.648470 2_3:+62040415 Msa0304680:CDS
GCTCATACCACAACGACATG+CGG 0.651651 2_3:-62042677 None:intergenic
TCCACGTCTCTTGATCATCA+GGG 0.654558 2_3:-62041427 None:intergenic
TCCCTGATGATCAAGAGACG+TGG 0.655773 2_3:+62041426 Msa0304680:CDS
CAGCATCTTCAGGAGTCTCG+GGG 0.656506 2_3:-62041496 None:intergenic
TGTTTCAAAAGACCGCAACT+GGG 0.657307 2_3:+62040512 Msa0304680:CDS
CCAGCCTCATAGATGTTGGG+AGG 0.659901 2_3:+62040680 Msa0304680:CDS
CCTTGGTAAGGGATTCAAGG+AGG 0.659944 2_3:+62040775 Msa0304680:CDS
GAAACTGAGGAATTCTTCCG+AGG 0.663978 2_3:+62040942 Msa0304680:CDS
AAGAATGTCAAATAGTTCCG+AGG 0.664275 2_3:-62041905 None:intergenic
CTTGAGTGGATATCATGCCA+AGG 0.664717 2_3:-62041272 None:intergenic
CCTGTTGAGGAGGTATTGGG+TGG 0.671652 2_3:+62040396 Msa0304680:CDS
TTAACTTTGAGCAGAGATGG+AGG 0.672683 2_3:+62041327 Msa0304680:CDS
CAATGACTGTAATGGTACAA+TGG 0.673114 2_3:+62043018 Msa0304680:three_prime_UTR
ATCATCAGGGAAAGTTACTG+GGG 0.676162 2_3:-62041414 None:intergenic
GCATCTTCAAGCTCTCTCAG+AGG 0.687558 2_3:-62041377 None:intergenic
AGACTGGCAGAGGAGGACAA+TGG 0.689150 2_3:+62041826 Msa0304680:CDS
GGTGTGAGCAATGACTGTAA+TGG 0.694872 2_3:+62043010 Msa0304680:three_prime_UTR
CCCAATATACAACTTGCAGG+AGG 0.700952 2_3:+62040648 Msa0304680:CDS
TCAAGGAGGCCAAAGCCAGG+AGG 0.704971 2_3:+62040789 Msa0304680:CDS
TTTCTGATGATGAGTAAACA+TGG 0.707021 2_3:-62041042 None:intergenic
TGTATGTTGTGGTTCCCATG+TGG 0.707881 2_3:+62041762 Msa0304680:CDS
TCGTTGTGGTATGAGCACCT+TGG 0.762594 2_3:+62042684 Msa0304680:CDS
ACTTAATATACATTACAGGG+TGG 0.764594 2_3:+62040733 Msa0304680:CDS
TCGGAAAAGTGAATGAAACG+GGG 0.795326 2_3:-62041168 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAATCAAATCTT+CGG - chr2_3:62039534-62039553 None:intergenic 10.0%
!! CAAATGATTAGAATTTAAAA+TGG - chr2_3:62038774-62038793 None:intergenic 15.0%
!!! TTTTCTTCCTTTTTTTTTTT+TGG + chr2_3:62038930-62038949 Msa0304680:intron 15.0%
!! ATAAAAGCCAAAAAAAAAAA+AGG - chr2_3:62038940-62038959 None:intergenic 15.0%
!!! ATTTTTTGTGAAAAAGAAAA+AGG + chr2_3:62039548-62039567 Msa0304680:intron 15.0%
!!! TTTTTTGTGAAAAAGAAAAA+GGG + chr2_3:62039549-62039568 Msa0304680:intron 15.0%
!! TAAAAAAAGTAAATCACTTT+AGG + chr2_3:62039769-62039788 Msa0304680:intron 15.0%
!!! TTGATTTTAAAGTTATTTGT+AGG + chr2_3:62042289-62042308 Msa0304680:intron 15.0%
!! AATTATTCATTTAGATAAGT+TGG + chr2_3:62042339-62042358 Msa0304680:intron 15.0%
!! TAACTATAGTTAAACTTTGT+AGG + chr2_3:62038801-62038820 Msa0304680:intron 20.0%
!!! ATTCAATCTGAAATTTTGTT+AGG + chr2_3:62039256-62039275 Msa0304680:intron 20.0%
!!! GTTAGGTTAATTGTAATTTT+TGG + chr2_3:62039273-62039292 Msa0304680:intron 20.0%
!! TAAACTCATAAATGTTTGAA+TGG + chr2_3:62039451-62039470 Msa0304680:intron 20.0%
!! TAGATTGTAAGAATGAAAAA+AGG + chr2_3:62039579-62039598 Msa0304680:intron 20.0%
!! AGATTGTAAGAATGAAAAAA+GGG + chr2_3:62039580-62039599 Msa0304680:intron 20.0%
!! AAAAGAACATTAAATGTGAT+TGG - chr2_3:62039682-62039701 None:intergenic 20.0%
!! ATCAAAAGAATAGATTGTTA+AGG - chr2_3:62039879-62039898 None:intergenic 20.0%
!!! GAAACAAAAATATTTTCATC+AGG - chr2_3:62040014-62040033 None:intergenic 20.0%
!! ATTGAAAATCAATATTTCCT+TGG + chr2_3:62041617-62041636 Msa0304680:CDS 20.0%
!! AAGGAATGTTATACAAAATA+TGG - chr2_3:62042086-62042105 None:intergenic 20.0%
!!! CTCAATCATAAAAAAAGTAT+TGG - chr2_3:62042123-62042142 None:intergenic 20.0%
!! AAAGTTATTTGTAGGAAAAA+AGG + chr2_3:62042297-62042316 Msa0304680:intron 20.0%
!!! AAGAGTTTTAACTCTTTAAC+CGG + chr2_3:62038561-62038580 Msa0304680:five_prime_UTR 25.0%
! AGTAGGAGTTTATTTATTCA+AGG - chr2_3:62038614-62038633 None:intergenic 25.0%
! AATAAACTCCTACTATATCT+CGG + chr2_3:62038620-62038639 Msa0304680:five_prime_UTR 25.0%
! TAAACTTTGTAGGTAATTGA+TGG + chr2_3:62038811-62038830 Msa0304680:intron 25.0%
! GATAAACTCAAGAATATTAG+TGG + chr2_3:62038881-62038900 Msa0304680:CDS 25.0%
!!! TCTGTTATTTGTTTGTTGTA+CGG + chr2_3:62039016-62039035 Msa0304680:intron 25.0%
!!! TGATGGGATATTTTTAAGAA+TGG + chr2_3:62039839-62039858 Msa0304680:intron 25.0%
!!! GATGGGATATTTTTAAGAAT+GGG + chr2_3:62039840-62039859 Msa0304680:intron 25.0%
! TTTGTACCTTTATTACATGA+TGG + chr2_3:62040037-62040056 Msa0304680:intron 25.0%
!! GAAGGATAATTTTTCACTTT+TGG + chr2_3:62040059-62040078 Msa0304680:intron 25.0%
! TTAGATAAGACAAAACTTTG+AGG + chr2_3:62040155-62040174 Msa0304680:intron 25.0%
! TGAAAGATGATAATCCTATT+GGG + chr2_3:62040346-62040365 Msa0304680:CDS 25.0%
! ATCTTTGAATTTCCATGAAT+TGG - chr2_3:62040468-62040487 None:intergenic 25.0%
! TTCCTCTGTTAAAAAAAGAT+GGG + chr2_3:62040898-62040917 Msa0304680:CDS 25.0%
! ATTGTCCAGAATATAGAAAT+TGG + chr2_3:62041017-62041036 Msa0304680:CDS 25.0%
!! TACTCATCATCAGAAAATTT+TGG + chr2_3:62041049-62041068 Msa0304680:CDS 25.0%
! TTATTTAATCCCACTTCATT+TGG - chr2_3:62041092-62041111 None:intergenic 25.0%
!!! GAATTTTTTTTGTCCAAATG+TGG - chr2_3:62042366-62042385 None:intergenic 25.0%
! TGAGATTAATAAAAGAAAGC+TGG + chr2_3:62042417-62042436 Msa0304680:intron 25.0%
! TTCACCAAATATAGTATTTG+TGG + chr2_3:62042983-62043002 Msa0304680:three_prime_UTR 25.0%
! AACACCACAAATACTATATT+TGG - chr2_3:62042990-62043009 None:intergenic 25.0%
! AAATATAGTATTTGTGGTGT+TGG + chr2_3:62042989-62043008 Msa0304680:three_prime_UTR 25.0%
! TAATAAGCTTGAGATGATTA+AGG + chr2_3:62043074-62043093 Msa0304680:three_prime_UTR 25.0%
!! AACTATGATAAATTCTAGCT+AGG + chr2_3:62043143-62043162 Msa0304680:three_prime_UTR 25.0%
! ATATAGTAGAATACATGTCA+AGG - chr2_3:62043172-62043191 None:intergenic 25.0%
GGTTAAAGAGTTAAAACTCT+TGG - chr2_3:62038562-62038581 None:intergenic 30.0%
CACGAATTAAGAAATCAAAC+CGG - chr2_3:62038583-62038602 None:intergenic 30.0%
GGAGTTTATTTATTCAAGGA+TGG - chr2_3:62038610-62038629 None:intergenic 30.0%
AAACTCAAGAATATTAGTGG+TGG + chr2_3:62038884-62038903 Msa0304680:CDS 30.0%
! GAGATTTGTTCTTTCAAACA+TGG + chr2_3:62039355-62039374 Msa0304680:intron 30.0%
! AAATGTTTGAATGGTAGTGA+AGG + chr2_3:62039460-62039479 Msa0304680:intron 30.0%
!! TTTAGGCCTTTAGAAGTTTT+TGG + chr2_3:62039786-62039805 Msa0304680:intron 30.0%
!! TTAGGCCTTTAGAAGTTTTT+GGG + chr2_3:62039787-62039806 Msa0304680:intron 30.0%
ATTTGCCCAAAAACTTCTAA+AGG - chr2_3:62039795-62039814 None:intergenic 30.0%
TCTTAAAAATATCCCATCAG+AGG - chr2_3:62039838-62039857 None:intergenic 30.0%
! ATCTTAACCTTGTTCGTTTT+AGG + chr2_3:62039897-62039916 Msa0304680:intron 30.0%
! TCTTAACCTTGTTCGTTTTA+GGG + chr2_3:62039898-62039917 Msa0304680:intron 30.0%
! TACCTTTATTACATGATGGA+AGG + chr2_3:62040041-62040060 Msa0304680:intron 30.0%
ATCCTTCCATCATGTAATAA+AGG - chr2_3:62040046-62040065 None:intergenic 30.0%
ATCAATGGTTGCATAAAGTT+TGG - chr2_3:62040208-62040227 None:intergenic 30.0%
GTGAAAGATGATAATCCTAT+TGG + chr2_3:62040345-62040364 Msa0304680:CDS 30.0%
GAAAGATGATAATCCTATTG+GGG + chr2_3:62040347-62040366 Msa0304680:CDS 30.0%
GTGAATAAAGAACCAATTCA+TGG + chr2_3:62040453-62040472 Msa0304680:CDS 30.0%
ATTAGAAGTCCTAAATTTCC+TGG + chr2_3:62040543-62040562 Msa0304680:CDS 30.0%
AGGCACTTAATATACATTAC+AGG + chr2_3:62040729-62040748 Msa0304680:CDS 30.0%
GGCACTTAATATACATTACA+GGG + chr2_3:62040730-62040749 Msa0304680:CDS 30.0%
ACTTAATATACATTACAGGG+TGG + chr2_3:62040733-62040752 Msa0304680:CDS 30.0%
TGTTTATACTGAGATTTCCT+TGG + chr2_3:62040758-62040777 Msa0304680:CDS 30.0%
! TTAGGGTATTAATGCTTGTT+TGG + chr2_3:62040859-62040878 Msa0304680:CDS 30.0%
! TAGGGTATTAATGCTTGTTT+GGG + chr2_3:62040860-62040879 Msa0304680:CDS 30.0%
GTTCCTCTGTTAAAAAAAGA+TGG + chr2_3:62040897-62040916 Msa0304680:CDS 30.0%
!!! AACCCATCTTTTTTTAACAG+AGG - chr2_3:62040903-62040922 None:intergenic 30.0%
!! GTTAAAAAAAGATGGGTTGA+TGG + chr2_3:62040905-62040924 Msa0304680:CDS 30.0%
! TTTCTGATGATGAGTAAACA+TGG - chr2_3:62041045-62041064 None:intergenic 30.0%
! TCATCATCAGAAAATTTTGG+TGG + chr2_3:62041052-62041071 Msa0304680:CDS 30.0%
CAGCTATTTAGATCTATTGA+CGG + chr2_3:62041455-62041474 Msa0304680:CDS 30.0%
GGAAGGATAACATAATAGAT+AGG + chr2_3:62041540-62041559 Msa0304680:CDS 30.0%
! TCTTAAGTGAAAGCTCTTTT+GGG - chr2_3:62041706-62041725 None:intergenic 30.0%
! ATCTTAAGTGAAAGCTCTTT+TGG - chr2_3:62041707-62041726 None:intergenic 30.0%
ATATAATCTGAATCAGGTTC+TGG - chr2_3:62041986-62042005 None:intergenic 30.0%
TTACTTACCTATCATCATCT+TGG - chr2_3:62042050-62042069 None:intergenic 30.0%
!! ATTGGAAAGAAAGTGTTAGA+AGG - chr2_3:62042105-62042124 None:intergenic 30.0%
GGTTTGAGTAAAATTCATGT+GGG - chr2_3:62042205-62042224 None:intergenic 30.0%
AGGTTTGAGTAAAATTCATG+TGG - chr2_3:62042206-62042225 None:intergenic 30.0%
! ATTTTCTTGGTGAAGGAAAA+GGG - chr2_3:62042458-62042477 None:intergenic 30.0%
! TATTTTCTTGGTGAAGGAAA+AGG - chr2_3:62042459-62042478 None:intergenic 30.0%
! AAAGGATATTTTCTTGGTGA+AGG - chr2_3:62042465-62042484 None:intergenic 30.0%
ACCAAGAAAATATCCTTTGA+TGG + chr2_3:62042467-62042486 Msa0304680:intron 30.0%
! ACCATCAAAGGATATTTTCT+TGG - chr2_3:62042471-62042490 None:intergenic 30.0%
! AGAAAATATCCTTTGATGGT+AGG + chr2_3:62042471-62042490 Msa0304680:intron 30.0%
GATGATGAATACATAATCGT+CGG + chr2_3:62042534-62042553 Msa0304680:CDS 30.0%
AACCCTATCATTTAGCTAAT+AGG + chr2_3:62042625-62042644 Msa0304680:CDS 30.0%
TGCCTATTAGCTAAATGATA+GGG - chr2_3:62042630-62042649 None:intergenic 30.0%
TAATGCATTCTTCACTTTCT+GGG - chr2_3:62042734-62042753 None:intergenic 30.0%
CGAAACTAAGTAGTAAGTAT+GGG - chr2_3:62042951-62042970 None:intergenic 30.0%
ACGAAACTAAGTAGTAAGTA+TGG - chr2_3:62042952-62042971 None:intergenic 30.0%
AAAAGAAAAAACAGTTTCGC+AGG - chr2_3:62043045-62043064 None:intergenic 30.0%
GAATAGAACCGAGATATAGT+AGG - chr2_3:62038631-62038650 None:intergenic 35.0%
! GAATGATGATGAATGGGAAA+AGG - chr2_3:62038653-62038672 None:intergenic 35.0%
! GTTGGTGAATGATGATGAAT+GGG - chr2_3:62038659-62038678 None:intergenic 35.0%
!! AGTTGGTGAATGATGATGAA+TGG - chr2_3:62038660-62038679 None:intergenic 35.0%
GAGATGAAAATGAGAGTAGT+TGG - chr2_3:62038677-62038696 None:intergenic 35.0%
CAAAATCGAAGAAGATGAAG+AGG - chr2_3:62038731-62038750 None:intergenic 35.0%
TCTTCATGCTACAATCTTTG+AGG + chr2_3:62038856-62038875 Msa0304680:CDS 35.0%
! ACGCATTCAATCAGAAGTAT+CGG + chr2_3:62039140-62039159 Msa0304680:intron 35.0%
CAGTTCAAGTCTTTCTGATA+AGG - chr2_3:62039430-62039449 None:intergenic 35.0%
CTAGTTAGTTGGAAGGATAA+AGG + chr2_3:62039484-62039503 Msa0304680:intron 35.0%
! AAAGGGAAAGTGTAAAGAGA+TGG + chr2_3:62039597-62039616 Msa0304680:intron 35.0%
ATGAACTTCTGTCTTATCCA+TGG - chr2_3:62039637-62039656 None:intergenic 35.0%
GATAAGACAGAAGTTCATCA+AGG + chr2_3:62039639-62039658 Msa0304680:intron 35.0%
!!! TTTTAGGGTAGACTTTTGCT+TGG + chr2_3:62039913-62039932 Msa0304680:intron 35.0%
TGCACTTATGCTAAAACGAA+GGG - chr2_3:62039943-62039962 None:intergenic 35.0%
ATGCACTTATGCTAAAACGA+AGG - chr2_3:62039944-62039963 None:intergenic 35.0%
CTAACGCATGTAAACATAAG+TGG - chr2_3:62039989-62040008 None:intergenic 35.0%
TCGTGCTTTCTCTAAATCAA+TGG - chr2_3:62040223-62040242 None:intergenic 35.0%
AAGGACCAGAATCATAGAAA+AGG + chr2_3:62040248-62040267 Msa0304680:CDS 35.0%
! ATGCTCCTTTTCTATGATTC+TGG - chr2_3:62040256-62040275 None:intergenic 35.0%
TGAAAAGACTCATTCCATTG+AGG - chr2_3:62040285-62040304 None:intergenic 35.0%
TATGATATCCGATGCCAAAT+GGG - chr2_3:62040319-62040338 None:intergenic 35.0%
ATATGATATCCGATGCCAAA+TGG - chr2_3:62040320-62040339 None:intergenic 35.0%
!! AGATAGGTGGGTTGAAATAT+TGG + chr2_3:62040428-62040447 Msa0304680:CDS 35.0%
CAAAAAATTGCAGCTTCACA+TGG - chr2_3:62040491-62040510 None:intergenic 35.0%
TAAGGAACTCCAGGAAATTT+AGG - chr2_3:62040555-62040574 None:intergenic 35.0%
! CTTTGTGTGTAGAAAGCATA+AGG - chr2_3:62040573-62040592 None:intergenic 35.0%
TATTGGGGACAAAATTGTCT+GGG - chr2_3:62040635-62040654 None:intergenic 35.0%
ATATTGGGGACAAAATTGTC+TGG - chr2_3:62040636-62040655 None:intergenic 35.0%
TTGATGCAATCACAAAAGCA+AGG + chr2_3:62040709-62040728 Msa0304680:CDS 35.0%
ATACTGAGATTTCCTTGGTA+AGG + chr2_3:62040763-62040782 Msa0304680:CDS 35.0%
TACTGAGATTTCCTTGGTAA+GGG + chr2_3:62040764-62040783 Msa0304680:CDS 35.0%
! CTCAAGAAAAAAGCACAAGA+AGG + chr2_3:62040834-62040853 Msa0304680:CDS 35.0%
!! AAAAAGCACAAGAAGGTGTT+AGG + chr2_3:62040841-62040860 Msa0304680:CDS 35.0%
!! AAAAGCACAAGAAGGTGTTA+GGG + chr2_3:62040842-62040861 Msa0304680:CDS 35.0%
TACTCATGATCAAGAAACTG+AGG + chr2_3:62040929-62040948 Msa0304680:CDS 35.0%
! TGGTGCCAATTTCTATATTC+TGG - chr2_3:62041025-62041044 None:intergenic 35.0%
!! TCATCAGAAAATTTTGGTGG+TGG + chr2_3:62041055-62041074 Msa0304680:CDS 35.0%
!! CGAAGAATTGTGAGTTTTGT+AGG + chr2_3:62041113-62041132 Msa0304680:CDS 35.0%
!! AGAATTGTGAGTTTTGTAGG+AGG + chr2_3:62041116-62041135 Msa0304680:CDS 35.0%
TTCGGAAAAGTGAATGAAAC+GGG - chr2_3:62041172-62041191 None:intergenic 35.0%
GTTCGGAAAAGTGAATGAAA+CGG - chr2_3:62041173-62041192 None:intergenic 35.0%
AATAGAAAAAGGTGGTCCTA+GGG + chr2_3:62041247-62041266 Msa0304680:CDS 35.0%
AACAAAACATCCCAAGCAAT+GGG - chr2_3:62041308-62041327 None:intergenic 35.0%
AAACAAAACATCCCAAGCAA+TGG - chr2_3:62041309-62041328 None:intergenic 35.0%
! TGTTTAACTTTGAGCAGAGA+TGG + chr2_3:62041324-62041343 Msa0304680:CDS 35.0%
CTATTTAGATCTATTGACGG+TGG + chr2_3:62041458-62041477 Msa0304680:CDS 35.0%
ATTGTTAGCAAGATTGAAGC+TGG + chr2_3:62041725-62041744 Msa0304680:CDS 35.0%
TTGTTAGCAAGATTGAAGCT+GGG + chr2_3:62041726-62041745 Msa0304680:CDS 35.0%
AAGAATGTCAAATAGTTCCG+AGG - chr2_3:62041908-62041927 None:intergenic 35.0%
TATTTGACATTCTTCTGCCT+TGG + chr2_3:62041914-62041933 Msa0304680:CDS 35.0%
AACATAAATCATGAAACGCC+TGG - chr2_3:62042023-62042042 None:intergenic 35.0%
ATGATTGAGCAATGTTCACA+TGG + chr2_3:62042134-62042153 Msa0304680:intron 35.0%
TGATTGAGCAATGTTCACAT+GGG + chr2_3:62042135-62042154 Msa0304680:intron 35.0%
GAAAAGGAGACCTACTAAAT+AGG - chr2_3:62042169-62042188 None:intergenic 35.0%
!! GGGTCTCAATCATTTTGAAA+AGG - chr2_3:62042185-62042204 None:intergenic 35.0%
!! TAGATAAGTTGGTCCACATT+TGG + chr2_3:62042350-62042369 Msa0304680:intron 35.0%
! CATTGATCTTTGGTTGATGT+TGG - chr2_3:62042565-62042584 None:intergenic 35.0%
CAACATCAACCAAAGATCAA+TGG + chr2_3:62042563-62042582 Msa0304680:CDS 35.0%
ATCAACCAAAGATCAATGGA+TGG + chr2_3:62042567-62042586 Msa0304680:CDS 35.0%
!! TAGAGACTCTGAAATTGCAA+TGG + chr2_3:62042593-62042612 Msa0304680:CDS 35.0%
!! AGAGACTCTGAAATTGCAAT+GGG + chr2_3:62042594-62042613 Msa0304680:CDS 35.0%
CTGCCTATTAGCTAAATGAT+AGG - chr2_3:62042631-62042650 None:intergenic 35.0%
CTAATGCATTCTTCACTTTC+TGG - chr2_3:62042735-62042754 None:intergenic 35.0%
CAGAAAGTGAAGAATGCATT+AGG + chr2_3:62042733-62042752 Msa0304680:CDS 35.0%
AAGTGAAGAATGCATTAGGA+AGG + chr2_3:62042737-62042756 Msa0304680:CDS 35.0%
ACCAGATTGCTGACAAATAT+TGG + chr2_3:62042763-62042782 Msa0304680:CDS 35.0%
CCAGATTGCTGACAAATATT+GGG + chr2_3:62042764-62042783 Msa0304680:CDS 35.0%
ACTAAGTAGTAAGTATGGGT+GGG - chr2_3:62042947-62042966 None:intergenic 35.0%
AACTAAGTAGTAAGTATGGG+TGG - chr2_3:62042948-62042967 None:intergenic 35.0%
CAATGACTGTAATGGTACAA+TGG + chr2_3:62043018-62043037 Msa0304680:three_prime_UTR 35.0%
TGGTGGTAACATTCTTTCCA+AGG + chr2_3:62038901-62038920 Msa0304680:CDS 40.0%
!! AAGGAAGAAAAGAAGCACCT+TGG - chr2_3:62038921-62038940 None:intergenic 40.0%
! GTAGAGTTTTGCCACTGTTT+TGG + chr2_3:62039295-62039314 Msa0304680:intron 40.0%
TAGAGATGAAGCCAAAACAG+TGG - chr2_3:62039309-62039328 None:intergenic 40.0%
!! GTAGTGAAGGACTAGTTAGT+TGG + chr2_3:62039473-62039492 Msa0304680:intron 40.0%
!! TGAAGGACTAGTTAGTTGGA+AGG + chr2_3:62039477-62039496 Msa0304680:intron 40.0%
! AAGTGTAAAGAGATGGTGGT+TGG + chr2_3:62039604-62039623 Msa0304680:intron 40.0%
! AGTGTAAAGAGATGGTGGTT+GGG + chr2_3:62039605-62039624 Msa0304680:intron 40.0%
!!! ATTGTTTTTGCTCTCTGCGT+TGG + chr2_3:62039717-62039736 Msa0304680:intron 40.0%
AGTCTACCCTAAAACGAACA+AGG - chr2_3:62039907-62039926 None:intergenic 40.0%
! CAAAACTTTGAGGAGACAGT+TGG + chr2_3:62040165-62040184 Msa0304680:CDS 40.0%
TTTGAGGAGACAGTTGGATT+CGG + chr2_3:62040171-62040190 Msa0304680:CDS 40.0%
! TGATTTAGAGAAAGCACGAG+TGG + chr2_3:62040224-62040243 Msa0304680:CDS 40.0%
! GATTTAGAGAAAGCACGAGT+GGG + chr2_3:62040225-62040244 Msa0304680:CDS 40.0%
! AGGAGCATGTTAATCCTCAA+TGG + chr2_3:62040268-62040287 Msa0304680:CDS 40.0%
TCACATTTACTGTGCCCATT+TGG + chr2_3:62040302-62040321 Msa0304680:CDS 40.0%
AATGTACGCCCTTCCAATTA+AGG - chr2_3:62040376-62040395 None:intergenic 40.0%
!! ATTCCTGTTGAGGAGGTATT+GGG + chr2_3:62040393-62040412 Msa0304680:CDS 40.0%
TGGTGAGGAAATAGATAGGT+GGG + chr2_3:62040416-62040435 Msa0304680:CDS 40.0%
ATGTTTCAAAAGACCGCAAC+TGG + chr2_3:62040511-62040530 Msa0304680:CDS 40.0%
TGTTTCAAAAGACCGCAACT+GGG + chr2_3:62040512-62040531 Msa0304680:CDS 40.0%
! TAGAAAGCATAAGGAACTCC+AGG - chr2_3:62040564-62040583 None:intergenic 40.0%
GCTTTCTACACACAAAGACA+AGG + chr2_3:62040576-62040595 Msa0304680:CDS 40.0%
CACACAAAGACAAGGTTGTA+AGG + chr2_3:62040584-62040603 Msa0304680:CDS 40.0%
! TGTCTGGGATATGAGAATCT+TGG - chr2_3:62040620-62040639 None:intergenic 40.0%
CTCCTGCAAGTTGTATATTG+GGG - chr2_3:62040650-62040669 None:intergenic 40.0%
CCTCCTGCAAGTTGTATATT+GGG - chr2_3:62040651-62040670 None:intergenic 40.0%
ACCTCCTGCAAGTTGTATAT+TGG - chr2_3:62040652-62040671 None:intergenic 40.0%
TTACCAGCCTCATAGATGTT+GGG + chr2_3:62040677-62040696 Msa0304680:CDS 40.0%
TTTCCTTGGTAAGGGATTCA+AGG + chr2_3:62040772-62040791 Msa0304680:CDS 40.0%
! TGTTTGGGATGATAGAACGT+CGG + chr2_3:62040875-62040894 Msa0304680:CDS 40.0%
AGTGAGTTGCCAAATGAAGT+GGG + chr2_3:62041080-62041099 Msa0304680:CDS 40.0%
TCGGAAAAGTGAATGAAACG+GGG - chr2_3:62041171-62041190 None:intergenic 40.0%
!! TCATTCACTTTTCCGAACTC+TGG + chr2_3:62041175-62041194 Msa0304680:CDS 40.0%
TTTCATCAGCCTAACTTTCC+TGG + chr2_3:62041218-62041237 Msa0304680:CDS 40.0%
! ATTGAAGCACCAGGAAAGTT+AGG - chr2_3:62041230-62041249 None:intergenic 40.0%
!! CCTTTTTCTATTGAAGCACC+AGG - chr2_3:62041239-62041258 None:intergenic 40.0%
CCTGGTGCTTCAATAGAAAA+AGG + chr2_3:62041236-62041255 Msa0304680:CDS 40.0%
GGTGCTTCAATAGAAAAAGG+TGG + chr2_3:62041239-62041258 Msa0304680:CDS 40.0%
CAATAGAAAAAGGTGGTCCT+AGG + chr2_3:62041246-62041265 Msa0304680:CDS 40.0%
TTAACTTTGAGCAGAGATGG+AGG + chr2_3:62041327-62041346 Msa0304680:CDS 40.0%
ATCATCAGGGAAAGTTACTG+GGG - chr2_3:62041417-62041436 None:intergenic 40.0%
GATCATCAGGGAAAGTTACT+GGG - chr2_3:62041418-62041437 None:intergenic 40.0%
TGATCATCAGGGAAAGTTAC+TGG - chr2_3:62041419-62041438 None:intergenic 40.0%
CTAAAGCTGGGCTTATTAGT+GGG + chr2_3:62041519-62041538 Msa0304680:CDS 40.0%
GGTATTAAGCCTGAAGACAT+TGG + chr2_3:62041665-62041684 Msa0304680:CDS 40.0%
TGTTAGCAAGATTGAAGCTG+GGG + chr2_3:62041727-62041746 Msa0304680:CDS 40.0%
AAGGTTCACTGTGTATGTTG+TGG + chr2_3:62041751-62041770 Msa0304680:CDS 40.0%
CAGTTCAGGCAATATTAGAC+TGG + chr2_3:62041810-62041829 Msa0304680:CDS 40.0%
! TATTGAAGCACTCAATGCCA+AGG + chr2_3:62041868-62041887 Msa0304680:CDS 40.0%
! ATTGAAGCACTCAATGCCAA+GGG + chr2_3:62041869-62041888 Msa0304680:CDS 40.0%
AATCGTGAGGTGGTAAAACA+AGG + chr2_3:62041938-62041957 Msa0304680:CDS 40.0%
GCTCGCATATAATCTGAATC+AGG - chr2_3:62041992-62042011 None:intergenic 40.0%
AGATTATATGCGAGCTCAAG+AGG + chr2_3:62041997-62042016 Msa0304680:CDS 40.0%
GTTCATGCCAAGATGATGAT+AGG + chr2_3:62042040-62042059 Msa0304680:CDS 40.0%
GGTCTCCTTTCCTATTTAGT+AGG + chr2_3:62042156-62042175 Msa0304680:intron 40.0%
GGAGACCTACTAAATAGGAA+AGG - chr2_3:62042164-62042183 None:intergenic 40.0%
TACTATATGATGAGCGAGTG+AGG - chr2_3:62042226-62042245 None:intergenic 40.0%
CTATGAACTCCTACCATCAA+AGG - chr2_3:62042483-62042502 None:intergenic 40.0%
TAGCACCATCCATTGATCTT+TGG - chr2_3:62042575-62042594 None:intergenic 40.0%
ATTCTTCACTTTCTGGGTGA+AGG - chr2_3:62042728-62042747 None:intergenic 40.0%
CCCAATATTTGTCAGCAATC+TGG - chr2_3:62042767-62042786 None:intergenic 40.0%
TCAGGGAAGAATTCAAATCC+TGG - chr2_3:62042885-62042904 None:intergenic 40.0%
ATGGCGCAAATTCTGCTACA+TGG + chr2_3:62038830-62038849 Msa0304680:CDS 45.0%
! GGGAAAGTGTAAAGAGATGG+TGG + chr2_3:62039600-62039619 Msa0304680:intron 45.0%
! AAAGAGATGGTGGTTGGGAT+TGG + chr2_3:62039610-62039629 Msa0304680:intron 45.0%
ACCTTATCGAAGCCTCTGAT+GGG + chr2_3:62039823-62039842 Msa0304680:intron 45.0%
ACGACGCACATGGGAAATAA+AGG - chr2_3:62040086-62040105 None:intergenic 45.0%
CAATCAACAACGACGCACAT+GGG - chr2_3:62040095-62040114 None:intergenic 45.0%
ACAATCAACAACGACGCACA+TGG - chr2_3:62040096-62040115 None:intergenic 45.0%
GAGACAGTTGGATTCGGAAA+AGG + chr2_3:62040177-62040196 Msa0304680:CDS 45.0%
TTACTGTGCCCATTTGGCAT+CGG + chr2_3:62040308-62040327 Msa0304680:CDS 45.0%
CCAATTAAGGTTGCCCCAAT+AGG - chr2_3:62040363-62040382 None:intergenic 45.0%
CCTATTGGGGCAACCTTAAT+TGG + chr2_3:62040360-62040379 Msa0304680:CDS 45.0%
TTGGGGCAACCTTAATTGGA+AGG + chr2_3:62040364-62040383 Msa0304680:CDS 45.0%
TGGGGCAACCTTAATTGGAA+GGG + chr2_3:62040365-62040384 Msa0304680:CDS 45.0%
! CATTCCTGTTGAGGAGGTAT+TGG + chr2_3:62040392-62040411 Msa0304680:CDS 45.0%
TGGGTGGTGAGGAAATAGAT+AGG + chr2_3:62040412-62040431 Msa0304680:CDS 45.0%
GTGGTGAGGAAATAGATAGG+TGG + chr2_3:62040415-62040434 Msa0304680:CDS 45.0%
GTCCCCAATATACAACTTGC+AGG + chr2_3:62040645-62040664 Msa0304680:CDS 45.0%
CCCAATATACAACTTGCAGG+AGG + chr2_3:62040648-62040667 Msa0304680:CDS 45.0%
CTTACCAGCCTCATAGATGT+TGG + chr2_3:62040676-62040695 Msa0304680:CDS 45.0%
ACATCCTCCCAACATCTATG+AGG - chr2_3:62040687-62040706 None:intergenic 45.0%
GAAACTGAGGAATTCTTCCG+AGG + chr2_3:62040942-62040961 Msa0304680:CDS 45.0%
ACAATGCTTCCACCATCATC+CGG - chr2_3:62041002-62041021 None:intergenic 45.0%
CAGTGAGTTGCCAAATGAAG+TGG + chr2_3:62041079-62041098 Msa0304680:CDS 45.0%
ATATCATGCCAAGGTTCCCT+AGG - chr2_3:62041266-62041285 None:intergenic 45.0%
CTTGAGTGGATATCATGCCA+AGG - chr2_3:62041275-62041294 None:intergenic 45.0%
CTTGGCATGATATCCACTCA+AGG + chr2_3:62041273-62041292 Msa0304680:CDS 45.0%
GATATCCACTCAAGGCTTGA+AGG + chr2_3:62041281-62041300 Msa0304680:CDS 45.0%
TACTGGGGATGGGGTAATAA+TGG - chr2_3:62041402-62041421 None:intergenic 45.0%
TCCACGTCTCTTGATCATCA+GGG - chr2_3:62041430-62041449 None:intergenic 45.0%
TTCCACGTCTCTTGATCATC+AGG - chr2_3:62041431-62041450 None:intergenic 45.0%
CTGAAGATGCTGCTAAAGCT+GGG + chr2_3:62041507-62041526 Msa0304680:CDS 45.0%
GCTAAAGCTGGGCTTATTAG+TGG + chr2_3:62041518-62041537 Msa0304680:CDS 45.0%
! TGCAAAGCACCAATGTCTTC+AGG - chr2_3:62041677-62041696 None:intergenic 45.0%
TGTATGTTGTGGTTCCCATG+TGG + chr2_3:62041762-62041781 Msa0304680:CDS 45.0%
CCTGAACTGATGCACTTTCT+GGG - chr2_3:62041799-62041818 None:intergenic 45.0%
AGGCAATATTAGACTGGCAG+AGG + chr2_3:62041816-62041835 Msa0304680:CDS 45.0%
CAATATTAGACTGGCAGAGG+AGG + chr2_3:62041819-62041838 Msa0304680:CDS 45.0%
ACTCAATGCCAAGGGAATTG+AGG + chr2_3:62041877-62041896 Msa0304680:CDS 45.0%
AGGATCTTCCTCAATTCCCT+TGG - chr2_3:62041888-62041907 None:intergenic 45.0%
AGGGAATTGAGGAAGATCCT+CGG + chr2_3:62041888-62041907 Msa0304680:CDS 45.0%
! GAATCAGGTTCTGGTCTTTC+AGG - chr2_3:62041977-62041996 None:intergenic 45.0%
GATGGTAGGAGTTCATAGTG+TGG + chr2_3:62042485-62042504 Msa0304680:intron 45.0%
AGGTTTCTTGAAGCATGCCA+AGG - chr2_3:62042704-62042723 None:intergenic 45.0%
TTCACTTTCTGGGTGAAGGA+AGG - chr2_3:62042724-62042743 None:intergenic 45.0%
TGAATTCTTCCCTGACACCA+AGG + chr2_3:62042890-62042909 Msa0304680:CDS 45.0%
AAGTAGTAAGTATGGGTGGG+AGG - chr2_3:62042944-62042963 None:intergenic 45.0%
GGTGTGAGCAATGACTGTAA+TGG + chr2_3:62043010-62043029 Msa0304680:three_prime_UTR 45.0%
!! TGAAGCACTGACACAGACAC+CGG + chr2_3:62039048-62039067 Msa0304680:intron 50.0%
CACCTTATCGAAGCCTCTGA+TGG + chr2_3:62039822-62039841 Msa0304680:intron 50.0%
TCCCATCAGAGGCTTCGATA+AGG - chr2_3:62039827-62039846 None:intergenic 50.0%
! TAGAGAAAGCACGAGTGGGA+AGG + chr2_3:62040229-62040248 Msa0304680:CDS 50.0%
! AAGGGCGTACATTCCTGTTG+AGG + chr2_3:62040383-62040402 Msa0304680:CDS 50.0%
TAATGCCTAGAGCCCAGTTG+CGG - chr2_3:62040527-62040546 None:intergenic 50.0%
CCTCCTTGAATCCCTTACCA+AGG - chr2_3:62040778-62040797 None:intergenic 50.0%
CCTTGGTAAGGGATTCAAGG+AGG + chr2_3:62040775-62040794 Msa0304680:CDS 50.0%
TGTCTTATGCCCTCGCAATC+CGG + chr2_3:62040980-62040999 Msa0304680:CDS 50.0%
!! GGAGGCATTGATCTCTGTGA+TGG + chr2_3:62041134-62041153 Msa0304680:CDS 50.0%
GATGTGCTGTGTCCAGAGTT+CGG - chr2_3:62041190-62041209 None:intergenic 50.0%
GCTTGAAGGTCCCATTGCTT+GGG + chr2_3:62041295-62041314 Msa0304680:CDS 50.0%
ATGGAGGAAGCAAGGTGGAA+AGG + chr2_3:62041343-62041362 Msa0304680:CDS 50.0%
GCATCTTCAAGCTCTCTCAG+AGG - chr2_3:62041380-62041399 None:intergenic 50.0%
AGGGAAAGTTACTGGGGATG+GGG - chr2_3:62041411-62041430 None:intergenic 50.0%
CAGGGAAAGTTACTGGGGAT+GGG - chr2_3:62041412-62041431 None:intergenic 50.0%
TCAGGGAAAGTTACTGGGGA+TGG - chr2_3:62041413-62041432 None:intergenic 50.0%
TCCCTGATGATCAAGAGACG+TGG + chr2_3:62041426-62041445 Msa0304680:CDS 50.0%
ATTGACGGTGGAGCAGCTTT+CGG + chr2_3:62041470-62041489 Msa0304680:CDS 50.0%
AGCAGCATCTTCAGGAGTCT+CGG - chr2_3:62041501-62041520 None:intergenic 50.0%
! CCAGCTTTAGCAGCATCTTC+AGG - chr2_3:62041509-62041528 None:intergenic 50.0%
CCTGAAGATGCTGCTAAAGC+TGG + chr2_3:62041506-62041525 Msa0304680:CDS 50.0%
AGCTGGGCTTATTAGTGGGA+AGG + chr2_3:62041523-62041542 Msa0304680:CDS 50.0%
TCCTTGGAAGTTGCTATGCG+TGG + chr2_3:62041633-62041652 Msa0304680:CDS 50.0%
TCCACGCATAGCAACTTCCA+AGG - chr2_3:62041637-62041656 None:intergenic 50.0%
GCAAGATTGAAGCTGGGGAA+AGG + chr2_3:62041732-62041751 Msa0304680:CDS 50.0%
! CCCAGAAAGTGCATCAGTTC+AGG + chr2_3:62041796-62041815 Msa0304680:CDS 50.0%
GCCTGAACTGATGCACTTTC+TGG - chr2_3:62041800-62041819 None:intergenic 50.0%
TTACCACCTCACGATTGCCA+AGG - chr2_3:62041934-62041953 None:intergenic 50.0%
! TCAGGTTCTGGTCTTTCAGG+AGG - chr2_3:62041974-62041993 None:intergenic 50.0%
TAGCTAATAGGCAGCCTGCA+AGG + chr2_3:62042637-62042656 Msa0304680:CDS 50.0%
AGCTAATAGGCAGCCTGCAA+GGG + chr2_3:62042638-62042657 Msa0304680:CDS 50.0%
ATGGTTTCCGCATGTCGTTG+TGG + chr2_3:62042670-62042689 Msa0304680:CDS 50.0%
GCTCATACCACAACGACATG+CGG - chr2_3:62042680-62042699 None:intergenic 50.0%
TCGTTGTGGTATGAGCACCT+TGG + chr2_3:62042684-62042703 Msa0304680:CDS 50.0%
ACTCTTGAGCATGATCTCCC+TGG + chr2_3:62042804-62042823 Msa0304680:CDS 50.0%
ACCTTCTCCGCTATCCCATT+GGG + chr2_3:62042829-62042848 Msa0304680:CDS 50.0%
TGGAAACCCCAATGGGATAG+CGG - chr2_3:62042839-62042858 None:intergenic 50.0%
CCTTCACTGGAAACCCCAAT+GGG - chr2_3:62042846-62042865 None:intergenic 50.0%
TCCTTCACTGGAAACCCCAA+TGG - chr2_3:62042847-62042866 None:intergenic 50.0%
!! TGGTGGTTGGGATTGGTCCA+TGG + chr2_3:62039617-62039636 Msa0304680:intron 55.0%
GGCGTACATTCCTGTTGAGG+AGG + chr2_3:62040386-62040405 Msa0304680:CDS 55.0%
CCACCCAATACCTCCTCAAC+AGG - chr2_3:62040399-62040418 None:intergenic 55.0%
!! CCTGTTGAGGAGGTATTGGG+TGG + chr2_3:62040396-62040415 Msa0304680:CDS 55.0%
!! TGAGGAGGTATTGGGTGGTG+AGG + chr2_3:62040401-62040420 Msa0304680:CDS 55.0%
AAAGACCGCAACTGGGCTCT+AGG + chr2_3:62040519-62040538 Msa0304680:CDS 55.0%
CCTCCCAACATCTATGAGGC+TGG - chr2_3:62040683-62040702 None:intergenic 55.0%
CCAGCCTCATAGATGTTGGG+AGG + chr2_3:62040680-62040699 Msa0304680:CDS 55.0%
GATTCAAGGAGGCCAAAGCC+AGG + chr2_3:62040786-62040805 Msa0304680:CDS 55.0%
GTGATGTCTCCTCCTGGCTT+TGG - chr2_3:62040801-62040820 None:intergenic 55.0%
CCAAGTGTGATGTCTCCTCC+TGG - chr2_3:62040807-62040826 None:intergenic 55.0%
CCAGGAGGAGACATCACACT+TGG + chr2_3:62040804-62040823 Msa0304680:CDS 55.0%
CACAGTGCACTTCAGAGCCT+CGG - chr2_3:62040962-62040981 None:intergenic 55.0%
CACCATCATCCGGATTGCGA+GGG - chr2_3:62040992-62041011 None:intergenic 55.0%
AAGGTGGTCCTAGGGAACCT+TGG + chr2_3:62041255-62041274 Msa0304680:CDS 55.0%
TGGGACCTTCAAGCCTTGAG+TGG - chr2_3:62041289-62041308 None:intergenic 55.0%
GGCTTGAAGGTCCCATTGCT+TGG + chr2_3:62041294-62041313 Msa0304680:CDS 55.0%
GAGCAGAGATGGAGGAAGCA+AGG + chr2_3:62041335-62041354 Msa0304680:CDS 55.0%
CAGAGATGGAGGAAGCAAGG+TGG + chr2_3:62041338-62041357 Msa0304680:CDS 55.0%
TTGACGGTGGAGCAGCTTTC+GGG + chr2_3:62041471-62041490 Msa0304680:CDS 55.0%
CAGCATCTTCAGGAGTCTCG+GGG - chr2_3:62041499-62041518 None:intergenic 55.0%
GCAGCATCTTCAGGAGTCTC+GGG - chr2_3:62041500-62041519 None:intergenic 55.0%
!! TGCTATGCGTGGAGTGCTGA+TGG + chr2_3:62041644-62041663 Msa0304680:CDS 55.0%
AGACTGGCAGAGGAGGACAA+TGG + chr2_3:62041826-62041845 Msa0304680:CDS 55.0%
CTTCTGCCTTGGCAATCGTG+AGG + chr2_3:62041925-62041944 Msa0304680:CDS 55.0%
ATATGCGAGCTCAAGAGGCC+AGG + chr2_3:62042002-62042021 Msa0304680:CDS 55.0%
GCTAATAGGCAGCCTGCAAG+GGG + chr2_3:62042639-62042658 Msa0304680:CDS 55.0%
CCATGAATCTGACCCCTTGC+AGG - chr2_3:62042654-62042673 None:intergenic 55.0%
CCTGCAAGGGGTCAGATTCA+TGG + chr2_3:62042651-62042670 Msa0304680:CDS 55.0%
!! CAATGGGATAGCGGAGAAGG+TGG - chr2_3:62042830-62042849 None:intergenic 55.0%
CACCTTCTCCGCTATCCCAT+TGG + chr2_3:62042828-62042847 Msa0304680:CDS 55.0%
CCTTCTCCGCTATCCCATTG+GGG + chr2_3:62042830-62042849 Msa0304680:CDS 55.0%
CCCATTGGGGTTTCCAGTGA+AGG + chr2_3:62042843-62042862 Msa0304680:CDS 55.0%
CTCTGTCACGCTTCCTTCAC+TGG - chr2_3:62042859-62042878 None:intergenic 55.0%
!! GAACACGAGCCTTGGTGTCA+GGG - chr2_3:62042902-62042921 None:intergenic 55.0%
!! AGAACACGAGCCTTGGTGTC+AGG - chr2_3:62042903-62042922 None:intergenic 55.0%
GACACCAAGGCTCGTGTTCT+TGG + chr2_3:62042903-62042922 Msa0304680:CDS 55.0%
ACCAAGGCTCGTGTTCTTGG+CGG + chr2_3:62042906-62042925 Msa0304680:CDS 55.0%
! GCACTGACACAGACACCGGA+CGG + chr2_3:62039052-62039071 Msa0304680:intron 60.0%
TGACACAGACACCGGACGGA+TGG + chr2_3:62039056-62039075 Msa0304680:intron 60.0%
TGCTGACGTGTCCATCCGTC+CGG - chr2_3:62039070-62039089 None:intergenic 60.0%
TCAAGGAGGCCAAAGCCAGG+AGG + chr2_3:62040789-62040808 Msa0304680:CDS 60.0%
TGCCCTCGCAATCCGGATGA+TGG + chr2_3:62040987-62041006 Msa0304680:CDS 60.0%
CCACCATCATCCGGATTGCG+AGG - chr2_3:62040993-62041012 None:intergenic 60.0%
! CCTCGCAATCCGGATGATGG+TGG + chr2_3:62040990-62041009 Msa0304680:CDS 60.0%
TGTGGTTCCCATGTGGCCTG+AGG + chr2_3:62041769-62041788 Msa0304680:CDS 60.0%
GTGGTTCCCATGTGGCCTGA+GGG + chr2_3:62041770-62041789 Msa0304680:CDS 60.0%
!! GCACTTTCTGGGACACCCTC+AGG - chr2_3:62041788-62041807 None:intergenic 60.0%
CTGCCTTGGCAATCGTGAGG+TGG + chr2_3:62041928-62041947 Msa0304680:CDS 60.0%
!! GATAGCGGAGAAGGTGGCCA+GGG - chr2_3:62042824-62042843 None:intergenic 60.0%
!! CCCCAATGGGATAGCGGAGA+AGG - chr2_3:62042833-62042852 None:intergenic 60.0%
TCCGCCAAGAACACGAGCCT+TGG - chr2_3:62042910-62042929 None:intergenic 60.0%
GGGACACCCTCAGGCCACAT+GGG - chr2_3:62041779-62041798 None:intergenic 65.0%
TGGGACACCCTCAGGCCACA+TGG - chr2_3:62041780-62041799 None:intergenic 65.0%
!! GGATAGCGGAGAAGGTGGCC+AGG - chr2_3:62042825-62042844 None:intergenic 65.0%
! GGAAGCGTGACAGAGCTGCC+AGG + chr2_3:62042864-62042883 Msa0304680:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 62038546 62043266 62038546 ID=Msa0304680;Name=Msa0304680
chr2_3 mRNA 62038546 62043266 62038546 ID=Msa0304680-mRNA-1;Parent=Msa0304680;Name=Msa0304680-mRNA-1;_AED=0.16;_eAED=0.16;_QI=177|1|1|1|0.66|0.5|4|301|809
chr2_3 exon 62038546 62038715 62038546 ID=Msa0304680-mRNA-1:exon:20636;Parent=Msa0304680-mRNA-1
chr2_3 exon 62038823 62038922 62038823 ID=Msa0304680-mRNA-1:exon:20637;Parent=Msa0304680-mRNA-1
chr2_3 exon 62040159 62042061 62040159 ID=Msa0304680-mRNA-1:exon:20638;Parent=Msa0304680-mRNA-1
chr2_3 exon 62042532 62043266 62042532 ID=Msa0304680-mRNA-1:exon:20639;Parent=Msa0304680-mRNA-1
chr2_3 five_prime_UTR 62038546 62038715 62038546 ID=Msa0304680-mRNA-1:five_prime_utr;Parent=Msa0304680-mRNA-1
chr2_3 five_prime_UTR 62038823 62038829 62038823 ID=Msa0304680-mRNA-1:five_prime_utr;Parent=Msa0304680-mRNA-1
chr2_3 CDS 62038830 62038922 62038830 ID=Msa0304680-mRNA-1:cds;Parent=Msa0304680-mRNA-1
chr2_3 CDS 62040159 62042061 62040159 ID=Msa0304680-mRNA-1:cds;Parent=Msa0304680-mRNA-1
chr2_3 CDS 62042532 62042965 62042532 ID=Msa0304680-mRNA-1:cds;Parent=Msa0304680-mRNA-1
chr2_3 three_prime_UTR 62042966 62043266 62042966 ID=Msa0304680-mRNA-1:three_prime_utr;Parent=Msa0304680-mRNA-1
Gene Sequence

>Msa0304680

ATGGCGCAAATTCTGCTACATGGAACTCTTCATGCTACAATCTTTGAGGTCGATAAACTCAAGAATATTAGTGGTGGTAACATTCTTTCCAAGATAAGACAAAACTTTGAGGAGACAGTTGGATTCGGAAAAGGAACTACCAAACTTTATGCAACCATTGATTTAGAGAAAGCACGAGTGGGAAGGACCAGAATCATAGAAAAGGAGCATGTTAATCCTCAATGGAATGAGTCTTTTCACATTTACTGTGCCCATTTGGCATCGGATATCATATTCACTGTGAAAGATGATAATCCTATTGGGGCAACCTTAATTGGAAGGGCGTACATTCCTGTTGAGGAGGTATTGGGTGGTGAGGAAATAGATAGGTGGGTTGAAATATTGGATGTGAATAAAGAACCAATTCATGGAAATTCAAAGATCCATGTGAAGCTGCAATTTTTTGATGTTTCAAAAGACCGCAACTGGGCTCTAGGCATTAGAAGTCCTAAATTTCCTGGAGTTCCTTATGCTTTCTACACACAAAGACAAGGTTGTAAGGTTTCTCTGTACCAAGATTCTCATATCCCAGACAATTTTGTCCCCAATATACAACTTGCAGGAGGTCAGACTTACCAGCCTCATAGATGTTGGGAGGATGTTTTTGATGCAATCACAAAAGCAAGGCACTTAATATACATTACAGGGTGGTCTGTTTATACTGAGATTTCCTTGGTAAGGGATTCAAGGAGGCCAAAGCCAGGAGGAGACATCACACTTGGTGAGCTTCTCAAGAAAAAAGCACAAGAAGGTGTTAGGGTATTAATGCTTGTTTGGGATGATAGAACGTCGGTTCCTCTGTTAAAAAAAGATGGGTTGATGGCTACTCATGATCAAGAAACTGAGGAATTCTTCCGAGGCTCTGAAGTGCACTGTGTCTTATGCCCTCGCAATCCGGATGATGGTGGAAGCATTGTCCAGAATATAGAAATTGGCACCATGTTTACTCATCATCAGAAAATTTTGGTGGTGGACAGTGAGTTGCCAAATGAAGTGGGATTAAATAAACGAAGAATTGTGAGTTTTGTAGGAGGCATTGATCTCTGTGATGGAAGATATGATACCCCGTTTCATTCACTTTTCCGAACTCTGGACACAGCACATCATGATGACTTTCATCAGCCTAACTTTCCTGGTGCTTCAATAGAAAAAGGTGGTCCTAGGGAACCTTGGCATGATATCCACTCAAGGCTTGAAGGTCCCATTGCTTGGGATGTTTTGTTTAACTTTGAGCAGAGATGGAGGAAGCAAGGTGGAAAGGACTTGCTTGTTCCTCTGAGAGAGCTTGAAGATGCCATTATTACCCCATCCCCAGTAACTTTCCCTGATGATCAAGAGACGTGGAATGTTCAGCTATTTAGATCTATTGACGGTGGAGCAGCTTTCGGGTTCCCCGAGACTCCTGAAGATGCTGCTAAAGCTGGGCTTATTAGTGGGAAGGATAACATAATAGATAGGAGTATTCAAGATGCTTATATCAATGCTATTCGACGCGCAAAGAATTTCATCTACATTGAAAATCAATATTTCCTTGGAAGTTGCTATGCGTGGAGTGCTGATGGTATTAAGCCTGAAGACATTGGTGCTTTGCATCTGATCCCAAAAGAGCTTTCACTTAAGATTGTTAGCAAGATTGAAGCTGGGGAAAGGTTCACTGTGTATGTTGTGGTTCCCATGTGGCCTGAGGGTGTCCCAGAAAGTGCATCAGTTCAGGCAATATTAGACTGGCAGAGGAGGACAATGGATATGATGTACAAAGATATTATTGAAGCACTCAATGCCAAGGGAATTGAGGAAGATCCTCGGAACTATTTGACATTCTTCTGCCTTGGCAATCGTGAGGTGGTAAAACAAGGAGAGTACGAGCCTCCTGAAAGACCAGAACCTGATTCAGATTATATGCGAGCTCAAGAGGCCAGGCGTTTCATGATTTATGTTCATGCCAAGATGATGATAGTTGATGATGAATACATAATCGTCGGATCTGCCAACATCAACCAAAGATCAATGGATGGTGCTAGAGACTCTGAAATTGCAATGGGAGCTTATCAACCCTATCATTTAGCTAATAGGCAGCCTGCAAGGGGTCAGATTCATGGTTTCCGCATGTCGTTGTGGTATGAGCACCTTGGCATGCTTCAAGAAACCTTCCTTCACCCAGAAAGTGAAGAATGCATTAGGAAGGTGAACCAGATTGCTGACAAATATTGGGATCTCTATTCTAGCGAGACTCTTGAGCATGATCTCCCTGGCCACCTTCTCCGCTATCCCATTGGGGTTTCCAGTGAAGGAAGCGTGACAGAGCTGCCAGGATTTGAATTCTTCCCTGACACCAAGGCTCGTGTTCTTGGCGGAAAAGTTGATTACCTCCCACCCATACTTACTACTTAG
Protein sequence

>Msa0304680

MAQILLHGTLHATIFEVDKLKNISGGNILSKIRQNFEETVGFGKGTTKLYATIDLEKARVGRTRIIEKEHVNPQWNESFHIYCAHLASDIIFTVKDDNPIGATLIGRAYIPVEEVLGGEEIDRWVEILDVNKEPIHGNSKIHVKLQFFDVSKDRNWALGIRSPKFPGVPYAFYTQRQGCKVSLYQDSHIPDNFVPNIQLAGGQTYQPHRCWEDVFDAITKARHLIYITGWSVYTEISLVRDSRRPKPGGDITLGELLKKKAQEGVRVLMLVWDDRTSVPLLKKDGLMATHDQETEEFFRGSEVHCVLCPRNPDDGGSIVQNIEIGTMFTHHQKILVVDSELPNEVGLNKRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGASIEKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLVPLRELEDAIITPSPVTFPDDQETWNVQLFRSIDGGAAFGFPETPEDAAKAGLISGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCYAWSADGIKPEDIGALHLIPKELSLKIVSKIEAGERFTVYVVVPMWPEGVPESASVQAILDWQRRTMDMMYKDIIEALNAKGIEEDPRNYLTFFCLGNREVVKQGEYEPPERPEPDSDYMRAQEARRFMIYVHAKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLANRQPARGQIHGFRMSLWYEHLGMLQETFLHPESEECIRKVNQIADKYWDLYSSETLEHDLPGHLLRYPIGVSSEGSVTELPGFEFFPDTKARVLGGKVDYLPPILTT*