Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121470 | MCI11558.1 | 66.162 | 198 | 63 | 2 | 137 | 334 | 1 | 194 | 1.83e-81 | 259 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121470 | A0A392PHL9 | 66.162 | 198 | 63 | 2 | 137 | 334 | 1 | 194 | 8.74e-82 | 259 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1121470 | Msa1156360 | 0.839212 | 1.813990e-57 | -8.615850e-47 |
| Msa1121470 | Msa1208750 | -0.802775 | 4.779617e-49 | -8.615850e-47 |
| Msa0544780 | Msa1121470 | -0.807101 | 5.957899e-50 | -8.615850e-47 |
| Msa0545350 | Msa1121470 | -0.809825 | 1.562123e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1121470 | MtrunA17_Chr7g0250141 | 32.258 | 248 | 129 | 9 | 105 | 328 | 88 | 320 | 1.63e-19 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 128 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTCAACCATTGTCTTTCT+TGG | 0.215242 | 7_3:+71524751 | Msa1121470:CDS |
| CGTGGAACCTTTCGAGTATC+TGG | 0.232195 | 7_3:+71524368 | Msa1121470:CDS |
| CATTTACAATCCATCTGTTT+AGG | 0.232337 | 7_3:+71523513 | Msa1121470:CDS |
| TTCCAAGGAATGATGTAAAA+TGG | 0.236038 | 7_3:-71525899 | None:intergenic |
| AGTGATTTCCAGTGTGGTTT+TGG | 0.260198 | 7_3:+71524493 | Msa1121470:CDS |
| TTCCAGGGAATGCTGTAAAA+TGG | 0.261175 | 7_3:-71524531 | None:intergenic |
| AATTTCAAAGCAACACTTAC+AGG | 0.308807 | 7_3:-71523214 | None:intergenic |
| GACAATCGAATAAGCATTAC+AGG | 0.311358 | 7_3:+71524583 | Msa1121470:CDS |
| TCCATGGGGTGGTATTGTTT+TGG | 0.317688 | 7_3:+71525042 | Msa1121470:CDS |
| GTGAAGCAATTGAGCATTAC+AGG | 0.325105 | 7_3:+71525951 | Msa1121470:CDS |
| ATTTACAATCCATCTGTTTA+GGG | 0.327573 | 7_3:+71523514 | Msa1121470:CDS |
| AAAGATTAGCTCAATATATA+AGG | 0.338961 | 7_3:+71524257 | Msa1121470:CDS |
| GGGGAGGATGTGTTTACATT+TGG | 0.350400 | 7_3:+71523266 | Msa1121470:CDS |
| TTTATTCATATCACTTCATT+TGG | 0.350430 | 7_3:-71525078 | None:intergenic |
| TCTGTATGGTTGTCCTTGCT+TGG | 0.351401 | 7_3:+71524853 | Msa1121470:CDS |
| TTGGTATTTCCTACAACATA+TGG | 0.355189 | 7_3:+71524770 | Msa1121470:CDS |
| AGAAAACTGAAATACAGTTT+TGG | 0.363010 | 7_3:+71524296 | Msa1121470:CDS |
| GGGATTGGAAGCCTACTTCC+AGG | 0.368435 | 7_3:-71524547 | None:intergenic |
| TCATGTGTTGCTATTGGCTT+TGG | 0.373768 | 7_3:+71526005 | Msa1121470:CDS |
| TAATCTCAGGCTTCCTTTGA+AGG | 0.377343 | 7_3:-71523307 | None:intergenic |
| AGGAATGATGTAAAATGGTT+TGG | 0.382856 | 7_3:-71525894 | None:intergenic |
| CATATGATGCTGAAAGCAAC+CGG | 0.390552 | 7_3:+71523245 | Msa1121470:exon |
| TGCTGAAACTCTGGGTCTCT+TGG | 0.391348 | 7_3:-71526075 | None:intergenic |
| GTATAGCCATGCTGAAACTC+TGG | 0.393632 | 7_3:-71526084 | None:intergenic |
| ACGTAGGAAGTGGGTTAAAC+GGG | 0.393758 | 7_3:-71524194 | None:intergenic |
| CTTCTTCAGTCCCACAGAAA+TGG | 0.398558 | 7_3:-71525844 | None:intergenic |
| CTGGTTGTTCCATATGTTGT+AGG | 0.398848 | 7_3:-71524779 | None:intergenic |
| AATGAATCATGTGTTGCTAT+TGG | 0.399170 | 7_3:+71525999 | Msa1121470:CDS |
| CTGTATGGTTGTCCTTGCTT+GGG | 0.401241 | 7_3:+71524854 | Msa1121470:CDS |
| ATTCATATCACTTCATTTGG+TGG | 0.403378 | 7_3:-71525075 | None:intergenic |
| ATTAGTCGGTGGACTTTCCA+TGG | 0.405853 | 7_3:+71525026 | Msa1121470:CDS |
| CGGCGGATAATCTTCATTGT+AGG | 0.415373 | 7_3:-71523354 | None:intergenic |
| CATGATGAAACGGCAGATGC+TGG | 0.415558 | 7_3:-71522593 | None:intergenic |
| TGTTTGTGCCGTTGTTGTAA+TGG | 0.416873 | 7_3:+71524897 | Msa1121470:CDS |
| TGATTGAAGATGCATCAAAA+TGG | 0.426211 | 7_3:-71524974 | None:intergenic |
| TCTTTCATTGCCCAAGGGAT+TGG | 0.428984 | 7_3:-71524562 | None:intergenic |
| CATATTCTCCCTCGGAAAAC+CGG | 0.429075 | 7_3:+71523540 | Msa1121470:CDS |
| CACGTAGGAAGTGGGTTAAA+CGG | 0.433653 | 7_3:-71524195 | None:intergenic |
| AGGAAACAGGTCCTCTCAGC+TGG | 0.445630 | 7_3:+71525971 | Msa1121470:CDS |
| AATTGAGCATTACAGGAAAC+AGG | 0.453066 | 7_3:+71525958 | Msa1121470:CDS |
| GTATAGTCATGCTGAAACTC+GGG | 0.454877 | 7_3:-71524670 | None:intergenic |
| CTTTCTTCAAACAAGTACTT+AGG | 0.458773 | 7_3:-71525929 | None:intergenic |
| GCGAGTTTGATGAGAAGAAT+GGG | 0.460849 | 7_3:+71524218 | Msa1121470:CDS |
| TTGGCCGCGCAAAATGACTT+TGG | 0.462932 | 7_3:+71526029 | Msa1121470:CDS |
| TCACTAGAGTTAATTAAAGA+AGG | 0.465168 | 7_3:+71522740 | Msa1121470:five_prime_UTR |
| GAAGTAGGCTTCCAATCCCT+TGG | 0.467360 | 7_3:+71524551 | Msa1121470:CDS |
| TTCTGTTCTTTGTGAAGTGG+TGG | 0.468958 | 7_3:-71524820 | None:intergenic |
| TGTTGCTATTGGCTTTGGTT+TGG | 0.470619 | 7_3:+71526010 | Msa1121470:CDS |
| TTACATCATTCCTTGGAAGT+AGG | 0.471453 | 7_3:+71525904 | Msa1121470:CDS |
| TTGTCCTTGCTTGGGTTGTT+CGG | 0.471822 | 7_3:+71524862 | Msa1121470:CDS |
| GGACATGGATAATTGATAAC+TGG | 0.472190 | 7_3:-71524798 | None:intergenic |
| AAAGGAAGCCTGAGATTACA+AGG | 0.475383 | 7_3:+71523312 | Msa1121470:CDS |
| AGAATGGCCGCCTTTCTGTA+TGG | 0.479788 | 7_3:+71524839 | Msa1121470:CDS |
| CAGTCCCACAGAAATGGAAA+TGG | 0.480933 | 7_3:-71525838 | None:intergenic |
| TTGTAGGGAAAACTGTCATC+AGG | 0.481762 | 7_3:-71523338 | None:intergenic |
| GCAGCTCATTGTCATCCAGC+TGG | 0.484808 | 7_3:-71524618 | None:intergenic |
| TTCACCATTTCCATTTCTGT+GGG | 0.486409 | 7_3:+71525834 | Msa1121470:CDS |
| GAAAACCGGTTGGACATTCA+AGG | 0.487357 | 7_3:+71523554 | Msa1121470:CDS |
| AATGATGTAAAATGGTTTGG+AGG | 0.488922 | 7_3:-71525891 | None:intergenic |
| AGGAAACATGTTCACCCAGC+TGG | 0.490868 | 7_3:+71524603 | Msa1121470:CDS |
| GTTGTTGTAATGGTTCTTGT+TGG | 0.491850 | 7_3:+71524907 | Msa1121470:CDS |
| TTACAGCATTCCCTGGAAGT+AGG | 0.494539 | 7_3:+71524536 | Msa1121470:CDS |
| GGCGAGTTTGATGAGAAGAA+TGG | 0.497291 | 7_3:+71524217 | Msa1121470:CDS |
| TCAGGAAACCTTGTAATCTC+AGG | 0.510173 | 7_3:-71523320 | None:intergenic |
| GGTATAGTCATGCTGAAACT+CGG | 0.510737 | 7_3:-71524671 | None:intergenic |
| CGATTGTCTTTCATTGCCCA+AGG | 0.511834 | 7_3:-71524568 | None:intergenic |
| CAAACTCGCCACGTAGGAAG+TGG | 0.513573 | 7_3:-71524204 | None:intergenic |
| GGCGGATAATCTTCATTGTA+GGG | 0.514262 | 7_3:-71523353 | None:intergenic |
| CCATTCTGTTCTTTGTGAAG+TGG | 0.517477 | 7_3:-71524823 | None:intergenic |
| TTAGTCGGTGGACTTTCCAT+GGG | 0.518986 | 7_3:+71525027 | Msa1121470:CDS |
| CATGGAGAAACATGATGAAA+CGG | 0.519377 | 7_3:-71522603 | None:intergenic |
| ACTCACCTTGAATGTCCAAC+CGG | 0.528662 | 7_3:-71523559 | None:intergenic |
| GTTCACCATTTCCATTTCTG+TGG | 0.533327 | 7_3:+71525833 | Msa1121470:intron |
| CTGTTTCACGTATCCTTCAA+AGG | 0.534026 | 7_3:+71523294 | Msa1121470:CDS |
| TGGATGACAATGAGCTGCAT+TGG | 0.535155 | 7_3:+71524623 | Msa1121470:CDS |
| ATGATGAAACGGCAGATGCT+GGG | 0.536649 | 7_3:-71522592 | None:intergenic |
| CTTTGTGAAGTGGTGGGACA+TGG | 0.539680 | 7_3:-71524813 | None:intergenic |
| AATGCTGTAAAATGGTTTCG+TGG | 0.540864 | 7_3:-71524523 | None:intergenic |
| AAGTAGGCTTCCAATCCCTT+GGG | 0.548575 | 7_3:+71524552 | Msa1121470:CDS |
| TAGGGCCACATATTCTCCCT+CGG | 0.560976 | 7_3:+71523532 | Msa1121470:CDS |
| CACTAGAGTTAATTAAAGAA+GGG | 0.561879 | 7_3:+71522741 | Msa1121470:five_prime_UTR |
| CAGATACTCGAAAGGTTCCA+CGG | 0.563159 | 7_3:-71524367 | None:intergenic |
| TTCTCCCTCGGAAAACCGGT+TGG | 0.567101 | 7_3:+71523544 | Msa1121470:CDS |
| ATTTCAAAGCAACACTTACA+GGG | 0.567893 | 7_3:-71523213 | None:intergenic |
| TCCAAAACAATACCACCCCA+TGG | 0.569459 | 7_3:-71525043 | None:intergenic |
| GTGGAACCTTTCGAGTATCT+GGG | 0.569477 | 7_3:+71524369 | Msa1121470:CDS |
| TCTGTTCTTTGTGAAGTGGT+GGG | 0.571937 | 7_3:-71524819 | None:intergenic |
| TCGGTGGACTTTCCATGGGG+TGG | 0.573751 | 7_3:+71525031 | Msa1121470:CDS |
| ATATGATGCTGAAAGCAACC+GGG | 0.575953 | 7_3:+71523246 | Msa1121470:exon |
| GCTTTCTGTATGCTAGTGAA+TGG | 0.576859 | 7_3:-71524934 | None:intergenic |
| TACTTAGGATCCTACTTCCA+AGG | 0.578920 | 7_3:-71525914 | None:intergenic |
| ATGCTGTAAAATGGTTTCGT+GGG | 0.580160 | 7_3:-71524522 | None:intergenic |
| AATATGTGGCCCTAAACAGA+TGG | 0.580936 | 7_3:-71523523 | None:intergenic |
| CAGCTCATTGTCATCCAGCT+GGG | 0.585157 | 7_3:-71524617 | None:intergenic |
| GGCACTTTCCAAAACCACAC+TGG | 0.587089 | 7_3:-71524501 | None:intergenic |
| AAATGTAAACACATCCTCCC+CGG | 0.588798 | 7_3:-71523264 | None:intergenic |
| GCAAGGACAACCATACAGAA+AGG | 0.593341 | 7_3:-71524849 | None:intergenic |
| GAAGTGTTCGTTACATTAGT+CGG | 0.593991 | 7_3:+71525012 | Msa1121470:CDS |
| TTACAATCAGCACATGCGTA+AGG | 0.601176 | 7_3:+71524699 | Msa1121470:CDS |
| TATAGCCATGCTGAAACTCT+GGG | 0.602687 | 7_3:-71526083 | None:intergenic |
| CTGCAGAGTGATTTCCAGTG+TGG | 0.609136 | 7_3:+71524487 | Msa1121470:intron |
| GGAAATACCAAGAAAGACAA+TGG | 0.611367 | 7_3:-71524758 | None:intergenic |
| CAAGCTGAGACAAAGAGAAG+AGG | 0.615482 | 7_3:-71522647 | None:intergenic |
| CATGTGCTGATTGTAATCGT+AGG | 0.627777 | 7_3:-71524692 | None:intergenic |
| CGTTTAACCCACTTCCTACG+TGG | 0.628864 | 7_3:+71524196 | Msa1121470:CDS |
| CCACTTCACAAAGAACAGAA+TGG | 0.629783 | 7_3:+71524823 | Msa1121470:CDS |
| CTACAATGAAGATTATCCGC+CGG | 0.630707 | 7_3:+71523355 | Msa1121470:CDS |
| GATTGTCTTTCATTGCCCAA+GGG | 0.631392 | 7_3:-71524567 | None:intergenic |
| GGATTGGAAGCCTACTTCCA+GGG | 0.634042 | 7_3:-71524546 | None:intergenic |
| GTGTTCGTTACATTAGTCGG+TGG | 0.640649 | 7_3:+71525015 | Msa1121470:CDS |
| AACAAGAACCATTACAACAA+CGG | 0.644539 | 7_3:-71524905 | None:intergenic |
| AAAACCGAACAACCCAAGCA+AGG | 0.649732 | 7_3:-71524866 | None:intergenic |
| AACTTACCCAGATACTCGAA+AGG | 0.655831 | 7_3:-71524375 | None:intergenic |
| GTCTCTGTAAAAGTTCAACA+TGG | 0.657530 | 7_3:-71522621 | None:intergenic |
| TTCATTGTTATCCAGCTGAG+AGG | 0.658661 | 7_3:-71525982 | None:intergenic |
| CGAGTTTGATGAGAAGAATG+GGG | 0.665142 | 7_3:+71524219 | Msa1121470:CDS |
| AAACTCGCCACGTAGGAAGT+GGG | 0.667000 | 7_3:-71524203 | None:intergenic |
| ATGATTCATTCACAATACAG+AGG | 0.668772 | 7_3:+71522775 | Msa1121470:five_prime_UTR |
| CGTAGGAAGTGGGTTAAACG+GGG | 0.689409 | 7_3:-71524193 | None:intergenic |
| AGAGACCCAGAGTTTCAGCA+TGG | 0.695147 | 7_3:+71526078 | Msa1121470:CDS |
| AAAAGAACAGAACAGAACAG+AGG | 0.698260 | 7_3:+71522700 | Msa1121470:five_prime_UTR |
| AGGACAACCATACAGAAAGG+CGG | 0.698524 | 7_3:-71524846 | None:intergenic |
| AAAATGTTAGGAGTCGTCCG+TGG | 0.700444 | 7_3:+71524350 | Msa1121470:CDS |
| TAGTCGGTGGACTTTCCATG+GGG | 0.703393 | 7_3:+71525028 | Msa1121470:CDS |
| TATAGTCATGCTGAAACTCG+GGG | 0.706617 | 7_3:-71524669 | None:intergenic |
| TCTCATCAAACTCGCCACGT+AGG | 0.711118 | 7_3:-71524210 | None:intergenic |
| GATGCTGAAAGCAACCGGGG+AGG | 0.714097 | 7_3:+71523250 | Msa1121470:CDS |
| TATGATGCTGAAAGCAACCG+GGG | 0.719952 | 7_3:+71523247 | Msa1121470:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAATAAAATAAAAA+TGG | - | chr7_3:71522818-71522837 | None:intergenic | 0.0% |
| !! | ATAATATTCAAATAATTGAT+AGG | + | chr7_3:71524162-71524181 | Msa1121470:intron | 10.0% |
| !! | AAAATAAAAATGGAAATTTC+TGG | - | chr7_3:71522808-71522827 | None:intergenic | 15.0% |
| !! | TTTATTTGATATATTATGTC+AGG | - | chr7_3:71522973-71522992 | None:intergenic | 15.0% |
| !!! | AAAACATTGAAAACTATTTT+AGG | - | chr7_3:71523690-71523709 | None:intergenic | 15.0% |
| !!! | TAAAATAGTTTTCAATGTTT+TGG | + | chr7_3:71523689-71523708 | Msa1121470:intron | 15.0% |
| !!! | TGATTCTAAAAACACAATTT+AGG | + | chr7_3:71522839-71522858 | Msa1121470:intron | 20.0% |
| !!! | CAATTGATTCAAAGTAAATA+TGG | - | chr7_3:71523061-71523080 | None:intergenic | 20.0% |
| !! | AAAAATAGAGGACAAAAATT+AGG | - | chr7_3:71523466-71523485 | None:intergenic | 20.0% |
| !!! | TTTTTTGATTACCATGTTAT+AGG | + | chr7_3:71523482-71523501 | Msa1121470:intron | 20.0% |
| !! | ATTAAGCTTAATTAGATGTA+GGG | - | chr7_3:71523659-71523678 | None:intergenic | 20.0% |
| !! | ATTACTTGTACCTATATAAT+TGG | - | chr7_3:71523935-71523954 | None:intergenic | 20.0% |
| !!! | TTTCCTTTTTCTTTTTAGTA+AGG | - | chr7_3:71523971-71523990 | None:intergenic | 20.0% |
| !!! | AAAGATTAGCTCAATATATA+AGG | + | chr7_3:71524257-71524276 | Msa1121470:CDS | 20.0% |
| !! | TTTATTCATATCACTTCATT+TGG | - | chr7_3:71525081-71525100 | None:intergenic | 20.0% |
| !! | TTCCATTTAATTGTTGTATT+TGG | + | chr7_3:71525266-71525285 | Msa1121470:intron | 20.0% |
| !! | TACCAAATACAACAATTAAA+TGG | - | chr7_3:71525271-71525290 | None:intergenic | 20.0% |
| !!! | TCATATCTTAAATTTCTAGT+GGG | + | chr7_3:71525630-71525649 | Msa1121470:intron | 20.0% |
| !! | AGTTTAAATGACCAAATATT+GGG | + | chr7_3:71525727-71525746 | Msa1121470:intron | 20.0% |
| ! | TCACTAGAGTTAATTAAAGA+AGG | + | chr7_3:71522740-71522759 | Msa1121470:five_prime_UTR | 25.0% |
| ! | CACTAGAGTTAATTAAAGAA+GGG | + | chr7_3:71522741-71522760 | Msa1121470:five_prime_UTR | 25.0% |
| !!! | AAGGAACAATTGTTTTTTCA+TGG | + | chr7_3:71522885-71522904 | Msa1121470:intron | 25.0% |
| ! | TGAAACAGATTATTGATATG+AGG | - | chr7_3:71523152-71523171 | None:intergenic | 25.0% |
| ! | TAGAAGAAAAACAGTTAGAA+TGG | - | chr7_3:71523400-71523419 | None:intergenic | 25.0% |
| ! | CATGGTAATCAAAAAAATAG+AGG | - | chr7_3:71523478-71523497 | None:intergenic | 25.0% |
| ! | ATTTACAATCCATCTGTTTA+GGG | + | chr7_3:71523514-71523533 | Msa1121470:CDS | 25.0% |
| ! | TTAAGCTTAATTAGATGTAG+GGG | - | chr7_3:71523658-71523677 | None:intergenic | 25.0% |
| ! | CATTAAGCTTAATTAGATGT+AGG | - | chr7_3:71523660-71523679 | None:intergenic | 25.0% |
| ! | TCACAATGAATCACAATATT+TGG | - | chr7_3:71523857-71523876 | None:intergenic | 25.0% |
| ! | TTCATTGTACTACTATTAGT+TGG | - | chr7_3:71523904-71523923 | None:intergenic | 25.0% |
| ! | AAGAAAAAGGAAAACAGAAA+AGG | + | chr7_3:71523978-71523997 | Msa1121470:intron | 25.0% |
| ! | GTAAAAACATTATCAAGCAT+CGG | - | chr7_3:71524065-71524084 | None:intergenic | 25.0% |
| !! | AGAAAACTGAAATACAGTTT+TGG | + | chr7_3:71524296-71524315 | Msa1121470:CDS | 25.0% |
| ! | TATCTTGCTACAAAAATGTT+AGG | + | chr7_3:71524338-71524357 | Msa1121470:CDS | 25.0% |
| ! | ATAACTAAGCATAGAAACTT+TGG | - | chr7_3:71525294-71525313 | None:intergenic | 25.0% |
| !!! | TGTTTTGATTCACATTCATA+TGG | + | chr7_3:71525359-71525378 | Msa1121470:intron | 25.0% |
| ! | CATATATATAATAAGCCTTG+TGG | - | chr7_3:71525417-71525436 | None:intergenic | 25.0% |
| !! | CTCATATCTTAAATTTCTAG+TGG | + | chr7_3:71525629-71525648 | Msa1121470:intron | 25.0% |
| !!! | CATATCTTAAATTTCTAGTG+GGG | + | chr7_3:71525631-71525650 | Msa1121470:intron | 25.0% |
| !! | TGGGGATTTTCAAAATTAAT+AGG | + | chr7_3:71525649-71525668 | Msa1121470:intron | 25.0% |
| ! | GAGTTTAAATGACCAAATAT+TGG | + | chr7_3:71525726-71525745 | Msa1121470:intron | 25.0% |
| ATGATTCATTCACAATACAG+AGG | + | chr7_3:71522775-71522794 | Msa1121470:five_prime_UTR | 30.0% | |
| ACAACACAAACTAAAGAGAA+TGG | - | chr7_3:71523111-71523130 | None:intergenic | 30.0% | |
| ! | CTGTTTCATCTTTTACACTT+AGG | + | chr7_3:71523164-71523183 | Msa1121470:intron | 30.0% |
| ! | TTCATCTTTTACACTTAGGA+TGG | + | chr7_3:71523168-71523187 | Msa1121470:intron | 30.0% |
| ! | TTTTACACTTAGGATGGTTT+TGG | + | chr7_3:71523174-71523193 | Msa1121470:intron | 30.0% |
| ATTTCAAAGCAACACTTACA+GGG | - | chr7_3:71523216-71523235 | None:intergenic | 30.0% | |
| AATTTCAAAGCAACACTTAC+AGG | - | chr7_3:71523217-71523236 | None:intergenic | 30.0% | |
| ACAGAGCAAATTAAGGATAA+TGG | - | chr7_3:71523426-71523445 | None:intergenic | 30.0% | |
| CAAGATAACAGAGCAAATTA+AGG | - | chr7_3:71523433-71523452 | None:intergenic | 30.0% | |
| ATGTCTTCTTACCTATAACA+TGG | - | chr7_3:71523496-71523515 | None:intergenic | 30.0% | |
| CATTTACAATCCATCTGTTT+AGG | + | chr7_3:71523513-71523532 | Msa1121470:CDS | 30.0% | |
| ACAAAACCAACAAATGGTTT+GGG | - | chr7_3:71523635-71523654 | None:intergenic | 30.0% | |
| AACAGTATATCAAATCAAGC+AGG | - | chr7_3:71523736-71523755 | None:intergenic | 30.0% | |
| TGTACGAATTTGTGAAACTT+TGG | + | chr7_3:71523760-71523779 | Msa1121470:intron | 30.0% | |
| ACTTGTACCTATATAATTGG+TGG | - | chr7_3:71523932-71523951 | None:intergenic | 30.0% | |
| AGGCCTTACTAAAAAGAAAA+AGG | + | chr7_3:71523965-71523984 | Msa1121470:intron | 30.0% | |
| !! | AACTGAAATACAGTTTTGGT+TGG | + | chr7_3:71524300-71524319 | Msa1121470:CDS | 30.0% |
| TTGGTATTTCCTACAACATA+TGG | + | chr7_3:71524770-71524789 | Msa1121470:CDS | 30.0% | |
| AACAAGAACCATTACAACAA+CGG | - | chr7_3:71524908-71524927 | None:intergenic | 30.0% | |
| ! | GAAAGCTATGCTTATCTTTT+TGG | + | chr7_3:71524951-71524970 | Msa1121470:CDS | 30.0% |
| TGATTGAAGATGCATCAAAA+TGG | - | chr7_3:71524977-71524996 | None:intergenic | 30.0% | |
| ATTCATATCACTTCATTTGG+TGG | - | chr7_3:71525078-71525097 | None:intergenic | 30.0% | |
| ACACAAACTAGAATAAACAC+TGG | - | chr7_3:71525159-71525178 | None:intergenic | 30.0% | |
| CTATGCTTAGTTATTAACTC+TGG | + | chr7_3:71525300-71525319 | Msa1121470:intron | 30.0% | |
| TGATTCACATTCATATGGAT+CGG | + | chr7_3:71525364-71525383 | Msa1121470:intron | 30.0% | |
| ! | TGATTTGTAGCATACTTCTA+AGG | - | chr7_3:71525492-71525511 | None:intergenic | 30.0% |
| AAATAATACTCCCTTGGTTA+GGG | - | chr7_3:71525518-71525537 | None:intergenic | 30.0% | |
| AAAATAATACTCCCTTGGTT+AGG | - | chr7_3:71525519-71525538 | None:intergenic | 30.0% | |
| GTCATAAAATAATACTCCCT+TGG | - | chr7_3:71525524-71525543 | None:intergenic | 30.0% | |
| ! | TCATATTTTGTCTTTGACGT+TGG | - | chr7_3:71525685-71525704 | None:intergenic | 30.0% |
| AAATGACCAAATATTGGGAT+TGG | + | chr7_3:71525732-71525751 | Msa1121470:intron | 30.0% | |
| ! | AATGATGTAAAATGGTTTGG+AGG | - | chr7_3:71525894-71525913 | None:intergenic | 30.0% |
| AGGAATGATGTAAAATGGTT+TGG | - | chr7_3:71525897-71525916 | None:intergenic | 30.0% | |
| ! | AACCATTTTACATCATTCCT+TGG | + | chr7_3:71525897-71525916 | Msa1121470:CDS | 30.0% |
| TTCCAAGGAATGATGTAAAA+TGG | - | chr7_3:71525902-71525921 | None:intergenic | 30.0% | |
| CTTTCTTCAAACAAGTACTT+AGG | - | chr7_3:71525932-71525951 | None:intergenic | 30.0% | |
| ! | AATGAATCATGTGTTGCTAT+TGG | + | chr7_3:71525999-71526018 | Msa1121470:CDS | 30.0% |
| CATGGAGAAACATGATGAAA+CGG | - | chr7_3:71522606-71522625 | None:intergenic | 35.0% | |
| GTCTCTGTAAAAGTTCAACA+TGG | - | chr7_3:71522624-71522643 | None:intergenic | 35.0% | |
| AAAAGAACAGAACAGAACAG+AGG | + | chr7_3:71522700-71522719 | Msa1121470:five_prime_UTR | 35.0% | |
| CATTCACAATACAGAGGTAA+AGG | + | chr7_3:71522781-71522800 | Msa1121470:intron | 35.0% | |
| TATTGCGTATGGAGAAAGTT+TGG | - | chr7_3:71523598-71523617 | None:intergenic | 35.0% | |
| CAAAACCAACAAATGGTTTG+GGG | - | chr7_3:71523634-71523653 | None:intergenic | 35.0% | |
| GACAAAACCAACAAATGGTT+TGG | - | chr7_3:71523636-71523655 | None:intergenic | 35.0% | |
| TATATCAAATCAAGCAGGAG+TGG | - | chr7_3:71523731-71523750 | None:intergenic | 35.0% | |
| AACACGACCACCAATTATAT+AGG | + | chr7_3:71523922-71523941 | Msa1121470:intron | 35.0% | |
| TACAAGTAATGAGCTAAGTG+AGG | + | chr7_3:71523945-71523964 | Msa1121470:intron | 35.0% | |
| ATGCTGTAAAATGGTTTCGT+GGG | - | chr7_3:71524525-71524544 | None:intergenic | 35.0% | |
| AATGCTGTAAAATGGTTTCG+TGG | - | chr7_3:71524526-71524545 | None:intergenic | 35.0% | |
| GACAATCGAATAAGCATTAC+AGG | + | chr7_3:71524583-71524602 | Msa1121470:CDS | 35.0% | |
| GGAAATACCAAGAAAGACAA+TGG | - | chr7_3:71524761-71524780 | None:intergenic | 35.0% | |
| ! | GGACATGGATAATTGATAAC+TGG | - | chr7_3:71524801-71524820 | None:intergenic | 35.0% |
| GTTGTTGTAATGGTTCTTGT+TGG | + | chr7_3:71524907-71524926 | Msa1121470:CDS | 35.0% | |
| ! | GAAGTGTTCGTTACATTAGT+CGG | + | chr7_3:71525012-71525031 | Msa1121470:CDS | 35.0% |
| TAAGCAGTACCTTATTCCAT+CGG | + | chr7_3:71525192-71525211 | Msa1121470:intron | 35.0% | |
| TTTCACGAAGATATTCCACA+AGG | + | chr7_3:71525399-71525418 | Msa1121470:intron | 35.0% | |
| AAGTTGGGAGTTAGAAGATT+TGG | - | chr7_3:71525441-71525460 | None:intergenic | 35.0% | |
| ! | TGTAGCATACTTCTAAGGAA+GGG | - | chr7_3:71525487-71525506 | None:intergenic | 35.0% |
| ! | TTGTAGCATACTTCTAAGGA+AGG | - | chr7_3:71525488-71525507 | None:intergenic | 35.0% |
| AATAATACTCCCTTGGTTAG+GGG | - | chr7_3:71525517-71525536 | None:intergenic | 35.0% | |
| TTAATGTGCATCACAGGTTT+GGG | - | chr7_3:71525559-71525578 | None:intergenic | 35.0% | |
| TAGATCTTAATGTGCATCAC+AGG | - | chr7_3:71525565-71525584 | None:intergenic | 35.0% | |
| TGGTCATTTAAACTCGATGT+TGG | - | chr7_3:71525721-71525740 | None:intergenic | 35.0% | |
| !! | CAAATATTGGGATTGGTCAT+CGG | + | chr7_3:71525739-71525758 | Msa1121470:intron | 35.0% |
| TGGTATAGTTATGAAGCTCT+TGG | - | chr7_3:71525813-71525832 | None:intergenic | 35.0% | |
| TTCACCATTTCCATTTCTGT+GGG | + | chr7_3:71525834-71525853 | Msa1121470:CDS | 35.0% | |
| TTACATCATTCCTTGGAAGT+AGG | + | chr7_3:71525904-71525923 | Msa1121470:CDS | 35.0% | |
| AATTGAGCATTACAGGAAAC+AGG | + | chr7_3:71525958-71525977 | Msa1121470:CDS | 35.0% | |
| TCCTTGAACAGTACTCAACA+CGG | - | chr7_3:71522870-71522889 | None:intergenic | 40.0% | |
| TCAAAGTAAAAGACGCGTTG+AGG | - | chr7_3:71523010-71523029 | None:intergenic | 40.0% | |
| CATATGATGCTGAAAGCAAC+CGG | + | chr7_3:71523245-71523264 | Msa1121470:exon | 40.0% | |
| ATATGATGCTGAAAGCAACC+GGG | + | chr7_3:71523246-71523265 | Msa1121470:exon | 40.0% | |
| AAATGTAAACACATCCTCCC+CGG | - | chr7_3:71523267-71523286 | None:intergenic | 40.0% | |
| CTGTTTCACGTATCCTTCAA+AGG | + | chr7_3:71523294-71523313 | Msa1121470:CDS | 40.0% | |
| TAATCTCAGGCTTCCTTTGA+AGG | - | chr7_3:71523310-71523329 | None:intergenic | 40.0% | |
| AAAGGAAGCCTGAGATTACA+AGG | + | chr7_3:71523312-71523331 | Msa1121470:CDS | 40.0% | |
| TCAGGAAACCTTGTAATCTC+AGG | - | chr7_3:71523323-71523342 | None:intergenic | 40.0% | |
| TTGTAGGGAAAACTGTCATC+AGG | - | chr7_3:71523341-71523360 | None:intergenic | 40.0% | |
| GGCGGATAATCTTCATTGTA+GGG | - | chr7_3:71523356-71523375 | None:intergenic | 40.0% | |
| CTACAATGAAGATTATCCGC+CGG | + | chr7_3:71523355-71523374 | Msa1121470:CDS | 40.0% | |
| ATGTAAAGATGACAGCCTAC+CGG | - | chr7_3:71523377-71523396 | None:intergenic | 40.0% | |
| AATATGTGGCCCTAAACAGA+TGG | - | chr7_3:71523526-71523545 | None:intergenic | 40.0% | |
| CGTATGGAGAAAGTTTGGTT+GGG | - | chr7_3:71523593-71523612 | None:intergenic | 40.0% | |
| TTTCTCCATACGCAATAGTC+AGG | + | chr7_3:71523601-71523620 | Msa1121470:intron | 40.0% | |
| TTCTCCATACGCAATAGTCA+GGG | + | chr7_3:71523602-71523621 | Msa1121470:intron | 40.0% | |
| TCAAACCCCAAACCATTTGT+TGG | + | chr7_3:71523626-71523645 | Msa1121470:intron | 40.0% | |
| TAGGGGACAAAACCAACAAA+TGG | - | chr7_3:71523641-71523660 | None:intergenic | 40.0% | |
| TAAAACTGCATAGCTGCAGT+GGG | - | chr7_3:71524020-71524039 | None:intergenic | 40.0% | |
| TTAAAACTGCATAGCTGCAG+TGG | - | chr7_3:71524021-71524040 | None:intergenic | 40.0% | |
| GCGAGTTTGATGAGAAGAAT+GGG | + | chr7_3:71524218-71524237 | Msa1121470:CDS | 40.0% | |
| CGAGTTTGATGAGAAGAATG+GGG | + | chr7_3:71524219-71524238 | Msa1121470:CDS | 40.0% | |
| AACTTACCCAGATACTCGAA+AGG | - | chr7_3:71524378-71524397 | None:intergenic | 40.0% | |
| ! | AGTGATTTCCAGTGTGGTTT+TGG | + | chr7_3:71524493-71524512 | Msa1121470:CDS | 40.0% |
| ! | AACCATTTTACAGCATTCCC+TGG | + | chr7_3:71524529-71524548 | Msa1121470:CDS | 40.0% |
| TTCCAGGGAATGCTGTAAAA+TGG | - | chr7_3:71524534-71524553 | None:intergenic | 40.0% | |
| GATTGTCTTTCATTGCCCAA+GGG | - | chr7_3:71524570-71524589 | None:intergenic | 40.0% | |
| TATAGTCATGCTGAAACTCG+GGG | - | chr7_3:71524672-71524691 | None:intergenic | 40.0% | |
| GTATAGTCATGCTGAAACTC+GGG | - | chr7_3:71524673-71524692 | None:intergenic | 40.0% | |
| GGTATAGTCATGCTGAAACT+CGG | - | chr7_3:71524674-71524693 | None:intergenic | 40.0% | |
| !! | CATGTGCTGATTGTAATCGT+AGG | - | chr7_3:71524695-71524714 | None:intergenic | 40.0% |
| TTACAATCAGCACATGCGTA+AGG | + | chr7_3:71524699-71524718 | Msa1121470:CDS | 40.0% | |
| GTCTCAACCATTGTCTTTCT+TGG | + | chr7_3:71524751-71524770 | Msa1121470:CDS | 40.0% | |
| CTGGTTGTTCCATATGTTGT+AGG | - | chr7_3:71524782-71524801 | None:intergenic | 40.0% | |
| TCTGTTCTTTGTGAAGTGGT+GGG | - | chr7_3:71524822-71524841 | None:intergenic | 40.0% | |
| TTCTGTTCTTTGTGAAGTGG+TGG | - | chr7_3:71524823-71524842 | None:intergenic | 40.0% | |
| CCATTCTGTTCTTTGTGAAG+TGG | - | chr7_3:71524826-71524845 | None:intergenic | 40.0% | |
| CCACTTCACAAAGAACAGAA+TGG | + | chr7_3:71524823-71524842 | Msa1121470:CDS | 40.0% | |
| ! | TGTTTGTGCCGTTGTTGTAA+TGG | + | chr7_3:71524897-71524916 | Msa1121470:CDS | 40.0% |
| GCTTTCTGTATGCTAGTGAA+TGG | - | chr7_3:71524937-71524956 | None:intergenic | 40.0% | |
| ! | TTAAAAAAGCACAGCTCCGA+TGG | - | chr7_3:71525211-71525230 | None:intergenic | 40.0% |
| ! | TACTTCTAAGGAAGGGGATT+TGG | - | chr7_3:71525480-71525499 | None:intergenic | 40.0% |
| ! | GTAGCATACTTCTAAGGAAG+GGG | - | chr7_3:71525486-71525505 | None:intergenic | 40.0% |
| ACAAATCAAACCCCTAACCA+AGG | + | chr7_3:71525504-71525523 | Msa1121470:intron | 40.0% | |
| CAAATCAAACCCCTAACCAA+GGG | + | chr7_3:71525505-71525524 | Msa1121470:intron | 40.0% | |
| CTTAATGTGCATCACAGGTT+TGG | - | chr7_3:71525560-71525579 | None:intergenic | 40.0% | |
| CGATGACCAATCCCAATATT+TGG | - | chr7_3:71525741-71525760 | None:intergenic | 40.0% | |
| CAGAAATGGAAATGGTGAAC+TGG | - | chr7_3:71525833-71525852 | None:intergenic | 40.0% | |
| GTTCACCATTTCCATTTCTG+TGG | + | chr7_3:71525833-71525852 | Msa1121470:intron | 40.0% | |
| TACTTAGGATCCTACTTCCA+AGG | - | chr7_3:71525917-71525936 | None:intergenic | 40.0% | |
| GTGAAGCAATTGAGCATTAC+AGG | + | chr7_3:71525951-71525970 | Msa1121470:CDS | 40.0% | |
| TTCATTGTTATCCAGCTGAG+AGG | - | chr7_3:71525985-71526004 | None:intergenic | 40.0% | |
| !! | TCATGTGTTGCTATTGGCTT+TGG | + | chr7_3:71526005-71526024 | Msa1121470:CDS | 40.0% |
| !! | TGTTGCTATTGGCTTTGGTT+TGG | + | chr7_3:71526010-71526029 | Msa1121470:CDS | 40.0% |
| !! | AGTTCCAAAGTCATTTTGCG+CGG | - | chr7_3:71526036-71526055 | None:intergenic | 40.0% |
| TATAGCCATGCTGAAACTCT+GGG | - | chr7_3:71526086-71526105 | None:intergenic | 40.0% | |
| ATGATGAAACGGCAGATGCT+GGG | - | chr7_3:71522595-71522614 | None:intergenic | 45.0% | |
| CAAGCTGAGACAAAGAGAAG+AGG | - | chr7_3:71522650-71522669 | None:intergenic | 45.0% | |
| ! | ACCGTGTTGAGTACTGTTCA+AGG | + | chr7_3:71522866-71522885 | Msa1121470:intron | 45.0% |
| TATGATGCTGAAAGCAACCG+GGG | + | chr7_3:71523247-71523266 | Msa1121470:exon | 45.0% | |
| GGGGAGGATGTGTTTACATT+TGG | + | chr7_3:71523266-71523285 | Msa1121470:CDS | 45.0% | |
| CGGCGGATAATCTTCATTGT+AGG | - | chr7_3:71523357-71523376 | None:intergenic | 45.0% | |
| AATGAAGATTATCCGCCGGT+AGG | + | chr7_3:71523359-71523378 | Msa1121470:intron | 45.0% | |
| ! | GTTTTCCGAGGGAGAATATG+TGG | - | chr7_3:71523540-71523559 | None:intergenic | 45.0% |
| CATATTCTCCCTCGGAAAAC+CGG | + | chr7_3:71523540-71523559 | Msa1121470:CDS | 45.0% | |
| GAAAACCGGTTGGACATTCA+AGG | + | chr7_3:71523554-71523573 | Msa1121470:CDS | 45.0% | |
| ACTCACCTTGAATGTCCAAC+CGG | - | chr7_3:71523562-71523581 | None:intergenic | 45.0% | |
| GCGTATGGAGAAAGTTTGGT+TGG | - | chr7_3:71523594-71523613 | None:intergenic | 45.0% | |
| TGATCCCTGACTATTGCGTA+TGG | - | chr7_3:71523609-71523628 | None:intergenic | 45.0% | |
| AAAACTGCATAGCTGCAGTG+GGG | - | chr7_3:71524019-71524038 | None:intergenic | 45.0% | |
| ! | GGAGTGTTAGAAGGTAAGTG+AGG | - | chr7_3:71524044-71524063 | None:intergenic | 45.0% |
| !! | TCAAGCATCGGAGTGTTAGA+AGG | - | chr7_3:71524053-71524072 | None:intergenic | 45.0% |
| !! | ACGTAGGAAGTGGGTTAAAC+GGG | - | chr7_3:71524197-71524216 | None:intergenic | 45.0% |
| !! | CACGTAGGAAGTGGGTTAAA+CGG | - | chr7_3:71524198-71524217 | None:intergenic | 45.0% |
| GGCGAGTTTGATGAGAAGAA+TGG | + | chr7_3:71524217-71524236 | Msa1121470:CDS | 45.0% | |
| AAAATGTTAGGAGTCGTCCG+TGG | + | chr7_3:71524350-71524369 | Msa1121470:CDS | 45.0% | |
| CAGATACTCGAAAGGTTCCA+CGG | - | chr7_3:71524370-71524389 | None:intergenic | 45.0% | |
| ! | GTGGAACCTTTCGAGTATCT+GGG | + | chr7_3:71524369-71524388 | Msa1121470:CDS | 45.0% |
| TTACAGCATTCCCTGGAAGT+AGG | + | chr7_3:71524536-71524555 | Msa1121470:CDS | 45.0% | |
| AAGTAGGCTTCCAATCCCTT+GGG | + | chr7_3:71524552-71524571 | Msa1121470:CDS | 45.0% | |
| TCTTTCATTGCCCAAGGGAT+TGG | - | chr7_3:71524565-71524584 | None:intergenic | 45.0% | |
| CGATTGTCTTTCATTGCCCA+AGG | - | chr7_3:71524571-71524590 | None:intergenic | 45.0% | |
| TGGATGACAATGAGCTGCAT+TGG | + | chr7_3:71524623-71524642 | Msa1121470:CDS | 45.0% | |
| AGGACAACCATACAGAAAGG+CGG | - | chr7_3:71524849-71524868 | None:intergenic | 45.0% | |
| GCAAGGACAACCATACAGAA+AGG | - | chr7_3:71524852-71524871 | None:intergenic | 45.0% | |
| TCTGTATGGTTGTCCTTGCT+TGG | + | chr7_3:71524853-71524872 | Msa1121470:CDS | 45.0% | |
| CTGTATGGTTGTCCTTGCTT+GGG | + | chr7_3:71524854-71524873 | Msa1121470:CDS | 45.0% | |
| ! | TTGTCCTTGCTTGGGTTGTT+CGG | + | chr7_3:71524862-71524881 | Msa1121470:CDS | 45.0% |
| AAAACCGAACAACCCAAGCA+AGG | - | chr7_3:71524869-71524888 | None:intergenic | 45.0% | |
| GTGTTCGTTACATTAGTCGG+TGG | + | chr7_3:71525015-71525034 | Msa1121470:CDS | 45.0% | |
| ! | ATTAGTCGGTGGACTTTCCA+TGG | + | chr7_3:71525026-71525045 | Msa1121470:CDS | 45.0% |
| ! | TTAGTCGGTGGACTTTCCAT+GGG | + | chr7_3:71525027-71525046 | Msa1121470:CDS | 45.0% |
| ! | TCCATGGGGTGGTATTGTTT+TGG | + | chr7_3:71525042-71525061 | Msa1121470:CDS | 45.0% |
| TCCAAAACAATACCACCCCA+TGG | - | chr7_3:71525046-71525065 | None:intergenic | 45.0% | |
| GTGGACTTCTTGGGAAAGTT+GGG | - | chr7_3:71525456-71525475 | None:intergenic | 45.0% | |
| TGTGGACTTCTTGGGAAAGT+TGG | - | chr7_3:71525457-71525476 | None:intergenic | 45.0% | |
| !! | GGATTTGGTGTGGACTTCTT+GGG | - | chr7_3:71525465-71525484 | None:intergenic | 45.0% |
| CAGTCCCACAGAAATGGAAA+TGG | - | chr7_3:71525841-71525860 | None:intergenic | 45.0% | |
| CTTCTTCAGTCCCACAGAAA+TGG | - | chr7_3:71525847-71525866 | None:intergenic | 45.0% | |
| GTATAGCCATGCTGAAACTC+TGG | - | chr7_3:71526087-71526106 | None:intergenic | 45.0% | |
| CATGATGAAACGGCAGATGC+TGG | - | chr7_3:71522596-71522615 | None:intergenic | 50.0% | |
| TAAAGATGACAGCCTACCGG+CGG | - | chr7_3:71523374-71523393 | None:intergenic | 50.0% | |
| TAGGGCCACATATTCTCCCT+CGG | + | chr7_3:71523532-71523551 | Msa1121470:CDS | 50.0% | |
| !! | ATGTCCAACCGGTTTTCCGA+GGG | - | chr7_3:71523551-71523570 | None:intergenic | 50.0% |
| !! | AATGTCCAACCGGTTTTCCG+AGG | - | chr7_3:71523552-71523571 | None:intergenic | 50.0% |
| AAACTGCATAGCTGCAGTGG+GGG | - | chr7_3:71524018-71524037 | None:intergenic | 50.0% | |
| !! | CGTAGGAAGTGGGTTAAACG+GGG | - | chr7_3:71524196-71524215 | None:intergenic | 50.0% |
| CGTTTAACCCACTTCCTACG+TGG | + | chr7_3:71524196-71524215 | Msa1121470:CDS | 50.0% | |
| AAACTCGCCACGTAGGAAGT+GGG | - | chr7_3:71524206-71524225 | None:intergenic | 50.0% | |
| TCTCATCAAACTCGCCACGT+AGG | - | chr7_3:71524213-71524232 | None:intergenic | 50.0% | |
| ! | CGTGGAACCTTTCGAGTATC+TGG | + | chr7_3:71524368-71524387 | Msa1121470:CDS | 50.0% |
| CTGCAGAGTGATTTCCAGTG+TGG | + | chr7_3:71524487-71524506 | Msa1121470:intron | 50.0% | |
| GGCACTTTCCAAAACCACAC+TGG | - | chr7_3:71524504-71524523 | None:intergenic | 50.0% | |
| GGATTGGAAGCCTACTTCCA+GGG | - | chr7_3:71524549-71524568 | None:intergenic | 50.0% | |
| GAAGTAGGCTTCCAATCCCT+TGG | + | chr7_3:71524551-71524570 | Msa1121470:CDS | 50.0% | |
| AGGAAACATGTTCACCCAGC+TGG | + | chr7_3:71524603-71524622 | Msa1121470:CDS | 50.0% | |
| CAGCTCATTGTCATCCAGCT+GGG | - | chr7_3:71524620-71524639 | None:intergenic | 50.0% | |
| ! | CTTTGTGAAGTGGTGGGACA+TGG | - | chr7_3:71524816-71524835 | None:intergenic | 50.0% |
| AGAATGGCCGCCTTTCTGTA+TGG | + | chr7_3:71524839-71524858 | Msa1121470:CDS | 50.0% | |
| ! | TAGTCGGTGGACTTTCCATG+GGG | + | chr7_3:71525028-71525047 | Msa1121470:CDS | 50.0% |
| AGCACAGCTCCGATGGAATA+AGG | - | chr7_3:71525204-71525223 | None:intergenic | 50.0% | |
| !! | GGGATTTGGTGTGGACTTCT+TGG | - | chr7_3:71525466-71525485 | None:intergenic | 50.0% |
| !! | CTAAGGAAGGGGATTTGGTG+TGG | - | chr7_3:71525475-71525494 | None:intergenic | 50.0% |
| ATCGGAATTGCAGCTCTTCC+AGG | + | chr7_3:71525757-71525776 | Msa1121470:intron | 50.0% | |
| ! | CCATTCTACATCAGAGCACC+AGG | - | chr7_3:71525790-71525809 | None:intergenic | 50.0% |
| CCTGGTGCTCTGATGTAGAA+TGG | + | chr7_3:71525787-71525806 | Msa1121470:intron | 50.0% | |
| TTGGCCGCGCAAAATGACTT+TGG | + | chr7_3:71526029-71526048 | Msa1121470:CDS | 50.0% | |
| TGCTGAAACTCTGGGTCTCT+TGG | - | chr7_3:71526078-71526097 | None:intergenic | 50.0% | |
| AGAGACCCAGAGTTTCAGCA+TGG | + | chr7_3:71526078-71526097 | Msa1121470:CDS | 50.0% | |
| TTCTCCCTCGGAAAACCGGT+TGG | + | chr7_3:71523544-71523563 | Msa1121470:CDS | 55.0% | |
| AACTGCATAGCTGCAGTGGG+GGG | - | chr7_3:71524017-71524036 | None:intergenic | 55.0% | |
| CAAACTCGCCACGTAGGAAG+TGG | - | chr7_3:71524207-71524226 | None:intergenic | 55.0% | |
| GGGATTGGAAGCCTACTTCC+AGG | - | chr7_3:71524550-71524569 | None:intergenic | 55.0% | |
| GCAGCTCATTGTCATCCAGC+TGG | - | chr7_3:71524621-71524640 | None:intergenic | 55.0% | |
| ! | TACATCAGAGCACCAGGTGC+AGG | - | chr7_3:71525784-71525803 | None:intergenic | 55.0% |
| AGGAAACAGGTCCTCTCAGC+TGG | + | chr7_3:71525971-71525990 | Msa1121470:CDS | 55.0% | |
| GATGCTGAAAGCAACCGGGG+AGG | + | chr7_3:71523250-71523269 | Msa1121470:CDS | 60.0% | |
| ! | TCGGTGGACTTTCCATGGGG+TGG | + | chr7_3:71525031-71525050 | Msa1121470:CDS | 60.0% |
| GCTCTTCCAGGTCCTGCACC+TGG | + | chr7_3:71525769-71525788 | Msa1121470:intron | 65.0% | |
| ! | AGAGCACCAGGTGCAGGACC+TGG | - | chr7_3:71525778-71525797 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 71522581 | 71526112 | 71522581 | ID=Msa1121470;Name=Msa1121470 |
| chr7_3 | mRNA | 71522581 | 71526112 | 71522581 | ID=Msa1121470-mRNA-1;Parent=Msa1121470;Name=Msa1121470-mRNA-1;_AED=0.25;_eAED=0.25;_QI=278|0.8|0.66|0.83|0.8|0.66|6|0|426 |
| chr7_3 | exon | 71522581 | 71522796 | 71522581 | ID=Msa1121470-mRNA-1:exon:18308;Parent=Msa1121470-mRNA-1 |
| chr7_3 | exon | 71523186 | 71523376 | 71523186 | ID=Msa1121470-mRNA-1:exon:18309;Parent=Msa1121470-mRNA-1 |
| chr7_3 | exon | 71523504 | 71523575 | 71523504 | ID=Msa1121470-mRNA-1:exon:18310;Parent=Msa1121470-mRNA-1 |
| chr7_3 | exon | 71524184 | 71524390 | 71524184 | ID=Msa1121470-mRNA-1:exon:18311;Parent=Msa1121470-mRNA-1 |
| chr7_3 | exon | 71524493 | 71525086 | 71524493 | ID=Msa1121470-mRNA-1:exon:18312;Parent=Msa1121470-mRNA-1 |
| chr7_3 | exon | 71525834 | 71526112 | 71525834 | ID=Msa1121470-mRNA-1:exon:18313;Parent=Msa1121470-mRNA-1 |
| chr7_3 | five_prime_UTR | 71522581 | 71522796 | 71522581 | ID=Msa1121470-mRNA-1:five_prime_utr;Parent=Msa1121470-mRNA-1 |
| chr7_3 | five_prime_UTR | 71523186 | 71523247 | 71523186 | ID=Msa1121470-mRNA-1:five_prime_utr;Parent=Msa1121470-mRNA-1 |
| chr7_3 | CDS | 71523248 | 71523376 | 71523248 | ID=Msa1121470-mRNA-1:cds;Parent=Msa1121470-mRNA-1 |
| chr7_3 | CDS | 71523504 | 71523575 | 71523504 | ID=Msa1121470-mRNA-1:cds;Parent=Msa1121470-mRNA-1 |
| chr7_3 | CDS | 71524184 | 71524390 | 71524184 | ID=Msa1121470-mRNA-1:cds;Parent=Msa1121470-mRNA-1 |
| chr7_3 | CDS | 71524493 | 71525086 | 71524493 | ID=Msa1121470-mRNA-1:cds;Parent=Msa1121470-mRNA-1 |
| chr7_3 | CDS | 71525834 | 71526112 | 71525834 | ID=Msa1121470-mRNA-1:cds;Parent=Msa1121470-mRNA-1 |
| Gene Sequence |
| Protein sequence |
