Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1123840 | XP_003625505.1 | 88.117 | 446 | 18 | 2 | 1 | 411 | 1 | 446 | 0.0 | 764 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1123840 | sp|Q94AA1|UN933_ARATH | 61.985 | 413 | 123 | 5 | 7 | 387 | 4 | 414 | 1.30e-169 | 486 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1123840 | G7L0K8 | 88.117 | 446 | 18 | 2 | 1 | 411 | 1 | 446 | 0.0 | 764 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1123840 | Msa1385820 | 0.922649 | 7.468520e-89 | -8.615850e-47 |
| Msa1123840 | Msa1409270 | 0.928308 | 3.469607e-92 | -8.615850e-47 |
| Msa1123840 | Msa1437870 | 0.897583 | 1.220930e-76 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1123840 | MtrunA17_Chr7g0262981 | 88.117 | 446 | 18 | 2 | 1 | 411 | 1 | 446 | 0.0 | 764 |
| Msa1123840 | MtrunA17_Chr7g0262971 | 82.432 | 444 | 46 | 1 | 1 | 412 | 1 | 444 | 0.0 | 715 |
| Msa1123840 | MtrunA17_Chr7g0262951 | 71.136 | 440 | 88 | 3 | 10 | 410 | 2 | 441 | 0.0 | 607 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1123840 | AT3G09470.2 | 62.326 | 430 | 128 | 5 | 7 | 404 | 4 | 431 | 1.53e-179 | 507 |
Find 98 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAACCTGTATTGCAGTTTAT+TGG | 0.159343 | 7_3:+74824722 | Msa1123840:intron |
| TTACTCATCTTTCTAGCTTA+TGG | 0.165736 | 7_3:+74822745 | Msa1123840:CDS |
| TACATTATATATACTTATTT+TGG | 0.171202 | 7_3:+74826147 | Msa1123840:CDS |
| TCTTACTTCTGCTAGATTTC+AGG | 0.182675 | 7_3:+74826003 | Msa1123840:CDS |
| GCTTTGATGGTTGGAACTTC+TGG | 0.243991 | 7_3:+74823409 | Msa1123840:CDS |
| ACTCCAGCAATTGGTGTTTC+TGG | 0.248058 | 7_3:+74825699 | Msa1123840:CDS |
| ATTACATCAATAGTTTCTTT+TGG | 0.283502 | 7_3:+74825954 | Msa1123840:CDS |
| GGTATTGCAATGGCAGTATA+TGG | 0.286764 | 7_3:+74825726 | Msa1123840:CDS |
| GTTCCGGCTTCTGTGTATCT+TGG | 0.288738 | 7_3:+74824367 | Msa1123840:CDS |
| TCCAACCATCAAAGCATTCT+TGG | 0.289790 | 7_3:-74823401 | None:intergenic |
| AATCTTGTCTTGTAAAGAAT+TGG | 0.293097 | 7_3:-74822455 | None:intergenic |
| TTCCACGAAGGTGCAGTAAT+TGG | 0.303941 | 7_3:+74824555 | Msa1123840:CDS |
| CGGATCCAAGAATGCTTTGA+TGG | 0.318222 | 7_3:+74823396 | Msa1123840:CDS |
| GTGACTTCAACGGAGAGTTC+TGG | 0.318467 | 7_3:+74824577 | Msa1123840:CDS |
| TAATGTGCTTTCTGCATAAA+CGG | 0.336205 | 7_3:+74825369 | Msa1123840:CDS |
| TGGTTGGAACTTCTGGTTAT+TGG | 0.338454 | 7_3:+74823416 | Msa1123840:CDS |
| TCTTTGGTGGTGCGGATTCT+CGG | 0.346413 | 7_3:+74823376 | Msa1123840:CDS |
| CGCACTTGCAGTTACCAATT+GGG | 0.364795 | 7_3:-74823463 | None:intergenic |
| ATGCAGGTATACATTGGTTC+CGG | 0.390937 | 7_3:+74824351 | Msa1123840:intron |
| AATGTGCTTTCTGCATAAAC+GGG | 0.395329 | 7_3:+74825370 | Msa1123840:CDS |
| TGACTTCAACGGAGAGTTCT+GGG | 0.396002 | 7_3:+74824578 | Msa1123840:CDS |
| CTGAAGGAAATGTGCCGTAT+AGG | 0.399751 | 7_3:-74826781 | None:intergenic |
| CTGCAAACTTGAAGCCCAAT+TGG | 0.400523 | 7_3:+74823449 | Msa1123840:CDS |
| AGTAGAGTTGGAAAATTAGT+TGG | 0.400722 | 7_3:-74822549 | None:intergenic |
| TTCCGGCTTCTGTGTATCTT+GGG | 0.404081 | 7_3:+74824368 | Msa1123840:CDS |
| GTCGCTGGTCGTCTCACCTT+TGG | 0.407085 | 7_3:+74825921 | Msa1123840:CDS |
| ACGCAGCTCAATGCTTTACT+AGG | 0.408249 | 7_3:+74826205 | Msa1123840:CDS |
| TTAAATATGCCAGTGTTCTC+TGG | 0.409023 | 7_3:+74825899 | Msa1123840:intron |
| AAAAGAAACTATTGATGTAA+TGG | 0.422422 | 7_3:-74825952 | None:intergenic |
| GCTTTATTGGGCATTGGTGA+TGG | 0.429288 | 7_3:+74826172 | Msa1123840:CDS |
| AGCATATCCAGTGGATTTGT+TGG | 0.430052 | 7_3:+74826124 | Msa1123840:intron |
| CAAGGGAGGATACAAGCATT+TGG | 0.433232 | 7_3:+74825403 | Msa1123840:CDS |
| TTCTATATTATGGGTTGGAC+AGG | 0.438750 | 7_3:+74824399 | Msa1123840:CDS |
| GTAGAGTTGGAAAATTAGTT+GGG | 0.440252 | 7_3:-74822548 | None:intergenic |
| GCAATTGGTGTTTCTGGTGT+TGG | 0.445627 | 7_3:+74825705 | Msa1123840:CDS |
| TCCAAGAATGCTTTGATGGT+TGG | 0.450947 | 7_3:+74823400 | Msa1123840:CDS |
| TGCTGGAGTTACAACATACT+TGG | 0.451971 | 7_3:-74825685 | None:intergenic |
| TTATGGTTGGCTCTCAAGGT+GGG | 0.452741 | 7_3:+74826690 | Msa1123840:CDS |
| AAGCATTTGGATGCCGGCGC+TGG | 0.452753 | 7_3:+74825416 | Msa1123840:CDS |
| GTCTACAACACGCATTTGTA+TGG | 0.454305 | 7_3:+74825534 | Msa1123840:CDS |
| TTCGTTCCAAGCAGTTATCA+TGG | 0.455355 | 7_3:+74826629 | Msa1123840:CDS |
| TTGGCTGCTTTATTGGGCAT+TGG | 0.459579 | 7_3:+74826166 | Msa1123840:CDS |
| ACACCAGAAACACCAATTGC+TGG | 0.459964 | 7_3:-74825702 | None:intergenic |
| GTATTGCAATGGCAGTATAT+GGG | 0.463221 | 7_3:+74825727 | Msa1123840:CDS |
| TGCTCTACTCAGTGATGGGC+AGG | 0.464947 | 7_3:+74824760 | Msa1123840:CDS |
| GATTTGGGTACGACTTCGCT+TGG | 0.480382 | 7_3:+74823313 | Msa1123840:CDS |
| TTCTGGTTATTGGTTATACC+TGG | 0.481480 | 7_3:+74823426 | Msa1123840:CDS |
| TATGTTGTAACTCCAGCAAT+TGG | 0.485973 | 7_3:+74825690 | Msa1123840:CDS |
| GCTCAAAATATGAACATCTC+TGG | 0.487925 | 7_3:-74822713 | None:intergenic |
| TGTGCTTCTATATTATGGGT+TGG | 0.496046 | 7_3:+74824394 | Msa1123840:CDS |
| CACCAATTACTGCACCTTCG+TGG | 0.497583 | 7_3:-74824557 | None:intergenic |
| AAATATGAACATCTCTGGTA+TGG | 0.497989 | 7_3:-74822708 | None:intergenic |
| TATGGTTGGCTCTCAAGGTG+GGG | 0.500881 | 7_3:+74826691 | Msa1123840:CDS |
| CACCAAAGGTCATAACGAAA+AGG | 0.505513 | 7_3:-74825340 | None:intergenic |
| ACATTTGCTCTACTCAGTGA+TGG | 0.507367 | 7_3:+74824755 | Msa1123840:CDS |
| ATTTGGGTACGACTTCGCTT+GGG | 0.510297 | 7_3:+74823314 | Msa1123840:CDS |
| CTGCTTGGAACGAAATGTAC+GGG | 0.512143 | 7_3:-74826620 | None:intergenic |
| TGTACACTTCATTCAACTGA+AGG | 0.514226 | 7_3:-74826797 | None:intergenic |
| GGATACAAGCATTTGGATGC+CGG | 0.516171 | 7_3:+74825410 | Msa1123840:CDS |
| GGGTGTATACACACTTCATC+AGG | 0.518181 | 7_3:+74824599 | Msa1123840:CDS |
| AACCCAAGATACACAGAAGC+CGG | 0.518246 | 7_3:-74824370 | None:intergenic |
| AAACAATAAAGTTGTGCCAT+TGG | 0.524098 | 7_3:-74825309 | None:intergenic |
| TGCCAGTGTTCTCTGGTCGC+TGG | 0.524130 | 7_3:+74825906 | Msa1123840:intron |
| TTTATGGTTGGCTCTCAAGG+TGG | 0.530407 | 7_3:+74826689 | Msa1123840:CDS |
| TGGGCTTCAAGTTTGCAGCC+AGG | 0.531249 | 7_3:-74823444 | None:intergenic |
| TAATGTACCAACAAATCCAC+TGG | 0.537543 | 7_3:-74826131 | None:intergenic |
| TTCTGGTGTTGGTATTGCAA+TGG | 0.544148 | 7_3:+74825716 | Msa1123840:CDS |
| AGACATACATGGAGTAGAGT+TGG | 0.544896 | 7_3:-74822561 | None:intergenic |
| GCACATTAATATTGCACCAA+AGG | 0.548234 | 7_3:-74825354 | None:intergenic |
| GCAACATTAAATTCACTCAC+TGG | 0.560043 | 7_3:-74826733 | None:intergenic |
| ACATGACCATGATAACTGCT+TGG | 0.560534 | 7_3:-74826635 | None:intergenic |
| ACTGCTTGGAACGAAATGTA+CGG | 0.561713 | 7_3:-74826621 | None:intergenic |
| GGACTTTCATTCACCAGCGC+CGG | 0.562462 | 7_3:-74825429 | None:intergenic |
| TATTGCAATGGCAGTATATG+GGG | 0.568621 | 7_3:+74825728 | Msa1123840:CDS |
| CATTTGCTCTACTCAGTGAT+GGG | 0.570849 | 7_3:+74824756 | Msa1123840:CDS |
| GAACTGAGAACTTGAACCAA+TGG | 0.576895 | 7_3:+74822609 | Msa1123840:exon |
| GCAGTAATTGGTGACTTCAA+CGG | 0.585247 | 7_3:+74824567 | Msa1123840:CDS |
| ACTGTTATGCAGGTATACAT+TGG | 0.590098 | 7_3:+74824345 | Msa1123840:intron |
| TGAATAATCACAGAAGCCAT+TGG | 0.592595 | 7_3:-74822625 | None:intergenic |
| AATTCACTCACTGGTGGAGA+GGG | 0.593392 | 7_3:-74826724 | None:intergenic |
| ATCAGTGATTCAACAACTAA+CGG | 0.599267 | 7_3:-74822664 | None:intergenic |
| TGTATCTATGTAGACATACA+TGG | 0.600352 | 7_3:-74822572 | None:intergenic |
| TATAGCATGACTGCGTGCAG+TGG | 0.601352 | 7_3:-74824523 | None:intergenic |
| CTGTAGGAGGGAAGTACCAA+TGG | 0.601368 | 7_3:+74825293 | Msa1123840:intron |
| AAATTCACTCACTGGTGGAG+AGG | 0.602947 | 7_3:-74826725 | None:intergenic |
| CGGGGTGATAATAGCAAGGG+AGG | 0.610044 | 7_3:+74825389 | Msa1123840:CDS |
| TAAACGGGGTGATAATAGCA+AGG | 0.610785 | 7_3:+74825385 | Msa1123840:CDS |
| TTCTGATGCAGCATATCCAG+TGG | 0.611801 | 7_3:+74826115 | Msa1123840:intron |
| ATGAAGCTAAAGAAATATTG+TGG | 0.614353 | 7_3:-74822493 | None:intergenic |
| GCAGAGCGCTACAATTGCTA+CGG | 0.636383 | 7_3:+74826584 | Msa1123840:CDS |
| ACATTAAATTCACTCACTGG+TGG | 0.641025 | 7_3:-74826730 | None:intergenic |
| GACTTCAACGGAGAGTTCTG+GGG | 0.657674 | 7_3:+74824579 | Msa1123840:CDS |
| AAACGGGGTGATAATAGCAA+GGG | 0.682006 | 7_3:+74825386 | Msa1123840:CDS |
| AATGCTATTTAAACATGACA+TGG | 0.693354 | 7_3:+74826228 | Msa1123840:CDS |
| TGCTTGGAACGAAATGTACG+GGG | 0.696058 | 7_3:-74826619 | None:intergenic |
| ATAGATAACAATTTCCACGA+AGG | 0.705993 | 7_3:+74824543 | Msa1123840:CDS |
| ATGTGCTTTCTGCATAAACG+GGG | 0.713089 | 7_3:+74825371 | Msa1123840:CDS |
| TGTAATGGATGTGAGACCAA+AGG | 0.727481 | 7_3:-74825937 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATTTATTATTATTGTATT+TGG | + | chr7_3:74822818-74822837 | Msa1123840:intron | 10.0% |
| !!! | TTGATTTTAAATAAGATTAT+AGG | + | chr7_3:74823740-74823759 | Msa1123840:intron | 10.0% |
| !!! | TGATTTTAAATAAGATTATA+GGG | + | chr7_3:74823741-74823760 | Msa1123840:intron | 10.0% |
| !!! | TTTTTTTTTTTAAATAAGAC+TGG | + | chr7_3:74824635-74824654 | Msa1123840:intron | 10.0% |
| !!! | AGAATATTTTATATATTCTT+CGG | + | chr7_3:74825249-74825268 | Msa1123840:intron | 10.0% |
| !!! | TACATTATATATACTTATTT+TGG | + | chr7_3:74826147-74826166 | Msa1123840:CDS | 10.0% |
| !!! | ATCAAATTATTTAAGTTGTT+TGG | - | chr7_3:74823238-74823257 | None:intergenic | 15.0% |
| !! | AAATAATTTGATTGTGAATT+TGG | + | chr7_3:74823246-74823265 | Msa1123840:intron | 15.0% |
| !! | TATAGTAATTAATTATGTTC+TGG | + | chr7_3:74823922-74823941 | Msa1123840:intron | 15.0% |
| !! | ATAGTAATTAATTATGTTCT+GGG | + | chr7_3:74823923-74823942 | Msa1123840:intron | 15.0% |
| !!! | CATAAATCATATTTTGATTT+CGG | + | chr7_3:74823949-74823968 | Msa1123840:intron | 15.0% |
| !!! | TTTTTTGTTCTTATAGTATT+GGG | + | chr7_3:74823982-74824001 | Msa1123840:intron | 15.0% |
| !!! | TTTTTTCTTTAATAATCAAG+TGG | + | chr7_3:74824827-74824846 | Msa1123840:intron | 15.0% |
| !!! | TGTACAAACAAATTATTTTA+AGG | + | chr7_3:74825148-74825167 | Msa1123840:intron | 15.0% |
| !! | ATAATGATATAAGAGATATT+TGG | - | chr7_3:74826507-74826526 | None:intergenic | 15.0% |
| !! | ATTATTGTATTTGGATTATG+AGG | + | chr7_3:74822827-74822846 | Msa1123840:intron | 20.0% |
| !! | ATTTGACACAAATTTACTAA+TGG | - | chr7_3:74822867-74822886 | None:intergenic | 20.0% |
| !!! | ATTGTATGTTTTGAATTTTC+AGG | + | chr7_3:74823285-74823304 | Msa1123840:intron | 20.0% |
| !! | TGTATCTATCTTATTATTCA+AGG | - | chr7_3:74823594-74823613 | None:intergenic | 20.0% |
| !!! | TTCAATCAAAATGTTGATTA+TGG | - | chr7_3:74823790-74823809 | None:intergenic | 20.0% |
| !!! | GTTTTTTGTTCTTATAGTAT+TGG | + | chr7_3:74823981-74824000 | Msa1123840:intron | 20.0% |
| !!! | TTTTTGTTCTTATAGTATTG+GGG | + | chr7_3:74823983-74824002 | Msa1123840:intron | 20.0% |
| !!! | TGAATAATACTAGCTTATTA+TGG | + | chr7_3:74824298-74824317 | Msa1123840:intron | 20.0% |
| !! | ATTAAAACAACTTGAATACT+TGG | - | chr7_3:74825045-74825064 | None:intergenic | 20.0% |
| !! | AAAAGAAACTATTGATGTAA+TGG | - | chr7_3:74825955-74825974 | None:intergenic | 20.0% |
| !!! | ATTACATCAATAGTTTCTTT+TGG | + | chr7_3:74825954-74825973 | Msa1123840:CDS | 20.0% |
| !! | CAAAATGAAATTACATTCTA+AGG | - | chr7_3:74826077-74826096 | None:intergenic | 20.0% |
| !!! | CATTTTGCTTATATTTTCAT+TGG | + | chr7_3:74826090-74826109 | Msa1123840:intron | 20.0% |
| !! | TATATTTCAGCGAAATAAAA+GGG | - | chr7_3:74826271-74826290 | None:intergenic | 20.0% |
| !! | GTCAAATTTATAATACTTTG+CGG | + | chr7_3:74826527-74826546 | Msa1123840:intron | 20.0% |
| ! | AATCTTGTCTTGTAAAGAAT+TGG | - | chr7_3:74822458-74822477 | None:intergenic | 25.0% |
| ! | ATGAAGCTAAAGAAATATTG+TGG | - | chr7_3:74822496-74822515 | None:intergenic | 25.0% |
| ! | AAAGATTGCAACATAGAAAT+TGG | - | chr7_3:74822943-74822962 | None:intergenic | 25.0% |
| ! | GAGTTCAAGCTTATTTAATA+TGG | - | chr7_3:74822980-74822999 | None:intergenic | 25.0% |
| ! | ATGTATAAATATGTATGGAC+AGG | - | chr7_3:74823173-74823192 | None:intergenic | 25.0% |
| ! | GTTGGATGTATAAATATGTA+TGG | - | chr7_3:74823178-74823197 | None:intergenic | 25.0% |
| ! | TAATTTGATTGTGAATTTGG+AGG | + | chr7_3:74823249-74823268 | Msa1123840:intron | 25.0% |
| !!! | TTTTTCTGTTTTTGCTTCTT+TGG | + | chr7_3:74823360-74823379 | Msa1123840:CDS | 25.0% |
| ! | TATGAACTTATACTTTGGTA+GGG | - | chr7_3:74824017-74824036 | None:intergenic | 25.0% |
| ! | ATATGAACTTATACTTTGGT+AGG | - | chr7_3:74824018-74824037 | None:intergenic | 25.0% |
| ! | AAGCATATGAACTTATACTT+TGG | - | chr7_3:74824022-74824041 | None:intergenic | 25.0% |
| ! | ATTATCCTTATATTCCATGA+AGG | + | chr7_3:74824082-74824101 | Msa1123840:intron | 25.0% |
| ! | TCTTAACAAGTTAAACTACA+GGG | - | chr7_3:74824114-74824133 | None:intergenic | 25.0% |
| ! | ATCTTAACAAGTTAAACTAC+AGG | - | chr7_3:74824115-74824134 | None:intergenic | 25.0% |
| !!! | ATTTAGGTTTTGTTTTCTCT+AGG | - | chr7_3:74824144-74824163 | None:intergenic | 25.0% |
| !!! | TATATTGTTGTCGTTGATTT+AGG | - | chr7_3:74824160-74824179 | None:intergenic | 25.0% |
| !! | GTTTTGTGCTTCTATATTAT+GGG | + | chr7_3:74824390-74824409 | Msa1123840:CDS | 25.0% |
| !! | GTTTAAAGCTCAACTAAATT+TGG | - | chr7_3:74824958-74824977 | None:intergenic | 25.0% |
| ! | AAGGAAATGAAAATATGAGT+TGG | + | chr7_3:74825167-74825186 | Msa1123840:intron | 25.0% |
| ! | AGGAAATGAAAATATGAGTT+GGG | + | chr7_3:74825168-74825187 | Msa1123840:intron | 25.0% |
| ! | GATGAGAATTCATTGTTAAA+GGG | - | chr7_3:74825205-74825224 | None:intergenic | 25.0% |
| ! | AGATGAGAATTCATTGTTAA+AGG | - | chr7_3:74825206-74825225 | None:intergenic | 25.0% |
| ! | CATTTGTATGGTAATTTCAT+AGG | + | chr7_3:74825546-74825565 | Msa1123840:intron | 25.0% |
| !! | AATGCTATTTAAACATGACA+TGG | + | chr7_3:74826228-74826247 | Msa1123840:CDS | 25.0% |
| ! | GTATATTTCAGCGAAATAAA+AGG | - | chr7_3:74826272-74826291 | None:intergenic | 25.0% |
| ! | AAAAAAGTAATAGAGAAGCA+AGG | - | chr7_3:74826339-74826358 | None:intergenic | 25.0% |
| ! | CAATACTAGAACAATAATGT+GGG | - | chr7_3:74826440-74826459 | None:intergenic | 25.0% |
| !! | TATTTTGCTGAAGAATATTC+AGG | + | chr7_3:74826862-74826881 | Msa1123840:three_prime_UTR | 25.0% |
| GTAGAGTTGGAAAATTAGTT+GGG | - | chr7_3:74822551-74822570 | None:intergenic | 30.0% | |
| AGTAGAGTTGGAAAATTAGT+TGG | - | chr7_3:74822552-74822571 | None:intergenic | 30.0% | |
| TGTATCTATGTAGACATACA+TGG | - | chr7_3:74822575-74822594 | None:intergenic | 30.0% | |
| ATCAGTGATTCAACAACTAA+CGG | - | chr7_3:74822667-74822686 | None:intergenic | 30.0% | |
| AAATATGAACATCTCTGGTA+TGG | - | chr7_3:74822711-74822730 | None:intergenic | 30.0% | |
| !! | TTACTCATCTTTCTAGCTTA+TGG | + | chr7_3:74822745-74822764 | Msa1123840:CDS | 30.0% |
| CATCACAAAAGTTAGTTCAA+AGG | + | chr7_3:74822999-74823018 | Msa1123840:intron | 30.0% | |
| AAGTTCAGTTAACATGATAC+TGG | - | chr7_3:74823144-74823163 | None:intergenic | 30.0% | |
| !! | GTATGTTTTGAATTTTCAGG+AGG | + | chr7_3:74823288-74823307 | Msa1123840:intron | 30.0% |
| AATGATTACTGATGCAATTG+TGG | + | chr7_3:74823613-74823632 | Msa1123840:intron | 30.0% | |
| ! | TCAGCATTTCTGAGTTATTT+TGG | + | chr7_3:74823703-74823722 | Msa1123840:intron | 30.0% |
| ! | AAGATTATAGGGCACTTATT+TGG | + | chr7_3:74823752-74823771 | Msa1123840:intron | 30.0% |
| !!! | TCATATTTTGATTTCGGCTT+AGG | + | chr7_3:74823955-74823974 | Msa1123840:intron | 30.0% |
| !!! | CATATTTTGATTTCGGCTTA+GGG | + | chr7_3:74823956-74823975 | Msa1123840:intron | 30.0% |
| CTTAACAAGTTAAACTACAG+GGG | - | chr7_3:74824113-74824132 | None:intergenic | 30.0% | |
| ! | CATCAAATGAAGAGTTTTTG+AGG | - | chr7_3:74824186-74824205 | None:intergenic | 30.0% |
| CTCAAAAACTCTTCATTTGA+TGG | + | chr7_3:74824184-74824203 | Msa1123840:intron | 30.0% | |
| TGATGGTTGACTATCATTTA+TGG | + | chr7_3:74824201-74824220 | Msa1123840:intron | 30.0% | |
| GATGGTTGACTATCATTTAT+GGG | + | chr7_3:74824202-74824221 | Msa1123840:intron | 30.0% | |
| !!! | TGCCTTTTTTAACACCATTT+GGG | + | chr7_3:74824247-74824266 | Msa1123840:intron | 30.0% |
| ! | AACCCAAATGGTGTTAAAAA+AGG | - | chr7_3:74824252-74824271 | None:intergenic | 30.0% |
| CGTATAATGTAAAACCCAAA+TGG | - | chr7_3:74824264-74824283 | None:intergenic | 30.0% | |
| ACATTATACGATTGTGTATG+TGG | + | chr7_3:74824274-74824293 | Msa1123840:intron | 30.0% | |
| !! | GGTTTTGTGCTTCTATATTA+TGG | + | chr7_3:74824389-74824408 | Msa1123840:CDS | 30.0% |
| ATAGATAACAATTTCCACGA+AGG | + | chr7_3:74824543-74824562 | Msa1123840:CDS | 30.0% | |
| AAACCTGTATTGCAGTTTAT+TGG | + | chr7_3:74824722-74824741 | Msa1123840:intron | 30.0% | |
| TTTCCAATAAACTGCAATAC+AGG | - | chr7_3:74824728-74824747 | None:intergenic | 30.0% | |
| ! | CTAAATTTGGACCAAGTTTT+CGG | - | chr7_3:74824945-74824964 | None:intergenic | 30.0% |
| AAACAATAAAGTTGTGCCAT+TGG | - | chr7_3:74825312-74825331 | None:intergenic | 30.0% | |
| TAATGTGCTTTCTGCATAAA+CGG | + | chr7_3:74825369-74825388 | Msa1123840:CDS | 30.0% | |
| TGATCTACATAGAGACTTAA+GGG | - | chr7_3:74825453-74825472 | None:intergenic | 30.0% | |
| TAGACCTGAATATGCTATAA+GGG | - | chr7_3:74825519-74825538 | None:intergenic | 30.0% | |
| CATCAACAAACATTACAAAG+TGG | - | chr7_3:74825638-74825657 | None:intergenic | 30.0% | |
| TTGATGAAATACTTCTTCAC+AGG | + | chr7_3:74825652-74825671 | Msa1123840:intron | 30.0% | |
| TGATGAAATACTTCTTCACA+GGG | + | chr7_3:74825653-74825672 | Msa1123840:intron | 30.0% | |
| !! | TGGAATAGTAAGTATTGACA+TGG | + | chr7_3:74825758-74825777 | Msa1123840:intron | 30.0% |
| !!! | ACTTATTTTGGCTGCTTTAT+TGG | + | chr7_3:74826159-74826178 | Msa1123840:CDS | 30.0% |
| !!! | CTTATTTTGGCTGCTTTATT+GGG | + | chr7_3:74826160-74826179 | Msa1123840:CDS | 30.0% |
| ! | GCAAGGCATAATTTGAATTT+TGG | - | chr7_3:74826299-74826318 | None:intergenic | 30.0% |
| !!! | GCTTCTCTATTACTTTTTTG+AGG | + | chr7_3:74826340-74826359 | Msa1123840:intron | 30.0% |
| GCAATACTAGAACAATAATG+TGG | - | chr7_3:74826441-74826460 | None:intergenic | 30.0% | |
| AGGTGATTAAGAAATGAATC+AGG | - | chr7_3:74826476-74826495 | None:intergenic | 30.0% | |
| AGAGATATTTGGAAAAGAGA+AGG | - | chr7_3:74826496-74826515 | None:intergenic | 30.0% | |
| !!! | GCATAGTCATTTTTCCTATA+CGG | + | chr7_3:74826767-74826786 | Msa1123840:three_prime_UTR | 30.0% |
| TGAATAATCACAGAAGCCAT+TGG | - | chr7_3:74822628-74822647 | None:intergenic | 35.0% | |
| GCTCAAAATATGAACATCTC+TGG | - | chr7_3:74822716-74822735 | None:intergenic | 35.0% | |
| TTGTGTCAAATGTCTGTCAA+AGG | + | chr7_3:74822876-74822895 | Msa1123840:intron | 35.0% | |
| AAATGTCTGTCAAAGGATCA+GGG | + | chr7_3:74822883-74822902 | Msa1123840:intron | 35.0% | |
| TCGGTTTAAAGATCACAATG+TGG | - | chr7_3:74823119-74823138 | None:intergenic | 35.0% | |
| AGTTAACATGATACTGGAGT+CGG | - | chr7_3:74823138-74823157 | None:intergenic | 35.0% | |
| ATTTATACATCCAACAGTCC+AGG | + | chr7_3:74823183-74823202 | Msa1123840:intron | 35.0% | |
| !! | TGTTTTGAATTTTCAGGAGG+AGG | + | chr7_3:74823291-74823310 | Msa1123840:intron | 35.0% |
| !! | AATTTTCAGGAGGAGGATTT+GGG | + | chr7_3:74823298-74823317 | Msa1123840:intron | 35.0% |
| !!! | TTCTGTTTTTGCTTCTTTGG+TGG | + | chr7_3:74823363-74823382 | Msa1123840:CDS | 35.0% |
| ! | TTCTGGTTATTGGTTATACC+TGG | + | chr7_3:74823426-74823445 | Msa1123840:CDS | 35.0% |
| ! | TTCAAGGAAGTGCAAAACTA+AGG | - | chr7_3:74823578-74823597 | None:intergenic | 35.0% |
| CCAATCCTTCATGGAATATA+AGG | - | chr7_3:74824090-74824109 | None:intergenic | 35.0% | |
| CCTTATATTCCATGAAGGAT+TGG | + | chr7_3:74824087-74824106 | Msa1123840:intron | 35.0% | |
| !!! | CTGCCTTTTTTAACACCATT+TGG | + | chr7_3:74824246-74824265 | Msa1123840:intron | 35.0% |
| ACTGTTATGCAGGTATACAT+TGG | + | chr7_3:74824345-74824364 | Msa1123840:intron | 35.0% | |
| TGTGCTTCTATATTATGGGT+TGG | + | chr7_3:74824394-74824413 | Msa1123840:CDS | 35.0% | |
| !! | TTCTATATTATGGGTTGGAC+AGG | + | chr7_3:74824399-74824418 | Msa1123840:CDS | 35.0% |
| GAAGACTACTGACAATATGA+AGG | - | chr7_3:74824454-74824473 | None:intergenic | 35.0% | |
| ATCGAAGATCAGTGAAGATA+TGG | - | chr7_3:74824476-74824495 | None:intergenic | 35.0% | |
| TTCATGATTGACCGAAAACT+TGG | + | chr7_3:74824931-74824950 | Msa1123840:intron | 35.0% | |
| ! | ATTTGCTACAATCCATGTTG+TGG | + | chr7_3:74825013-74825032 | Msa1123840:intron | 35.0% |
| AAACAGTTGTAGACTTGTAG+TGG | + | chr7_3:74825074-74825093 | Msa1123840:intron | 35.0% | |
| ATTTCGTTTCTCATCACTGT+AGG | + | chr7_3:74825277-74825296 | Msa1123840:intron | 35.0% | |
| ! | TTCCTTTTCGTTATGACCTT+TGG | + | chr7_3:74825338-74825357 | Msa1123840:CDS | 35.0% |
| GCACATTAATATTGCACCAA+AGG | - | chr7_3:74825357-74825376 | None:intergenic | 35.0% | |
| AATGTGCTTTCTGCATAAAC+GGG | + | chr7_3:74825370-74825389 | Msa1123840:CDS | 35.0% | |
| GTGATCTACATAGAGACTTA+AGG | - | chr7_3:74825454-74825473 | None:intergenic | 35.0% | |
| ATACCCCTTATAGCATATTC+AGG | + | chr7_3:74825512-74825531 | Msa1123840:intron | 35.0% | |
| AGACCTGAATATGCTATAAG+GGG | - | chr7_3:74825518-74825537 | None:intergenic | 35.0% | |
| GTAGACCTGAATATGCTATA+AGG | - | chr7_3:74825520-74825539 | None:intergenic | 35.0% | |
| TCCTCATGATCTTCCAATAA+TGG | + | chr7_3:74825584-74825603 | Msa1123840:intron | 35.0% | |
| ACCATTATTGGAAGATCATG+AGG | - | chr7_3:74825588-74825607 | None:intergenic | 35.0% | |
| GGAAAGAAAACAAGAACTCA+GGG | - | chr7_3:74825612-74825631 | None:intergenic | 35.0% | |
| AGGAAAGAAAACAAGAACTC+AGG | - | chr7_3:74825613-74825632 | None:intergenic | 35.0% | |
| ACAAACATTACAAAGTGGAC+AGG | - | chr7_3:74825633-74825652 | None:intergenic | 35.0% | |
| TATGTTGTAACTCCAGCAAT+TGG | + | chr7_3:74825690-74825709 | Msa1123840:CDS | 35.0% | |
| GTATTGCAATGGCAGTATAT+GGG | + | chr7_3:74825727-74825746 | Msa1123840:CDS | 35.0% | |
| TATTGCAATGGCAGTATATG+GGG | + | chr7_3:74825728-74825747 | Msa1123840:CDS | 35.0% | |
| AATGCAAAACTGTAGTTCCT+TGG | + | chr7_3:74825781-74825800 | Msa1123840:intron | 35.0% | |
| ATGCAAAACTGTAGTTCCTT+GGG | + | chr7_3:74825782-74825801 | Msa1123840:intron | 35.0% | |
| TTAAATATGCCAGTGTTCTC+TGG | + | chr7_3:74825899-74825918 | Msa1123840:intron | 35.0% | |
| TCTTACTTCTGCTAGATTTC+AGG | + | chr7_3:74826003-74826022 | Msa1123840:CDS | 35.0% | |
| TTCGTAACATTCCTGTTGTT+TGG | + | chr7_3:74826026-74826045 | Msa1123840:intron | 35.0% | |
| TAATGTACCAACAAATCCAC+TGG | - | chr7_3:74826134-74826153 | None:intergenic | 35.0% | |
| TTTATAATACTTTGCGGTGC+AGG | + | chr7_3:74826533-74826552 | Msa1123840:intron | 35.0% | |
| ! | CTTTTGCACAGCTAAAGATA+TGG | + | chr7_3:74826562-74826581 | Msa1123840:CDS | 35.0% |
| ! | AATTGCTACGGTGTTCTTTT+TGG | + | chr7_3:74826596-74826615 | Msa1123840:CDS | 35.0% |
| !!! | TGTCACTCTGCAGTTTTTTA+TGG | + | chr7_3:74826673-74826692 | Msa1123840:CDS | 35.0% |
| !!! | ACTCTGCAGTTTTTTATGGT+TGG | + | chr7_3:74826677-74826696 | Msa1123840:CDS | 35.0% |
| !!! | TTTTTTATGGTTGGCTCTCA+AGG | + | chr7_3:74826686-74826705 | Msa1123840:CDS | 35.0% |
| ACATTAAATTCACTCACTGG+TGG | - | chr7_3:74826733-74826752 | None:intergenic | 35.0% | |
| GCAACATTAAATTCACTCAC+TGG | - | chr7_3:74826736-74826755 | None:intergenic | 35.0% | |
| TGTACACTTCATTCAACTGA+AGG | - | chr7_3:74826800-74826819 | None:intergenic | 35.0% | |
| AGACATACATGGAGTAGAGT+TGG | - | chr7_3:74822564-74822583 | None:intergenic | 40.0% | |
| GAACTGAGAACTTGAACCAA+TGG | + | chr7_3:74822609-74822628 | Msa1123840:exon | 40.0% | |
| ! | TCTCTGGTATGGCTTTTATG+CGG | - | chr7_3:74822700-74822719 | None:intergenic | 40.0% |
| CAAATGTCTGTCAAAGGATC+AGG | + | chr7_3:74822882-74822901 | Msa1123840:intron | 40.0% | |
| ! | GCAACATAGAAATTGGTCTC+AGG | - | chr7_3:74822936-74822955 | None:intergenic | 40.0% |
| ACATCCAACAACCTAGAAAC+CGG | + | chr7_3:74823046-74823065 | Msa1123840:intron | 40.0% | |
| ATGTTCAATTCCTGGACTGT+TGG | - | chr7_3:74823196-74823215 | None:intergenic | 40.0% | |
| ACAGTCCAGGAATTGAACAT+TGG | + | chr7_3:74823196-74823215 | Msa1123840:intron | 40.0% | |
| AGTCTCCAATGTTCAATTCC+TGG | - | chr7_3:74823204-74823223 | None:intergenic | 40.0% | |
| ATTGTGAATTTGGAGGCTAG+TGG | + | chr7_3:74823256-74823275 | Msa1123840:intron | 40.0% | |
| !! | GAATTTTCAGGAGGAGGATT+TGG | + | chr7_3:74823297-74823316 | Msa1123840:intron | 40.0% |
| !!! | TTTTTGCTTCTTTGGTGGTG+CGG | + | chr7_3:74823368-74823387 | Msa1123840:CDS | 40.0% |
| ! | TCCAAGAATGCTTTGATGGT+TGG | + | chr7_3:74823400-74823419 | Msa1123840:CDS | 40.0% |
| ! | TCCAACCATCAAAGCATTCT+TGG | - | chr7_3:74823404-74823423 | None:intergenic | 40.0% |
| ! | TGGTTGGAACTTCTGGTTAT+TGG | + | chr7_3:74823416-74823435 | Msa1123840:CDS | 40.0% |
| !!! | ATTTTGATTTCGGCTTAGGG+TGG | + | chr7_3:74823959-74823978 | Msa1123840:intron | 40.0% |
| !! | ATGCAGGTATACATTGGTTC+CGG | + | chr7_3:74824351-74824370 | Msa1123840:intron | 40.0% |
| CTGACAATATGAAGGAACTG+TGG | - | chr7_3:74824446-74824465 | None:intergenic | 40.0% | |
| AGTTAGATATGTTCCCTGAC+AGG | - | chr7_3:74824502-74824521 | None:intergenic | 40.0% | |
| ! | GCAGTAATTGGTGACTTCAA+CGG | + | chr7_3:74824567-74824586 | Msa1123840:CDS | 40.0% |
| ACATTTGCTCTACTCAGTGA+TGG | + | chr7_3:74824755-74824774 | Msa1123840:CDS | 40.0% | |
| CATTTGCTCTACTCAGTGAT+GGG | + | chr7_3:74824756-74824775 | Msa1123840:CDS | 40.0% | |
| TCTTGGTTGGCAATTACGAA+TGG | + | chr7_3:74824873-74824892 | Msa1123840:intron | 40.0% | |
| ! | TTGTAGTGGTTTGCCAACAA+AGG | + | chr7_3:74825088-74825107 | Msa1123840:intron | 40.0% |
| CTAGGTGTTTGCTCAATGTT+TGG | + | chr7_3:74825112-74825131 | Msa1123840:intron | 40.0% | |
| CACCAAAGGTCATAACGAAA+AGG | - | chr7_3:74825343-74825362 | None:intergenic | 40.0% | |
| ATGTGCTTTCTGCATAAACG+GGG | + | chr7_3:74825371-74825390 | Msa1123840:CDS | 40.0% | |
| TAAACGGGGTGATAATAGCA+AGG | + | chr7_3:74825385-74825404 | Msa1123840:CDS | 40.0% | |
| AAACGGGGTGATAATAGCAA+GGG | + | chr7_3:74825386-74825405 | Msa1123840:CDS | 40.0% | |
| GTCTCTATGTAGATCACTCA+CGG | + | chr7_3:74825457-74825476 | Msa1123840:intron | 40.0% | |
| TCTCTATGTAGATCACTCAC+GGG | + | chr7_3:74825458-74825477 | Msa1123840:intron | 40.0% | |
| GTCTACAACACGCATTTGTA+TGG | + | chr7_3:74825534-74825553 | Msa1123840:CDS | 40.0% | |
| AGAACTCAGGGAACCATTAT+TGG | - | chr7_3:74825600-74825619 | None:intergenic | 40.0% | |
| TGAAATACTTCTTCACAGGG+CGG | + | chr7_3:74825656-74825675 | Msa1123840:intron | 40.0% | |
| TGCTGGAGTTACAACATACT+TGG | - | chr7_3:74825688-74825707 | None:intergenic | 40.0% | |
| !! | TTCTGGTGTTGGTATTGCAA+TGG | + | chr7_3:74825716-74825735 | Msa1123840:CDS | 40.0% |
| GGTATTGCAATGGCAGTATA+TGG | + | chr7_3:74825726-74825745 | Msa1123840:CDS | 40.0% | |
| !! | TGTAATGGATGTGAGACCAA+AGG | - | chr7_3:74825940-74825959 | None:intergenic | 40.0% |
| !!! | TTCTTTTGGAGCTTTTGCTC+AGG | + | chr7_3:74825968-74825987 | Msa1123840:CDS | 40.0% |
| ATATACGTCAGCCAAACAAC+AGG | - | chr7_3:74826040-74826059 | None:intergenic | 40.0% | |
| ! | AGCATATCCAGTGGATTTGT+TGG | + | chr7_3:74826124-74826143 | Msa1123840:intron | 40.0% |
| CAGCGAAATAAAAGGGTAGA+TGG | - | chr7_3:74826264-74826283 | None:intergenic | 40.0% | |
| TAGCATGTTAGCACTTAGCA+AGG | - | chr7_3:74826316-74826335 | None:intergenic | 40.0% | |
| ACTGCTTGGAACGAAATGTA+CGG | - | chr7_3:74826624-74826643 | None:intergenic | 40.0% | |
| TTCGTTCCAAGCAGTTATCA+TGG | + | chr7_3:74826629-74826648 | Msa1123840:CDS | 40.0% | |
| ACATGACCATGATAACTGCT+TGG | - | chr7_3:74826638-74826657 | None:intergenic | 40.0% | |
| CACACGCTAGACAATGTGAT+TGG | - | chr7_3:74822912-74822931 | None:intergenic | 45.0% | |
| TCTCAATTGCTCCGGTTTCT+AGG | - | chr7_3:74823060-74823079 | None:intergenic | 45.0% | |
| ! | ATCTGGAGTCTCAATTGCTC+CGG | - | chr7_3:74823068-74823087 | None:intergenic | 45.0% |
| ATTTGGGTACGACTTCGCTT+GGG | + | chr7_3:74823314-74823333 | Msa1123840:CDS | 45.0% | |
| CGGATCCAAGAATGCTTTGA+TGG | + | chr7_3:74823396-74823415 | Msa1123840:CDS | 45.0% | |
| ! | GCTTTGATGGTTGGAACTTC+TGG | + | chr7_3:74823409-74823428 | Msa1123840:CDS | 45.0% |
| CTGCAAACTTGAAGCCCAAT+TGG | + | chr7_3:74823449-74823468 | Msa1123840:CDS | 45.0% | |
| CGCACTTGCAGTTACCAATT+GGG | - | chr7_3:74823466-74823485 | None:intergenic | 45.0% | |
| CCTGCATAACAGTCACTCAA+TGG | - | chr7_3:74824338-74824357 | None:intergenic | 45.0% | |
| CCATTGAGTGACTGTTATGC+AGG | + | chr7_3:74824335-74824354 | Msa1123840:intron | 45.0% | |
| TTCCGGCTTCTGTGTATCTT+GGG | + | chr7_3:74824368-74824387 | Msa1123840:CDS | 45.0% | |
| AACCCAAGATACACAGAAGC+CGG | - | chr7_3:74824373-74824392 | None:intergenic | 45.0% | |
| TGATCTTCGATTGACCTGTC+AGG | + | chr7_3:74824485-74824504 | Msa1123840:intron | 45.0% | |
| GATCTTCGATTGACCTGTCA+GGG | + | chr7_3:74824486-74824505 | Msa1123840:intron | 45.0% | |
| ! | TTCCACGAAGGTGCAGTAAT+TGG | + | chr7_3:74824555-74824574 | Msa1123840:CDS | 45.0% |
| TGACTTCAACGGAGAGTTCT+GGG | + | chr7_3:74824578-74824597 | Msa1123840:CDS | 45.0% | |
| GGGTGTATACACACTTCATC+AGG | + | chr7_3:74824599-74824618 | Msa1123840:CDS | 45.0% | |
| TTTCCATGTTTACGCGCTCT+TGG | + | chr7_3:74824856-74824875 | Msa1123840:intron | 45.0% | |
| ACTTGGTCATTGCCACAACA+TGG | - | chr7_3:74825028-74825047 | None:intergenic | 45.0% | |
| ! | TGGTTTGCCAACAAAGGTCT+AGG | + | chr7_3:74825094-74825113 | Msa1123840:intron | 45.0% |
| GCAAACACCTAGACCTTTGT+TGG | - | chr7_3:74825104-74825123 | None:intergenic | 45.0% | |
| TCGTTTCTCATCACTGTAGG+AGG | + | chr7_3:74825280-74825299 | Msa1123840:intron | 45.0% | |
| CGTTTCTCATCACTGTAGGA+GGG | + | chr7_3:74825281-74825300 | Msa1123840:intron | 45.0% | |
| CAAGGGAGGATACAAGCATT+TGG | + | chr7_3:74825403-74825422 | Msa1123840:CDS | 45.0% | |
| GGATACAAGCATTTGGATGC+CGG | + | chr7_3:74825410-74825429 | Msa1123840:CDS | 45.0% | |
| ! | ACTCCAGCAATTGGTGTTTC+TGG | + | chr7_3:74825699-74825718 | Msa1123840:CDS | 45.0% |
| ACACCAGAAACACCAATTGC+TGG | - | chr7_3:74825705-74825724 | None:intergenic | 45.0% | |
| !! | GCAATTGGTGTTTCTGGTGT+TGG | + | chr7_3:74825705-74825724 | Msa1123840:CDS | 45.0% |
| ! | GCAGTATATGGGGCTTTTGA+TGG | + | chr7_3:74825738-74825757 | Msa1123840:CDS | 45.0% |
| CAAAACTGTAGTTCCTTGGG+TGG | + | chr7_3:74825785-74825804 | Msa1123840:intron | 45.0% | |
| TTCTGATGCAGCATATCCAG+TGG | + | chr7_3:74826115-74826134 | Msa1123840:intron | 45.0% | |
| ! | TTGGCTGCTTTATTGGGCAT+TGG | + | chr7_3:74826166-74826185 | Msa1123840:CDS | 45.0% |
| !! | GCTTTATTGGGCATTGGTGA+TGG | + | chr7_3:74826172-74826191 | Msa1123840:CDS | 45.0% |
| ACGCAGCTCAATGCTTTACT+AGG | + | chr7_3:74826205-74826224 | Msa1123840:CDS | 45.0% | |
| TAATACTTTGCGGTGCAGGA+AGG | + | chr7_3:74826537-74826556 | Msa1123840:intron | 45.0% | |
| AATACTTTGCGGTGCAGGAA+GGG | + | chr7_3:74826538-74826557 | Msa1123840:intron | 45.0% | |
| TGCTTGGAACGAAATGTACG+GGG | - | chr7_3:74826622-74826641 | None:intergenic | 45.0% | |
| CTGCTTGGAACGAAATGTAC+GGG | - | chr7_3:74826623-74826642 | None:intergenic | 45.0% | |
| ! | TTTATGGTTGGCTCTCAAGG+TGG | + | chr7_3:74826689-74826708 | Msa1123840:CDS | 45.0% |
| ! | TTATGGTTGGCTCTCAAGGT+GGG | + | chr7_3:74826690-74826709 | Msa1123840:CDS | 45.0% |
| AATTCACTCACTGGTGGAGA+GGG | - | chr7_3:74826727-74826746 | None:intergenic | 45.0% | |
| AAATTCACTCACTGGTGGAG+AGG | - | chr7_3:74826728-74826747 | None:intergenic | 45.0% | |
| CTGAAGGAAATGTGCCGTAT+AGG | - | chr7_3:74826784-74826803 | None:intergenic | 45.0% | |
| ! | TGCTCCGGTTTCTAGGTTGT+TGG | - | chr7_3:74823053-74823072 | None:intergenic | 50.0% |
| GATTTGGGTACGACTTCGCT+TGG | + | chr7_3:74823313-74823332 | Msa1123840:CDS | 50.0% | |
| !! | TCTTTGGTGGTGCGGATTCT+CGG | + | chr7_3:74823376-74823395 | Msa1123840:CDS | 50.0% |
| GCGCACTTGCAGTTACCAAT+TGG | - | chr7_3:74823467-74823486 | None:intergenic | 50.0% | |
| ACCTGACAGCAGTGACTACA+TGG | + | chr7_3:74823831-74823850 | Msa1123840:intron | 50.0% | |
| TCCATGTAGTCACTGCTGTC+AGG | - | chr7_3:74823835-74823854 | None:intergenic | 50.0% | |
| TGACAGCAGTGACTACATGG+AGG | + | chr7_3:74823834-74823853 | Msa1123840:intron | 50.0% | |
| GTTCCGGCTTCTGTGTATCT+TGG | + | chr7_3:74824367-74824386 | Msa1123840:CDS | 50.0% | |
| TATAGCATGACTGCGTGCAG+TGG | - | chr7_3:74824526-74824545 | None:intergenic | 50.0% | |
| CACCAATTACTGCACCTTCG+TGG | - | chr7_3:74824560-74824579 | None:intergenic | 50.0% | |
| GTGACTTCAACGGAGAGTTC+TGG | + | chr7_3:74824577-74824596 | Msa1123840:CDS | 50.0% | |
| GACTTCAACGGAGAGTTCTG+GGG | + | chr7_3:74824579-74824598 | Msa1123840:CDS | 50.0% | |
| ! | CAACCAAGAGCGCGTAAACA+TGG | - | chr7_3:74824862-74824881 | None:intergenic | 50.0% |
| CATGTTTACGCGCTCTTGGT+TGG | + | chr7_3:74824860-74824879 | Msa1123840:intron | 50.0% | |
| !! | CTGTAGGAGGGAAGTACCAA+TGG | + | chr7_3:74825293-74825312 | Msa1123840:intron | 50.0% |
| AACTGTAGTTCCTTGGGTGG+TGG | + | chr7_3:74825788-74825807 | Msa1123840:intron | 50.0% | |
| ! | CACTTTTGAACCACCACCCA+AGG | - | chr7_3:74825801-74825820 | None:intergenic | 50.0% |
| ATACTTTGCGGTGCAGGAAG+GGG | + | chr7_3:74826539-74826558 | Msa1123840:intron | 50.0% | |
| ! | GCAGAGCGCTACAATTGCTA+CGG | + | chr7_3:74826584-74826603 | Msa1123840:CDS | 50.0% |
| ! | TATGGTTGGCTCTCAAGGTG+GGG | + | chr7_3:74826691-74826710 | Msa1123840:CDS | 50.0% |
| CTAACGGCGTTTCTTCGTCG+CGG | - | chr7_3:74822651-74822670 | None:intergenic | 55.0% | |
| AGACTCCAGATGACGTAGCG+TGG | + | chr7_3:74823077-74823096 | Msa1123840:intron | 55.0% | |
| GACTCCAGATGACGTAGCGT+GGG | + | chr7_3:74823078-74823097 | Msa1123840:intron | 55.0% | |
| ATGACCCACGCTACGTCATC+TGG | - | chr7_3:74823085-74823104 | None:intergenic | 55.0% | |
| ! | TGGGCTTCAAGTTTGCAGCC+AGG | - | chr7_3:74823447-74823466 | None:intergenic | 55.0% |
| GCAGTGACTACATGGAGGCT+TGG | + | chr7_3:74823839-74823858 | Msa1123840:intron | 55.0% | |
| CTACAGGGGCCAATCCTTCA+TGG | - | chr7_3:74824099-74824118 | None:intergenic | 55.0% | |
| !! | TGCTCTACTCAGTGATGGGC+AGG | + | chr7_3:74824760-74824779 | Msa1123840:CDS | 55.0% |
| !! | CTCAGTGATGGGCAGGTATG+TGG | + | chr7_3:74824767-74824786 | Msa1123840:intron | 55.0% |
| !! | AGTGATGGGCAGGTATGTGG+TGG | + | chr7_3:74824770-74824789 | Msa1123840:intron | 55.0% |
| CGGGGTGATAATAGCAAGGG+AGG | + | chr7_3:74825389-74825408 | Msa1123840:CDS | 55.0% | |
| GGACTTTCATTCACCAGCGC+CGG | - | chr7_3:74825432-74825451 | None:intergenic | 55.0% | |
| AAGCATTTGGATGCCGGCGC+TGG | + | chr7_3:74825416-74825435 | Msa1123840:CDS | 60.0% | |
| TGCCAGTGTTCTCTGGTCGC+TGG | + | chr7_3:74825906-74825925 | Msa1123840:intron | 60.0% | |
| GACCAGCGACCAGAGAACAC+TGG | - | chr7_3:74825911-74825930 | None:intergenic | 60.0% | |
| GTCGCTGGTCGTCTCACCTT+TGG | + | chr7_3:74825921-74825940 | Msa1123840:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 74822436 | 74826917 | 74822436 | ID=Msa1123840;Name=Msa1123840 |
| chr7_3 | mRNA | 74822436 | 74826917 | 74822436 | ID=Msa1123840-mRNA-1;Parent=Msa1123840;Name=Msa1123840-mRNA-1;_AED=0.32;_eAED=0.32;_QI=192|0.9|0.81|1|1|1|11|174|412 |
| chr7_3 | exon | 74822436 | 74822801 | 74822436 | ID=Msa1123840-mRNA-1:exon:20044;Parent=Msa1123840-mRNA-1 |
| chr7_3 | exon | 74823307 | 74823470 | 74823307 | ID=Msa1123840-mRNA-1:exon:20045;Parent=Msa1123840-mRNA-1 |
| chr7_3 | exon | 74824357 | 74824420 | 74824357 | ID=Msa1123840-mRNA-1:exon:20046;Parent=Msa1123840-mRNA-1 |
| chr7_3 | exon | 74824507 | 74824620 | 74824507 | ID=Msa1123840-mRNA-1:exon:20047;Parent=Msa1123840-mRNA-1 |
| chr7_3 | exon | 74824737 | 74824781 | 74824737 | ID=Msa1123840-mRNA-1:exon:20048;Parent=Msa1123840-mRNA-1 |
| chr7_3 | exon | 74825299 | 74825437 | 74825299 | ID=Msa1123840-mRNA-1:exon:20049;Parent=Msa1123840-mRNA-1 |
| chr7_3 | exon | 74825534 | 74825555 | 74825534 | ID=Msa1123840-mRNA-1:exon:20050;Parent=Msa1123840-mRNA-1 |
| chr7_3 | exon | 74825674 | 74825764 | 74825674 | ID=Msa1123840-mRNA-1:exon:20051;Parent=Msa1123840-mRNA-1 |
| chr7_3 | exon | 74825912 | 74826024 | 74825912 | ID=Msa1123840-mRNA-1:exon:20052;Parent=Msa1123840-mRNA-1 |
| chr7_3 | exon | 74826126 | 74826249 | 74826126 | ID=Msa1123840-mRNA-1:exon:20053;Parent=Msa1123840-mRNA-1 |
| chr7_3 | exon | 74826555 | 74826917 | 74826555 | ID=Msa1123840-mRNA-1:exon:20054;Parent=Msa1123840-mRNA-1 |
| chr7_3 | five_prime_UTR | 74822436 | 74822627 | 74822436 | ID=Msa1123840-mRNA-1:five_prime_utr;Parent=Msa1123840-mRNA-1 |
| chr7_3 | CDS | 74822628 | 74822801 | 74822628 | ID=Msa1123840-mRNA-1:cds;Parent=Msa1123840-mRNA-1 |
| chr7_3 | CDS | 74823307 | 74823470 | 74823307 | ID=Msa1123840-mRNA-1:cds;Parent=Msa1123840-mRNA-1 |
| chr7_3 | CDS | 74824357 | 74824420 | 74824357 | ID=Msa1123840-mRNA-1:cds;Parent=Msa1123840-mRNA-1 |
| chr7_3 | CDS | 74824507 | 74824620 | 74824507 | ID=Msa1123840-mRNA-1:cds;Parent=Msa1123840-mRNA-1 |
| chr7_3 | CDS | 74824737 | 74824781 | 74824737 | ID=Msa1123840-mRNA-1:cds;Parent=Msa1123840-mRNA-1 |
| chr7_3 | CDS | 74825299 | 74825437 | 74825299 | ID=Msa1123840-mRNA-1:cds;Parent=Msa1123840-mRNA-1 |
| chr7_3 | CDS | 74825534 | 74825555 | 74825534 | ID=Msa1123840-mRNA-1:cds;Parent=Msa1123840-mRNA-1 |
| chr7_3 | CDS | 74825674 | 74825764 | 74825674 | ID=Msa1123840-mRNA-1:cds;Parent=Msa1123840-mRNA-1 |
| chr7_3 | CDS | 74825912 | 74826024 | 74825912 | ID=Msa1123840-mRNA-1:cds;Parent=Msa1123840-mRNA-1 |
| chr7_3 | CDS | 74826126 | 74826249 | 74826126 | ID=Msa1123840-mRNA-1:cds;Parent=Msa1123840-mRNA-1 |
| chr7_3 | CDS | 74826555 | 74826743 | 74826555 | ID=Msa1123840-mRNA-1:cds;Parent=Msa1123840-mRNA-1 |
| chr7_3 | three_prime_UTR | 74826744 | 74826917 | 74826744 | ID=Msa1123840-mRNA-1:three_prime_utr;Parent=Msa1123840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
