AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1129260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1129260 MtrunA17_Chr7g0273941 85.455 495 36 9 1 487 17 483 0.0 763
Msa1129260 MtrunA17_Chr1g0190851 45.850 506 203 18 32 492 34 513 3.22e-110 338
Msa1129260 MtrunA17_Chr2g0290511 31.250 256 137 9 245 481 114 349 1.41e-30 122
Msa1129260 MtrunA17_Chr6g0463941 55.238 105 38 2 385 489 464 559 1.04e-28 120
Msa1129260 MtrunA17_Chr6g0463941 41.837 98 47 2 385 482 55 142 5.78e-16 80.9
Msa1129260 MtrunA17_Chr1g0201941 43.750 96 44 2 385 480 57 142 9.72e-17 83.6
Msa1129260 MtrunA17_Chr1g0201941 35.227 88 48 2 233 317 274 355 8.87e-11 64.7
Msa1129260 MtrunA17_Chr1g0201911 42.424 99 47 2 385 483 55 143 1.15e-15 79.7
Msa1129260 MtrunA17_Chr7g0265831 39.000 100 50 3 385 483 115 204 6.21e-14 73.9
Msa1129260 MtrunA17_Chr7g0265831 24.542 273 160 8 86 317 96 363 9.81e-11 63.9
Msa1129260 MtrunA17_Chr1g0198171 42.268 97 45 3 385 480 114 200 1.03e-13 73.6
Msa1129260 MtrunA17_Chr1g0179191 38.462 104 53 3 385 487 131 224 4.44e-13 71.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1129260 AT5G28300.1 40.842 475 168 16 103 483 103 558 6.80e-75 249
Msa1129260 AT1G76890.2 37.363 273 135 9 220 484 243 487 5.80e-40 153
Msa1129260 AT1G76890.2 36.111 144 76 4 385 522 41 174 5.25e-16 81.3
Msa1129260 AT1G33240.2 34.444 270 132 8 244 481 227 483 1.14e-30 126
Msa1129260 AT1G33240.3 34.444 270 132 8 244 481 266 522 1.20e-30 126
Msa1129260 AT1G33240.3 42.708 96 45 2 385 480 62 147 4.68e-17 84.7
Msa1129260 AT1G76880.1 54.000 100 37 2 385 484 408 498 5.92e-27 115
Msa1129260 AT1G76880.1 41.071 112 52 3 376 483 48 149 9.39e-17 84.0
Msa1129260 AT1G33240.1 56.701 97 33 3 385 481 435 522 9.00e-26 112
Msa1129260 AT1G33240.1 42.708 96 45 2 385 480 62 147 3.99e-17 85.1
Msa1129260 AT5G47660.1 30.672 238 137 7 245 481 178 388 2.55e-25 108
Msa1129260 AT3G10000.1 40.000 100 50 3 385 483 88 178 1.64e-14 76.3
Msa1129260 AT5G03680.1 38.384 99 50 3 385 482 119 207 2.13e-13 73.2
Msa1129260 AT5G03680.1 26.800 250 149 11 234 475 284 507 9.51e-12 68.2
Msa1129260 AT3G10000.2 36.364 99 45 3 385 483 88 168 5.74e-12 68.6

Find 124 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATTATTTATGGCTTATT+AGG 0.131965 7_3:+81280534 Msa1129260:five_prime_UTR
AGATTGTTACAAGGATTATT+AGG 0.181963 7_3:-81281820 None:intergenic
AGAAGAAGTAGAGGGAATTA+AGG 0.209713 7_3:-81280853 None:intergenic
TTAGATCACGTTGAAAATTA+TGG 0.221677 7_3:+81282708 Msa1129260:three_prime_UTR
CTTTGTACATTTGCGATATC+TGG 0.223312 7_3:+81282658 Msa1129260:three_prime_UTR
GTTGATTGAATTAGAATTAA+AGG 0.228543 7_3:-81280979 None:intergenic
TGATCAACGGTGGTGGAGTT+TGG 0.283034 7_3:-81281010 None:intergenic
TCTAATTTCTCCATTATTGT+AGG 0.283920 7_3:-81281937 None:intergenic
CCTTGTTGTGCCTACAATAA+TGG 0.294174 7_3:+81281927 Msa1129260:CDS
GAACTGAGTTGATGAAAATA+AGG 0.325543 7_3:-81282231 None:intergenic
TACAATATGACCATTTGAAT+TGG 0.335962 7_3:-81282322 None:intergenic
GTTGAAGGAAATAGTAATAA+AGG 0.341852 7_3:+81282048 Msa1129260:CDS
ATGCGTCATAGAGATCAATT+TGG 0.343924 7_3:+81280464 None:intergenic
GATTGTTACAAGGATTATTA+GGG 0.345761 7_3:-81281819 None:intergenic
TCTGCTATCACATTAGAAAA+AGG 0.348185 7_3:-81281856 None:intergenic
GAATTAAAGGTAGTGGTGTT+AGG 0.362917 7_3:-81280966 None:intergenic
TGCAGTAAGCTAGCTGAGTT+TGG 0.364718 7_3:+81281214 Msa1129260:intron
AGGAGTACTACTAGTCTTCT+TGG 0.365345 7_3:+81280780 Msa1129260:CDS
CGAATCATCTTCTTCGTGTT+GGG 0.376149 7_3:-81281422 None:intergenic
CTTGGTGACTGATGGGAGGA+TGG 0.379091 7_3:+81282597 Msa1129260:three_prime_UTR
GTTGGATGTTTGGTTAATTG+AGG 0.388574 7_3:-81282297 None:intergenic
TGAATTGGAGGTTGGATGTT+TGG 0.388613 7_3:-81282307 None:intergenic
GATCAACGGTGGTGGAGTTT+GGG 0.391573 7_3:-81281009 None:intergenic
CTTCTAAACAAAGCTAAAAG+AGG 0.407587 7_3:+81280589 Msa1129260:five_prime_UTR
TACAATAATGGAGAAATTAG+AGG 0.413562 7_3:+81281939 Msa1129260:CDS
GAAGAAGTAGAGGGAATTAA+GGG 0.418831 7_3:-81280852 None:intergenic
CAGTCTTCTGATTCTCCAAT+GGG 0.423197 7_3:+81282363 Msa1129260:CDS
GTCGTCATCATCACAGTGTT+TGG 0.428860 7_3:-81281464 None:intergenic
TGGGGCAATGATAGTATTGA+TGG 0.430799 7_3:-81280936 None:intergenic
TCGAATCATCTTCTTCGTGT+TGG 0.432686 7_3:-81281423 None:intergenic
TTGGTGACTGATGGGAGGAT+GGG 0.436472 7_3:+81282598 Msa1129260:three_prime_UTR
TCCCATGTGATGAGTTGATC+TGG 0.439124 7_3:-81281104 None:intergenic
CTCTGAAGGGATGTTTGAGT+TGG 0.442279 7_3:+81282089 Msa1129260:CDS
TCAACATTTCAAATCTATCA+AGG 0.442340 7_3:-81281531 None:intergenic
CTTGAAGATCACTAACAAAC+CGG 0.444929 7_3:-81281333 None:intergenic
GTTCAAGAATTCAATGATGT+TGG 0.446172 7_3:-81281743 None:intergenic
TGGTGACTGATGGGAGGATG+GGG 0.447305 7_3:+81282599 Msa1129260:three_prime_UTR
AAGTTCGTCGTTAGTCCAGC+TGG 0.453547 7_3:-81281039 None:intergenic
ATGATGAGGAGAATGAGAAT+TGG 0.461876 7_3:-81280877 None:intergenic
AGAAGCAACAATAATGTTGA+AGG 0.463341 7_3:+81282033 Msa1129260:CDS
TACTCTGTGTCACTTGAGCT+AGG 0.463574 7_3:-81281886 None:intergenic
AATATGACCATTTGAATTGG+AGG 0.468145 7_3:-81282319 None:intergenic
AGAAAAGGTCAACGGATTCA+AGG 0.478087 7_3:+81282202 Msa1129260:CDS
GATCTTCAAGATCTTTATCA+AGG 0.479140 7_3:+81281346 Msa1129260:CDS
TGAATTAGAATTAAAGGTAG+TGG 0.482460 7_3:-81280973 None:intergenic
ATTATTTATGGCTTATTAGG+AGG 0.485768 7_3:+81280537 Msa1129260:five_prime_UTR
GAAGAGTGCTCAAAATTGTA+AGG 0.485968 7_3:+81281243 Msa1129260:CDS
ACGGTGGTGGAGTTTGGGTC+TGG 0.489580 7_3:-81281004 None:intergenic
CATCCAACCTCCAATTCAAA+TGG 0.490841 7_3:+81282312 Msa1129260:CDS
TAGTAATAAAGGACCTTTGT+GGG 0.496078 7_3:+81282059 Msa1129260:CDS
AGAATTGGAAGAAGAAGTAG+AGG 0.498292 7_3:-81280862 None:intergenic
TCAAGAAAAGCTTGCTAGAG+AGG 0.499159 7_3:+81281642 Msa1129260:CDS
TAATGGAGAAATTAGAGGAT+AGG 0.500977 7_3:+81281944 Msa1129260:CDS
AGTGCCAACACTTCATCTCT+TGG 0.501001 7_3:-81281976 None:intergenic
AGAAATTAGAGGATAGGAGA+AGG 0.501494 7_3:+81281950 Msa1129260:CDS
TCTGAAGGGATGTTTGAGTT+GGG 0.503163 7_3:+81282090 Msa1129260:CDS
AGTGGTGTTAGGAGAGTGGT+GGG 0.504430 7_3:-81280955 None:intergenic
CACGGACAGAATGATAGTTA+AGG 0.507146 7_3:-81282746 None:intergenic
TGACCATTTGAATTGGAGGT+TGG 0.512037 7_3:-81282315 None:intergenic
TCAGTCTTCTGATTCTCCAA+TGG 0.512323 7_3:+81282362 Msa1129260:CDS
CTAAAAGAGGAGAGTGTTGT+GGG 0.514492 7_3:+81280602 Msa1129260:five_prime_UTR
TTGTTGTGAATAAGAAGAAA+AGG 0.514743 7_3:+81282187 Msa1129260:CDS
TAGAGGGAATTAAGGGTATG+TGG 0.520931 7_3:-81280845 None:intergenic
ATAGTATTGATGGGTGGAAG+AGG 0.526228 7_3:-81280926 None:intergenic
GAATCGATGATCAACGGTGG+TGG 0.526899 7_3:-81281017 None:intergenic
CGTTGATCATCGATTCCAGC+TGG 0.533603 7_3:+81281024 Msa1129260:CDS
GCAGTAAGCTAGCTGAGTTT+GGG 0.534684 7_3:+81281215 Msa1129260:intron
CAAGATCTTTATCAAGGTGG+TGG 0.535018 7_3:+81281352 Msa1129260:CDS
GCAAACATGTTGGATGAAAG+AGG 0.537737 7_3:+81280732 Msa1129260:exon
ATAAGCAGATGGTGAATTCA+CGG 0.538169 7_3:-81282764 None:intergenic
CCATTATTGTAGGCACAACA+AGG 0.538540 7_3:-81281927 None:intergenic
TCGCAAATGTACAAAGAAGT+AGG 0.540633 7_3:-81282651 None:intergenic
ACTCTGTGTCACTTGAGCTA+GGG 0.543713 7_3:-81281885 None:intergenic
AGGTTTGTTTGAGTTTGAAG+TGG 0.545574 7_3:-81280906 None:intergenic
TGATGACGACAAGGTGATGA+TGG 0.550605 7_3:+81281477 Msa1129260:CDS
AGGTAGTGGTGTTAGGAGAG+TGG 0.552440 7_3:-81280959 None:intergenic
TCGTATTTATACTACCCCAT+TGG 0.554200 7_3:-81282378 None:intergenic
TAGTGGTGTTAGGAGAGTGG+TGG 0.563193 7_3:-81280956 None:intergenic
AGCTTGCTAGAGAGGAAGCA+TGG 0.569276 7_3:+81281650 Msa1129260:CDS
TGCATGTAGAGTAGTAGAGC+TGG 0.574850 7_3:+81280672 Msa1129260:five_prime_UTR
TTGTGGGAGAGAATCTCTGA+AGG 0.575460 7_3:+81282075 Msa1129260:CDS
ATAGTAATAAAGGACCTTTG+TGG 0.578204 7_3:+81282058 Msa1129260:CDS
TCCCAGATCAACTCATCACA+TGG 0.578469 7_3:+81281102 Msa1129260:CDS
CATGCAATCAGTGAATTAGC+CGG 0.579088 7_3:+81282425 Msa1129260:three_prime_UTR
TAACACTTGTAGTAGACTTG+AGG 0.580589 7_3:-81282005 None:intergenic
GAATCAGAAGACTGAGCTTG+AGG 0.581830 7_3:-81282354 None:intergenic
TTGAACAAATATCTAGCCAC+AGG 0.583846 7_3:+81281760 Msa1129260:CDS
AGGCACAACAAGGGTAGAAG+TGG 0.586674 7_3:-81281917 None:intergenic
ATCTGGGAAGAAATTGTGAA+TGG 0.587163 7_3:-81281087 None:intergenic
AATTAAGGGTATGTGGTGGA+AGG 0.587264 7_3:-81280838 None:intergenic
CCCATGTGATGAGTTGATCT+GGG 0.588059 7_3:-81281103 None:intergenic
AGAGGTGGTAGCAAACATGT+TGG 0.589579 7_3:+81280722 Msa1129260:exon
TTTGATTTAAGATTGTTACA+AGG 0.590503 7_3:-81281829 None:intergenic
GCTAAAAGAGGAGAGTGTTG+TGG 0.597554 7_3:+81280601 Msa1129260:five_prime_UTR
GACAAACGAGAGAGAAAGAG+AGG 0.599365 7_3:+81280636 Msa1129260:five_prime_UTR
TTGAAGATCACTAACAAACC+GGG 0.601696 7_3:-81281332 None:intergenic
TCAGAAGACTGAGCTTGAGG+TGG 0.606482 7_3:-81282351 None:intergenic
GTGGCCAAGAGATGAAGTGT+TGG 0.612713 7_3:+81281972 Msa1129260:CDS
TGAAGTGGAAATTGATGATG+AGG 0.617387 7_3:-81280891 None:intergenic
CTTCAAGATCTTTATCAAGG+TGG 0.622674 7_3:+81281349 Msa1129260:CDS
TCACATGGGACCATGTCTCA+AGG 0.623811 7_3:+81281117 Msa1129260:CDS
GATTGAAAGGATGAACATGA+TGG 0.625916 7_3:+81281684 Msa1129260:CDS
AATTAGAGGATAGGAGAAGG+TGG 0.625991 7_3:+81281953 Msa1129260:CDS
AGGGAATTAAGGGTATGTGG+TGG 0.633033 7_3:-81280842 None:intergenic
TAATTACGTACCTTGAGACA+TGG 0.636193 7_3:-81281127 None:intergenic
TTTGCTTGGTGACTGATGGG+AGG 0.636516 7_3:+81282593 Msa1129260:three_prime_UTR
ATAATGATAATAATTTCCCC+CGG 0.637802 7_3:+81281314 Msa1129260:CDS
CAGCTGGAATCGATGATCAA+CGG 0.638993 7_3:-81281023 None:intergenic
GAATAAGAAGAAAAGGTCAA+CGG 0.648790 7_3:+81282194 Msa1129260:CDS
TCAGAGATTCTCTCCCACAA+AGG 0.658578 7_3:-81282072 None:intergenic
TGAAGATCACTAACAAACCG+GGG 0.660207 7_3:-81281331 None:intergenic
GGGGCAATGATAGTATTGAT+GGG 0.665761 7_3:-81280935 None:intergenic
TGTGGGAGAGAATCTCTGAA+GGG 0.668713 7_3:+81282076 Msa1129260:CDS
CCCAGATCAACTCATCACAT+GGG 0.681423 7_3:+81281103 Msa1129260:CDS
CATTATTGTAGGCACAACAA+GGG 0.683728 7_3:-81281926 None:intergenic
GAATTGGAAGAAGAAGTAGA+GGG 0.683768 7_3:-81280861 None:intergenic
GCAATGATAGTATTGATGGG+TGG 0.685120 7_3:-81280932 None:intergenic
GATACAAGAGAAGTGCAAAG+AGG 0.707168 7_3:+81282112 Msa1129260:CDS
AGTCTTCTGATTCTCCAATG+GGG 0.718372 7_3:+81282364 Msa1129260:CDS
GAAGATCACTAACAAACCGG+GGG 0.720209 7_3:-81281330 None:intergenic
GTGGTGTTAGGAGAGTGGTG+GGG 0.721834 7_3:-81280954 None:intergenic
CTGGAATCGATGATCAACGG+TGG 0.722514 7_3:-81281020 None:intergenic
AGAAGAAGAAGAATATCCTG+TGG 0.722719 7_3:-81281776 None:intergenic
ACACTGTGATGATGACGACA+AGG 0.746516 7_3:+81281468 Msa1129260:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATTATTTATGGCTTATT+AGG + chr7_3:81280534-81280553 Msa1129260:five_prime_UTR 15.0%
!!! TAAGTATTTTAAAAAGACAA+AGG + chr7_3:81282161-81282180 Msa1129260:CDS 15.0%
!! AAAATTATTTATGGCTTATT+AGG + chr7_3:81280534-81280553 Msa1129260:five_prime_UTR 15.0%
!!! TAAGTATTTTAAAAAGACAA+AGG + chr7_3:81282161-81282180 Msa1129260:CDS 15.0%
!! CGTCACAAAAAAATTATTTA+TGG + chr7_3:81280525-81280544 Msa1129260:five_prime_UTR 20.0%
!! GTTGATTGAATTAGAATTAA+AGG - chr7_3:81280982-81281001 None:intergenic 20.0%
!! ATAAATGTTTCATTGATCTT+TGG + chr7_3:81281163-81281182 Msa1129260:intron 20.0%
!!! TTTGATTTAAGATTGTTACA+AGG - chr7_3:81281832-81281851 None:intergenic 20.0%
!!! TCAAAAATATATTTTCTCAC+CGG - chr7_3:81282447-81282466 None:intergenic 20.0%
!! AGTCCAAAAAATTATTAAAG+GGG - chr7_3:81282475-81282494 None:intergenic 20.0%
!! GAGTCCAAAAAATTATTAAA+GGG - chr7_3:81282476-81282495 None:intergenic 20.0%
!! AGAGTCCAAAAAATTATTAA+AGG - chr7_3:81282477-81282496 None:intergenic 20.0%
!!! TTTTGATGGAAGAAAAAAAT+GGG - chr7_3:81282529-81282548 None:intergenic 20.0%
!!! ATTTTGATGGAAGAAAAAAA+TGG - chr7_3:81282530-81282549 None:intergenic 20.0%
!!! AGTTGAACTAATTATTTTGA+TGG - chr7_3:81282543-81282562 None:intergenic 20.0%
!!! TTCTTTTTAATTGTTTTGCT+TGG + chr7_3:81282579-81282598 Msa1129260:three_prime_UTR 20.0%
!! CGTCACAAAAAAATTATTTA+TGG + chr7_3:81280525-81280544 Msa1129260:five_prime_UTR 20.0%
!! GTTGATTGAATTAGAATTAA+AGG - chr7_3:81280982-81281001 None:intergenic 20.0%
!! ATAAATGTTTCATTGATCTT+TGG + chr7_3:81281163-81281182 Msa1129260:intron 20.0%
!!! TTTGATTTAAGATTGTTACA+AGG - chr7_3:81281832-81281851 None:intergenic 20.0%
!!! TCAAAAATATATTTTCTCAC+CGG - chr7_3:81282447-81282466 None:intergenic 20.0%
!! AGTCCAAAAAATTATTAAAG+GGG - chr7_3:81282475-81282494 None:intergenic 20.0%
!! GAGTCCAAAAAATTATTAAA+GGG - chr7_3:81282476-81282495 None:intergenic 20.0%
!! AGAGTCCAAAAAATTATTAA+AGG - chr7_3:81282477-81282496 None:intergenic 20.0%
!!! TTTTGATGGAAGAAAAAAAT+GGG - chr7_3:81282529-81282548 None:intergenic 20.0%
!!! ATTTTGATGGAAGAAAAAAA+TGG - chr7_3:81282530-81282549 None:intergenic 20.0%
!!! AGTTGAACTAATTATTTTGA+TGG - chr7_3:81282543-81282562 None:intergenic 20.0%
!!! TTCTTTTTAATTGTTTTGCT+TGG + chr7_3:81282579-81282598 Msa1129260:three_prime_UTR 20.0%
! ATTATTTATGGCTTATTAGG+AGG + chr7_3:81280537-81280556 Msa1129260:five_prime_UTR 25.0%
!! ATTTTGAATTTGAGCAATTG+AGG + chr7_3:81280760-81280779 Msa1129260:CDS 25.0%
! TGAATTAGAATTAAAGGTAG+TGG - chr7_3:81280976-81280995 None:intergenic 25.0%
! ATAATGATAATAATTTCCCC+CGG + chr7_3:81281314-81281333 Msa1129260:CDS 25.0%
! AGAAATCAAAGAACAAAAAG+AGG + chr7_3:81281500-81281519 Msa1129260:CDS 25.0%
! TCAACATTTCAAATCTATCA+AGG - chr7_3:81281534-81281553 None:intergenic 25.0%
! GATTGTTACAAGGATTATTA+GGG - chr7_3:81281822-81281841 None:intergenic 25.0%
! AGATTGTTACAAGGATTATT+AGG - chr7_3:81281823-81281842 None:intergenic 25.0%
! TCTAATTTCTCCATTATTGT+AGG - chr7_3:81281940-81281959 None:intergenic 25.0%
!! TACAATAATGGAGAAATTAG+AGG + chr7_3:81281939-81281958 Msa1129260:CDS 25.0%
! GTTGAAGGAAATAGTAATAA+AGG + chr7_3:81282048-81282067 Msa1129260:CDS 25.0%
!! AAAGAGGTGTAAAGAAAAAT+GGG + chr7_3:81282128-81282147 Msa1129260:CDS 25.0%
! TTGTTGTGAATAAGAAGAAA+AGG + chr7_3:81282187-81282206 Msa1129260:CDS 25.0%
! TACAATATGACCATTTGAAT+TGG - chr7_3:81282325-81282344 None:intergenic 25.0%
!!! TTGCCCCTTTAATAATTTTT+TGG + chr7_3:81282469-81282488 Msa1129260:three_prime_UTR 25.0%
!!! AGTTTGAATTCGTTTTTACT+TGG + chr7_3:81282503-81282522 Msa1129260:three_prime_UTR 25.0%
! TTAGATCACGTTGAAAATTA+TGG + chr7_3:81282708-81282727 Msa1129260:three_prime_UTR 25.0%
! ATTATTTATGGCTTATTAGG+AGG + chr7_3:81280537-81280556 Msa1129260:five_prime_UTR 25.0%
!! ATTTTGAATTTGAGCAATTG+AGG + chr7_3:81280760-81280779 Msa1129260:CDS 25.0%
! TGAATTAGAATTAAAGGTAG+TGG - chr7_3:81280976-81280995 None:intergenic 25.0%
! ATAATGATAATAATTTCCCC+CGG + chr7_3:81281314-81281333 Msa1129260:CDS 25.0%
! AGAAATCAAAGAACAAAAAG+AGG + chr7_3:81281500-81281519 Msa1129260:CDS 25.0%
! TCAACATTTCAAATCTATCA+AGG - chr7_3:81281534-81281553 None:intergenic 25.0%
! GATTGTTACAAGGATTATTA+GGG - chr7_3:81281822-81281841 None:intergenic 25.0%
! AGATTGTTACAAGGATTATT+AGG - chr7_3:81281823-81281842 None:intergenic 25.0%
! TCTAATTTCTCCATTATTGT+AGG - chr7_3:81281940-81281959 None:intergenic 25.0%
!! TACAATAATGGAGAAATTAG+AGG + chr7_3:81281939-81281958 Msa1129260:CDS 25.0%
! GTTGAAGGAAATAGTAATAA+AGG + chr7_3:81282048-81282067 Msa1129260:CDS 25.0%
!! AAAGAGGTGTAAAGAAAAAT+GGG + chr7_3:81282128-81282147 Msa1129260:CDS 25.0%
! TTGTTGTGAATAAGAAGAAA+AGG + chr7_3:81282187-81282206 Msa1129260:CDS 25.0%
! TACAATATGACCATTTGAAT+TGG - chr7_3:81282325-81282344 None:intergenic 25.0%
!!! TTGCCCCTTTAATAATTTTT+TGG + chr7_3:81282469-81282488 Msa1129260:three_prime_UTR 25.0%
!!! AGTTTGAATTCGTTTTTACT+TGG + chr7_3:81282503-81282522 Msa1129260:three_prime_UTR 25.0%
! TTAGATCACGTTGAAAATTA+TGG + chr7_3:81282708-81282727 Msa1129260:three_prime_UTR 25.0%
! GATTTTGTGATGTGAAAAGA+GGG + chr7_3:81280486-81280505 Msa1129260:five_prime_UTR 30.0%
CTTCTAAACAAAGCTAAAAG+AGG + chr7_3:81280589-81280608 Msa1129260:five_prime_UTR 30.0%
GATCTTCAAGATCTTTATCA+AGG + chr7_3:81281346-81281365 Msa1129260:CDS 30.0%
GGAAAAAACAAGAGATTGAA+AGG + chr7_3:81281671-81281690 Msa1129260:CDS 30.0%
GTTCAAGAATTCAATGATGT+TGG - chr7_3:81281746-81281765 None:intergenic 30.0%
TCTGCTATCACATTAGAAAA+AGG - chr7_3:81281859-81281878 None:intergenic 30.0%
TAATGGAGAAATTAGAGGAT+AGG + chr7_3:81281944-81281963 Msa1129260:CDS 30.0%
AGAAGCAACAATAATGTTGA+AGG + chr7_3:81282033-81282052 Msa1129260:CDS 30.0%
ATAGTAATAAAGGACCTTTG+TGG + chr7_3:81282058-81282077 Msa1129260:CDS 30.0%
TAGTAATAAAGGACCTTTGT+GGG + chr7_3:81282059-81282078 Msa1129260:CDS 30.0%
! CAAAGAGGTGTAAAGAAAAA+TGG + chr7_3:81282127-81282146 Msa1129260:CDS 30.0%
GAATAAGAAGAAAAGGTCAA+CGG + chr7_3:81282194-81282213 Msa1129260:CDS 30.0%
!! GAACTGAGTTGATGAAAATA+AGG - chr7_3:81282234-81282253 None:intergenic 30.0%
AATATGACCATTTGAATTGG+AGG - chr7_3:81282322-81282341 None:intergenic 30.0%
ACATCACAAAATCCAAATTG+AGG - chr7_3:81280479-81280498 None:intergenic 30.0%
! GATTTTGTGATGTGAAAAGA+GGG + chr7_3:81280486-81280505 Msa1129260:five_prime_UTR 30.0%
CTTCTAAACAAAGCTAAAAG+AGG + chr7_3:81280589-81280608 Msa1129260:five_prime_UTR 30.0%
GATCTTCAAGATCTTTATCA+AGG + chr7_3:81281346-81281365 Msa1129260:CDS 30.0%
GGAAAAAACAAGAGATTGAA+AGG + chr7_3:81281671-81281690 Msa1129260:CDS 30.0%
GTTCAAGAATTCAATGATGT+TGG - chr7_3:81281746-81281765 None:intergenic 30.0%
TCTGCTATCACATTAGAAAA+AGG - chr7_3:81281859-81281878 None:intergenic 30.0%
TAATGGAGAAATTAGAGGAT+AGG + chr7_3:81281944-81281963 Msa1129260:CDS 30.0%
AGAAGCAACAATAATGTTGA+AGG + chr7_3:81282033-81282052 Msa1129260:CDS 30.0%
ATAGTAATAAAGGACCTTTG+TGG + chr7_3:81282058-81282077 Msa1129260:CDS 30.0%
TAGTAATAAAGGACCTTTGT+GGG + chr7_3:81282059-81282078 Msa1129260:CDS 30.0%
! CAAAGAGGTGTAAAGAAAAA+TGG + chr7_3:81282127-81282146 Msa1129260:CDS 30.0%
GAATAAGAAGAAAAGGTCAA+CGG + chr7_3:81282194-81282213 Msa1129260:CDS 30.0%
!! GAACTGAGTTGATGAAAATA+AGG - chr7_3:81282234-81282253 None:intergenic 30.0%
AATATGACCATTTGAATTGG+AGG - chr7_3:81282322-81282341 None:intergenic 30.0%
! GGATTTTGTGATGTGAAAAG+AGG + chr7_3:81280485-81280504 Msa1129260:five_prime_UTR 35.0%
GTAGCTGAGTTTGAAAAAAG+AGG + chr7_3:81280704-81280723 Msa1129260:five_prime_UTR 35.0%
GAAGAAGTAGAGGGAATTAA+GGG - chr7_3:81280855-81280874 None:intergenic 35.0%
AGAAGAAGTAGAGGGAATTA+AGG - chr7_3:81280856-81280875 None:intergenic 35.0%
GAATTGGAAGAAGAAGTAGA+GGG - chr7_3:81280864-81280883 None:intergenic 35.0%
AGAATTGGAAGAAGAAGTAG+AGG - chr7_3:81280865-81280884 None:intergenic 35.0%
ATGATGAGGAGAATGAGAAT+TGG - chr7_3:81280880-81280899 None:intergenic 35.0%
!! TGAAGTGGAAATTGATGATG+AGG - chr7_3:81280894-81280913 None:intergenic 35.0%
! AGGTTTGTTTGAGTTTGAAG+TGG - chr7_3:81280909-81280928 None:intergenic 35.0%
! GAATTAAAGGTAGTGGTGTT+AGG - chr7_3:81280969-81280988 None:intergenic 35.0%
ATCTGGGAAGAAATTGTGAA+TGG - chr7_3:81281090-81281109 None:intergenic 35.0%
TAATTACGTACCTTGAGACA+TGG - chr7_3:81281130-81281149 None:intergenic 35.0%
TTACTGCACACATCATCATA+AGG - chr7_3:81281202-81281221 None:intergenic 35.0%
!! GAAGAGTGCTCAAAATTGTA+AGG + chr7_3:81281243-81281262 Msa1129260:CDS 35.0%
TTGAAGATCACTAACAAACC+GGG - chr7_3:81281335-81281354 None:intergenic 35.0%
CTTGAAGATCACTAACAAAC+CGG - chr7_3:81281336-81281355 None:intergenic 35.0%
CTTCAAGATCTTTATCAAGG+TGG + chr7_3:81281349-81281368 Msa1129260:CDS 35.0%
!!! TTTTTGTTTTCGTCAGGGTT+TGG - chr7_3:81281400-81281419 None:intergenic 35.0%
!!! GGGTATTTTTGTTTTCGTCA+GGG - chr7_3:81281405-81281424 None:intergenic 35.0%
!!! TGGGTATTTTTGTTTTCGTC+AGG - chr7_3:81281406-81281425 None:intergenic 35.0%
CAAAGAACAAAAAGAGGAAG+AGG + chr7_3:81281506-81281525 Msa1129260:CDS 35.0%
GATTGAAAGGATGAACATGA+TGG + chr7_3:81281684-81281703 Msa1129260:CDS 35.0%
TTGAACAAATATCTAGCCAC+AGG + chr7_3:81281760-81281779 Msa1129260:CDS 35.0%
AGAAGAAGAAGAATATCCTG+TGG - chr7_3:81281779-81281798 None:intergenic 35.0%
CATTATTGTAGGCACAACAA+GGG - chr7_3:81281929-81281948 None:intergenic 35.0%
AGAAATTAGAGGATAGGAGA+AGG + chr7_3:81281950-81281969 Msa1129260:CDS 35.0%
TAACACTTGTAGTAGACTTG+AGG - chr7_3:81282008-81282027 None:intergenic 35.0%
GTTGGATGTTTGGTTAATTG+AGG - chr7_3:81282300-81282319 None:intergenic 35.0%
TCGTATTTATACTACCCCAT+TGG - chr7_3:81282381-81282400 None:intergenic 35.0%
TCGCAAATGTACAAAGAAGT+AGG - chr7_3:81282654-81282673 None:intergenic 35.0%
CTTTGTACATTTGCGATATC+TGG + chr7_3:81282658-81282677 Msa1129260:three_prime_UTR 35.0%
! GGATTTTGTGATGTGAAAAG+AGG + chr7_3:81280485-81280504 Msa1129260:five_prime_UTR 35.0%
GTAGCTGAGTTTGAAAAAAG+AGG + chr7_3:81280704-81280723 Msa1129260:five_prime_UTR 35.0%
GAAGAAGTAGAGGGAATTAA+GGG - chr7_3:81280855-81280874 None:intergenic 35.0%
AGAAGAAGTAGAGGGAATTA+AGG - chr7_3:81280856-81280875 None:intergenic 35.0%
GAATTGGAAGAAGAAGTAGA+GGG - chr7_3:81280864-81280883 None:intergenic 35.0%
AGAATTGGAAGAAGAAGTAG+AGG - chr7_3:81280865-81280884 None:intergenic 35.0%
ATGATGAGGAGAATGAGAAT+TGG - chr7_3:81280880-81280899 None:intergenic 35.0%
!! TGAAGTGGAAATTGATGATG+AGG - chr7_3:81280894-81280913 None:intergenic 35.0%
! AGGTTTGTTTGAGTTTGAAG+TGG - chr7_3:81280909-81280928 None:intergenic 35.0%
! GAATTAAAGGTAGTGGTGTT+AGG - chr7_3:81280969-81280988 None:intergenic 35.0%
ATCTGGGAAGAAATTGTGAA+TGG - chr7_3:81281090-81281109 None:intergenic 35.0%
TAATTACGTACCTTGAGACA+TGG - chr7_3:81281130-81281149 None:intergenic 35.0%
TTACTGCACACATCATCATA+AGG - chr7_3:81281202-81281221 None:intergenic 35.0%
!! GAAGAGTGCTCAAAATTGTA+AGG + chr7_3:81281243-81281262 Msa1129260:CDS 35.0%
TTGAAGATCACTAACAAACC+GGG - chr7_3:81281335-81281354 None:intergenic 35.0%
CTTGAAGATCACTAACAAAC+CGG - chr7_3:81281336-81281355 None:intergenic 35.0%
CTTCAAGATCTTTATCAAGG+TGG + chr7_3:81281349-81281368 Msa1129260:CDS 35.0%
!!! TTTTTGTTTTCGTCAGGGTT+TGG - chr7_3:81281400-81281419 None:intergenic 35.0%
!!! GGGTATTTTTGTTTTCGTCA+GGG - chr7_3:81281405-81281424 None:intergenic 35.0%
!!! TGGGTATTTTTGTTTTCGTC+AGG - chr7_3:81281406-81281425 None:intergenic 35.0%
CAAAGAACAAAAAGAGGAAG+AGG + chr7_3:81281506-81281525 Msa1129260:CDS 35.0%
GATTGAAAGGATGAACATGA+TGG + chr7_3:81281684-81281703 Msa1129260:CDS 35.0%
TTGAACAAATATCTAGCCAC+AGG + chr7_3:81281760-81281779 Msa1129260:CDS 35.0%
AGAAGAAGAAGAATATCCTG+TGG - chr7_3:81281779-81281798 None:intergenic 35.0%
CATTATTGTAGGCACAACAA+GGG - chr7_3:81281929-81281948 None:intergenic 35.0%
AGAAATTAGAGGATAGGAGA+AGG + chr7_3:81281950-81281969 Msa1129260:CDS 35.0%
TAACACTTGTAGTAGACTTG+AGG - chr7_3:81282008-81282027 None:intergenic 35.0%
GTTGGATGTTTGGTTAATTG+AGG - chr7_3:81282300-81282319 None:intergenic 35.0%
TCGTATTTATACTACCCCAT+TGG - chr7_3:81282381-81282400 None:intergenic 35.0%
TCGCAAATGTACAAAGAAGT+AGG - chr7_3:81282654-81282673 None:intergenic 35.0%
CTTTGTACATTTGCGATATC+TGG + chr7_3:81282658-81282677 Msa1129260:three_prime_UTR 35.0%
!! CTAAAAGAGGAGAGTGTTGT+GGG + chr7_3:81280602-81280621 Msa1129260:five_prime_UTR 40.0%
GCTGAGTTTGAAAAAAGAGG+TGG + chr7_3:81280707-81280726 Msa1129260:five_prime_UTR 40.0%
GCAAACATGTTGGATGAAAG+AGG + chr7_3:81280732-81280751 Msa1129260:exon 40.0%
!! AGGAGTACTACTAGTCTTCT+TGG + chr7_3:81280780-81280799 Msa1129260:CDS 40.0%
! AATTAAGGGTATGTGGTGGA+AGG - chr7_3:81280841-81280860 None:intergenic 40.0%
! TAGAGGGAATTAAGGGTATG+TGG - chr7_3:81280848-81280867 None:intergenic 40.0%
!! ATAGTATTGATGGGTGGAAG+AGG - chr7_3:81280929-81280948 None:intergenic 40.0%
!! GCAATGATAGTATTGATGGG+TGG - chr7_3:81280935-81280954 None:intergenic 40.0%
!! GGGGCAATGATAGTATTGAT+GGG - chr7_3:81280938-81280957 None:intergenic 40.0%
! TGGGGCAATGATAGTATTGA+TGG - chr7_3:81280939-81280958 None:intergenic 40.0%
TGAAGATCACTAACAAACCG+GGG - chr7_3:81281334-81281353 None:intergenic 40.0%
CAAGATCTTTATCAAGGTGG+TGG + chr7_3:81281352-81281371 Msa1129260:CDS 40.0%
CGAATCATCTTCTTCGTGTT+GGG - chr7_3:81281425-81281444 None:intergenic 40.0%
TCGAATCATCTTCTTCGTGT+TGG - chr7_3:81281426-81281445 None:intergenic 40.0%
! GAAGAGTTTTTGTGAGACAG+TGG + chr7_3:81281552-81281571 Msa1129260:CDS 40.0%
!! TCAAGAAAAGCTTGCTAGAG+AGG + chr7_3:81281642-81281661 Msa1129260:CDS 40.0%
CCATTATTGTAGGCACAACA+AGG - chr7_3:81281930-81281949 None:intergenic 40.0%
! CCTTGTTGTGCCTACAATAA+TGG + chr7_3:81281927-81281946 Msa1129260:CDS 40.0%
AATTAGAGGATAGGAGAAGG+TGG + chr7_3:81281953-81281972 Msa1129260:CDS 40.0%
! TCTGAAGGGATGTTTGAGTT+GGG + chr7_3:81282090-81282109 Msa1129260:CDS 40.0%
! GATACAAGAGAAGTGCAAAG+AGG + chr7_3:81282112-81282131 Msa1129260:CDS 40.0%
! AGAAAAGGTCAACGGATTCA+AGG + chr7_3:81282202-81282221 Msa1129260:CDS 40.0%
TGAATTGGAGGTTGGATGTT+TGG - chr7_3:81282310-81282329 None:intergenic 40.0%
CATCCAACCTCCAATTCAAA+TGG + chr7_3:81282312-81282331 Msa1129260:CDS 40.0%
TGACCATTTGAATTGGAGGT+TGG - chr7_3:81282318-81282337 None:intergenic 40.0%
TCAGTCTTCTGATTCTCCAA+TGG + chr7_3:81282362-81282381 Msa1129260:CDS 40.0%
CAGTCTTCTGATTCTCCAAT+GGG + chr7_3:81282363-81282382 Msa1129260:CDS 40.0%
AGTCTTCTGATTCTCCAATG+GGG + chr7_3:81282364-81282383 Msa1129260:CDS 40.0%
CATGCAATCAGTGAATTAGC+CGG + chr7_3:81282425-81282444 Msa1129260:three_prime_UTR 40.0%
!! TTGTTTTGCTTGGTGACTGA+TGG + chr7_3:81282589-81282608 Msa1129260:three_prime_UTR 40.0%
!! TGTTTTGCTTGGTGACTGAT+GGG + chr7_3:81282590-81282609 Msa1129260:three_prime_UTR 40.0%
CACGGACAGAATGATAGTTA+AGG - chr7_3:81282749-81282768 None:intergenic 40.0%
!! CTAAAAGAGGAGAGTGTTGT+GGG + chr7_3:81280602-81280621 Msa1129260:five_prime_UTR 40.0%
GCTGAGTTTGAAAAAAGAGG+TGG + chr7_3:81280707-81280726 Msa1129260:five_prime_UTR 40.0%
GCAAACATGTTGGATGAAAG+AGG + chr7_3:81280732-81280751 Msa1129260:exon 40.0%
!! AGGAGTACTACTAGTCTTCT+TGG + chr7_3:81280780-81280799 Msa1129260:CDS 40.0%
! AATTAAGGGTATGTGGTGGA+AGG - chr7_3:81280841-81280860 None:intergenic 40.0%
! TAGAGGGAATTAAGGGTATG+TGG - chr7_3:81280848-81280867 None:intergenic 40.0%
!! ATAGTATTGATGGGTGGAAG+AGG - chr7_3:81280929-81280948 None:intergenic 40.0%
!! GCAATGATAGTATTGATGGG+TGG - chr7_3:81280935-81280954 None:intergenic 40.0%
!! GGGGCAATGATAGTATTGAT+GGG - chr7_3:81280938-81280957 None:intergenic 40.0%
! TGGGGCAATGATAGTATTGA+TGG - chr7_3:81280939-81280958 None:intergenic 40.0%
TGAAGATCACTAACAAACCG+GGG - chr7_3:81281334-81281353 None:intergenic 40.0%
CAAGATCTTTATCAAGGTGG+TGG + chr7_3:81281352-81281371 Msa1129260:CDS 40.0%
CGAATCATCTTCTTCGTGTT+GGG - chr7_3:81281425-81281444 None:intergenic 40.0%
TCGAATCATCTTCTTCGTGT+TGG - chr7_3:81281426-81281445 None:intergenic 40.0%
! GAAGAGTTTTTGTGAGACAG+TGG + chr7_3:81281552-81281571 Msa1129260:CDS 40.0%
!! TCAAGAAAAGCTTGCTAGAG+AGG + chr7_3:81281642-81281661 Msa1129260:CDS 40.0%
CCATTATTGTAGGCACAACA+AGG - chr7_3:81281930-81281949 None:intergenic 40.0%
! CCTTGTTGTGCCTACAATAA+TGG + chr7_3:81281927-81281946 Msa1129260:CDS 40.0%
AATTAGAGGATAGGAGAAGG+TGG + chr7_3:81281953-81281972 Msa1129260:CDS 40.0%
! TCTGAAGGGATGTTTGAGTT+GGG + chr7_3:81282090-81282109 Msa1129260:CDS 40.0%
! GATACAAGAGAAGTGCAAAG+AGG + chr7_3:81282112-81282131 Msa1129260:CDS 40.0%
! AGAAAAGGTCAACGGATTCA+AGG + chr7_3:81282202-81282221 Msa1129260:CDS 40.0%
TGAATTGGAGGTTGGATGTT+TGG - chr7_3:81282310-81282329 None:intergenic 40.0%
CATCCAACCTCCAATTCAAA+TGG + chr7_3:81282312-81282331 Msa1129260:CDS 40.0%
TGACCATTTGAATTGGAGGT+TGG - chr7_3:81282318-81282337 None:intergenic 40.0%
TCAGTCTTCTGATTCTCCAA+TGG + chr7_3:81282362-81282381 Msa1129260:CDS 40.0%
CAGTCTTCTGATTCTCCAAT+GGG + chr7_3:81282363-81282382 Msa1129260:CDS 40.0%
AGTCTTCTGATTCTCCAATG+GGG + chr7_3:81282364-81282383 Msa1129260:CDS 40.0%
CATGCAATCAGTGAATTAGC+CGG + chr7_3:81282425-81282444 Msa1129260:three_prime_UTR 40.0%
!! TTGTTTTGCTTGGTGACTGA+TGG + chr7_3:81282589-81282608 Msa1129260:three_prime_UTR 40.0%
!! TGTTTTGCTTGGTGACTGAT+GGG + chr7_3:81282590-81282609 Msa1129260:three_prime_UTR 40.0%
CACGGACAGAATGATAGTTA+AGG - chr7_3:81282749-81282768 None:intergenic 40.0%
!! GCTAAAAGAGGAGAGTGTTG+TGG + chr7_3:81280601-81280620 Msa1129260:five_prime_UTR 45.0%
GACAAACGAGAGAGAAAGAG+AGG + chr7_3:81280636-81280655 Msa1129260:five_prime_UTR 45.0%
TGCATGTAGAGTAGTAGAGC+TGG + chr7_3:81280672-81280691 Msa1129260:five_prime_UTR 45.0%
AGAGGTGGTAGCAAACATGT+TGG + chr7_3:81280722-81280741 Msa1129260:exon 45.0%
! AGGGAATTAAGGGTATGTGG+TGG - chr7_3:81280845-81280864 None:intergenic 45.0%
CAGCTGGAATCGATGATCAA+CGG - chr7_3:81281026-81281045 None:intergenic 45.0%
TCCCAGATCAACTCATCACA+TGG + chr7_3:81281102-81281121 Msa1129260:CDS 45.0%
!! CCCATGTGATGAGTTGATCT+GGG - chr7_3:81281106-81281125 None:intergenic 45.0%
CCCAGATCAACTCATCACAT+GGG + chr7_3:81281103-81281122 Msa1129260:CDS 45.0%
!! TCCCATGTGATGAGTTGATC+TGG - chr7_3:81281107-81281126 None:intergenic 45.0%
TGCAGTAAGCTAGCTGAGTT+TGG + chr7_3:81281214-81281233 Msa1129260:intron 45.0%
GCAGTAAGCTAGCTGAGTTT+GGG + chr7_3:81281215-81281234 Msa1129260:intron 45.0%
GAAGATCACTAACAAACCGG+GGG - chr7_3:81281333-81281352 None:intergenic 45.0%
GTCGTCATCATCACAGTGTT+TGG - chr7_3:81281467-81281486 None:intergenic 45.0%
! ACACTGTGATGATGACGACA+AGG + chr7_3:81281468-81281487 Msa1129260:CDS 45.0%
! TGATGACGACAAGGTGATGA+TGG + chr7_3:81281477-81281496 Msa1129260:CDS 45.0%
!! ACTCTGTGTCACTTGAGCTA+GGG - chr7_3:81281888-81281907 None:intergenic 45.0%
!! TACTCTGTGTCACTTGAGCT+AGG - chr7_3:81281889-81281908 None:intergenic 45.0%
AGTGCCAACACTTCATCTCT+TGG - chr7_3:81281979-81281998 None:intergenic 45.0%
TCAGAGATTCTCTCCCACAA+AGG - chr7_3:81282075-81282094 None:intergenic 45.0%
TTGTGGGAGAGAATCTCTGA+AGG + chr7_3:81282075-81282094 Msa1129260:CDS 45.0%
TGTGGGAGAGAATCTCTGAA+GGG + chr7_3:81282076-81282095 Msa1129260:CDS 45.0%
! CTCTGAAGGGATGTTTGAGT+TGG + chr7_3:81282089-81282108 Msa1129260:CDS 45.0%
GAATCAGAAGACTGAGCTTG+AGG - chr7_3:81282357-81282376 None:intergenic 45.0%
!! GCTAAAAGAGGAGAGTGTTG+TGG + chr7_3:81280601-81280620 Msa1129260:five_prime_UTR 45.0%
GACAAACGAGAGAGAAAGAG+AGG + chr7_3:81280636-81280655 Msa1129260:five_prime_UTR 45.0%
TGCATGTAGAGTAGTAGAGC+TGG + chr7_3:81280672-81280691 Msa1129260:five_prime_UTR 45.0%
AGAGGTGGTAGCAAACATGT+TGG + chr7_3:81280722-81280741 Msa1129260:exon 45.0%
! AGGGAATTAAGGGTATGTGG+TGG - chr7_3:81280845-81280864 None:intergenic 45.0%
CAGCTGGAATCGATGATCAA+CGG - chr7_3:81281026-81281045 None:intergenic 45.0%
TCCCAGATCAACTCATCACA+TGG + chr7_3:81281102-81281121 Msa1129260:CDS 45.0%
!! CCCATGTGATGAGTTGATCT+GGG - chr7_3:81281106-81281125 None:intergenic 45.0%
CCCAGATCAACTCATCACAT+GGG + chr7_3:81281103-81281122 Msa1129260:CDS 45.0%
!! TCCCATGTGATGAGTTGATC+TGG - chr7_3:81281107-81281126 None:intergenic 45.0%
TGCAGTAAGCTAGCTGAGTT+TGG + chr7_3:81281214-81281233 Msa1129260:intron 45.0%
GCAGTAAGCTAGCTGAGTTT+GGG + chr7_3:81281215-81281234 Msa1129260:intron 45.0%
GAAGATCACTAACAAACCGG+GGG - chr7_3:81281333-81281352 None:intergenic 45.0%
GTCGTCATCATCACAGTGTT+TGG - chr7_3:81281467-81281486 None:intergenic 45.0%
! ACACTGTGATGATGACGACA+AGG + chr7_3:81281468-81281487 Msa1129260:CDS 45.0%
! TGATGACGACAAGGTGATGA+TGG + chr7_3:81281477-81281496 Msa1129260:CDS 45.0%
!! ACTCTGTGTCACTTGAGCTA+GGG - chr7_3:81281888-81281907 None:intergenic 45.0%
!! TACTCTGTGTCACTTGAGCT+AGG - chr7_3:81281889-81281908 None:intergenic 45.0%
AGTGCCAACACTTCATCTCT+TGG - chr7_3:81281979-81281998 None:intergenic 45.0%
TCAGAGATTCTCTCCCACAA+AGG - chr7_3:81282075-81282094 None:intergenic 45.0%
TTGTGGGAGAGAATCTCTGA+AGG + chr7_3:81282075-81282094 Msa1129260:CDS 45.0%
TGTGGGAGAGAATCTCTGAA+GGG + chr7_3:81282076-81282095 Msa1129260:CDS 45.0%
! CTCTGAAGGGATGTTTGAGT+TGG + chr7_3:81282089-81282108 Msa1129260:CDS 45.0%
GAATCAGAAGACTGAGCTTG+AGG - chr7_3:81282357-81282376 None:intergenic 45.0%
! AGTGGTGTTAGGAGAGTGGT+GGG - chr7_3:81280958-81280977 None:intergenic 50.0%
! TAGTGGTGTTAGGAGAGTGG+TGG - chr7_3:81280959-81280978 None:intergenic 50.0%
! AGGTAGTGGTGTTAGGAGAG+TGG - chr7_3:81280962-81280981 None:intergenic 50.0%
!! GATCAACGGTGGTGGAGTTT+GGG - chr7_3:81281012-81281031 None:intergenic 50.0%
!! TGATCAACGGTGGTGGAGTT+TGG - chr7_3:81281013-81281032 None:intergenic 50.0%
GAATCGATGATCAACGGTGG+TGG - chr7_3:81281020-81281039 None:intergenic 50.0%
CTGGAATCGATGATCAACGG+TGG - chr7_3:81281023-81281042 None:intergenic 50.0%
!! CGTTGATCATCGATTCCAGC+TGG + chr7_3:81281024-81281043 Msa1129260:CDS 50.0%
AAGTTCGTCGTTAGTCCAGC+TGG - chr7_3:81281042-81281061 None:intergenic 50.0%
TCACATGGGACCATGTCTCA+AGG + chr7_3:81281117-81281136 Msa1129260:CDS 50.0%
!! AGCTTGCTAGAGAGGAAGCA+TGG + chr7_3:81281650-81281669 Msa1129260:CDS 50.0%
AGGCACAACAAGGGTAGAAG+TGG - chr7_3:81281920-81281939 None:intergenic 50.0%
GTGGCCAAGAGATGAAGTGT+TGG + chr7_3:81281972-81281991 Msa1129260:CDS 50.0%
TCAGAAGACTGAGCTTGAGG+TGG - chr7_3:81282354-81282373 None:intergenic 50.0%
! TTTGCTTGGTGACTGATGGG+AGG + chr7_3:81282593-81282612 Msa1129260:three_prime_UTR 50.0%
! TTGGTGACTGATGGGAGGAT+GGG + chr7_3:81282598-81282617 Msa1129260:three_prime_UTR 50.0%
! AGTGGTGTTAGGAGAGTGGT+GGG - chr7_3:81280958-81280977 None:intergenic 50.0%
! TAGTGGTGTTAGGAGAGTGG+TGG - chr7_3:81280959-81280978 None:intergenic 50.0%
! AGGTAGTGGTGTTAGGAGAG+TGG - chr7_3:81280962-81280981 None:intergenic 50.0%
!! GATCAACGGTGGTGGAGTTT+GGG - chr7_3:81281012-81281031 None:intergenic 50.0%
!! TGATCAACGGTGGTGGAGTT+TGG - chr7_3:81281013-81281032 None:intergenic 50.0%
GAATCGATGATCAACGGTGG+TGG - chr7_3:81281020-81281039 None:intergenic 50.0%
CTGGAATCGATGATCAACGG+TGG - chr7_3:81281023-81281042 None:intergenic 50.0%
!! CGTTGATCATCGATTCCAGC+TGG + chr7_3:81281024-81281043 Msa1129260:CDS 50.0%
AAGTTCGTCGTTAGTCCAGC+TGG - chr7_3:81281042-81281061 None:intergenic 50.0%
TCACATGGGACCATGTCTCA+AGG + chr7_3:81281117-81281136 Msa1129260:CDS 50.0%
!! AGCTTGCTAGAGAGGAAGCA+TGG + chr7_3:81281650-81281669 Msa1129260:CDS 50.0%
AGGCACAACAAGGGTAGAAG+TGG - chr7_3:81281920-81281939 None:intergenic 50.0%
GTGGCCAAGAGATGAAGTGT+TGG + chr7_3:81281972-81281991 Msa1129260:CDS 50.0%
TCAGAAGACTGAGCTTGAGG+TGG - chr7_3:81282354-81282373 None:intergenic 50.0%
! TTTGCTTGGTGACTGATGGG+AGG + chr7_3:81282593-81282612 Msa1129260:three_prime_UTR 50.0%
! TTGGTGACTGATGGGAGGAT+GGG + chr7_3:81282598-81282617 Msa1129260:three_prime_UTR 50.0%
! GTGGTGTTAGGAGAGTGGTG+GGG - chr7_3:81280957-81280976 None:intergenic 55.0%
TAATCAGCAGCAGCAGCAGC+AGG + chr7_3:81282260-81282279 Msa1129260:CDS 55.0%
AATCAGCAGCAGCAGCAGCA+GGG + chr7_3:81282261-81282280 Msa1129260:CDS 55.0%
! CTTGGTGACTGATGGGAGGA+TGG + chr7_3:81282597-81282616 Msa1129260:three_prime_UTR 55.0%
TGGTGACTGATGGGAGGATG+GGG + chr7_3:81282599-81282618 Msa1129260:three_prime_UTR 55.0%
! GTGGTGTTAGGAGAGTGGTG+GGG - chr7_3:81280957-81280976 None:intergenic 55.0%
TAATCAGCAGCAGCAGCAGC+AGG + chr7_3:81282260-81282279 Msa1129260:CDS 55.0%
AATCAGCAGCAGCAGCAGCA+GGG + chr7_3:81282261-81282280 Msa1129260:CDS 55.0%
! CTTGGTGACTGATGGGAGGA+TGG + chr7_3:81282597-81282616 Msa1129260:three_prime_UTR 55.0%
TGGTGACTGATGGGAGGATG+GGG + chr7_3:81282599-81282618 Msa1129260:three_prime_UTR 55.0%
!! ACGGTGGTGGAGTTTGGGTC+TGG - chr7_3:81281007-81281026 None:intergenic 60.0%
!! ACGGTGGTGGAGTTTGGGTC+TGG - chr7_3:81281007-81281026 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 81280478 81282776 81280478 ID=Msa1129260;Name=Msa1129260
chr7_3 mRNA 81280478 81282776 81280478 ID=Msa1129260-mRNA-1;Parent=Msa1129260;Name=Msa1129260-mRNA-1;_AED=0.01;_eAED=0.01;_QI=260|1|1|1|1|1|2|387|523
chr7_3 exon 81280478 81281138 81280478 ID=Msa1129260-mRNA-1:exon:23529;Parent=Msa1129260-mRNA-1
chr7_3 exon 81281219 81282776 81281219 ID=Msa1129260-mRNA-1:exon:23530;Parent=Msa1129260-mRNA-1
chr7_3 five_prime_UTR 81280478 81280737 81280478 ID=Msa1129260-mRNA-1:five_prime_utr;Parent=Msa1129260-mRNA-1
chr7_3 CDS 81280738 81281138 81280738 ID=Msa1129260-mRNA-1:cds;Parent=Msa1129260-mRNA-1
chr7_3 CDS 81281219 81282389 81281219 ID=Msa1129260-mRNA-1:cds;Parent=Msa1129260-mRNA-1
chr7_3 three_prime_UTR 81282390 81282776 81282390 ID=Msa1129260-mRNA-1:three_prime_utr;Parent=Msa1129260-mRNA-1
Gene Sequence

>Msa1129260

ATGTTGGATGAAAGAGGAAAGCATTTTGAATTTGAGCAATTGAGGAGTACTACTAGTCTTCTTGGTTCGTCTTCTTCTTCTGTTGCAAACATCAACAGCACCTTCCACCACATACCCTTAATTCCCTCTACTTCTTCTTCCAATTCTCATTCTCCTCATCATCAATTTCCACTTCAAACTCAAACAAACCTCTTCCACCCATCAATACTATCATTGCCCCACCACTCTCCTAACACCACTACCTTTAATTCTAATTCAATCAACTTCCAGACCCAAACTCCACCACCGTTGATCATCGATTCCAGCTGGACTAACGACGAACTTCTTCTACTCTTCAAGATCACATCTACCATTCACAATTTCTTCCCAGATCAACTCATCACATGGGACCATGTCTCAAGTAAGCTAGCTGAGTTTGGGATCAAGAAGAGTGCTCAAAATTGTAAGGAGAAGTTTGAACATGAGAACACATCATTTATGAAGATTCATAACAATCATAATGATAATAATTTCCCCCGGTTTGTTAGTGATCTTCAAGATCTTTATCAAGGTGGTGGTGTTAGTGTTGATAATAAACAACCAAACCCTGACGAAAACAAAAATACCCAACACGAAGAAGATGATTCGAGAGATGATAGAGTAGAGACCAAACACTGTGATGATGACGACAAGGTGATGATGGAGAAATCAAAGAACAAAAAGAGGAAGAGGCGCCTTGATAGATTTGAAATGTTGAAGAGTTTTTGTGAGACAGTGGTTAACAAAATAATTGCACAACAAGAAGAAATACACAATAAGCTACTTGAAGACATGCTCAAAAGAGATCAAGAAAAGCTTGCTAGAGAGGAAGCATGGAAAAAACAAGAGATTGAAAGGATGAACATGATGGTACAACAACAACAAGCTATTGCAAGTGATAGACAAGCCAACATCATTGAATTCTTGAACAAATATCTAGCCACAGGATATTCTTCTTCTTCTTCACAATTGCACTCACAAAACCCTAATAATCCTTGTAACAATCTTAAATCAAAAACACCTTTTTCTAATGTGATAGCAGATCAAAACCCTAGCTCAAGTGACACAGAGTACTCAAATTCCACTTCTACCCTTGTTGTGCCTACAATAATGGAGAAATTAGAGGATAGGAGAAGGTGGCCAAGAGATGAAGTGTTGGCACTCATAAACCTCAAGTCTACTACAAGTGTTACAAACAGAAGCAACAATAATGTTGAAGGAAATAGTAATAAAGGACCTTTGTGGGAGAGAATCTCTGAAGGGATGTTTGAGTTGGGATACAAGAGAAGTGCAAAGAGGTGTAAAGAAAAATGGGAAAACATAAATAAGTATTTTAAAAAGACAAAGGATATTGTTGTGAATAAGAAGAAAAGGTCAACGGATTCAAGGACTTGTCCTTATTTTCATCAACTCAGTTCTTTGTATAATCAGCAGCAGCAGCAGCAGGGAAAAATAATTGATCCTCAATTAACCAAACATCCAACCTCCAATTCAAATGGTCATATTGTAGATGATCCACCTCAAGCTCAGTCTTCTGATTCTCCAATGGGGTAG
Protein sequence

>Msa1129260

MLDERGKHFEFEQLRSTTSLLGSSSSSVANINSTFHHIPLIPSTSSSNSHSPHHQFPLQTQTNLFHPSILSLPHHSPNTTTFNSNSINFQTQTPPPLIIDSSWTNDELLLLFKITSTIHNFFPDQLITWDHVSSKLAEFGIKKSAQNCKEKFEHENTSFMKIHNNHNDNNFPRFVSDLQDLYQGGGVSVDNKQPNPDENKNTQHEEDDSRDDRVETKHCDDDDKVMMEKSKNKKRKRRLDRFEMLKSFCETVVNKIIAQQEEIHNKLLEDMLKRDQEKLAREEAWKKQEIERMNMMVQQQQAIASDRQANIIEFLNKYLATGYSSSSSQLHSQNPNNPCNNLKSKTPFSNVIADQNPSSSDTEYSNSTSTLVVPTIMEKLEDRRRWPRDEVLALINLKSTTSVTNRSNNNVEGNSNKGPLWERISEGMFELGYKRSAKRCKEKWENINKYFKKTKDIVVNKKKRSTDSRTCPYFHQLSSLYNQQQQQQGKIIDPQLTKHPTSNSNGHIVDDPPQAQSSDSPMG*