Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138990 | XP_003625255.1 | 95.238 | 105 | 5 | 0 | 1 | 105 | 1 | 105 | 5.86e-54 | 174 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138990 | sp|Q01417|PM1_SOYBN | 79.221 | 77 | 15 | 1 | 1 | 77 | 1 | 76 | 3.86e-34 | 118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138990 | G7KVD1 | 95.238 | 105 | 5 | 0 | 1 | 105 | 1 | 105 | 2.80e-54 | 174 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1075230 | Msa1138990 | 0.888875 | 4.003310e-73 | -8.615850e-47 |
| Msa1116140 | Msa1138990 | 0.883999 | 2.787392e-71 | -8.615850e-47 |
| Msa1116150 | Msa1138990 | 0.845804 | 3.231021e-59 | -8.615850e-47 |
| Msa1138990 | Msa1162560 | 0.880107 | 7.206243e-70 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138990 | MtrunA17_Chr7g0258621 | 95.238 | 105 | 5 | 0 | 1 | 105 | 1 | 105 | 5.39e-58 | 174 |
| Msa1138990 | MtrunA17_Chr7g0258631 | 93.069 | 101 | 7 | 0 | 1 | 101 | 1 | 101 | 6.25e-52 | 158 |
| Msa1138990 | MtrunA17_Chr7g0258641 | 83.784 | 74 | 12 | 0 | 4 | 77 | 3 | 76 | 3.41e-36 | 121 |
| Msa1138990 | MtrunA17_Chr1g0175211 | 68.750 | 80 | 22 | 1 | 5 | 81 | 4 | 83 | 4.62e-31 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1138990 | AT5G06760.1 | 65.672 | 67 | 23 | 0 | 10 | 76 | 2 | 68 | 4.86e-25 | 92.4 |
Find 42 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACCCTTTCTTCTTTCTTT+TGG | 0.103265 | 7_4:-8962036 | None:intergenic |
| GCCACCACCGGGCACCAATT+AGG | 0.221115 | 7_4:+8962106 | Msa1138990:CDS |
| GTTGGCAGCTGTCTCCTTAA+TGG | 0.241135 | 7_4:-8961390 | None:intergenic |
| CTTCTCTTGAACTGTGGCCT+TGG | 0.285748 | 7_4:-8961447 | None:intergenic |
| GGACACCACACCACGGGAAC+TGG | 0.359178 | 7_4:+8962136 | Msa1138990:CDS |
| GAAAACAGGAGAGTCCATTA+AGG | 0.363155 | 7_4:+8961376 | Msa1138990:CDS |
| CCACCACCGGGCACCAATTA+GGG | 0.378531 | 7_4:+8962107 | Msa1138990:CDS |
| GGTGTCCACCCTGCCCTAAT+TGG | 0.383691 | 7_4:-8962120 | None:intergenic |
| GCTCAAACGAGGAGTCAGTT+TGG | 0.390088 | 7_4:+8962166 | Msa1138990:CDS |
| CTCAAACGAGGAGTCAGTTT+GGG | 0.391807 | 7_4:+8962167 | Msa1138990:CDS |
| CAAGGAGGAGCGAAGAAAAC+AGG | 0.398656 | 7_4:+8961362 | Msa1138990:CDS |
| ATTGGTGCTTCAGCCAAATC+TGG | 0.410427 | 7_4:+8961413 | Msa1138990:CDS |
| CCCTAATTGGTGCCCGGTGG+TGG | 0.412966 | 7_4:-8962107 | None:intergenic |
| CACCACACCACGGGAACTGG+TGG | 0.486869 | 7_4:+8962139 | Msa1138990:CDS |
| CAGGGTGGACACCACACCAC+GGG | 0.488696 | 7_4:+8962130 | Msa1138990:CDS |
| ACCCTGCCCTAATTGGTGCC+CGG | 0.493985 | 7_4:-8962113 | None:intergenic |
| CACCGGGCACCAATTAGGGC+AGG | 0.503630 | 7_4:+8962111 | Msa1138990:CDS |
| CCTCTTTATCAAGCTCAGCC+TGG | 0.513235 | 7_4:-8962060 | None:intergenic |
| ATCACATGATCCCTTGCAAA+AGG | 0.516543 | 7_4:+8962003 | Msa1138990:CDS |
| CCAGGCTGAGCTTGATAAAG+AGG | 0.523145 | 7_4:+8962060 | Msa1138990:CDS |
| CCCCACCAGTTCCCGTGGTG+TGG | 0.523168 | 7_4:-8962141 | None:intergenic |
| TTTGGCTGAAGCACCAATGT+TGG | 0.533030 | 7_4:-8961408 | None:intergenic |
| AACCCAAAAGAAAGAAGAAA+GGG | 0.533989 | 7_4:+8962033 | Msa1138990:CDS |
| CACAACGCTGCAGCCACCAC+CGG | 0.534674 | 7_4:+8962094 | Msa1138990:CDS |
| AGCAGCCCCACCAGTTCCCG+TGG | 0.542543 | 7_4:-8962146 | None:intergenic |
| CCACACCACGGGAACTGGTG+GGG | 0.542809 | 7_4:+8962141 | Msa1138990:CDS |
| CAACCCAAAAGAAAGAAGAA+AGG | 0.548482 | 7_4:+8962032 | Msa1138990:CDS |
| GAAAGAAGAAAGGGTTAACC+AGG | 0.561684 | 7_4:+8962042 | Msa1138990:CDS |
| ACCACACCACGGGAACTGGT+GGG | 0.566675 | 7_4:+8962140 | Msa1138990:CDS |
| TGATCCCTTGCAAAAGGAGA+TGG | 0.570165 | 7_4:+8962009 | Msa1138990:CDS |
| AAGGAGACAGCTGCCAACAT+TGG | 0.570685 | 7_4:+8961395 | Msa1138990:CDS |
| ACAACGCTGCAGCCACCACC+GGG | 0.572456 | 7_4:+8962095 | Msa1138990:CDS |
| CAAGGCCACAGTTCAAGAGA+AGG | 0.574863 | 7_4:+8961448 | Msa1138990:CDS |
| TGCTTCAGCCAAATCTGGCA+TGG | 0.578401 | 7_4:+8961418 | Msa1138990:CDS |
| AATTACCTTCTCTTGAACTG+TGG | 0.600856 | 7_4:-8961453 | None:intergenic |
| GGCTGAGCTTGATAAAGAGG+CGG | 0.606143 | 7_4:+8962063 | Msa1138990:CDS |
| CTGGTGGGGCTGCTCAAACG+AGG | 0.620605 | 7_4:+8962155 | Msa1138990:CDS |
| GCAGGGTGGACACCACACCA+CGG | 0.640154 | 7_4:+8962129 | Msa1138990:CDS |
| ATCTGGCATGGAAAAGACCA+AGG | 0.660335 | 7_4:+8961430 | Msa1138990:CDS |
| ACCGGGCACCAATTAGGGCA+GGG | 0.673120 | 7_4:+8962112 | Msa1138990:CDS |
| CTGCCCTAATTGGTGCCCGG+TGG | 0.676521 | 7_4:-8962110 | None:intergenic |
| GGGCACCAATTAGGGCAGGG+TGG | 0.695693 | 7_4:+8962115 | Msa1138990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTAACATATTTTTTTTTGT+TGG | + | chr7_4:8961671-8961690 | Msa1138990:intron | 15.0% |
| !!! | GTTAACATATTTTTTTTTGT+TGG | + | chr7_4:8961671-8961690 | Msa1138990:intron | 15.0% |
| !! | AAGGTAATTGCTTTCATTTT+TGG | + | chr7_4:8961467-8961486 | Msa1138990:intron | 25.0% |
| !! | GTTTTGTCACTAAAATTATG+AGG | - | chr7_4:8961594-8961613 | None:intergenic | 25.0% |
| ! | GATGACAAAGTGAATTAAAA+GGG | - | chr7_4:8961780-8961799 | None:intergenic | 25.0% |
| ! | AGATGACAAAGTGAATTAAA+AGG | - | chr7_4:8961781-8961800 | None:intergenic | 25.0% |
| ! | TATATGCACATGTTTCAAAT+TGG | + | chr7_4:8961884-8961903 | Msa1138990:intron | 25.0% |
| !! | AAGGTAATTGCTTTCATTTT+TGG | + | chr7_4:8961467-8961486 | Msa1138990:intron | 25.0% |
| !! | GTTTTGTCACTAAAATTATG+AGG | - | chr7_4:8961594-8961613 | None:intergenic | 25.0% |
| ! | GATGACAAAGTGAATTAAAA+GGG | - | chr7_4:8961780-8961799 | None:intergenic | 25.0% |
| ! | AGATGACAAAGTGAATTAAA+AGG | - | chr7_4:8961781-8961800 | None:intergenic | 25.0% |
| ! | TATATGCACATGTTTCAAAT+TGG | + | chr7_4:8961884-8961903 | Msa1138990:intron | 25.0% |
| AACCCAAAAGAAAGAAGAAA+GGG | + | chr7_4:8962033-8962052 | Msa1138990:CDS | 30.0% | |
| ! | AACCCTTTCTTCTTTCTTTT+GGG | - | chr7_4:8962038-8962057 | None:intergenic | 30.0% |
| ! | TAACCCTTTCTTCTTTCTTT+TGG | - | chr7_4:8962039-8962058 | None:intergenic | 30.0% |
| AACCCAAAAGAAAGAAGAAA+GGG | + | chr7_4:8962033-8962052 | Msa1138990:CDS | 30.0% | |
| ! | AACCCTTTCTTCTTTCTTTT+GGG | - | chr7_4:8962038-8962057 | None:intergenic | 30.0% |
| ! | TAACCCTTTCTTCTTTCTTT+TGG | - | chr7_4:8962039-8962058 | None:intergenic | 30.0% |
| AATTACCTTCTCTTGAACTG+TGG | - | chr7_4:8961456-8961475 | None:intergenic | 35.0% | |
| CACGAGGCTAATTATTATTG+AGG | + | chr7_4:8961622-8961641 | Msa1138990:intron | 35.0% | |
| CAACCCAAAAGAAAGAAGAA+AGG | + | chr7_4:8962032-8962051 | Msa1138990:CDS | 35.0% | |
| AATTACCTTCTCTTGAACTG+TGG | - | chr7_4:8961456-8961475 | None:intergenic | 35.0% | |
| CACGAGGCTAATTATTATTG+AGG | + | chr7_4:8961622-8961641 | Msa1138990:intron | 35.0% | |
| CAACCCAAAAGAAAGAAGAA+AGG | + | chr7_4:8962032-8962051 | Msa1138990:CDS | 35.0% | |
| GAAAACAGGAGAGTCCATTA+AGG | + | chr7_4:8961376-8961395 | Msa1138990:CDS | 40.0% | |
| GACAAAACTCTTTACTCACG+AGG | + | chr7_4:8961606-8961625 | Msa1138990:intron | 40.0% | |
| TATGTTAACTAGCCACACGA+GGG | - | chr7_4:8961660-8961679 | None:intergenic | 40.0% | |
| ATATGTTAACTAGCCACACG+AGG | - | chr7_4:8961661-8961680 | None:intergenic | 40.0% | |
| ATCACATGATCCCTTGCAAA+AGG | + | chr7_4:8962003-8962022 | Msa1138990:CDS | 40.0% | |
| GAAAGAAGAAAGGGTTAACC+AGG | + | chr7_4:8962042-8962061 | Msa1138990:CDS | 40.0% | |
| GAAAACAGGAGAGTCCATTA+AGG | + | chr7_4:8961376-8961395 | Msa1138990:CDS | 40.0% | |
| GACAAAACTCTTTACTCACG+AGG | + | chr7_4:8961606-8961625 | Msa1138990:intron | 40.0% | |
| TATGTTAACTAGCCACACGA+GGG | - | chr7_4:8961660-8961679 | None:intergenic | 40.0% | |
| ATATGTTAACTAGCCACACG+AGG | - | chr7_4:8961661-8961680 | None:intergenic | 40.0% | |
| ATCACATGATCCCTTGCAAA+AGG | + | chr7_4:8962003-8962022 | Msa1138990:CDS | 40.0% | |
| GAAAGAAGAAAGGGTTAACC+AGG | + | chr7_4:8962042-8962061 | Msa1138990:CDS | 40.0% | |
| ! | TTTGGCTGAAGCACCAATGT+TGG | - | chr7_4:8961411-8961430 | None:intergenic | 45.0% |
| ! | ATTGGTGCTTCAGCCAAATC+TGG | + | chr7_4:8961413-8961432 | Msa1138990:CDS | 45.0% |
| ! | GGTCTTTTCCATGCCAGATT+TGG | - | chr7_4:8961429-8961448 | None:intergenic | 45.0% |
| ATCTGGCATGGAAAAGACCA+AGG | + | chr7_4:8961430-8961449 | Msa1138990:CDS | 45.0% | |
| TGATCCCTTGCAAAAGGAGA+TGG | + | chr7_4:8962009-8962028 | Msa1138990:CDS | 45.0% | |
| ! | GTTGCCATCTCCTTTTGCAA+GGG | - | chr7_4:8962016-8962035 | None:intergenic | 45.0% |
| CTCAAACGAGGAGTCAGTTT+GGG | + | chr7_4:8962167-8962186 | Msa1138990:CDS | 45.0% | |
| ! | TTTGGCTGAAGCACCAATGT+TGG | - | chr7_4:8961411-8961430 | None:intergenic | 45.0% |
| ! | ATTGGTGCTTCAGCCAAATC+TGG | + | chr7_4:8961413-8961432 | Msa1138990:CDS | 45.0% |
| ! | GGTCTTTTCCATGCCAGATT+TGG | - | chr7_4:8961429-8961448 | None:intergenic | 45.0% |
| ATCTGGCATGGAAAAGACCA+AGG | + | chr7_4:8961430-8961449 | Msa1138990:CDS | 45.0% | |
| TGATCCCTTGCAAAAGGAGA+TGG | + | chr7_4:8962009-8962028 | Msa1138990:CDS | 45.0% | |
| ! | GTTGCCATCTCCTTTTGCAA+GGG | - | chr7_4:8962016-8962035 | None:intergenic | 45.0% |
| CTCAAACGAGGAGTCAGTTT+GGG | + | chr7_4:8962167-8962186 | Msa1138990:CDS | 45.0% | |
| CAAGGAGGAGCGAAGAAAAC+AGG | + | chr7_4:8961362-8961381 | Msa1138990:CDS | 50.0% | |
| GTTGGCAGCTGTCTCCTTAA+TGG | - | chr7_4:8961393-8961412 | None:intergenic | 50.0% | |
| AAGGAGACAGCTGCCAACAT+TGG | + | chr7_4:8961395-8961414 | Msa1138990:CDS | 50.0% | |
| TGCTTCAGCCAAATCTGGCA+TGG | + | chr7_4:8961418-8961437 | Msa1138990:CDS | 50.0% | |
| CTTCTCTTGAACTGTGGCCT+TGG | - | chr7_4:8961450-8961469 | None:intergenic | 50.0% | |
| CAAGGCCACAGTTCAAGAGA+AGG | + | chr7_4:8961448-8961467 | Msa1138990:CDS | 50.0% | |
| TCAACAACTCTTCCCTCGTG+TGG | + | chr7_4:8961645-8961664 | Msa1138990:intron | 50.0% | |
| ! | GGTTGCCATCTCCTTTTGCA+AGG | - | chr7_4:8962017-8962036 | None:intergenic | 50.0% |
| CCTCTTTATCAAGCTCAGCC+TGG | - | chr7_4:8962063-8962082 | None:intergenic | 50.0% | |
| CCAGGCTGAGCTTGATAAAG+AGG | + | chr7_4:8962060-8962079 | Msa1138990:CDS | 50.0% | |
| GGCTGAGCTTGATAAAGAGG+CGG | + | chr7_4:8962063-8962082 | Msa1138990:CDS | 50.0% | |
| GCTCAAACGAGGAGTCAGTT+TGG | + | chr7_4:8962166-8962185 | Msa1138990:CDS | 50.0% | |
| CAAGGAGGAGCGAAGAAAAC+AGG | + | chr7_4:8961362-8961381 | Msa1138990:CDS | 50.0% | |
| GTTGGCAGCTGTCTCCTTAA+TGG | - | chr7_4:8961393-8961412 | None:intergenic | 50.0% | |
| AAGGAGACAGCTGCCAACAT+TGG | + | chr7_4:8961395-8961414 | Msa1138990:CDS | 50.0% | |
| TGCTTCAGCCAAATCTGGCA+TGG | + | chr7_4:8961418-8961437 | Msa1138990:CDS | 50.0% | |
| CTTCTCTTGAACTGTGGCCT+TGG | - | chr7_4:8961450-8961469 | None:intergenic | 50.0% | |
| CAAGGCCACAGTTCAAGAGA+AGG | + | chr7_4:8961448-8961467 | Msa1138990:CDS | 50.0% | |
| TCAACAACTCTTCCCTCGTG+TGG | + | chr7_4:8961645-8961664 | Msa1138990:intron | 50.0% | |
| ! | GGTTGCCATCTCCTTTTGCA+AGG | - | chr7_4:8962017-8962036 | None:intergenic | 50.0% |
| CCTCTTTATCAAGCTCAGCC+TGG | - | chr7_4:8962063-8962082 | None:intergenic | 50.0% | |
| CCAGGCTGAGCTTGATAAAG+AGG | + | chr7_4:8962060-8962079 | Msa1138990:CDS | 50.0% | |
| GGCTGAGCTTGATAAAGAGG+CGG | + | chr7_4:8962063-8962082 | Msa1138990:CDS | 50.0% | |
| GCTCAAACGAGGAGTCAGTT+TGG | + | chr7_4:8962166-8962185 | Msa1138990:CDS | 50.0% | |
| CCACCACCGGGCACCAATTA+GGG | + | chr7_4:8962107-8962126 | Msa1138990:CDS | 60.0% | |
| ACCGGGCACCAATTAGGGCA+GGG | + | chr7_4:8962112-8962131 | Msa1138990:CDS | 60.0% | |
| ! | ACCCTGCCCTAATTGGTGCC+CGG | - | chr7_4:8962116-8962135 | None:intergenic | 60.0% |
| GGTGTCCACCCTGCCCTAAT+TGG | - | chr7_4:8962123-8962142 | None:intergenic | 60.0% | |
| ACCACACCACGGGAACTGGT+GGG | + | chr7_4:8962140-8962159 | Msa1138990:CDS | 60.0% | |
| CCACCACCGGGCACCAATTA+GGG | + | chr7_4:8962107-8962126 | Msa1138990:CDS | 60.0% | |
| ACCGGGCACCAATTAGGGCA+GGG | + | chr7_4:8962112-8962131 | Msa1138990:CDS | 60.0% | |
| ! | ACCCTGCCCTAATTGGTGCC+CGG | - | chr7_4:8962116-8962135 | None:intergenic | 60.0% |
| GGTGTCCACCCTGCCCTAAT+TGG | - | chr7_4:8962123-8962142 | None:intergenic | 60.0% | |
| ACCACACCACGGGAACTGGT+GGG | + | chr7_4:8962140-8962159 | Msa1138990:CDS | 60.0% | |
| CACAACGCTGCAGCCACCAC+CGG | + | chr7_4:8962094-8962113 | Msa1138990:CDS | 65.0% | |
| ACAACGCTGCAGCCACCACC+GGG | + | chr7_4:8962095-8962114 | Msa1138990:CDS | 65.0% | |
| GCCACCACCGGGCACCAATT+AGG | + | chr7_4:8962106-8962125 | Msa1138990:CDS | 65.0% | |
| ! | CCCTAATTGGTGCCCGGTGG+TGG | - | chr7_4:8962110-8962129 | None:intergenic | 65.0% |
| ! | CTGCCCTAATTGGTGCCCGG+TGG | - | chr7_4:8962113-8962132 | None:intergenic | 65.0% |
| CACCGGGCACCAATTAGGGC+AGG | + | chr7_4:8962111-8962130 | Msa1138990:CDS | 65.0% | |
| GGGCACCAATTAGGGCAGGG+TGG | + | chr7_4:8962115-8962134 | Msa1138990:CDS | 65.0% | |
| GCAGGGTGGACACCACACCA+CGG | + | chr7_4:8962129-8962148 | Msa1138990:CDS | 65.0% | |
| CAGGGTGGACACCACACCAC+GGG | + | chr7_4:8962130-8962149 | Msa1138990:CDS | 65.0% | |
| GGACACCACACCACGGGAAC+TGG | + | chr7_4:8962136-8962155 | Msa1138990:CDS | 65.0% | |
| CACCACACCACGGGAACTGG+TGG | + | chr7_4:8962139-8962158 | Msa1138990:CDS | 65.0% | |
| CCACACCACGGGAACTGGTG+GGG | + | chr7_4:8962141-8962160 | Msa1138990:CDS | 65.0% | |
| CTGGTGGGGCTGCTCAAACG+AGG | + | chr7_4:8962155-8962174 | Msa1138990:CDS | 65.0% | |
| CACAACGCTGCAGCCACCAC+CGG | + | chr7_4:8962094-8962113 | Msa1138990:CDS | 65.0% | |
| ACAACGCTGCAGCCACCACC+GGG | + | chr7_4:8962095-8962114 | Msa1138990:CDS | 65.0% | |
| GCCACCACCGGGCACCAATT+AGG | + | chr7_4:8962106-8962125 | Msa1138990:CDS | 65.0% | |
| ! | CCCTAATTGGTGCCCGGTGG+TGG | - | chr7_4:8962110-8962129 | None:intergenic | 65.0% |
| ! | CTGCCCTAATTGGTGCCCGG+TGG | - | chr7_4:8962113-8962132 | None:intergenic | 65.0% |
| CACCGGGCACCAATTAGGGC+AGG | + | chr7_4:8962111-8962130 | Msa1138990:CDS | 65.0% | |
| GGGCACCAATTAGGGCAGGG+TGG | + | chr7_4:8962115-8962134 | Msa1138990:CDS | 65.0% | |
| GCAGGGTGGACACCACACCA+CGG | + | chr7_4:8962129-8962148 | Msa1138990:CDS | 65.0% | |
| CAGGGTGGACACCACACCAC+GGG | + | chr7_4:8962130-8962149 | Msa1138990:CDS | 65.0% | |
| GGACACCACACCACGGGAAC+TGG | + | chr7_4:8962136-8962155 | Msa1138990:CDS | 65.0% | |
| CACCACACCACGGGAACTGG+TGG | + | chr7_4:8962139-8962158 | Msa1138990:CDS | 65.0% | |
| CCACACCACGGGAACTGGTG+GGG | + | chr7_4:8962141-8962160 | Msa1138990:CDS | 65.0% | |
| CTGGTGGGGCTGCTCAAACG+AGG | + | chr7_4:8962155-8962174 | Msa1138990:CDS | 65.0% | |
| CCCCACCAGTTCCCGTGGTG+TGG | - | chr7_4:8962144-8962163 | None:intergenic | 70.0% | |
| AGCAGCCCCACCAGTTCCCG+TGG | - | chr7_4:8962149-8962168 | None:intergenic | 70.0% | |
| CCCCACCAGTTCCCGTGGTG+TGG | - | chr7_4:8962144-8962163 | None:intergenic | 70.0% | |
| AGCAGCCCCACCAGTTCCCG+TGG | - | chr7_4:8962149-8962168 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 8961359 | 8962195 | 8961359 | ID=Msa1138990;Name=Msa1138990 |
| chr7_4 | mRNA | 8961359 | 8962195 | 8961359 | ID=Msa1138990-mRNA-1;Parent=Msa1138990;Name=Msa1138990-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|2|0|105 |
| chr7_4 | exon | 8961359 | 8961469 | 8961359 | ID=Msa1138990-mRNA-1:exon:2353;Parent=Msa1138990-mRNA-1 |
| chr7_4 | exon | 8961989 | 8962195 | 8961989 | ID=Msa1138990-mRNA-1:exon:2354;Parent=Msa1138990-mRNA-1 |
| chr7_4 | CDS | 8961359 | 8961469 | 8961359 | ID=Msa1138990-mRNA-1:cds;Parent=Msa1138990-mRNA-1 |
| chr7_4 | CDS | 8961989 | 8962195 | 8961989 | ID=Msa1138990-mRNA-1:cds;Parent=Msa1138990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
