Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1140670 | XP_003621757.1 | 99.335 | 451 | 3 | 0 | 1 | 451 | 1 | 451 | 0.0 | 922 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1140670 | sp|Q8LJW3|ACR4_ARATH | 57.395 | 453 | 180 | 6 | 7 | 451 | 4 | 451 | 0.0 | 519 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1140670 | G7KUS8 | 99.335 | 451 | 3 | 0 | 1 | 451 | 1 | 451 | 0.0 | 922 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1010800 | Msa1140670 | 0.947299 | 8.805636e-106 | -8.615850e-47 |
| Msa1052390 | Msa1140670 | 0.886838 | 2.413749e-72 | -8.615850e-47 |
| Msa0516370 | Msa1140670 | 0.804411 | 2.188435e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1140670 | MtrunA17_Chr7g0222461 | 99.335 | 451 | 3 | 0 | 1 | 451 | 1 | 451 | 0.0 | 922 |
| Msa1140670 | MtrunA17_Chr5g0420221 | 58.758 | 451 | 173 | 6 | 4 | 451 | 11 | 451 | 1.99e-180 | 511 |
| Msa1140670 | MtrunA17_Chr7g0224571 | 56.250 | 448 | 184 | 5 | 10 | 451 | 1 | 442 | 1.46e-175 | 499 |
| Msa1140670 | MtrunA17_Chr3g0125661 | 55.012 | 409 | 172 | 5 | 10 | 409 | 9 | 414 | 3.00e-157 | 452 |
| Msa1140670 | MtrunA17_Chr5g0398581 | 51.794 | 446 | 197 | 5 | 12 | 451 | 8 | 441 | 1.40e-153 | 443 |
| Msa1140670 | MtrunA17_Chr1g0159541 | 51.786 | 448 | 197 | 8 | 10 | 441 | 9 | 453 | 1.55e-153 | 443 |
| Msa1140670 | MtrunA17_Chr4g0056741 | 50.998 | 451 | 193 | 5 | 12 | 451 | 8 | 441 | 6.65e-153 | 441 |
| Msa1140670 | MtrunA17_Chr5g0400941 | 43.662 | 426 | 217 | 6 | 10 | 413 | 9 | 433 | 9.58e-121 | 360 |
| Msa1140670 | MtrunA17_Chr4g0054261 | 37.500 | 472 | 263 | 6 | 10 | 449 | 28 | 499 | 1.34e-97 | 301 |
| Msa1140670 | MtrunA17_Chr7g0264801 | 22.905 | 358 | 240 | 11 | 36 | 371 | 20 | 363 | 4.83e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1140670 | AT1G69040.1 | 57.395 | 453 | 180 | 6 | 7 | 451 | 4 | 451 | 0.0 | 519 |
| Msa1140670 | AT1G69040.2 | 57.395 | 453 | 180 | 6 | 7 | 451 | 8 | 455 | 0.0 | 519 |
| Msa1140670 | AT3G01990.7 | 58.040 | 398 | 161 | 4 | 11 | 407 | 17 | 409 | 7.75e-164 | 469 |
| Msa1140670 | AT3G01990.5 | 58.040 | 398 | 161 | 4 | 11 | 407 | 17 | 409 | 7.75e-164 | 469 |
| Msa1140670 | AT3G01990.10 | 58.040 | 398 | 161 | 4 | 11 | 407 | 3 | 395 | 9.73e-164 | 469 |
| Msa1140670 | AT3G01990.1 | 58.040 | 398 | 161 | 4 | 11 | 407 | 3 | 395 | 9.73e-164 | 469 |
| Msa1140670 | AT3G01990.6 | 58.040 | 398 | 161 | 4 | 11 | 407 | 17 | 409 | 1.24e-163 | 469 |
| Msa1140670 | AT3G01990.11 | 58.040 | 398 | 161 | 4 | 11 | 407 | 3 | 395 | 1.81e-163 | 468 |
| Msa1140670 | AT2G03730.2 | 53.846 | 455 | 192 | 7 | 7 | 449 | 8 | 456 | 5.94e-161 | 462 |
| Msa1140670 | AT2G03730.1 | 53.846 | 455 | 192 | 7 | 7 | 449 | 8 | 456 | 5.94e-161 | 462 |
| Msa1140670 | AT1G76990.4 | 55.501 | 409 | 169 | 4 | 10 | 409 | 9 | 413 | 2.55e-160 | 461 |
| Msa1140670 | AT1G76990.5 | 55.501 | 409 | 169 | 4 | 10 | 409 | 9 | 413 | 2.55e-160 | 461 |
| Msa1140670 | AT1G76990.2 | 55.501 | 409 | 169 | 4 | 10 | 409 | 9 | 413 | 2.55e-160 | 461 |
| Msa1140670 | AT1G76990.3 | 55.501 | 409 | 169 | 4 | 10 | 409 | 9 | 413 | 2.55e-160 | 461 |
| Msa1140670 | AT1G76990.1 | 55.501 | 409 | 169 | 4 | 10 | 409 | 9 | 413 | 2.55e-160 | 461 |
| Msa1140670 | AT1G12420.1 | 50.667 | 450 | 196 | 8 | 12 | 451 | 8 | 441 | 2.53e-142 | 414 |
| Msa1140670 | AT5G25320.1 | 43.763 | 489 | 220 | 11 | 10 | 444 | 9 | 496 | 3.34e-138 | 406 |
| Msa1140670 | AT4G22780.1 | 47.174 | 460 | 201 | 11 | 12 | 449 | 8 | 447 | 1.56e-134 | 395 |
| Msa1140670 | AT4G22780.1 | 30.409 | 171 | 104 | 2 | 10 | 178 | 218 | 375 | 2.71e-11 | 65.9 |
| Msa1140670 | AT4G22780.2 | 47.174 | 460 | 201 | 11 | 12 | 449 | 8 | 447 | 1.56e-134 | 395 |
| Msa1140670 | AT4G22780.2 | 30.409 | 171 | 104 | 2 | 10 | 178 | 218 | 375 | 2.71e-11 | 65.9 |
| Msa1140670 | AT5G25320.3 | 44.105 | 458 | 203 | 9 | 39 | 444 | 1 | 457 | 7.38e-134 | 394 |
| Msa1140670 | AT3G01990.4 | 57.057 | 333 | 137 | 4 | 11 | 342 | 17 | 344 | 1.69e-128 | 376 |
| Msa1140670 | AT3G01990.9 | 57.057 | 333 | 137 | 4 | 11 | 342 | 3 | 330 | 1.85e-128 | 375 |
| Msa1140670 | AT3G01990.2 | 57.622 | 328 | 133 | 4 | 11 | 337 | 17 | 339 | 3.22e-128 | 375 |
| Msa1140670 | AT5G65890.1 | 45.863 | 423 | 204 | 9 | 10 | 409 | 10 | 430 | 3.31e-121 | 362 |
| Msa1140670 | AT5G65890.3 | 45.863 | 423 | 204 | 9 | 10 | 409 | 10 | 430 | 3.31e-121 | 362 |
| Msa1140670 | AT1G12420.2 | 49.091 | 385 | 170 | 8 | 77 | 451 | 1 | 369 | 1.52e-110 | 331 |
| Msa1140670 | AT3G01990.3 | 54.762 | 294 | 125 | 3 | 11 | 302 | 17 | 304 | 3.50e-106 | 318 |
| Msa1140670 | AT3G01990.8 | 54.762 | 294 | 125 | 3 | 11 | 302 | 3 | 290 | 6.23e-106 | 317 |
| Msa1140670 | AT5G25320.2 | 43.169 | 366 | 169 | 8 | 10 | 337 | 9 | 373 | 4.40e-102 | 309 |
| Msa1140670 | AT5G65890.4 | 43.684 | 380 | 189 | 9 | 53 | 409 | 1 | 378 | 5.45e-102 | 311 |
| Msa1140670 | AT5G65890.2 | 43.684 | 380 | 189 | 9 | 53 | 409 | 1 | 378 | 5.45e-102 | 311 |
| Msa1140670 | AT5G65890.5 | 43.791 | 306 | 154 | 6 | 120 | 409 | 13 | 316 | 2.91e-83 | 261 |
| Msa1140670 | AT2G39570.1 | 23.229 | 353 | 246 | 11 | 37 | 371 | 21 | 366 | 2.53e-11 | 65.9 |
Find 103 sgRNAs with CRISPR-Local
Find 199 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTGTACCTTTGAAAAT+TGG | 0.118377 | 7_4:-12556567 | None:intergenic |
| TTCTGTTCTGTTTCAAACTA+TGG | 0.197312 | 7_4:+12556678 | Msa1140670:exon |
| ATCTGATGGTGGATGGTTTA+TGG | 0.205537 | 7_4:+12557104 | Msa1140670:CDS |
| TTTCATGTTACTGATCAAAA+TGG | 0.211096 | 7_4:+12557274 | Msa1140670:CDS |
| TTCACTCTTAACTGGATTTC+CGG | 0.229487 | 7_4:-12559600 | None:intergenic |
| AGAAGCTTATTTCAAACTTT+TGG | 0.244045 | 7_4:-12560037 | None:intergenic |
| TCAATTGTTTCACTCTTAAC+TGG | 0.271268 | 7_4:-12559608 | None:intergenic |
| GGTGTAAAGCTCGAACTTTC+CGG | 0.271281 | 7_4:+12559449 | Msa1140670:CDS |
| CAGAACAACAACTTTGATAA+AGG | 0.291767 | 7_4:+12556894 | Msa1140670:CDS |
| TTTATCTAGGCATGTTTCAT+TGG | 0.353143 | 7_4:+12559947 | Msa1140670:three_prime_UTR |
| CCGCTACCACATTGCATTTG+AGG | 0.353645 | 7_4:-12558057 | None:intergenic |
| TCTTTGTACCTTTGAAAATT+GGG | 0.357409 | 7_4:-12556566 | None:intergenic |
| GTTGATGATTGCATCGATAA+AGG | 0.360000 | 7_4:+12558367 | Msa1140670:CDS |
| GAGAGGTTTCTTTACAATCT+AGG | 0.372115 | 7_4:+12559749 | Msa1140670:CDS |
| AATAGTAACTTCGGTCGATC+TGG | 0.375903 | 7_4:-12558415 | None:intergenic |
| CATACAACGATCGAGTTAAC+AGG | 0.410366 | 7_4:+12557986 | Msa1140670:CDS |
| TGAAGGAACAGAAGCATATC+AGG | 0.414309 | 7_4:+12558498 | Msa1140670:CDS |
| AAGACTTCTGAAAGCAATCC+TGG | 0.415942 | 7_4:-12558019 | None:intergenic |
| CTTTCTGCTTCAGAACTGAT+TGG | 0.421013 | 7_4:-12559064 | None:intergenic |
| TCGAGTTAACAGGACGAGAT+AGG | 0.422142 | 7_4:+12557996 | Msa1140670:CDS |
| ATGTGGTAGCGGCTGAAGTC+TGG | 0.426365 | 7_4:+12558068 | Msa1140670:CDS |
| TCTCTTTACGTGATCTCGTT+AGG | 0.427447 | 7_4:+12559717 | Msa1140670:CDS |
| TTATCTAGGCATGTTTCATT+GGG | 0.431278 | 7_4:+12559948 | Msa1140670:three_prime_UTR |
| CATAGAAAACATTCATGGCT+TGG | 0.432509 | 7_4:-12559565 | None:intergenic |
| TTCATGTTACTGATCAAAAT+GGG | 0.434204 | 7_4:+12557275 | Msa1140670:CDS |
| TACATCACCGACGACACAAC+AGG | 0.443441 | 7_4:+12558121 | Msa1140670:CDS |
| ATTTGGTTGGGAGATAGAAT+TGG | 0.446485 | 7_4:-12556512 | None:intergenic |
| TTAATCTTGGCAAGGCGGTC+AGG | 0.450576 | 7_4:-12558160 | None:intergenic |
| GATCGGAAGCTACGGACTCT+TGG | 0.452011 | 7_4:-12557926 | None:intergenic |
| TGTCACATAGAAAACATTCA+TGG | 0.454766 | 7_4:-12559570 | None:intergenic |
| TGTAGCTGATAGAATTCAAC+AGG | 0.458713 | 7_4:+12557318 | Msa1140670:CDS |
| AGATAGAATTGGTGAGATGA+TGG | 0.465467 | 7_4:-12556501 | None:intergenic |
| AGGAACTCTTGACCCTGCTT+AGG | 0.466686 | 7_4:+12556466 | Msa1140670:five_prime_UTR |
| TCAATTGATGTATGCTGATC+GGG | 0.471630 | 7_4:+12558279 | Msa1140670:CDS |
| CGGGATTATGACATATATGA+TGG | 0.473270 | 7_4:+12558298 | Msa1140670:CDS |
| AAGCAGAAGATGCTTAATCT+TGG | 0.477322 | 7_4:-12558173 | None:intergenic |
| ATATTTCATCTGATGGTGGA+TGG | 0.481369 | 7_4:+12557097 | Msa1140670:CDS |
| TAATAAACGTGGTAGTTTGT+TGG | 0.488332 | 7_4:+12557026 | Msa1140670:CDS |
| ATAGAAAACATTCATGGCTT+GGG | 0.492504 | 7_4:-12559564 | None:intergenic |
| GCAAAGAGTAATTCACTGCT+TGG | 0.493494 | 7_4:+12559087 | Msa1140670:CDS |
| GATAGAATTGGTGAGATGAT+GGG | 0.501454 | 7_4:-12556500 | None:intergenic |
| ACATGTTATTGTTACCTTGG+TGG | 0.506079 | 7_4:-12556763 | None:intergenic |
| GTACCTCAGAAGTTCGCCTT+CGG | 0.506198 | 7_4:-12559120 | None:intergenic |
| GAAAATTTAACTGCAAATGT+TGG | 0.508292 | 7_4:+12560070 | Msa1140670:three_prime_UTR |
| ACTCGCATCTTTAGAGAAAA+CGG | 0.512341 | 7_4:+12559503 | Msa1140670:CDS |
| AGAGCTTATATTTCATCTGA+TGG | 0.514352 | 7_4:+12557090 | Msa1140670:CDS |
| TTTGTTCGACTCACAAGGAT+AGG | 0.516487 | 7_4:+12558248 | Msa1140670:CDS |
| ATTGGTGAGATGATGGGGTA+GGG | 0.517260 | 7_4:-12556494 | None:intergenic |
| AGGCTGTTCGAAAAGAGATC+GGG | 0.523994 | 7_4:+12559630 | Msa1140670:CDS |
| GAGGCTGTTCGAAAAGAGAT+CGG | 0.525177 | 7_4:+12559629 | Msa1140670:CDS |
| GATATACCGTCGTGAATTTG+AGG | 0.531940 | 7_4:+12558389 | Msa1140670:CDS |
| GCTTGGAGGCTGCTGTCCGA+AGG | 0.534469 | 7_4:+12559104 | Msa1140670:CDS |
| CGGCAATCCTGTTGTGTCGT+CGG | 0.534641 | 7_4:-12558128 | None:intergenic |
| TGCGAGTTACATCAGACAAA+AGG | 0.535705 | 7_4:-12559487 | None:intergenic |
| TTCTCACGGATCGGAAGCTA+CGG | 0.542549 | 7_4:-12557934 | None:intergenic |
| CTTCAGCATTGACAGTTCCA+TGG | 0.546213 | 7_4:-12558480 | None:intergenic |
| AAGAGTAATTCACTGCTTGG+AGG | 0.549558 | 7_4:+12559090 | Msa1140670:CDS |
| ATAGAATTGGTGAGATGATG+GGG | 0.550082 | 7_4:-12556499 | None:intergenic |
| CGCGCTGAGGTCACGACAAG+AGG | 0.553071 | 7_4:+12559539 | Msa1140670:CDS |
| CCTCAAATGCAATGTGGTAG+CGG | 0.554458 | 7_4:+12558057 | Msa1140670:CDS |
| CAATCAGTTCTGAAGCAGAA+AGG | 0.556036 | 7_4:+12559065 | Msa1140670:CDS |
| TTCTATGTGACAGATGTGTC+CGG | 0.558668 | 7_4:+12559581 | Msa1140670:CDS |
| CATGCTTAAAATCTCCTACC+CGG | 0.562239 | 7_4:+12559681 | Msa1140670:CDS |
| CTGGACACACAATTCAAGAA+TGG | 0.562636 | 7_4:+12558087 | Msa1140670:CDS |
| TTTCAAATTCATCATCAAGA+GGG | 0.563709 | 7_4:-12556720 | None:intergenic |
| ATGCTTAAAATCTCCTACCC+GGG | 0.565650 | 7_4:+12559682 | Msa1140670:CDS |
| AATTGGTGAGATGATGGGGT+AGG | 0.566950 | 7_4:-12556495 | None:intergenic |
| AAGGCCAACTCTGTCTTCAC+CGG | 0.577698 | 7_4:-12559468 | None:intergenic |
| GTTCGACTCACAAGGATAGG+AGG | 0.577855 | 7_4:+12558251 | Msa1140670:CDS |
| AAATCTCCTACCCGGGAGAG+TGG | 0.578530 | 7_4:+12559689 | Msa1140670:CDS |
| GGTAGGGTGGCTCCTAAGCA+GGG | 0.579918 | 7_4:-12556478 | None:intergenic |
| TGTCCGAAGGCGAACTTCTG+AGG | 0.586828 | 7_4:+12559117 | Msa1140670:CDS |
| ATCAATTGATGTATGCTGAT+CGG | 0.588153 | 7_4:+12558278 | Msa1140670:CDS |
| ATCTGTCGGTGTTCAAGCTG+CGG | 0.596760 | 7_4:+12557958 | Msa1140670:CDS |
| AGTTAAGAGTGAAACAATTG+AGG | 0.598247 | 7_4:+12559610 | Msa1140670:CDS |
| TATTACATAAGGCATGTGGA+TGG | 0.599573 | 7_4:+12559037 | Msa1140670:CDS |
| TAGATTGTAAAGAAACCTCT+CGG | 0.604791 | 7_4:-12559747 | None:intergenic |
| GGTGAGATGATGGGGTAGGG+TGG | 0.605342 | 7_4:-12556491 | None:intergenic |
| CCTTTCAGTCTGCCGCGCTG+AGG | 0.608957 | 7_4:+12559526 | Msa1140670:CDS |
| CTTTCCGGTGAAGACAGAGT+TGG | 0.609309 | 7_4:+12559464 | Msa1140670:CDS |
| TTAACAGGACGAGATAGGCC+AGG | 0.610170 | 7_4:+12558001 | Msa1140670:CDS |
| CATGGAACTGTCAATGCTGA+AGG | 0.610676 | 7_4:+12558481 | Msa1140670:CDS |
| CGACAGATCTTCTCACGGAT+CGG | 0.618439 | 7_4:-12557943 | None:intergenic |
| GCTTATATTTCATCTGATGG+TGG | 0.619057 | 7_4:+12557093 | Msa1140670:CDS |
| AGGCGGTCAGGATTGTCGAT+CGG | 0.626180 | 7_4:-12558148 | None:intergenic |
| GGAATATTACATAAGGCATG+TGG | 0.628289 | 7_4:+12559033 | Msa1140670:intron |
| GATGGTGGATGGTTTATGGA+TGG | 0.634152 | 7_4:+12557108 | Msa1140670:CDS |
| GAAGATGCTTAATCTTGGCA+AGG | 0.637572 | 7_4:-12558168 | None:intergenic |
| AGTGTTGTGTTGTGTCTCTG+TGG | 0.638496 | 7_4:-12556604 | None:intergenic |
| AACACCGACAGATCTTCTCA+CGG | 0.646279 | 7_4:-12557948 | None:intergenic |
| CGATCCGTGAGAAGATCTGT+CGG | 0.650412 | 7_4:+12557944 | Msa1140670:CDS |
| ACGGTATCGAATAGTAACTT+CGG | 0.652560 | 7_4:-12558424 | None:intergenic |
| CATGTCTGTGATAGTACACA+CGG | 0.656721 | 7_4:-12558443 | None:intergenic |
| CTTCTGCTTTATGTGCTGAG+AGG | 0.660385 | 7_4:+12558187 | Msa1140670:CDS |
| ATGCAGTATGTTGTGTACCA+TGG | 0.674170 | 7_4:+12558463 | Msa1140670:CDS |
| AGACAACAAGTATATGACAC+AGG | 0.684297 | 7_4:-12559989 | None:intergenic |
| GATGCTTAATCTTGGCAAGG+CGG | 0.685591 | 7_4:-12558165 | None:intergenic |
| GTTGATAGTGCTAATAAACG+TGG | 0.727553 | 7_4:+12557015 | Msa1140670:CDS |
| TGCTGACCTCAAATGCAATG+TGG | 0.737650 | 7_4:+12558051 | Msa1140670:CDS |
| TGGACACCTCAAATTCACGA+CGG | 0.751563 | 7_4:-12558395 | None:intergenic |
| TCGTTAGGTCGAGATCCGAG+AGG | 0.772248 | 7_4:+12559732 | Msa1140670:CDS |
| CTCTTGTCGTGACCTCAGCG+CGG | 0.773509 | 7_4:-12559538 | None:intergenic |
| TAATTCGTATGAATCCACCA+AGG | 0.787268 | 7_4:+12556749 | Msa1140670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGATATTTTCTTATTTTAT+CGG | + | chr7_4:12557437-12557456 | Msa1140670:intron | 10.0% |
| !!! | ATTTGTGTTTTTTTTTTTTG+GGG | - | chr7_4:12556546-12556565 | None:intergenic | 15.0% |
| !!! | GATTTGTGTTTTTTTTTTTT+GGG | - | chr7_4:12556547-12556566 | None:intergenic | 15.0% |
| !!! | TTTGAAATTTAAACCTTATA+AGG | + | chr7_4:12556917-12556936 | Msa1140670:intron | 15.0% |
| !! | AAATGAAGAATTATTGTAAA+TGG | - | chr7_4:12557147-12557166 | None:intergenic | 15.0% |
| !!! | ATTTGTTATGATTGTAATTT+AGG | + | chr7_4:12557387-12557406 | Msa1140670:intron | 15.0% |
| !!! | AGAATTTTTTTATATCAAGT+AGG | + | chr7_4:12558715-12558734 | Msa1140670:intron | 15.0% |
| !! | TTTCTCTCATTAATTATTTA+CGG | + | chr7_4:12559209-12559228 | Msa1140670:intron | 15.0% |
| !!! | TTTGTGTTTTTTTTTTTTGG+GGG | - | chr7_4:12556545-12556564 | None:intergenic | 20.0% |
| !!! | GGATTTGTGTTTTTTTTTTT+TGG | - | chr7_4:12556548-12556567 | None:intergenic | 20.0% |
| !!! | TTGTATGTTTTTGTATTTTG+TGG | + | chr7_4:12556844-12556863 | Msa1140670:intron | 20.0% |
| !! | TCAAAGATTATAACCTTATA+AGG | - | chr7_4:12556933-12556952 | None:intergenic | 20.0% |
| !! | AATCTTTGATGAATTTCAAA+AGG | + | chr7_4:12556944-12556963 | Msa1140670:intron | 20.0% |
| !! | ATCTTTGATGAATTTCAAAA+GGG | + | chr7_4:12556945-12556964 | Msa1140670:intron | 20.0% |
| !!! | CTTTTATATTGTGGTAAAAT+CGG | - | chr7_4:12557588-12557607 | None:intergenic | 20.0% |
| !! | TAGAGTAATATAAACTATCA+TGG | - | chr7_4:12557628-12557647 | None:intergenic | 20.0% |
| !!! | TCAATTTTCATCATACTATT+TGG | + | chr7_4:12557675-12557694 | Msa1140670:intron | 20.0% |
| !!! | TGTTTACTAATAACACTTTT+TGG | + | chr7_4:12557880-12557899 | Msa1140670:intron | 20.0% |
| !!! | GATATTTTTAAAATACCGTT+CGG | - | chr7_4:12558627-12558646 | None:intergenic | 20.0% |
| !! | AAAATGGATAAAATTAGCAA+AGG | - | chr7_4:12558744-12558763 | None:intergenic | 20.0% |
| !!! | GTATTTCATTTCAATTTGTT+TGG | + | chr7_4:12558913-12558932 | Msa1140670:intron | 20.0% |
| !!! | TTTTACAGGAATATTACATA+AGG | + | chr7_4:12559026-12559045 | Msa1140670:intron | 20.0% |
| !!! | AGTTAACTTGTATTTGATAT+AGG | + | chr7_4:12559427-12559446 | Msa1140670:intron | 20.0% |
| !!! | GTTAACTTGTATTTGATATA+GGG | + | chr7_4:12559428-12559447 | Msa1140670:intron | 20.0% |
| !!! | TTTAGTTTCAACTAGAATTT+AGG | + | chr7_4:12559832-12559851 | Msa1140670:intron | 20.0% |
| !! | TCTTTGTACCTTTGAAAATT+GGG | - | chr7_4:12556569-12556588 | None:intergenic | 25.0% |
| !! | TTCTTTGTACCTTTGAAAAT+TGG | - | chr7_4:12556570-12556589 | None:intergenic | 25.0% |
| !! | TGTTTCAAACTATGGATTTT+TGG | + | chr7_4:12556686-12556705 | Msa1140670:exon | 25.0% |
| ! | TTTCAAATTCATCATCAAGA+GGG | - | chr7_4:12556723-12556742 | None:intergenic | 25.0% |
| !! | TTTTCAAATTCATCATCAAG+AGG | - | chr7_4:12556724-12556743 | None:intergenic | 25.0% |
| !! | TTTTCATGTGAATTTTGTGT+AGG | + | chr7_4:12556993-12557012 | Msa1140670:intron | 25.0% |
| ! | GAAGAATTATTGTAAATGGT+AGG | - | chr7_4:12557143-12557162 | None:intergenic | 25.0% |
| ! | TTTCATGTTACTGATCAAAA+TGG | + | chr7_4:12557274-12557293 | Msa1140670:CDS | 25.0% |
| ! | TTCATGTTACTGATCAAAAT+GGG | + | chr7_4:12557275-12557294 | Msa1140670:CDS | 25.0% |
| ! | TAGATCTGTGTAATATTCAT+CGG | + | chr7_4:12557344-12557363 | Msa1140670:intron | 25.0% |
| !! | TGTGATCAACTTTTATATTG+TGG | - | chr7_4:12557597-12557616 | None:intergenic | 25.0% |
| !!! | AAAAAAAAAAGCACTAGTTC+TGG | - | chr7_4:12557834-12557853 | None:intergenic | 25.0% |
| !!! | AACTAGTGCTTTTTTTTTTG+AGG | + | chr7_4:12557835-12557854 | Msa1140670:intron | 25.0% |
| ! | GTTATTAGTAAACAAAGTTC+TGG | - | chr7_4:12557874-12557893 | None:intergenic | 25.0% |
| ! | TTAGTTACAAACTAGATACA+AGG | + | chr7_4:12558670-12558689 | Msa1140670:intron | 25.0% |
| ! | TTTAATGATAACTTGAGTGA+TGG | - | chr7_4:12558983-12559002 | None:intergenic | 25.0% |
| ! | CTTGCATTTATCAATAAAGA+GGG | + | chr7_4:12559281-12559300 | Msa1140670:intron | 25.0% |
| ! | TACGCAAATATTAAGAAAAG+AGG | - | chr7_4:12559311-12559330 | None:intergenic | 25.0% |
| ! | TTTGTCACTAAAAATACTGA+TGG | - | chr7_4:12559408-12559427 | None:intergenic | 25.0% |
| !!! | TAGATTGTAGAGTTTTATCT+AGG | + | chr7_4:12559934-12559953 | Msa1140670:three_prime_UTR | 25.0% |
| !! | AGAAGCTTATTTCAAACTTT+TGG | - | chr7_4:12560040-12560059 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTTTGGGGGCTT+TGG | - | chr7_4:12556539-12556558 | None:intergenic | 30.0% |
| ! | ACACAAATCCCAATTTTCAA+AGG | + | chr7_4:12556558-12556577 | Msa1140670:five_prime_UTR | 30.0% |
| TTCTGTTCTGTTTCAAACTA+TGG | + | chr7_4:12556678-12556697 | Msa1140670:exon | 30.0% | |
| AGAACATGTTATTGTTACCT+TGG | - | chr7_4:12556769-12556788 | None:intergenic | 30.0% | |
| CAGAACAACAACTTTGATAA+AGG | + | chr7_4:12556894-12556913 | Msa1140670:CDS | 30.0% | |
| ! | TAATAAACGTGGTAGTTTGT+TGG | + | chr7_4:12557026-12557045 | Msa1140670:CDS | 30.0% |
| AGAGCTTATATTTCATCTGA+TGG | + | chr7_4:12557090-12557109 | Msa1140670:CDS | 30.0% | |
| ! | TTTAGTCATTGCCTTTTGAT+TGG | + | chr7_4:12557700-12557719 | Msa1140670:intron | 30.0% |
| ATCATCCTATTCCAATCAAA+AGG | - | chr7_4:12557714-12557733 | None:intergenic | 30.0% | |
| ATCAATTGATGTATGCTGAT+CGG | + | chr7_4:12558278-12558297 | Msa1140670:CDS | 30.0% | |
| TCAAATTCGATCATTCTATC+AGG | + | chr7_4:12558780-12558799 | Msa1140670:intron | 30.0% | |
| CAAATTCGATCATTCTATCA+GGG | + | chr7_4:12558781-12558800 | Msa1140670:intron | 30.0% | |
| !!! | TGTGTTTTGCTTTGTTTTAC+AGG | + | chr7_4:12559012-12559031 | Msa1140670:intron | 30.0% |
| GATGTGTTAGAATGATAAAG+CGG | - | chr7_4:12559168-12559187 | None:intergenic | 30.0% | |
| GCTTGCATTTATCAATAAAG+AGG | + | chr7_4:12559280-12559299 | Msa1140670:intron | 30.0% | |
| ATAGAAAACATTCATGGCTT+GGG | - | chr7_4:12559567-12559586 | None:intergenic | 30.0% | |
| TGTCACATAGAAAACATTCA+TGG | - | chr7_4:12559573-12559592 | None:intergenic | 30.0% | |
| TCAATTGTTTCACTCTTAAC+TGG | - | chr7_4:12559611-12559630 | None:intergenic | 30.0% | |
| AGTTAAGAGTGAAACAATTG+AGG | + | chr7_4:12559610-12559629 | Msa1140670:CDS | 30.0% | |
| TAGATTGTAAAGAAACCTCT+CGG | - | chr7_4:12559750-12559769 | None:intergenic | 30.0% | |
| CCATAAAATACTACAATGTG+AGG | - | chr7_4:12559869-12559888 | None:intergenic | 30.0% | |
| ! | CCTCACATTGTAGTATTTTA+TGG | + | chr7_4:12559866-12559885 | Msa1140670:intron | 30.0% |
| TTTATCTAGGCATGTTTCAT+TGG | + | chr7_4:12559947-12559966 | Msa1140670:three_prime_UTR | 30.0% | |
| TTATCTAGGCATGTTTCATT+GGG | + | chr7_4:12559948-12559967 | Msa1140670:three_prime_UTR | 30.0% | |
| ATAGAATTGGTGAGATGATG+GGG | - | chr7_4:12556502-12556521 | None:intergenic | 35.0% | |
| GATAGAATTGGTGAGATGAT+GGG | - | chr7_4:12556503-12556522 | None:intergenic | 35.0% | |
| AGATAGAATTGGTGAGATGA+TGG | - | chr7_4:12556504-12556523 | None:intergenic | 35.0% | |
| ATTTGGTTGGGAGATAGAAT+TGG | - | chr7_4:12556515-12556534 | None:intergenic | 35.0% | |
| !!! | TGTGTGTGTGTGTTTTTTTG+GGG | - | chr7_4:12556644-12556663 | None:intergenic | 35.0% |
| !!! | GTGTGTGTGTGTGTTTTTTT+GGG | - | chr7_4:12556645-12556664 | None:intergenic | 35.0% |
| !!! | TGTGTGTGTGTGTGTTTTTT+TGG | - | chr7_4:12556646-12556665 | None:intergenic | 35.0% |
| TAATTCGTATGAATCCACCA+AGG | + | chr7_4:12556749-12556768 | Msa1140670:CDS | 35.0% | |
| ACATGTTATTGTTACCTTGG+TGG | - | chr7_4:12556766-12556785 | None:intergenic | 35.0% | |
| !! | GTTGATAGTGCTAATAAACG+TGG | + | chr7_4:12557015-12557034 | Msa1140670:CDS | 35.0% |
| GCTTATATTTCATCTGATGG+TGG | + | chr7_4:12557093-12557112 | Msa1140670:CDS | 35.0% | |
| !! | ATATTTCATCTGATGGTGGA+TGG | + | chr7_4:12557097-12557116 | Msa1140670:CDS | 35.0% |
| TGTAGCTGATAGAATTCAAC+AGG | + | chr7_4:12557318-12557337 | Msa1140670:CDS | 35.0% | |
| AAGCATATTTCCATGATTCC+CGG | + | chr7_4:12557491-12557510 | Msa1140670:intron | 35.0% | |
| !! | CATTGCCTTTTGATTGGAAT+AGG | + | chr7_4:12557706-12557725 | Msa1140670:intron | 35.0% |
| AAGCAGAAGATGCTTAATCT+TGG | - | chr7_4:12558176-12558195 | None:intergenic | 35.0% | |
| TCAATTGATGTATGCTGATC+GGG | + | chr7_4:12558279-12558298 | Msa1140670:CDS | 35.0% | |
| CGGGATTATGACATATATGA+TGG | + | chr7_4:12558298-12558317 | Msa1140670:CDS | 35.0% | |
| !! | GTTGATGATTGCATCGATAA+AGG | + | chr7_4:12558367-12558386 | Msa1140670:CDS | 35.0% |
| ! | ACGGTATCGAATAGTAACTT+CGG | - | chr7_4:12558427-12558446 | None:intergenic | 35.0% |
| GTCATTCATGTTCTTGCAAT+TGG | + | chr7_4:12558524-12558543 | Msa1140670:intron | 35.0% | |
| AGAGAAGCTCAAAATAAGTC+AGG | - | chr7_4:12558581-12558600 | None:intergenic | 35.0% | |
| ! | CGGCTTAACATCTTCTTTTA+AGG | - | chr7_4:12558607-12558626 | None:intergenic | 35.0% |
| AAAGAAGATGTTAAGCCGAA+CGG | + | chr7_4:12558609-12558628 | Msa1140670:intron | 35.0% | |
| GGAATATTACATAAGGCATG+TGG | + | chr7_4:12559033-12559052 | Msa1140670:intron | 35.0% | |
| TATTACATAAGGCATGTGGA+TGG | + | chr7_4:12559037-12559056 | Msa1140670:CDS | 35.0% | |
| ! | ACCTTAAACGACTGTTGATT+TGG | + | chr7_4:12559334-12559353 | Msa1140670:intron | 35.0% |
| TCCAAATCAACAGTCGTTTA+AGG | - | chr7_4:12559338-12559357 | None:intergenic | 35.0% | |
| TGTGAGTACTACATATGACA+TGG | + | chr7_4:12559359-12559378 | Msa1140670:intron | 35.0% | |
| ! | ACTCGCATCTTTAGAGAAAA+CGG | + | chr7_4:12559503-12559522 | Msa1140670:CDS | 35.0% |
| CATAGAAAACATTCATGGCT+TGG | - | chr7_4:12559568-12559587 | None:intergenic | 35.0% | |
| TTCACTCTTAACTGGATTTC+CGG | - | chr7_4:12559603-12559622 | None:intergenic | 35.0% | |
| GAGAGGTTTCTTTACAATCT+AGG | + | chr7_4:12559749-12559768 | Msa1140670:CDS | 35.0% | |
| AGACAACAAGTATATGACAC+AGG | - | chr7_4:12559992-12560011 | None:intergenic | 35.0% | |
| !!! | TTTTTGGGGGCTTTGGAATT+TGG | - | chr7_4:12556532-12556551 | None:intergenic | 40.0% |
| ! | ATTTTGTGGCAGAGTAACTG+TGG | + | chr7_4:12556858-12556877 | Msa1140670:intron | 40.0% |
| !! | ATCTGATGGTGGATGGTTTA+TGG | + | chr7_4:12557104-12557123 | Msa1140670:CDS | 40.0% |
| CAGCAATAAATCGGTCTCAA+AGG | + | chr7_4:12557521-12557540 | Msa1140670:intron | 40.0% | |
| TGTGGTAAAATCGGCAAATG+TGG | - | chr7_4:12557579-12557598 | None:intergenic | 40.0% | |
| ! | GTTTTCTTGTTCCAGTCACT+TGG | + | chr7_4:12557902-12557921 | Msa1140670:intron | 40.0% |
| CATACAACGATCGAGTTAAC+AGG | + | chr7_4:12557986-12558005 | Msa1140670:CDS | 40.0% | |
| ! | AAGACTTCTGAAAGCAATCC+TGG | - | chr7_4:12558022-12558041 | None:intergenic | 40.0% |
| CTGGACACACAATTCAAGAA+TGG | + | chr7_4:12558087-12558106 | Msa1140670:CDS | 40.0% | |
| GAAGATGCTTAATCTTGGCA+AGG | - | chr7_4:12558171-12558190 | None:intergenic | 40.0% | |
| !! | TTCGTTTTGTTCGACTCACA+AGG | + | chr7_4:12558243-12558262 | Msa1140670:CDS | 40.0% |
| TTTGTTCGACTCACAAGGAT+AGG | + | chr7_4:12558248-12558267 | Msa1140670:CDS | 40.0% | |
| GATATACCGTCGTGAATTTG+AGG | + | chr7_4:12558389-12558408 | Msa1140670:CDS | 40.0% | |
| AATAGTAACTTCGGTCGATC+TGG | - | chr7_4:12558418-12558437 | None:intergenic | 40.0% | |
| CATGTCTGTGATAGTACACA+CGG | - | chr7_4:12558446-12558465 | None:intergenic | 40.0% | |
| ATGCAGTATGTTGTGTACCA+TGG | + | chr7_4:12558463-12558482 | Msa1140670:CDS | 40.0% | |
| ! | TGAAGGAACAGAAGCATATC+AGG | + | chr7_4:12558498-12558517 | Msa1140670:CDS | 40.0% |
| TAGAAAGGATGCGTCAGAAT+AGG | - | chr7_4:12558947-12558966 | None:intergenic | 40.0% | |
| CTTTCTGCTTCAGAACTGAT+TGG | - | chr7_4:12559067-12559086 | None:intergenic | 40.0% | |
| !! | CAATCAGTTCTGAAGCAGAA+AGG | + | chr7_4:12559065-12559084 | Msa1140670:CDS | 40.0% |
| GCAAAGAGTAATTCACTGCT+TGG | + | chr7_4:12559087-12559106 | Msa1140670:CDS | 40.0% | |
| AAGAGTAATTCACTGCTTGG+AGG | + | chr7_4:12559090-12559109 | Msa1140670:CDS | 40.0% | |
| TGATAAAGCGGCGCTTAATT+TGG | - | chr7_4:12559156-12559175 | None:intergenic | 40.0% | |
| TGCGAGTTACATCAGACAAA+AGG | - | chr7_4:12559490-12559509 | None:intergenic | 40.0% | |
| TTCTATGTGACAGATGTGTC+CGG | + | chr7_4:12559581-12559600 | Msa1140670:CDS | 40.0% | |
| CATGCTTAAAATCTCCTACC+CGG | + | chr7_4:12559681-12559700 | Msa1140670:CDS | 40.0% | |
| ATGCTTAAAATCTCCTACCC+GGG | + | chr7_4:12559682-12559701 | Msa1140670:CDS | 40.0% | |
| ! | AAGAGAATTTTCCACTCTCC+CGG | - | chr7_4:12559703-12559722 | None:intergenic | 40.0% |
| TCTCTTTACGTGATCTCGTT+AGG | + | chr7_4:12559717-12559736 | Msa1140670:CDS | 40.0% | |
| !! | ATTGGTGAGATGATGGGGTA+GGG | - | chr7_4:12556497-12556516 | None:intergenic | 45.0% |
| !! | AATTGGTGAGATGATGGGGT+AGG | - | chr7_4:12556498-12556517 | None:intergenic | 45.0% |
| AGTGTTGTGTTGTGTCTCTG+TGG | - | chr7_4:12556607-12556626 | None:intergenic | 45.0% | |
| !! | GATGGTGGATGGTTTATGGA+TGG | + | chr7_4:12557108-12557127 | Msa1140670:CDS | 45.0% |
| CGACATCACAACCACAATTG+CGG | + | chr7_4:12557553-12557572 | Msa1140670:intron | 45.0% | |
| AACACCGACAGATCTTCTCA+CGG | - | chr7_4:12557951-12557970 | None:intergenic | 45.0% | |
| TCGAGTTAACAGGACGAGAT+AGG | + | chr7_4:12557996-12558015 | Msa1140670:CDS | 45.0% | |
| TGCTGACCTCAAATGCAATG+TGG | + | chr7_4:12558051-12558070 | Msa1140670:CDS | 45.0% | |
| CCTCAAATGCAATGTGGTAG+CGG | + | chr7_4:12558057-12558076 | Msa1140670:CDS | 45.0% | |
| GATGCTTAATCTTGGCAAGG+CGG | - | chr7_4:12558168-12558187 | None:intergenic | 45.0% | |
| CTTCTGCTTTATGTGCTGAG+AGG | + | chr7_4:12558187-12558206 | Msa1140670:CDS | 45.0% | |
| TGGACACCTCAAATTCACGA+CGG | - | chr7_4:12558398-12558417 | None:intergenic | 45.0% | |
| !! | CTTCAGCATTGACAGTTCCA+TGG | - | chr7_4:12558483-12558502 | None:intergenic | 45.0% |
| CATGGAACTGTCAATGCTGA+AGG | + | chr7_4:12558481-12558500 | Msa1140670:CDS | 45.0% | |
| GGACTCATAAGCTGGTAGAA+AGG | - | chr7_4:12558962-12558981 | None:intergenic | 45.0% | |
| !! | TGAGTGATGGACTCATAAGC+TGG | - | chr7_4:12558970-12558989 | None:intergenic | 45.0% |
| ! | AAGCGGCGCTTAATTTGGAA+CGG | - | chr7_4:12559151-12559170 | None:intergenic | 45.0% |
| TGCAAGCTCGATAATGTCGT+TGG | - | chr7_4:12559267-12559286 | None:intergenic | 45.0% | |
| GGTGTAAAGCTCGAACTTTC+CGG | + | chr7_4:12559449-12559468 | Msa1140670:CDS | 45.0% | |
| GAGGCTGTTCGAAAAGAGAT+CGG | + | chr7_4:12559629-12559648 | Msa1140670:CDS | 45.0% | |
| AGGCTGTTCGAAAAGAGATC+GGG | + | chr7_4:12559630-12559649 | Msa1140670:CDS | 45.0% | |
| ! | CGGGTAGGAGATTTTAAGCA+TGG | - | chr7_4:12559683-12559702 | None:intergenic | 45.0% |
| ! | AGAGAATTTTCCACTCTCCC+GGG | - | chr7_4:12559702-12559721 | None:intergenic | 45.0% |
| !! | AAAAAATATTAAAAAAACAA+TGG | - | chr7_4:12557190-12557209 | None:intergenic | 5.0% |
| !! | GTTAAATATTAATAATAAAA+TGG | - | chr7_4:12558760-12558779 | None:intergenic | 5.0% |
| AGGAACTCTTGACCCTGCTT+AGG | + | chr7_4:12556466-12556485 | Msa1140670:five_prime_UTR | 50.0% | |
| !! | GGGGGCTTTGGAATTTGGTT+GGG | - | chr7_4:12556527-12556546 | None:intergenic | 50.0% |
| !! | TGGGGGCTTTGGAATTTGGT+TGG | - | chr7_4:12556528-12556547 | None:intergenic | 50.0% |
| ! | AGACCGATTTATTGCTGCCG+CGG | - | chr7_4:12557518-12557537 | None:intergenic | 50.0% |
| TTCTCACGGATCGGAAGCTA+CGG | - | chr7_4:12557937-12557956 | None:intergenic | 50.0% | |
| CGACAGATCTTCTCACGGAT+CGG | - | chr7_4:12557946-12557965 | None:intergenic | 50.0% | |
| CGATCCGTGAGAAGATCTGT+CGG | + | chr7_4:12557944-12557963 | Msa1140670:CDS | 50.0% | |
| ! | ATCTGTCGGTGTTCAAGCTG+CGG | + | chr7_4:12557958-12557977 | Msa1140670:CDS | 50.0% |
| TTAACAGGACGAGATAGGCC+AGG | + | chr7_4:12558001-12558020 | Msa1140670:CDS | 50.0% | |
| CCGCTACCACATTGCATTTG+AGG | - | chr7_4:12558060-12558079 | None:intergenic | 50.0% | |
| TACATCACCGACGACACAAC+AGG | + | chr7_4:12558121-12558140 | Msa1140670:CDS | 50.0% | |
| TTAATCTTGGCAAGGCGGTC+AGG | - | chr7_4:12558163-12558182 | None:intergenic | 50.0% | |
| GTTCGACTCACAAGGATAGG+AGG | + | chr7_4:12558251-12558270 | Msa1140670:CDS | 50.0% | |
| GTACCTCAGAAGTTCGCCTT+CGG | - | chr7_4:12559123-12559142 | None:intergenic | 50.0% | |
| ! | GGCGCTTAATTTGGAACGGA+GGG | - | chr7_4:12559147-12559166 | None:intergenic | 50.0% |
| CTTTCCGGTGAAGACAGAGT+TGG | + | chr7_4:12559464-12559483 | Msa1140670:CDS | 50.0% | |
| AAGGCCAACTCTGTCTTCAC+CGG | - | chr7_4:12559471-12559490 | None:intergenic | 50.0% | |
| ! | AATTTTCCACTCTCCCGGGT+AGG | - | chr7_4:12559698-12559717 | None:intergenic | 50.0% |
| TTTCCATGATTCCCGGTCCG+CGG | + | chr7_4:12557498-12557517 | Msa1140670:intron | 55.0% | |
| ATTTATTGCTGCCGCGGACC+GGG | - | chr7_4:12557512-12557531 | None:intergenic | 55.0% | |
| GATTTATTGCTGCCGCGGAC+CGG | - | chr7_4:12557513-12557532 | None:intergenic | 55.0% | |
| GGTCCGCGGCAGCAATAAAT+CGG | + | chr7_4:12557512-12557531 | Msa1140670:intron | 55.0% | |
| GGCAAATGTGGCCGCAATTG+TGG | - | chr7_4:12557567-12557586 | None:intergenic | 55.0% | |
| GGACTCTTGGACCAAGTGAC+TGG | - | chr7_4:12557916-12557935 | None:intergenic | 55.0% | |
| GATCGGAAGCTACGGACTCT+TGG | - | chr7_4:12557929-12557948 | None:intergenic | 55.0% | |
| !! | ATGTGGTAGCGGCTGAAGTC+TGG | + | chr7_4:12558068-12558087 | Msa1140670:CDS | 55.0% |
| CGGCAATCCTGTTGTGTCGT+CGG | - | chr7_4:12558131-12558150 | None:intergenic | 55.0% | |
| AGGCGGTCAGGATTGTCGAT+CGG | - | chr7_4:12558151-12558170 | None:intergenic | 55.0% | |
| TGTCCGAAGGCGAACTTCTG+AGG | + | chr7_4:12559117-12559136 | Msa1140670:CDS | 55.0% | |
| ! | CGGCGCTTAATTTGGAACGG+AGG | - | chr7_4:12559148-12559167 | None:intergenic | 55.0% |
| AAATCTCCTACCCGGGAGAG+TGG | + | chr7_4:12559689-12559708 | Msa1140670:CDS | 55.0% | |
| TCGTTAGGTCGAGATCCGAG+AGG | + | chr7_4:12559732-12559751 | Msa1140670:CDS | 55.0% | |
| GGTAGGGTGGCTCCTAAGCA+GGG | - | chr7_4:12556481-12556500 | None:intergenic | 60.0% | |
| !! | GGTGAGATGATGGGGTAGGG+TGG | - | chr7_4:12556494-12556513 | None:intergenic | 60.0% |
| CTCTTGTCGTGACCTCAGCG+CGG | - | chr7_4:12559541-12559560 | None:intergenic | 60.0% | |
| GGGTAGGGTGGCTCCTAAGC+AGG | - | chr7_4:12556482-12556501 | None:intergenic | 65.0% | |
| GCTTGGAGGCTGCTGTCCGA+AGG | + | chr7_4:12559104-12559123 | Msa1140670:CDS | 65.0% | |
| CCTCAGCGCGGCAGACTGAA+AGG | - | chr7_4:12559529-12559548 | None:intergenic | 65.0% | |
| CCTTTCAGTCTGCCGCGCTG+AGG | + | chr7_4:12559526-12559545 | Msa1140670:CDS | 65.0% | |
| CGCGCTGAGGTCACGACAAG+AGG | + | chr7_4:12559539-12559558 | Msa1140670:CDS | 65.0% | |
| CTGCCGCGGACCGGGAATCA+TGG | - | chr7_4:12557504-12557523 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 12556465 | 12560092 | 12556465 | ID=Msa1140670;Name=Msa1140670 |
| chr7_4 | mRNA | 12556465 | 12560092 | 12556465 | ID=Msa1140670-mRNA-1;Parent=Msa1140670;Name=Msa1140670-mRNA-1;_AED=0.11;_eAED=0.11;_QI=232|1|1|1|0.85|0.75|8|255|451 |
| chr7_4 | exon | 12556465 | 12556770 | 12556465 | ID=Msa1140670-mRNA-1:exon:3077;Parent=Msa1140670-mRNA-1 |
| chr7_4 | exon | 12556870 | 12556915 | 12556870 | ID=Msa1140670-mRNA-1:exon:3078;Parent=Msa1140670-mRNA-1 |
| chr7_4 | exon | 12557015 | 12557129 | 12557015 | ID=Msa1140670-mRNA-1:exon:3079;Parent=Msa1140670-mRNA-1 |
| chr7_4 | exon | 12557272 | 12557339 | 12557272 | ID=Msa1140670-mRNA-1:exon:3080;Parent=Msa1140670-mRNA-1 |
| chr7_4 | exon | 12557917 | 12558519 | 12557917 | ID=Msa1140670-mRNA-1:exon:3081;Parent=Msa1140670-mRNA-1 |
| chr7_4 | exon | 12559034 | 12559138 | 12559034 | ID=Msa1140670-mRNA-1:exon:3082;Parent=Msa1140670-mRNA-1 |
| chr7_4 | exon | 12559449 | 12559837 | 12559449 | ID=Msa1140670-mRNA-1:exon:3083;Parent=Msa1140670-mRNA-1 |
| chr7_4 | exon | 12559882 | 12560092 | 12559882 | ID=Msa1140670-mRNA-1:exon:3084;Parent=Msa1140670-mRNA-1 |
| chr7_4 | five_prime_UTR | 12556465 | 12556696 | 12556465 | ID=Msa1140670-mRNA-1:five_prime_utr;Parent=Msa1140670-mRNA-1 |
| chr7_4 | CDS | 12556697 | 12556770 | 12556697 | ID=Msa1140670-mRNA-1:cds;Parent=Msa1140670-mRNA-1 |
| chr7_4 | CDS | 12556870 | 12556915 | 12556870 | ID=Msa1140670-mRNA-1:cds;Parent=Msa1140670-mRNA-1 |
| chr7_4 | CDS | 12557015 | 12557129 | 12557015 | ID=Msa1140670-mRNA-1:cds;Parent=Msa1140670-mRNA-1 |
| chr7_4 | CDS | 12557272 | 12557339 | 12557272 | ID=Msa1140670-mRNA-1:cds;Parent=Msa1140670-mRNA-1 |
| chr7_4 | CDS | 12557917 | 12558519 | 12557917 | ID=Msa1140670-mRNA-1:cds;Parent=Msa1140670-mRNA-1 |
| chr7_4 | CDS | 12559034 | 12559138 | 12559034 | ID=Msa1140670-mRNA-1:cds;Parent=Msa1140670-mRNA-1 |
| chr7_4 | CDS | 12559449 | 12559793 | 12559449 | ID=Msa1140670-mRNA-1:cds;Parent=Msa1140670-mRNA-1 |
| chr7_4 | three_prime_UTR | 12559794 | 12559837 | 12559794 | ID=Msa1140670-mRNA-1:three_prime_utr;Parent=Msa1140670-mRNA-1 |
| chr7_4 | three_prime_UTR | 12559882 | 12560092 | 12559882 | ID=Msa1140670-mRNA-1:three_prime_utr;Parent=Msa1140670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
