Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152170 | XP_039685079.1 | 78.367 | 698 | 113 | 2 | 1 | 694 | 20 | 683 | 0.0 | 1102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152170 | A0A396HF22 | 69.782 | 321 | 56 | 1 | 23 | 343 | 1 | 280 | 4.47e-149 | 444 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027680 | Msa1152170 | 0.951799 | 9.508408e-110 | -8.615850e-47 |
| Msa1025910 | Msa1152170 | 0.831114 | 2.005298e-55 | -8.615850e-47 |
| Msa0342760 | Msa1152170 | 0.813085 | 3.059596e-51 | -8.615850e-47 |
| Msa0352050 | Msa1152170 | 0.825300 | 5.052573e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152170 | MtrunA17_Chr6g0474521 | 69.782 | 321 | 56 | 1 | 23 | 343 | 1 | 280 | 8.60e-153 | 444 |
| Msa1152170 | MtrunA17_Chr1g0162981 | 62.838 | 148 | 51 | 1 | 237 | 380 | 1 | 148 | 9.60e-55 | 184 |
| Msa1152170 | MtrunA17_Chr4g0074621 | 97.222 | 72 | 2 | 0 | 1 | 72 | 20 | 91 | 2.86e-42 | 148 |
| Msa1152170 | MtrunA17_Chr1g0175971 | 97.222 | 72 | 2 | 0 | 1 | 72 | 20 | 91 | 2.86e-42 | 148 |
| Msa1152170 | MtrunA17_Chr7g0265121 | 34.426 | 183 | 113 | 2 | 3 | 179 | 9 | 190 | 6.88e-33 | 125 |
| Msa1152170 | MtrunA17_Chr4g0074611 | 34.426 | 183 | 113 | 2 | 3 | 179 | 9 | 190 | 6.88e-33 | 125 |
| Msa1152170 | MtrunA17_Chr8g0337461 | 91.837 | 49 | 4 | 0 | 1 | 49 | 20 | 68 | 4.37e-24 | 95.9 |
| Msa1152170 | MtrunA17_Chr4g0012881 | 26.339 | 224 | 147 | 7 | 12 | 227 | 38 | 251 | 7.82e-21 | 97.1 |
| Msa1152170 | MtrunA17_Chr6g0470871 | 53.448 | 58 | 27 | 0 | 4 | 61 | 16 | 73 | 7.04e-14 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152170 | AT4G15880.1 | 26.087 | 276 | 162 | 12 | 400 | 665 | 246 | 489 | 1.79e-11 | 67.4 |
| Msa1152170 | AT4G00690.1 | 24.434 | 221 | 134 | 9 | 458 | 665 | 141 | 341 | 2.58e-11 | 66.2 |
Find 182 sgRNAs with CRISPR-Local
Find 416 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGCTCTTAGTACCTATAAT+TGG | 0.159588 | 7_4:-37419115 | Msa1152170:CDS |
| GTTAATATCTACCAACTTAT+TGG | 0.179369 | 7_4:+37419580 | None:intergenic |
| GATACAGTTATACACATTTC+TGG | 0.200591 | 7_4:-37419020 | Msa1152170:CDS |
| CTAGACCTTTGTTTGGCTTT+AGG | 0.220943 | 7_4:-37419383 | Msa1152170:CDS |
| CAACGGTATTCATTCATTAA+TGG | 0.252334 | 7_4:+37419640 | None:intergenic |
| ATGCGTGGAAAACGCTTAAT+TGG | 0.267383 | 7_4:+37418851 | None:intergenic |
| TGAGGTAGTTGATGATTTAA+AGG | 0.268632 | 7_4:-37417595 | Msa1152170:CDS |
| AGATATGTTGGAATCTTCTT+TGG | 0.268674 | 7_4:-37416626 | Msa1152170:CDS |
| ACAAAGGTCTAGATGTTTAA+AGG | 0.286497 | 7_4:+37419394 | None:intergenic |
| TATATAGATAAAGGGGTATT+AGG | 0.287945 | 7_4:+37414653 | None:intergenic |
| AGAAATACATATATAGATAA+AGG | 0.290515 | 7_4:+37414644 | None:intergenic |
| TTAATATAACTGTGTGATTT+CGG | 0.290724 | 7_4:+37419170 | None:intergenic |
| GAGGATATTAAAAGCAAATA+AGG | 0.296971 | 7_4:-37418469 | Msa1152170:CDS |
| TGTGGGATGGTGAAGCAAAA+TGG | 0.309075 | 7_4:-37416436 | Msa1152170:CDS |
| CGCTCTTAGTACCTATAATT+GGG | 0.312086 | 7_4:-37419114 | Msa1152170:CDS |
| ATTTACCAAAGCAACAAAAT+TGG | 0.312599 | 7_4:-37416588 | Msa1152170:intron |
| TTATCGAAGGTCATATATAA+AGG | 0.331004 | 7_4:-37414585 | Msa1152170:three_prime_UTR |
| GCTTTAGGTTTGCCTATTGT+AGG | 0.336005 | 7_4:-37419368 | Msa1152170:CDS |
| GCTTAATTGGACCACTGGTT+AGG | 0.336914 | 7_4:+37418864 | None:intergenic |
| CATTGGAGTTTACGTCCTTC+AGG | 0.346042 | 7_4:+37417567 | None:intergenic |
| CCTTAGGTTATTAATATTGC+TGG | 0.350091 | 7_4:-37417782 | Msa1152170:intron |
| AACAGCAACACCCCAATTAT+AGG | 0.367016 | 7_4:+37419103 | None:intergenic |
| TCTATATATGTATTTCTTTG+AGG | 0.369379 | 7_4:-37414638 | Msa1152170:three_prime_UTR |
| ATGTCCAGTGGTCTTCGAAC+TGG | 0.369613 | 7_4:+37416888 | None:intergenic |
| AACCATTCTCAAGTTGGTAT+TGG | 0.370824 | 7_4:-37418603 | Msa1152170:CDS |
| ATAAAGGGGTATTAGGATAA+AGG | 0.373190 | 7_4:+37414660 | None:intergenic |
| AATAAAGGAGCGAACAATAA+AGG | 0.374187 | 7_4:-37416649 | Msa1152170:CDS |
| AACACAAAGATTTGCTTTCC+CGG | 0.375365 | 7_4:-37418515 | Msa1152170:CDS |
| GAAATACATATATAGATAAA+GGG | 0.379203 | 7_4:+37414645 | None:intergenic |
| GTAGATGAGTTGCGTGTTGC+CGG | 0.380253 | 7_4:-37417938 | Msa1152170:CDS |
| TGGTTGCCCAGCCGTATTGC+AGG | 0.381669 | 7_4:-37419000 | Msa1152170:intron |
| GTTTACCGGAAACTAGTGAT+AGG | 0.386283 | 7_4:-37419340 | Msa1152170:CDS |
| CTACGTTGTCCCCTTCTTGA+AGG | 0.389579 | 7_4:+37419243 | None:intergenic |
| TGCAGTATCTAATACAAATC+TGG | 0.391438 | 7_4:+37414806 | None:intergenic |
| CTTCCTACTTCCATGCTACT+TGG | 0.397148 | 7_4:+37418420 | None:intergenic |
| TGATTAGTTGGTTGAGGACT+TGG | 0.400972 | 7_4:-37418673 | Msa1152170:intron |
| GTGGGATGGTGAAGCAAAAT+GGG | 0.404332 | 7_4:-37416435 | Msa1152170:CDS |
| GTGGATATGAAGACCTATAT+AGG | 0.406234 | 7_4:-37419500 | Msa1152170:CDS |
| AAATGCCTCAAGGCAGCGTT+TGG | 0.407622 | 7_4:-37416804 | Msa1152170:CDS |
| GTAGTGGAATTGATGAATAA+AGG | 0.409455 | 7_4:-37416664 | Msa1152170:CDS |
| TTTGTCTAACTTGATTGTGC+TGG | 0.411331 | 7_4:-37414746 | Msa1152170:three_prime_UTR |
| CTAACCCTATCACTAGTTTC+CGG | 0.415358 | 7_4:+37419335 | None:intergenic |
| CAGTGAAATTGTTTGTCGTC+TGG | 0.416799 | 7_4:-37414853 | Msa1152170:CDS |
| AGTACCATTCATTCCTATAT+AGG | 0.420459 | 7_4:+37419487 | None:intergenic |
| TAAACATCTAGACCTTTGTT+TGG | 0.421249 | 7_4:-37419390 | Msa1152170:CDS |
| ACTTCCTCGCCTTCATGCAT+TGG | 0.432506 | 7_4:+37417906 | None:intergenic |
| GGAGTTGGATGATGATGATA+TGG | 0.432653 | 7_4:-37418169 | Msa1152170:CDS |
| TGATGATGATATGGCTGAAA+AGG | 0.433309 | 7_4:-37418160 | Msa1152170:CDS |
| TTTATTCTGCACACATGAAA+AGG | 0.433361 | 7_4:-37418091 | Msa1152170:CDS |
| CTTAATTGGACCACTGGTTA+GGG | 0.433873 | 7_4:+37418865 | None:intergenic |
| TAGGATTTAGAGTAGGCGTT+AGG | 0.437463 | 7_4:-37419424 | Msa1152170:CDS |
| AATGAATGGTACTTTATTGA+AGG | 0.438781 | 7_4:-37419477 | Msa1152170:CDS |
| ATCTACCAACTTATTGGTAC+GGG | 0.443644 | 7_4:+37419586 | None:intergenic |
| GGTATATGTTCTTAAGTACT+TGG | 0.444660 | 7_4:-37416462 | Msa1152170:CDS |
| TATGTTGGAATCTTCTTTGG+AGG | 0.445095 | 7_4:-37416623 | Msa1152170:CDS |
| TTCAATACCTGCAATACGGC+TGG | 0.445664 | 7_4:+37418993 | None:intergenic |
| TCTTCATATCCACAAGATAT+CGG | 0.446334 | 7_4:+37419510 | None:intergenic |
| AGCAAATAAGGTTGACGGTA+GGG | 0.449525 | 7_4:-37418457 | Msa1152170:CDS |
| TTGGAAGAAGAAAATGATGA+TGG | 0.450909 | 7_4:-37418261 | Msa1152170:CDS |
| TTCTTTGGAGGTTGTAGTGG+TGG | 0.452564 | 7_4:-37416611 | Msa1152170:CDS |
| TTTGCGCATCAGACAATGTT+CGG | 0.454164 | 7_4:+37419558 | None:intergenic |
| GGTAAACACTCTCCTACAAT+AGG | 0.455224 | 7_4:+37419356 | None:intergenic |
| TGAATTTCCGCTCAGTCCAT+TGG | 0.455335 | 7_4:+37417550 | None:intergenic |
| TTCTTAAGTACTTGGAGTTG+TGG | 0.459941 | 7_4:-37416454 | Msa1152170:CDS |
| AAGATTGATGCGGATAATGA+TGG | 0.460099 | 7_4:-37418366 | Msa1152170:CDS |
| TAGATGAGTTGCGTGTTGCC+GGG | 0.464352 | 7_4:-37417937 | Msa1152170:CDS |
| TTAATGTGATTAGTTGGTTG+AGG | 0.466558 | 7_4:-37418679 | Msa1152170:intron |
| AGGTGGGATGCAAGTAGCTT+AGG | 0.478297 | 7_4:-37419443 | Msa1152170:CDS |
| TCTTAAGTACTTGGAGTTGT+GGG | 0.482984 | 7_4:-37416453 | Msa1152170:CDS |
| TAATATTCGTTGGTGTATCA+TGG | 0.485490 | 7_4:-37414693 | Msa1152170:three_prime_UTR |
| AATATTCAATACCTGCAATA+CGG | 0.491166 | 7_4:+37418989 | None:intergenic |
| TATTGTAGGAGAGTGTTTAC+CGG | 0.495009 | 7_4:-37419354 | Msa1152170:CDS |
| AGAAAATGATGGGATGAAGT+TGG | 0.497063 | 7_4:-37418316 | Msa1152170:CDS |
| CATGTTACGTGTTGGACCAT+AGG | 0.497665 | 7_4:-37416868 | Msa1152170:CDS |
| TATCTACCAACTTATTGGTA+CGG | 0.500669 | 7_4:+37419585 | None:intergenic |
| TGAAGGAATTATTGCATAGG+TGG | 0.500937 | 7_4:-37419460 | Msa1152170:CDS |
| ACCAACTTGAGAATGGTTAA+CGG | 0.500987 | 7_4:+37418608 | None:intergenic |
| AACATGACCTCCATCCACTT+TGG | 0.501951 | 7_4:+37418817 | None:intergenic |
| AAGCTGAAGGTCCTTCAAGA+AGG | 0.502318 | 7_4:-37419254 | Msa1152170:CDS |
| ATCCTCAAGGATTGAAACCC+GGG | 0.502408 | 7_4:+37418497 | None:intergenic |
| GAAAAGGACAATGTATGTGC+TGG | 0.504029 | 7_4:-37416846 | Msa1152170:CDS |
| TAAAGACAATGGGATGGAGT+TGG | 0.505100 | 7_4:-37418184 | Msa1152170:CDS |
| CTCCAATACCAACTTGAGAA+TGG | 0.505693 | 7_4:+37418601 | None:intergenic |
| AGCATTACCAATGAATAGTC+GGG | 0.509033 | 7_4:+37416398 | None:intergenic |
| ATGGAAGAAGATAAAGACAA+TGG | 0.509362 | 7_4:-37418195 | Msa1152170:CDS |
| AAGCATTACCAATGAATAGT+CGG | 0.511109 | 7_4:+37416397 | None:intergenic |
| AAGACCTATATAGGAATGAA+TGG | 0.515117 | 7_4:-37419491 | Msa1152170:CDS |
| ATCTTCTTTGGAGGTTGTAG+TGG | 0.519883 | 7_4:-37416614 | Msa1152170:CDS |
| TGGAAGAAGATAAAGACAAT+GGG | 0.520727 | 7_4:-37418194 | Msa1152170:CDS |
| GCCGTTAACCATTCTCAAGT+TGG | 0.520859 | 7_4:-37418609 | Msa1152170:CDS |
| AGGTTATTAATATTGCTGGC+AGG | 0.523648 | 7_4:-37417778 | Msa1152170:CDS |
| ACTTACAGGAGGATATCCTT+CGG | 0.524242 | 7_4:-37414881 | Msa1152170:intron |
| TTAAAAGCAAATAAGGTTGA+CGG | 0.525394 | 7_4:-37418462 | Msa1152170:CDS |
| AACTCCGTTCCGATATCTTG+TGG | 0.528157 | 7_4:-37419519 | Msa1152170:CDS |
| GGAAAAGCAGAAGAAAATGA+TGG | 0.528960 | 7_4:-37418327 | Msa1152170:CDS |
| GATGGGTTGAAAAGTGAGGC+GGG | 0.530008 | 7_4:-37418348 | Msa1152170:CDS |
| CCGCAACGCCTCAAGTGTCT+TGG | 0.532629 | 7_4:+37417506 | None:intergenic |
| AATGCATGAAGGCGAGGAAG+TGG | 0.532769 | 7_4:-37417904 | Msa1152170:CDS |
| ATACCCGCGGATTTATTGAT+CGG | 0.534688 | 7_4:-37414780 | Msa1152170:CDS |
| AAAACGCTTAATTGGACCAC+TGG | 0.534869 | 7_4:+37418859 | None:intergenic |
| GAGTATGCCCGACTATTCAT+TGG | 0.535075 | 7_4:-37416405 | Msa1152170:intron |
| AGCTGAAGGTCCTTCAAGAA+GGG | 0.538805 | 7_4:-37419253 | Msa1152170:CDS |
| ACGTGTTGGACCATAGGAAA+AGG | 0.547405 | 7_4:-37416862 | Msa1152170:CDS |
| ATCTGTGGCTGCAAATTCAA+CGG | 0.548663 | 7_4:+37419623 | None:intergenic |
| GAACAATAAAGGAGATATGT+TGG | 0.549679 | 7_4:-37416638 | Msa1152170:CDS |
| CAATCCTTGAGGATGATATG+AGG | 0.550170 | 7_4:-37418488 | Msa1152170:CDS |
| CTTATATGGCTGAACATCAA+AGG | 0.550916 | 7_4:-37418548 | Msa1152170:CDS |
| TGTCCAGTGGTCTTCGAACT+GGG | 0.551007 | 7_4:+37416889 | None:intergenic |
| GGCATTTGAGTCTTTATCTG+TGG | 0.552622 | 7_4:+37419608 | None:intergenic |
| AGTAGCATGGAAGTAGGAAG+TGG | 0.553313 | 7_4:-37418417 | Msa1152170:CDS |
| ACACAAAGATTTGCTTTCCC+GGG | 0.556553 | 7_4:-37418514 | Msa1152170:CDS |
| TTTACCGGAAACTAGTGATA+GGG | 0.559975 | 7_4:-37419339 | Msa1152170:CDS |
| GAAGGAATTATTGCATAGGT+GGG | 0.560436 | 7_4:-37419459 | Msa1152170:CDS |
| TCAAGATATATATGCCTCGT+TGG | 0.560933 | 7_4:-37417530 | Msa1152170:CDS |
| TATTCCGATGCCAAGTAGCA+TGG | 0.561626 | 7_4:-37418430 | Msa1152170:CDS |
| TTCCCGGGTTTCAATCCTTG+AGG | 0.561883 | 7_4:-37418499 | Msa1152170:CDS |
| CATCCTCAAGGATTGAAACC+CGG | 0.563868 | 7_4:+37418496 | None:intergenic |
| AAGCAAATAAGGTTGACGGT+AGG | 0.567979 | 7_4:-37418458 | Msa1152170:CDS |
| AGAAAATGATGATGGGATGA+AGG | 0.570797 | 7_4:-37418253 | Msa1152170:CDS |
| ATTCCACTACCCCTTCAAAA+CGG | 0.572945 | 7_4:+37416677 | None:intergenic |
| AATGCCCCGTACCAATAAGT+TGG | 0.573173 | 7_4:-37419591 | Msa1152170:CDS |
| CAACCCAGTTCGAAGACCAC+TGG | 0.574509 | 7_4:-37416892 | Msa1152170:CDS |
| CATGATGAAGTTCGAAAACA+TGG | 0.575114 | 7_4:-37417746 | Msa1152170:CDS |
| AAATACATATATAGATAAAG+GGG | 0.575274 | 7_4:+37414646 | None:intergenic |
| ATATCCTCATATCATCCTCA+AGG | 0.575345 | 7_4:+37418484 | None:intergenic |
| TAACCGATCAATAAATCCGC+GGG | 0.579519 | 7_4:+37414777 | None:intergenic |
| TATGGCTGAACATCAAAGGT+TGG | 0.580692 | 7_4:-37418544 | Msa1152170:CDS |
| AGATGAGTTGCGTGTTGCCG+GGG | 0.584197 | 7_4:-37417936 | Msa1152170:CDS |
| TTGGTCCAATTGTTAATGCG+TGG | 0.585880 | 7_4:+37418836 | None:intergenic |
| ACTTCCATGCTACTTGGCAT+CGG | 0.586687 | 7_4:+37418426 | None:intergenic |
| AGAAGATAAAGACAATGGGA+TGG | 0.587623 | 7_4:-37418190 | Msa1152170:CDS |
| TATTGAAGGAATTATTGCAT+AGG | 0.587809 | 7_4:-37419463 | Msa1152170:CDS |
| CTGAAGGACGTAAACTCCAA+TGG | 0.587862 | 7_4:-37417566 | Msa1152170:CDS |
| AATTGAAAATCTTAGTAGTG+CGG | 0.588744 | 7_4:-37419069 | Msa1152170:CDS |
| GAAGGTTGATGATGAAGATG+TGG | 0.591676 | 7_4:-37418235 | Msa1152170:CDS |
| TAGTGTACATTCTAAGCTGA+AGG | 0.592478 | 7_4:-37419267 | Msa1152170:CDS |
| AACAATTGGACCAAAGTGGA+TGG | 0.592872 | 7_4:-37418827 | Msa1152170:CDS |
| GAAAAGCAGAAGAAAATGAT+GGG | 0.594943 | 7_4:-37418326 | Msa1152170:CDS |
| CAGTGGTCTTCGAACTGGGT+TGG | 0.595890 | 7_4:+37416893 | None:intergenic |
| ATGCATGAAGGCGAGGAAGT+GGG | 0.596800 | 7_4:-37417903 | Msa1152170:intron |
| GATTTAAAGGCACATCCTGA+AGG | 0.597377 | 7_4:-37417582 | Msa1152170:CDS |
| AGTAGCTTAGGATTTAGAGT+AGG | 0.598830 | 7_4:-37419431 | Msa1152170:CDS |
| CATTAACAATTGGACCAAAG+TGG | 0.599981 | 7_4:-37418831 | Msa1152170:CDS |
| TCAATACCTGCAATACGGCT+GGG | 0.600754 | 7_4:+37418994 | None:intergenic |
| TGATGAAGATGTTGGTGAAG+AGG | 0.600999 | 7_4:-37418292 | Msa1152170:CDS |
| CCACTGGACATGTTACGTGT+TGG | 0.601741 | 7_4:-37416876 | Msa1152170:CDS |
| TAGAGTAGGCGTTAGGACTG+TGG | 0.605350 | 7_4:-37419417 | Msa1152170:CDS |
| ATGCCAAGTAGCATGGAAGT+AGG | 0.607349 | 7_4:-37418423 | Msa1152170:CDS |
| GGAAGTGGGTCAAAACATGT+AGG | 0.610645 | 7_4:-37418402 | Msa1152170:CDS |
| TGGAAGAAGAAAATGATGAT+GGG | 0.616216 | 7_4:-37418260 | Msa1152170:CDS |
| CCAAGACACTTGAGGCGTTG+CGG | 0.618422 | 7_4:-37417506 | Msa1152170:CDS |
| GGTTCCAACACAACAAGACA+TGG | 0.619501 | 7_4:-37418652 | Msa1152170:CDS |
| TGGGATGGTGAAGCAAAATG+GGG | 0.623459 | 7_4:-37416434 | Msa1152170:CDS |
| TGATGGGTTGAAAAGTGAGG+CGG | 0.624829 | 7_4:-37418349 | Msa1152170:CDS |
| GCAGCGTTTGGATAATGCAA+TGG | 0.628794 | 7_4:-37416792 | Msa1152170:intron |
| GTCATTTGATTAGATATGGG+CGG | 0.632926 | 7_4:-37418900 | Msa1152170:intron |
| CAATTTCACTGCGAATCCGA+AGG | 0.633824 | 7_4:+37414865 | None:intergenic |
| GAACATTGTCTGATGCGCAA+AGG | 0.634154 | 7_4:-37419556 | Msa1152170:CDS |
| GCTGAAGGTCCTTCAAGAAG+GGG | 0.635073 | 7_4:-37419252 | Msa1152170:CDS |
| AAGTACTTGGAGTTGTGGGA+TGG | 0.635913 | 7_4:-37416449 | Msa1152170:CDS |
| AAGGTTGATGATGAAGATGT+GGG | 0.641554 | 7_4:-37418234 | Msa1152170:CDS |
| AAGTTGGATGATGAAGATGT+TGG | 0.645218 | 7_4:-37418300 | Msa1152170:CDS |
| ATTATCCAAACGCTGCCTTG+AGG | 0.647660 | 7_4:+37416799 | None:intergenic |
| CGGAAAATATAACACACACA+AGG | 0.655010 | 7_4:+37419190 | None:intergenic |
| ACAGTGAAAGAAATGCCTCA+AGG | 0.655287 | 7_4:-37416814 | Msa1152170:CDS |
| AGATTGATGCGGATAATGAT+GGG | 0.662184 | 7_4:-37418365 | Msa1152170:CDS |
| TAATGATGGGTTGAAAAGTG+AGG | 0.663934 | 7_4:-37418352 | Msa1152170:CDS |
| TTAACCGATCAATAAATCCG+CGG | 0.665579 | 7_4:+37414776 | None:intergenic |
| AATTGGACCAAAGTGGATGG+AGG | 0.668982 | 7_4:-37418824 | Msa1152170:CDS |
| GCAAACCTAAAGCCAAACAA+AGG | 0.673782 | 7_4:+37419378 | None:intergenic |
| GTAGCATGGAAGTAGGAAGT+GGG | 0.674257 | 7_4:-37418416 | Msa1152170:CDS |
| TCGTTGGACCAAGACACTTG+AGG | 0.677045 | 7_4:-37417514 | Msa1152170:CDS |
| GAACATTTATCCCTAACCAG+TGG | 0.678694 | 7_4:-37418875 | Msa1152170:CDS |
| GCTCTTAGTACCTATAATTG+GGG | 0.679670 | 7_4:-37419113 | Msa1152170:CDS |
| ATATCCACAAGATATCGGAA+CGG | 0.702922 | 7_4:+37419515 | None:intergenic |
| CCAACACGTAACATGTCCAG+TGG | 0.705795 | 7_4:+37416876 | None:intergenic |
| GTAAACTCCAATGGACTGAG+CGG | 0.711805 | 7_4:-37417557 | Msa1152170:CDS |
| TCAAGTGTCTTGGTCCAACG+AGG | 0.711931 | 7_4:+37417516 | None:intergenic |
| AGATACTGCAAAGATACCCG+CGG | 0.714457 | 7_4:-37414793 | Msa1152170:CDS |
| TCTACCAACTTATTGGTACG+GGG | 0.719408 | 7_4:+37419587 | None:intergenic |
| GGGATGGTGAAGCAAAATGG+GGG | 0.720669 | 7_4:-37416433 | Msa1152170:CDS |
| AAAGTGTAGTAAGATTGATG+CGG | 0.726301 | 7_4:-37418376 | Msa1152170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAAAAAAAAGGTTAA+CGG | + | chr7_4:37416374-37416393 | None:intergenic | 10.0% |
| !! | TATTTAATCGTAAAATAAAT+TGG | + | chr7_4:37418091-37418110 | None:intergenic | 10.0% |
| !!! | TTTTCATTTAAAAAAAATTG+AGG | + | chr7_4:37418588-37418607 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTTAAAGTGTT+TGG | - | chr7_4:37419071-37419090 | Msa1152170:CDS | 10.0% |
| !! | TACTAAATACTAATATATTA+TGG | - | chr7_4:37419287-37419306 | Msa1152170:CDS | 10.0% |
| !! | ACTAAATACTAATATATTAT+GGG | - | chr7_4:37419288-37419307 | Msa1152170:CDS | 10.0% |
| !! | ACATAAATAAAAGTAAGTAA+TGG | + | chr7_4:37416423-37416442 | None:intergenic | 15.0% |
| !!! | AATTTTGTCAGATTATTTTT+CGG | - | chr7_4:37416521-37416540 | Msa1152170:intron | 15.0% |
| !!! | AACTCTTAAATAAATTGTTT+TGG | - | chr7_4:37417467-37417486 | Msa1152170:intron | 15.0% |
| !! | CTAAATACTAATATATTATG+GGG | - | chr7_4:37419289-37419308 | Msa1152170:CDS | 15.0% |
| !! | AAATACATATATAGATAAAG+GGG | + | chr7_4:37419586-37419605 | None:intergenic | 15.0% |
| !! | GAAATACATATATAGATAAA+GGG | + | chr7_4:37419587-37419606 | None:intergenic | 15.0% |
| !! | AGAAATACATATATAGATAA+AGG | + | chr7_4:37419588-37419607 | None:intergenic | 15.0% |
| !! | TTAATATAACTGTGTGATTT+CGG | + | chr7_4:37415062-37415081 | None:intergenic | 20.0% |
| !!! | ATTTGTCATTTGATTAGATA+TGG | - | chr7_4:37415325-37415344 | Msa1152170:intron | 20.0% |
| !!! | TTTGTCATTTGATTAGATAT+GGG | - | chr7_4:37415326-37415345 | Msa1152170:intron | 20.0% |
| !!! | TTTTATTTATGTATTGCCTT+AGG | - | chr7_4:37416431-37416450 | Msa1152170:CDS | 20.0% |
| !! | TTATAATTAATGTTAGGCAT+GGG | + | chr7_4:37416606-37416625 | None:intergenic | 20.0% |
| !! | ATTATAATTAATGTTAGGCA+TGG | + | chr7_4:37416607-37416626 | None:intergenic | 20.0% |
| !! | CTGCAATTATAATTAATGTT+AGG | + | chr7_4:37416612-37416631 | None:intergenic | 20.0% |
| !! | TTAATTATAATTGCAGTTTG+AGG | - | chr7_4:37416616-37416635 | Msa1152170:CDS | 20.0% |
| !! | TCATTGACATCAAATTTATT+AGG | + | chr7_4:37417235-37417254 | None:intergenic | 20.0% |
| !! | TTGATATATTACTTGTGTAT+AGG | - | chr7_4:37417695-37417714 | Msa1152170:intron | 20.0% |
| !! | TGATATATTACTTGTGTATA+GGG | - | chr7_4:37417696-37417715 | Msa1152170:intron | 20.0% |
| !! | AATAACTCACTAGAATATAT+GGG | - | chr7_4:37418231-37418250 | Msa1152170:CDS | 20.0% |
| !! | TTGTTTGAGGAAAATAAAAA+TGG | - | chr7_4:37418259-37418278 | Msa1152170:CDS | 20.0% |
| !! | TATTTGACAGGAATAAAAAT+GGG | + | chr7_4:37418417-37418436 | None:intergenic | 20.0% |
| !! | TTCAACAATCAATTTCATAT+AGG | + | chr7_4:37418513-37418532 | None:intergenic | 20.0% |
| !!! | CAAGAATTATTTTCTTTTGT+CGG | - | chr7_4:37418628-37418647 | Msa1152170:CDS | 20.0% |
| !!! | ATGATTTTATTTTCAAACGA+GGG | + | chr7_4:37419197-37419216 | None:intergenic | 20.0% |
| !! | TCGTTTGAAAATAAAATCAT+GGG | - | chr7_4:37419197-37419216 | Msa1152170:CDS | 20.0% |
| !! | TCTATATATGTATTTCTTTG+AGG | - | chr7_4:37419591-37419610 | Msa1152170:CDS | 20.0% |
| !! | TTCGATAACAAAACAAAAAA+AGG | + | chr7_4:37419632-37419651 | None:intergenic | 20.0% |
| !!! | TTTTTTTGTTTTGTTATCGA+AGG | - | chr7_4:37419631-37419650 | Msa1152170:five_prime_UTR | 20.0% |
| ! | GTTAATATCTACCAACTTAT+TGG | + | chr7_4:37414652-37414671 | None:intergenic | 25.0% |
| ! | AATGAATGGTACTTTATTGA+AGG | - | chr7_4:37414752-37414771 | Msa1152170:three_prime_UTR | 25.0% |
| ! | TATTGAAGGAATTATTGCAT+AGG | - | chr7_4:37414766-37414785 | Msa1152170:exon | 25.0% |
| ! | AATTGAAAATCTTAGTAGTG+CGG | - | chr7_4:37415160-37415179 | Msa1152170:intron | 25.0% |
| ! | AATATTCAATACCTGCAATA+CGG | + | chr7_4:37415243-37415262 | None:intergenic | 25.0% |
| !!! | TGCAGGTATTGAATATTAAA+TGG | - | chr7_4:37415246-37415265 | Msa1152170:intron | 25.0% |
| !!! | GCAGGTATTGAATATTAAAT+GGG | - | chr7_4:37415247-37415266 | Msa1152170:intron | 25.0% |
| ! | TTGCCTTTAGTATATTAACT+CGG | - | chr7_4:37415473-37415492 | Msa1152170:intron | 25.0% |
| ! | TTACCGAGTTAATATACTAA+AGG | + | chr7_4:37415479-37415498 | None:intergenic | 25.0% |
| ! | TAGTATATTAACTCGGTAAA+TGG | - | chr7_4:37415480-37415499 | Msa1152170:intron | 25.0% |
| ! | AGTATATTAACTCGGTAAAT+GGG | - | chr7_4:37415481-37415500 | Msa1152170:intron | 25.0% |
| ! | ACCTATTTAATGTGATTAGT+TGG | - | chr7_4:37415544-37415563 | Msa1152170:intron | 25.0% |
| ! | ACCAACTAATCACATTAAAT+AGG | + | chr7_4:37415548-37415567 | None:intergenic | 25.0% |
| ! | GAGGATATTAAAAGCAAATA+AGG | - | chr7_4:37415760-37415779 | Msa1152170:intron | 25.0% |
| ! | TTAAAAGCAAATAAGGTTGA+CGG | - | chr7_4:37415767-37415786 | Msa1152170:intron | 25.0% |
| !!! | TTTTTTTAGTGTGTTATGTG+AGG | - | chr7_4:37416269-37416288 | Msa1152170:intron | 25.0% |
| ! | ATACTCTAATGAAAGAAAAC+AGG | + | chr7_4:37416904-37416923 | None:intergenic | 25.0% |
| ! | ATATTTGAATTGACAGAACA+AGG | - | chr7_4:37416948-37416967 | Msa1152170:intron | 25.0% |
| ! | TCAAATATAGAGAATAATGC+TGG | - | chr7_4:37417023-37417042 | Msa1152170:intron | 25.0% |
| ! | AAACAAAACTCGCAAAATTA+GGG | + | chr7_4:37417193-37417212 | None:intergenic | 25.0% |
| ! | AAAACAAAACTCGCAAAATT+AGG | + | chr7_4:37417194-37417213 | None:intergenic | 25.0% |
| ! | ATTTACCAAAGCAACAAAAT+TGG | - | chr7_4:37417641-37417660 | Msa1152170:intron | 25.0% |
| !! | GCTTTCAGTTTTCAATATAT+TGG | + | chr7_4:37418022-37418041 | None:intergenic | 25.0% |
| ! | AATTAGAATTGTTAAGACTC+AGG | - | chr7_4:37418042-37418061 | Msa1152170:intron | 25.0% |
| ! | TGAATGTTGTATCTATTGTT+TGG | - | chr7_4:37418129-37418148 | Msa1152170:CDS | 25.0% |
| ! | GAATGTTGTATCTATTGTTT+GGG | - | chr7_4:37418130-37418149 | Msa1152170:CDS | 25.0% |
| ! | CCCTTATAATTCCAAAAATA+CGG | + | chr7_4:37418176-37418195 | None:intergenic | 25.0% |
| !!! | CCGTATTTTTGGAATTATAA+GGG | - | chr7_4:37418173-37418192 | Msa1152170:CDS | 25.0% |
| !!! | CGTATTTTTGGAATTATAAG+GGG | - | chr7_4:37418174-37418193 | Msa1152170:CDS | 25.0% |
| !!! | ATGTTATGTTAATTTGTTCC+CGG | - | chr7_4:37418207-37418226 | Msa1152170:CDS | 25.0% |
| ! | GAATAACTCACTAGAATATA+TGG | - | chr7_4:37418230-37418249 | Msa1152170:CDS | 25.0% |
| !!! | ACTGTCATTATTTTTTTCCT+GGG | + | chr7_4:37418368-37418387 | None:intergenic | 25.0% |
| !!! | AACTGTCATTATTTTTTTCC+TGG | + | chr7_4:37418369-37418388 | None:intergenic | 25.0% |
| ! | CTATTTGACAGGAATAAAAA+TGG | + | chr7_4:37418418-37418437 | None:intergenic | 25.0% |
| !! | CATTTTTATTCCTGTCAAAT+AGG | - | chr7_4:37418416-37418435 | Msa1152170:CDS | 25.0% |
| !! | ATTTTCACAGAAATTTACCT+GGG | + | chr7_4:37418458-37418477 | None:intergenic | 25.0% |
| ! | AACAATCAATTTCATATAGG+AGG | + | chr7_4:37418510-37418529 | None:intergenic | 25.0% |
| ! | CATGTGATATCAATATTTCT+TGG | - | chr7_4:37418538-37418557 | Msa1152170:CDS | 25.0% |
| !! | GATAATTTTCTTTGTTCCAT+TGG | - | chr7_4:37418652-37418671 | Msa1152170:CDS | 25.0% |
| !!! | TAATTCCTGGGAATTTTTTA+TGG | + | chr7_4:37418904-37418923 | None:intergenic | 25.0% |
| ! | TGTTCAATAGTATAATTCCT+GGG | + | chr7_4:37418916-37418935 | None:intergenic | 25.0% |
| ! | TTGTTCAATAGTATAATTCC+TGG | + | chr7_4:37418917-37418936 | None:intergenic | 25.0% |
| ! | ATTCCAACATTTATATTCCT+GGG | - | chr7_4:37418968-37418987 | Msa1152170:intron | 25.0% |
| ! | TAAAATTGAAACCCAAGAAT+AGG | + | chr7_4:37419056-37419075 | None:intergenic | 25.0% |
| !!! | CATGATTTTATTTTCAAACG+AGG | + | chr7_4:37419198-37419217 | None:intergenic | 25.0% |
| ! | CTCGTTTGAAAATAAAATCA+TGG | - | chr7_4:37419196-37419215 | Msa1152170:CDS | 25.0% |
| !!! | TATATAGATAAAGGGGTATT+AGG | + | chr7_4:37419579-37419598 | None:intergenic | 25.0% |
| ! | TTATCGAAGGTCATATATAA+AGG | - | chr7_4:37419644-37419663 | Msa1152170:five_prime_UTR | 25.0% |
| CAACGGTATTCATTCATTAA+TGG | + | chr7_4:37414592-37414611 | None:intergenic | 30.0% | |
| TATCTACCAACTTATTGGTA+CGG | + | chr7_4:37414647-37414666 | None:intergenic | 30.0% | |
| TCTTCATATCCACAAGATAT+CGG | + | chr7_4:37414722-37414741 | None:intergenic | 30.0% | |
| AAGACCTATATAGGAATGAA+TGG | - | chr7_4:37414738-37414757 | Msa1152170:three_prime_UTR | 30.0% | |
| AGTACCATTCATTCCTATAT+AGG | + | chr7_4:37414745-37414764 | None:intergenic | 30.0% | |
| ACAAAGGTCTAGATGTTTAA+AGG | + | chr7_4:37414838-37414857 | None:intergenic | 30.0% | |
| TAAACATCTAGACCTTTGTT+TGG | - | chr7_4:37414839-37414858 | Msa1152170:CDS | 30.0% | |
| ! | CTGTATCATTCTTTTGTTGA+TGG | + | chr7_4:37415196-37415215 | None:intergenic | 30.0% |
| GATACAGTTATACACATTTC+TGG | - | chr7_4:37415209-37415228 | Msa1152170:intron | 30.0% | |
| !!! | AAACCTTTTTTCAAATGCGA+AGG | - | chr7_4:37415443-37415462 | Msa1152170:intron | 30.0% |
| TAACCTTCGCATTTGAAAAA+AGG | + | chr7_4:37415449-37415468 | None:intergenic | 30.0% | |
| ! | TTAATGTGATTAGTTGGTTG+AGG | - | chr7_4:37415550-37415569 | Msa1152170:intron | 30.0% |
| AAGCTTGCACATCAAAAAAA+GGG | + | chr7_4:37415664-37415683 | None:intergenic | 30.0% | |
| TAAGCTTGCACATCAAAAAA+AGG | + | chr7_4:37415665-37415684 | None:intergenic | 30.0% | |
| ! | TTTTGATGTGCAAGCTTATA+TGG | - | chr7_4:37415667-37415686 | Msa1152170:intron | 30.0% |
| AAAGTGTAGTAAGATTGATG+CGG | - | chr7_4:37415853-37415872 | Msa1152170:intron | 30.0% | |
| GAAAAGCAGAAGAAAATGAT+GGG | - | chr7_4:37415903-37415922 | Msa1152170:intron | 30.0% | |
| TGGTGAAGAGGAAAAAAAAT+TGG | - | chr7_4:37415949-37415968 | Msa1152170:intron | 30.0% | |
| TTGGAAGAAGAAAATGATGA+TGG | - | chr7_4:37415968-37415987 | Msa1152170:intron | 30.0% | |
| TGGAAGAAGAAAATGATGAT+GGG | - | chr7_4:37415969-37415988 | Msa1152170:intron | 30.0% | |
| GGGTGAAGAAGAAAAAAAAA+TGG | - | chr7_4:37416015-37416034 | Msa1152170:intron | 30.0% | |
| ATGGAAGAAGATAAAGACAA+TGG | - | chr7_4:37416034-37416053 | Msa1152170:intron | 30.0% | |
| TGGAAGAAGATAAAGACAAT+GGG | - | chr7_4:37416035-37416054 | Msa1152170:intron | 30.0% | |
| TGGCTGAAAAGGAAAAAAAA+AGG | - | chr7_4:37416080-37416099 | Msa1152170:intron | 30.0% | |
| TTTATTCTGCACACATGAAA+AGG | - | chr7_4:37416138-37416157 | Msa1152170:intron | 30.0% | |
| !!! | AACTACATTTTTTCATGTCG+CGG | - | chr7_4:37416200-37416219 | Msa1152170:intron | 30.0% |
| CCAGCAATATTAATAACCTA+AGG | + | chr7_4:37416450-37416469 | None:intergenic | 30.0% | |
| CCTTAGGTTATTAATATTGC+TGG | - | chr7_4:37416447-37416466 | Msa1152170:CDS | 30.0% | |
| !! | TGTCAGATTATTTTTCGGTA+CGG | - | chr7_4:37416526-37416545 | Msa1152170:intron | 30.0% |
| !! | TGAGGTAGTTGATGATTTAA+AGG | - | chr7_4:37416634-37416653 | Msa1152170:CDS | 30.0% |
| AGTCATCATTATGATGTTGT+AGG | - | chr7_4:37416780-37416799 | Msa1152170:intron | 30.0% | |
| !!! | AGGAGTTTGCTGATTTATTT+TGG | - | chr7_4:37416968-37416987 | Msa1152170:intron | 30.0% |
| !!! | CATTGTGGTTTTGTCTATAT+GGG | - | chr7_4:37417082-37417101 | Msa1152170:intron | 30.0% |
| AACAAAACTCGCAAAATTAG+GGG | + | chr7_4:37417192-37417211 | None:intergenic | 30.0% | |
| ! | GTAGTGGAATTGATGAATAA+AGG | - | chr7_4:37417565-37417584 | Msa1152170:CDS | 30.0% |
| AATAAAGGAGCGAACAATAA+AGG | - | chr7_4:37417580-37417599 | Msa1152170:CDS | 30.0% | |
| GAACAATAAAGGAGATATGT+TGG | - | chr7_4:37417591-37417610 | Msa1152170:CDS | 30.0% | |
| AGATATGTTGGAATCTTCTT+TGG | - | chr7_4:37417603-37417622 | Msa1152170:intron | 30.0% | |
| !! | ACTAACCAATTTTGTTGCTT+TGG | + | chr7_4:37417649-37417668 | None:intergenic | 30.0% |
| ! | AAATTTTGCAGTCATGATTG+TGG | - | chr7_4:37417744-37417763 | Msa1152170:CDS | 30.0% |
| ! | AATTTTGCAGTCATGATTGT+GGG | - | chr7_4:37417745-37417764 | Msa1152170:CDS | 30.0% |
| GGTATATGTTCTTAAGTACT+TGG | - | chr7_4:37417767-37417786 | Msa1152170:CDS | 30.0% | |
| AAGCATTACCAATGAATAGT+CGG | + | chr7_4:37417835-37417854 | None:intergenic | 30.0% | |
| CAATTAATCATCATTGACAG+CGG | - | chr7_4:37417936-37417955 | Msa1152170:CDS | 30.0% | |
| GCAATTAGGCTGTATATTTA+GGG | + | chr7_4:37417990-37418009 | None:intergenic | 30.0% | |
| TGCAATTAGGCTGTATATTT+AGG | + | chr7_4:37417991-37418010 | None:intergenic | 30.0% | |
| !! | CTATTGTTTGGGTTTTTAAC+TGG | - | chr7_4:37418141-37418160 | Msa1152170:CDS | 30.0% |
| !!! | GCCGTATTTTTGGAATTATA+AGG | - | chr7_4:37418172-37418191 | Msa1152170:CDS | 30.0% |
| !! | TGTTATGTTAATTTGTTCCC+GGG | - | chr7_4:37418208-37418227 | Msa1152170:CDS | 30.0% |
| ATATTCTAGTGAGTTATTCC+CGG | + | chr7_4:37418229-37418248 | None:intergenic | 30.0% | |
| GAATTACATATGCCATTGTT+TGG | - | chr7_4:37418302-37418321 | Msa1152170:CDS | 30.0% | |
| GGAACAAAAAAAATATGCCT+AGG | - | chr7_4:37418331-37418350 | Msa1152170:CDS | 30.0% | |
| AATAAAAATGGGCAAAACGT+GGG | + | chr7_4:37418406-37418425 | None:intergenic | 30.0% | |
| TTTATTCCTGTCAAATAGGA+TGG | - | chr7_4:37418420-37418439 | Msa1152170:CDS | 30.0% | |
| TTATTCCTGTCAAATAGGAT+GGG | - | chr7_4:37418421-37418440 | Msa1152170:CDS | 30.0% | |
| ! | GATTTTCACAGAAATTTACC+TGG | + | chr7_4:37418459-37418478 | None:intergenic | 30.0% |
| ATAGAAGTCCAAACTCAATT+GGG | + | chr7_4:37418685-37418704 | None:intergenic | 30.0% | |
| !!! | GACTTCTATGCATTGATTTT+GGG | - | chr7_4:37418696-37418715 | Msa1152170:intron | 30.0% |
| !!! | CACTTTTTTCTACAATTTCC+TGG | - | chr7_4:37418938-37418957 | Msa1152170:intron | 30.0% |
| ! | AATGTTGGAATCTTATTTCC+AGG | + | chr7_4:37418959-37418978 | None:intergenic | 30.0% |
| GATTCCAACATTTATATTCC+TGG | - | chr7_4:37418967-37418986 | Msa1152170:intron | 30.0% | |
| TTTCCCAGGAATATAAATGT+TGG | + | chr7_4:37418974-37418993 | None:intergenic | 30.0% | |
| GGGTTACAAAATTAATACCT+GGG | + | chr7_4:37419003-37419022 | None:intergenic | 30.0% | |
| AGGGTTACAAAATTAATACC+TGG | + | chr7_4:37419004-37419023 | None:intergenic | 30.0% | |
| AATAGGATTCCCAACATTTA+GGG | + | chr7_4:37419039-37419058 | None:intergenic | 30.0% | |
| TATATTTCATTCCGATCTCA+CGG | - | chr7_4:37419156-37419175 | Msa1152170:CDS | 30.0% | |
| !! | TTTATTTTCAAACGAGGGTT+GGG | + | chr7_4:37419192-37419211 | None:intergenic | 30.0% |
| !!! | TTTTATTTTCAAACGAGGGT+TGG | + | chr7_4:37419193-37419212 | None:intergenic | 30.0% |
| TGTGTAAGTTATTTGTTTCC+AGG | - | chr7_4:37419221-37419240 | Msa1152170:CDS | 30.0% | |
| ACTGTGTATAAAACATTTCC+TGG | + | chr7_4:37419242-37419261 | None:intergenic | 30.0% | |
| TTATACACAGTAACACACAT+TGG | - | chr7_4:37419251-37419270 | Msa1152170:CDS | 30.0% | |
| TGTAAGTAAATGCAGTTAGT+TGG | + | chr7_4:37419335-37419354 | None:intergenic | 30.0% | |
| AACTAACTGCATTTACTTAC+AGG | - | chr7_4:37419334-37419353 | Msa1152170:CDS | 30.0% | |
| TGCAGTATCTAATACAAATC+TGG | + | chr7_4:37419426-37419445 | None:intergenic | 30.0% | |
| ! | GCGTTTTGTATAATATTCGT+TGG | - | chr7_4:37419526-37419545 | Msa1152170:CDS | 30.0% |
| TAATATTCGTTGGTGTATCA+TGG | - | chr7_4:37419536-37419555 | Msa1152170:CDS | 30.0% | |
| !! | ATAAAGGGGTATTAGGATAA+AGG | + | chr7_4:37419572-37419591 | None:intergenic | 30.0% |
| ATCTACCAACTTATTGGTAC+GGG | + | chr7_4:37414646-37414665 | None:intergenic | 35.0% | |
| ATATCCACAAGATATCGGAA+CGG | + | chr7_4:37414717-37414736 | None:intergenic | 35.0% | |
| GTGGATATGAAGACCTATAT+AGG | - | chr7_4:37414729-37414748 | Msa1152170:three_prime_UTR | 35.0% | |
| TGAAGGAATTATTGCATAGG+TGG | - | chr7_4:37414769-37414788 | Msa1152170:exon | 35.0% | |
| GAAGGAATTATTGCATAGGT+GGG | - | chr7_4:37414770-37414789 | Msa1152170:exon | 35.0% | |
| ! | AGTAGCTTAGGATTTAGAGT+AGG | - | chr7_4:37414798-37414817 | Msa1152170:CDS | 35.0% |
| !! | TATTGTAGGAGAGTGTTTAC+CGG | - | chr7_4:37414875-37414894 | Msa1152170:CDS | 35.0% |
| TTTACCGGAAACTAGTGATA+GGG | - | chr7_4:37414890-37414909 | Msa1152170:intron | 35.0% | |
| TAGTGTACATTCTAAGCTGA+AGG | - | chr7_4:37414962-37414981 | Msa1152170:intron | 35.0% | |
| CGGAAAATATAACACACACA+AGG | + | chr7_4:37415042-37415061 | None:intergenic | 35.0% | |
| ACGCTCTTAGTACCTATAAT+TGG | - | chr7_4:37415114-37415133 | Msa1152170:intron | 35.0% | |
| CGCTCTTAGTACCTATAATT+GGG | - | chr7_4:37415115-37415134 | Msa1152170:intron | 35.0% | |
| GCTCTTAGTACCTATAATTG+GGG | - | chr7_4:37415116-37415135 | Msa1152170:intron | 35.0% | |
| GTCATTTGATTAGATATGGG+CGG | - | chr7_4:37415329-37415348 | Msa1152170:intron | 35.0% | |
| ! | GTTTTCCACGCATTAACAAT+TGG | - | chr7_4:37415388-37415407 | Msa1152170:intron | 35.0% |
| CATTAACAATTGGACCAAAG+TGG | - | chr7_4:37415398-37415417 | Msa1152170:intron | 35.0% | |
| !! | TTTTCCATGTCTTGTTGTGT+TGG | + | chr7_4:37415584-37415603 | None:intergenic | 35.0% |
| ACCAACTTGAGAATGGTTAA+CGG | + | chr7_4:37415624-37415643 | None:intergenic | 35.0% | |
| !! | AACCATTCTCAAGTTGGTAT+TGG | - | chr7_4:37415626-37415645 | Msa1152170:intron | 35.0% |
| CTTATATGGCTGAACATCAA+AGG | - | chr7_4:37415681-37415700 | Msa1152170:intron | 35.0% | |
| ! | AACACAAAGATTTGCTTTCC+CGG | - | chr7_4:37415714-37415733 | Msa1152170:intron | 35.0% |
| ATATCCTCATATCATCCTCA+AGG | + | chr7_4:37415748-37415767 | None:intergenic | 35.0% | |
| AAGATTGATGCGGATAATGA+TGG | - | chr7_4:37415863-37415882 | Msa1152170:intron | 35.0% | |
| AGATTGATGCGGATAATGAT+GGG | - | chr7_4:37415864-37415883 | Msa1152170:intron | 35.0% | |
| !! | TAATGATGGGTTGAAAAGTG+AGG | - | chr7_4:37415877-37415896 | Msa1152170:intron | 35.0% |
| GGAAAAGCAGAAGAAAATGA+TGG | - | chr7_4:37415902-37415921 | Msa1152170:intron | 35.0% | |
| ! | AGAAAATGATGGGATGAAGT+TGG | - | chr7_4:37415913-37415932 | Msa1152170:intron | 35.0% |
| AAGTTGGATGATGAAGATGT+TGG | - | chr7_4:37415929-37415948 | Msa1152170:intron | 35.0% | |
| !! | AGAAAATGATGATGGGATGA+AGG | - | chr7_4:37415976-37415995 | Msa1152170:intron | 35.0% |
| !! | AAGGTTGATGATGAAGATGT+GGG | - | chr7_4:37415995-37416014 | Msa1152170:intron | 35.0% |
| AGAAGATAAAGACAATGGGA+TGG | - | chr7_4:37416039-37416058 | Msa1152170:intron | 35.0% | |
| ! | TGATGATGATATGGCTGAAA+AGG | - | chr7_4:37416069-37416088 | Msa1152170:intron | 35.0% |
| !!! | ACTACATTTTTTCATGTCGC+GGG | - | chr7_4:37416201-37416220 | Msa1152170:intron | 35.0% |
| AGGTTATTAATATTGCTGGC+AGG | - | chr7_4:37416451-37416470 | Msa1152170:CDS | 35.0% | |
| CATGATGAAGTTCGAAAACA+TGG | - | chr7_4:37416483-37416502 | Msa1152170:intron | 35.0% | |
| ATAAAGTCAAACAACCGTGA+TGG | - | chr7_4:37416562-37416581 | Msa1152170:intron | 35.0% | |
| TAAAGTCAAACAACCGTGAT+GGG | - | chr7_4:37416563-37416582 | Msa1152170:intron | 35.0% | |
| TAAAGGTTGAATACCCATCA+CGG | + | chr7_4:37416579-37416598 | None:intergenic | 35.0% | |
| TGTTAGGCATGGGATAATAA+AGG | + | chr7_4:37416596-37416615 | None:intergenic | 35.0% | |
| TCAAGATATATATGCCTCGT+TGG | - | chr7_4:37416699-37416718 | Msa1152170:intron | 35.0% | |
| AGGTGTAGATGATTTCTGAT+TGG | - | chr7_4:37416800-37416819 | Msa1152170:CDS | 35.0% | |
| ! | TTGTCTAGAATGTTGATGAG+TGG | - | chr7_4:37416829-37416848 | Msa1152170:CDS | 35.0% |
| ! | TGTCTAGAATGTTGATGAGT+GGG | - | chr7_4:37416830-37416849 | Msa1152170:CDS | 35.0% |
| CTCTACCTAAAATTCCCTTT+AGG | - | chr7_4:37417047-37417066 | Msa1152170:intron | 35.0% | |
| !!! | GCATTGTGGTTTTGTCTATA+TGG | - | chr7_4:37417081-37417100 | Msa1152170:intron | 35.0% |
| GGGTTTGTGTTGTATTAGTT+CGG | - | chr7_4:37417102-37417121 | Msa1152170:intron | 35.0% | |
| TTTGTGTTGTATTAGTTCGG+TGG | - | chr7_4:37417105-37417124 | Msa1152170:intron | 35.0% | |
| TTGTGTTGTATTAGTTCGGT+GGG | - | chr7_4:37417106-37417125 | Msa1152170:intron | 35.0% | |
| ! | GTTTTGTGTGGTTTTTTGTG+CGG | - | chr7_4:37417135-37417154 | Msa1152170:intron | 35.0% |
| ! | TTTTGTGTGGTTTTTTGTGC+GGG | - | chr7_4:37417136-37417155 | Msa1152170:intron | 35.0% |
| GCAAAATTAGGGGTTACAAT+AGG | + | chr7_4:37417182-37417201 | None:intergenic | 35.0% | |
| !!! | CGAATTTGTTTTATGCAACG+TGG | - | chr7_4:37417277-37417296 | Msa1152170:intron | 35.0% |
| ! | CATACATTGTCCTTTTCCTA+TGG | + | chr7_4:37417380-37417399 | None:intergenic | 35.0% |
| ! | TTACAGAAAGTCCGTTTTGA+AGG | - | chr7_4:37417541-37417560 | Msa1152170:CDS | 35.0% |
| !! | TACAGAAAGTCCGTTTTGAA+GGG | - | chr7_4:37417542-37417561 | Msa1152170:CDS | 35.0% |
| TATGTTGGAATCTTCTTTGG+AGG | - | chr7_4:37417606-37417625 | Msa1152170:intron | 35.0% | |
| ! | ATTTTGCAGTCATGATTGTG+GGG | - | chr7_4:37417746-37417765 | Msa1152170:CDS | 35.0% |
| TTCTTAAGTACTTGGAGTTG+TGG | - | chr7_4:37417775-37417794 | Msa1152170:CDS | 35.0% | |
| TCTTAAGTACTTGGAGTTGT+GGG | - | chr7_4:37417776-37417795 | Msa1152170:CDS | 35.0% | |
| AGCATTACCAATGAATAGTC+GGG | + | chr7_4:37417834-37417853 | None:intergenic | 35.0% | |
| ATTGGATGTCTACTGCAATT+AGG | + | chr7_4:37418004-37418023 | None:intergenic | 35.0% | |
| TAGAATTGTTAAGACTCAGG+TGG | - | chr7_4:37418045-37418064 | Msa1152170:intron | 35.0% | |
| !! | TTGTTTGGGTTTTTAACTGG+AGG | - | chr7_4:37418144-37418163 | Msa1152170:CDS | 35.0% |
| TATTCTAGTGAGTTATTCCC+GGG | + | chr7_4:37418228-37418247 | None:intergenic | 35.0% | |
| GGAAAATAAAAATGGTTCCC+AGG | - | chr7_4:37418267-37418286 | Msa1152170:CDS | 35.0% | |
| AATTCCAACCTTAGATTCCT+GGG | + | chr7_4:37418287-37418306 | None:intergenic | 35.0% | |
| TAATTCCAACCTTAGATTCC+TGG | + | chr7_4:37418288-37418307 | None:intergenic | 35.0% | |
| ATATGCCATTGTTTGGTAGA+TGG | - | chr7_4:37418309-37418328 | Msa1152170:CDS | 35.0% | |
| TATGCCATTGTTTGGTAGAT+GGG | - | chr7_4:37418310-37418329 | Msa1152170:CDS | 35.0% | |
| CCTGGGTATAATTTATTCCT+AGG | + | chr7_4:37418351-37418370 | None:intergenic | 35.0% | |
| CCTAGGAATAAATTATACCC+AGG | - | chr7_4:37418348-37418367 | Msa1152170:CDS | 35.0% | |
| GAATAAAAATGGGCAAAACG+TGG | + | chr7_4:37418407-37418426 | None:intergenic | 35.0% | |
| !! | AGGTGATAAGCATTGGTTAA+GGG | + | chr7_4:37418490-37418509 | None:intergenic | 35.0% |
| ATATAGGAGGTGATAAGCAT+TGG | + | chr7_4:37418497-37418516 | None:intergenic | 35.0% | |
| TCAATTGGGGAAAATTCCAA+TGG | + | chr7_4:37418671-37418690 | None:intergenic | 35.0% | |
| ! | GAATTTTCCCCAATTGAGTT+TGG | - | chr7_4:37418674-37418693 | Msa1152170:intron | 35.0% |
| TAGAAGTCCAAACTCAATTG+GGG | + | chr7_4:37418684-37418703 | None:intergenic | 35.0% | |
| CATAGAAGTCCAAACTCAAT+TGG | + | chr7_4:37418686-37418705 | None:intergenic | 35.0% | |
| !!! | GGACTTCTATGCATTGATTT+TGG | - | chr7_4:37418695-37418714 | Msa1152170:intron | 35.0% |
| !!! | ATGCATTGATTTTGGGATGA+TGG | - | chr7_4:37418703-37418722 | Msa1152170:intron | 35.0% |
| TTACACATCCCTTTCCATAT+TGG | + | chr7_4:37418729-37418748 | None:intergenic | 35.0% | |
| GTAATACAAGAAAGAGAACC+TGG | - | chr7_4:37418745-37418764 | Msa1152170:intron | 35.0% | |
| ACAGGATTTAGAAATGTCGA+TGG | - | chr7_4:37418841-37418860 | Msa1152170:CDS | 35.0% | |
| !! | AAATGTCGATGGTATTGACA+GGG | - | chr7_4:37418852-37418871 | Msa1152170:CDS | 35.0% |
| TCATGCCATAAAAAATTCCC+AGG | - | chr7_4:37418896-37418915 | Msa1152170:intron | 35.0% | |
| GAATAGGATTCCCAACATTT+AGG | + | chr7_4:37419040-37419059 | None:intergenic | 35.0% | |
| AATGTTGGGAATCCTATTCT+TGG | - | chr7_4:37419041-37419060 | Msa1152170:CDS | 35.0% | |
| ATGTTGGGAATCCTATTCTT+GGG | - | chr7_4:37419042-37419061 | Msa1152170:CDS | 35.0% | |
| GTTAACATGTGTAACATTCC+CGG | - | chr7_4:37419093-37419112 | Msa1152170:CDS | 35.0% | |
| TTAACATGTGTAACATTCCC+GGG | - | chr7_4:37419094-37419113 | Msa1152170:CDS | 35.0% | |
| ATATTTCATTCCGATCTCAC+GGG | - | chr7_4:37419157-37419176 | Msa1152170:CDS | 35.0% | |
| ! | TTATTTTCAAACGAGGGTTG+GGG | + | chr7_4:37419191-37419210 | None:intergenic | 35.0% |
| TAACTGCATTTACTTACAGG+AGG | - | chr7_4:37419337-37419356 | Msa1152170:CDS | 35.0% | |
| TTAACCGATCAATAAATCCG+CGG | + | chr7_4:37419456-37419475 | None:intergenic | 35.0% | |
| TTTGTCTAACTTGATTGTGC+TGG | - | chr7_4:37419483-37419502 | Msa1152170:CDS | 35.0% | |
| ATCTGTGGCTGCAAATTCAA+CGG | + | chr7_4:37414609-37414628 | None:intergenic | 40.0% | |
| GGCATTTGAGTCTTTATCTG+TGG | + | chr7_4:37414624-37414643 | None:intergenic | 40.0% | |
| TCTACCAACTTATTGGTACG+GGG | + | chr7_4:37414645-37414664 | None:intergenic | 40.0% | |
| TTTGCGCATCAGACAATGTT+CGG | + | chr7_4:37414674-37414693 | None:intergenic | 40.0% | |
| ! | TAGGATTTAGAGTAGGCGTT+AGG | - | chr7_4:37414805-37414824 | Msa1152170:CDS | 40.0% |
| !! | CTAGACCTTTGTTTGGCTTT+AGG | - | chr7_4:37414846-37414865 | Msa1152170:CDS | 40.0% |
| GCAAACCTAAAGCCAAACAA+AGG | + | chr7_4:37414854-37414873 | None:intergenic | 40.0% | |
| ! | GCTTTAGGTTTGCCTATTGT+AGG | - | chr7_4:37414861-37414880 | Msa1152170:CDS | 40.0% |
| GGTAAACACTCTCCTACAAT+AGG | + | chr7_4:37414876-37414895 | None:intergenic | 40.0% | |
| GTTTACCGGAAACTAGTGAT+AGG | - | chr7_4:37414889-37414908 | Msa1152170:intron | 40.0% | |
| ! | CTAACCCTATCACTAGTTTC+CGG | + | chr7_4:37414897-37414916 | None:intergenic | 40.0% |
| AACAGCAACACCCCAATTAT+AGG | + | chr7_4:37415129-37415148 | None:intergenic | 40.0% | |
| GAACATTTATCCCTAACCAG+TGG | - | chr7_4:37415354-37415373 | Msa1152170:intron | 40.0% | |
| ! | CTTAATTGGACCACTGGTTA+GGG | + | chr7_4:37415367-37415386 | None:intergenic | 40.0% |
| AAAACGCTTAATTGGACCAC+TGG | + | chr7_4:37415373-37415392 | None:intergenic | 40.0% | |
| ATGCGTGGAAAACGCTTAAT+TGG | + | chr7_4:37415381-37415400 | None:intergenic | 40.0% | |
| TTGGTCCAATTGTTAATGCG+TGG | + | chr7_4:37415396-37415415 | None:intergenic | 40.0% | |
| AACAATTGGACCAAAGTGGA+TGG | - | chr7_4:37415402-37415421 | Msa1152170:intron | 40.0% | |
| ! | TGATTAGTTGGTTGAGGACT+TGG | - | chr7_4:37415556-37415575 | Msa1152170:intron | 40.0% |
| CTCCAATACCAACTTGAGAA+TGG | + | chr7_4:37415631-37415650 | None:intergenic | 40.0% | |
| TATGGCTGAACATCAAAGGT+TGG | - | chr7_4:37415685-37415704 | Msa1152170:intron | 40.0% | |
| ! | ACACAAAGATTTGCTTTCCC+GGG | - | chr7_4:37415715-37415734 | Msa1152170:intron | 40.0% |
| CAATCCTTGAGGATGATATG+AGG | - | chr7_4:37415741-37415760 | Msa1152170:intron | 40.0% | |
| AAGCAAATAAGGTTGACGGT+AGG | - | chr7_4:37415771-37415790 | Msa1152170:intron | 40.0% | |
| AGCAAATAAGGTTGACGGTA+GGG | - | chr7_4:37415772-37415791 | Msa1152170:intron | 40.0% | |
| ! | TGATGAAGATGTTGGTGAAG+AGG | - | chr7_4:37415937-37415956 | Msa1152170:intron | 40.0% |
| !! | GAAGGTTGATGATGAAGATG+TGG | - | chr7_4:37415994-37416013 | Msa1152170:intron | 40.0% |
| TAAAGACAATGGGATGGAGT+TGG | - | chr7_4:37416045-37416064 | Msa1152170:intron | 40.0% | |
| ! | GGAGTTGGATGATGATGATA+TGG | - | chr7_4:37416060-37416079 | Msa1152170:intron | 40.0% |
| ! | GGAGTTTTTCCAATGCATGA+AGG | - | chr7_4:37416314-37416333 | Msa1152170:intron | 40.0% |
| ! | GATTTAAAGGCACATCCTGA+AGG | - | chr7_4:37416647-37416666 | Msa1152170:CDS | 40.0% |
| AAGAAAACAGGCAGTGATGA+AGG | + | chr7_4:37416892-37416911 | None:intergenic | 40.0% | |
| ! | CACTGCCTAAAGGGAATTTT+AGG | + | chr7_4:37417055-37417074 | None:intergenic | 40.0% |
| CTAAAATTCCCTTTAGGCAG+TGG | - | chr7_4:37417053-37417072 | Msa1152170:intron | 40.0% | |
| ! | TGTGTTGTATTAGTTCGGTG+GGG | - | chr7_4:37417107-37417126 | Msa1152170:intron | 40.0% |
| !!! | TTTGTGTGGTTTTTTGTGCG+GGG | - | chr7_4:37417137-37417156 | Msa1152170:intron | 40.0% |
| GAAAAGGACAATGTATGTGC+TGG | - | chr7_4:37417383-37417402 | Msa1152170:intron | 40.0% | |
| ACAGTGAAAGAAATGCCTCA+AGG | - | chr7_4:37417415-37417434 | Msa1152170:intron | 40.0% | |
| !!! | ACAGAAAGTCCGTTTTGAAG+GGG | - | chr7_4:37417543-37417562 | Msa1152170:CDS | 40.0% |
| ATTCCACTACCCCTTCAAAA+CGG | + | chr7_4:37417555-37417574 | None:intergenic | 40.0% | |
| ! | ATCTTCTTTGGAGGTTGTAG+TGG | - | chr7_4:37417615-37417634 | Msa1152170:intron | 40.0% |
| GCTGTATATTTAGGGAATGC+GGG | + | chr7_4:37417982-37418001 | None:intergenic | 40.0% | |
| GGCTGTATATTTAGGGAATG+CGG | + | chr7_4:37417983-37418002 | None:intergenic | 40.0% | |
| TATATGGGTGCGTTTGTTTG+AGG | - | chr7_4:37418246-37418265 | Msa1152170:CDS | 40.0% | |
| AAATGGTTCCCAGGAATCTA+AGG | - | chr7_4:37418276-37418295 | Msa1152170:CDS | 40.0% | |
| TGTTCCCATCTACCAAACAA+TGG | + | chr7_4:37418317-37418336 | None:intergenic | 40.0% | |
| ACTTTCCCATCCTATTTGAC+AGG | + | chr7_4:37418429-37418448 | None:intergenic | 40.0% | |
| !! | GAGGTGATAAGCATTGGTTA+AGG | + | chr7_4:37418491-37418510 | None:intergenic | 40.0% |
| !!! | TTTTGGGATGATGGCCAATA+TGG | - | chr7_4:37418712-37418731 | Msa1152170:intron | 40.0% |
| ! | GATGATGGCCAATATGGAAA+GGG | - | chr7_4:37418718-37418737 | Msa1152170:intron | 40.0% |
| ! | AATCCTTCCTGAGTTCTAGT+CGG | + | chr7_4:37418801-37418820 | None:intergenic | 40.0% |
| CTCAGGAAGGATTAGAGTTT+AGG | - | chr7_4:37418808-37418827 | Msa1152170:CDS | 40.0% | |
| AGTTTAGGCTCTTCATCAAC+AGG | - | chr7_4:37418823-37418842 | Msa1152170:CDS | 40.0% | |
| !! | GAAATGTCGATGGTATTGAC+AGG | - | chr7_4:37418851-37418870 | Msa1152170:CDS | 40.0% |
| !! | AATGTCGATGGTATTGACAG+GGG | - | chr7_4:37418853-37418872 | Msa1152170:CDS | 40.0% |
| ! | TTTAGGGTGCGTTTGTTTGA+GGG | + | chr7_4:37419023-37419042 | None:intergenic | 40.0% |
| ! | ATTTAGGGTGCGTTTGTTTG+AGG | + | chr7_4:37419024-37419043 | None:intergenic | 40.0% |
| AACAAACGCACCCTAAATGT+TGG | - | chr7_4:37419026-37419045 | Msa1152170:CDS | 40.0% | |
| ACAAACGCACCCTAAATGTT+GGG | - | chr7_4:37419027-37419046 | Msa1152170:CDS | 40.0% | |
| GGAAAAAATTCCCGTGAGAT+CGG | + | chr7_4:37419170-37419189 | None:intergenic | 40.0% | |
| ACTTACAGGAGGATATCCTT+CGG | - | chr7_4:37419348-37419367 | Msa1152170:CDS | 40.0% | |
| CAGTGAAATTGTTTGTCGTC+TGG | - | chr7_4:37419376-37419395 | Msa1152170:CDS | 40.0% | |
| ATACCCGCGGATTTATTGAT+CGG | - | chr7_4:37419449-37419468 | Msa1152170:CDS | 40.0% | |
| TAACCGATCAATAAATCCGC+GGG | + | chr7_4:37419455-37419474 | None:intergenic | 40.0% | |
| AATGCCCCGTACCAATAAGT+TGG | - | chr7_4:37414638-37414657 | Msa1152170:three_prime_UTR | 45.0% | |
| GAACATTGTCTGATGCGCAA+AGG | - | chr7_4:37414673-37414692 | Msa1152170:three_prime_UTR | 45.0% | |
| AACTCCGTTCCGATATCTTG+TGG | - | chr7_4:37414710-37414729 | Msa1152170:three_prime_UTR | 45.0% | |
| AAGCTGAAGGTCCTTCAAGA+AGG | - | chr7_4:37414975-37414994 | Msa1152170:intron | 45.0% | |
| AGCTGAAGGTCCTTCAAGAA+GGG | - | chr7_4:37414976-37414995 | Msa1152170:intron | 45.0% | |
| TCAATACCTGCAATACGGCT+GGG | + | chr7_4:37415238-37415257 | None:intergenic | 45.0% | |
| TTCAATACCTGCAATACGGC+TGG | + | chr7_4:37415239-37415258 | None:intergenic | 45.0% | |
| ! | GCTTAATTGGACCACTGGTT+AGG | + | chr7_4:37415368-37415387 | None:intergenic | 45.0% |
| AATTGGACCAAAGTGGATGG+AGG | - | chr7_4:37415405-37415424 | Msa1152170:intron | 45.0% | |
| AACATGACCTCCATCCACTT+TGG | + | chr7_4:37415415-37415434 | None:intergenic | 45.0% | |
| GGTTCCAACACAACAAGACA+TGG | - | chr7_4:37415577-37415596 | Msa1152170:intron | 45.0% | |
| GCCGTTAACCATTCTCAAGT+TGG | - | chr7_4:37415620-37415639 | Msa1152170:intron | 45.0% | |
| ATCCTCAAGGATTGAAACCC+GGG | + | chr7_4:37415735-37415754 | None:intergenic | 45.0% | |
| CATCCTCAAGGATTGAAACC+CGG | + | chr7_4:37415736-37415755 | None:intergenic | 45.0% | |
| TATTCCGATGCCAAGTAGCA+TGG | - | chr7_4:37415799-37415818 | Msa1152170:intron | 45.0% | |
| ! | ACTTCCATGCTACTTGGCAT+CGG | + | chr7_4:37415806-37415825 | None:intergenic | 45.0% |
| ATGCCAAGTAGCATGGAAGT+AGG | - | chr7_4:37415806-37415825 | Msa1152170:intron | 45.0% | |
| CTTCCTACTTCCATGCTACT+TGG | + | chr7_4:37415812-37415831 | None:intergenic | 45.0% | |
| AGTAGCATGGAAGTAGGAAG+TGG | - | chr7_4:37415812-37415831 | Msa1152170:intron | 45.0% | |
| GTAGCATGGAAGTAGGAAGT+GGG | - | chr7_4:37415813-37415832 | Msa1152170:intron | 45.0% | |
| GGAAGTGGGTCAAAACATGT+AGG | - | chr7_4:37415827-37415846 | Msa1152170:intron | 45.0% | |
| !! | TGATGGGTTGAAAAGTGAGG+CGG | - | chr7_4:37415880-37415899 | Msa1152170:intron | 45.0% |
| CATGCATTGGAAAAACTCCC+CGG | + | chr7_4:37416313-37416332 | None:intergenic | 45.0% | |
| ! | TTTTCCAATGCATGAAGGCG+AGG | - | chr7_4:37416319-37416338 | Msa1152170:intron | 45.0% |
| CATTGGAGTTTACGTCCTTC+AGG | + | chr7_4:37416665-37416684 | None:intergenic | 45.0% | |
| CTGAAGGACGTAAACTCCAA+TGG | - | chr7_4:37416663-37416682 | Msa1152170:CDS | 45.0% | |
| !! | GTAAACTCCAATGGACTGAG+CGG | - | chr7_4:37416672-37416691 | Msa1152170:CDS | 45.0% |
| TGAATTTCCGCTCAGTCCAT+TGG | + | chr7_4:37416682-37416701 | None:intergenic | 45.0% | |
| ! | TTCCCTTTAGGCAGTGGATT+TGG | - | chr7_4:37417059-37417078 | Msa1152170:intron | 45.0% |
| TGCCAAATCCACTGCCTAAA+GGG | + | chr7_4:37417064-37417083 | None:intergenic | 45.0% | |
| ATGCCAAATCCACTGCCTAA+AGG | + | chr7_4:37417065-37417084 | None:intergenic | 45.0% | |
| ! | GTGTTGTATTAGTTCGGTGG+GGG | - | chr7_4:37417108-37417127 | Msa1152170:intron | 45.0% |
| ! | TGTTGTATTAGTTCGGTGGG+GGG | - | chr7_4:37417109-37417128 | Msa1152170:intron | 45.0% |
| CATGTTACGTGTTGGACCAT+AGG | - | chr7_4:37417361-37417380 | Msa1152170:intron | 45.0% | |
| ACGTGTTGGACCATAGGAAA+AGG | - | chr7_4:37417367-37417386 | Msa1152170:intron | 45.0% | |
| ATTATCCAAACGCTGCCTTG+AGG | + | chr7_4:37417433-37417452 | None:intergenic | 45.0% | |
| GCAGCGTTTGGATAATGCAA+TGG | - | chr7_4:37417437-37417456 | Msa1152170:intron | 45.0% | |
| ! | TTCTTTGGAGGTTGTAGTGG+TGG | - | chr7_4:37417618-37417637 | Msa1152170:intron | 45.0% |
| AAGTACTTGGAGTTGTGGGA+TGG | - | chr7_4:37417780-37417799 | Msa1152170:intron | 45.0% | |
| TGTGGGATGGTGAAGCAAAA+TGG | - | chr7_4:37417793-37417812 | Msa1152170:intron | 45.0% | |
| GTGGGATGGTGAAGCAAAAT+GGG | - | chr7_4:37417794-37417813 | Msa1152170:intron | 45.0% | |
| TGGGATGGTGAAGCAAAATG+GGG | - | chr7_4:37417795-37417814 | Msa1152170:intron | 45.0% | |
| GAGTATGCCCGACTATTCAT+TGG | - | chr7_4:37417824-37417843 | Msa1152170:intron | 45.0% | |
| GTATATTTAGGGAATGCGGG+AGG | + | chr7_4:37417979-37417998 | None:intergenic | 45.0% | |
| GATGGGAAAGTTTGATTCCC+AGG | - | chr7_4:37418438-37418457 | Msa1152170:CDS | 45.0% | |
| !! | GCATTGGTTAAGGGCAGAAT+TGG | + | chr7_4:37418481-37418500 | None:intergenic | 45.0% |
| ! | GGATGATGGCCAATATGGAA+AGG | - | chr7_4:37418717-37418736 | Msa1152170:intron | 45.0% |
| ! | AGAACCTGGTTTGTCTAGCA+GGG | - | chr7_4:37418759-37418778 | Msa1152170:intron | 45.0% |
| TAATCCCTGCTAGACAAACC+AGG | + | chr7_4:37418766-37418785 | None:intergenic | 45.0% | |
| ACACTCCTACAACTAAGTCC+CGG | + | chr7_4:37419115-37419134 | None:intergenic | 45.0% | |
| CAATTTCACTGCGAATCCGA+AGG | + | chr7_4:37419367-37419386 | None:intergenic | 45.0% | |
| AGATACTGCAAAGATACCCG+CGG | - | chr7_4:37419436-37419455 | Msa1152170:CDS | 45.0% | |
| !! | AATCTAAATTAAAAAAAAAA+AGG | + | chr7_4:37416381-37416400 | None:intergenic | 5.0% |
| !!! | TAAATTTTATCATTAAAATT+AGG | - | chr7_4:37417305-37417324 | Msa1152170:intron | 5.0% |
| !! | AAATTTAAAAATTTCAAATT+AGG | + | chr7_4:37417730-37417749 | None:intergenic | 5.0% |
| AGGTGGGATGCAAGTAGCTT+AGG | - | chr7_4:37414786-37414805 | Msa1152170:CDS | 50.0% | |
| TAGAGTAGGCGTTAGGACTG+TGG | - | chr7_4:37414812-37414831 | Msa1152170:CDS | 50.0% | |
| GCTGAAGGTCCTTCAAGAAG+GGG | - | chr7_4:37414977-37414996 | Msa1152170:intron | 50.0% | |
| CTACGTTGTCCCCTTCTTGA+AGG | + | chr7_4:37414989-37415008 | None:intergenic | 50.0% | |
| TTCCCGGGTTTCAATCCTTG+AGG | - | chr7_4:37415730-37415749 | Msa1152170:intron | 50.0% | |
| !! | GATGGGTTGAAAAGTGAGGC+GGG | - | chr7_4:37415881-37415900 | Msa1152170:intron | 50.0% |
| GTAGATGAGTTGCGTGTTGC+CGG | - | chr7_4:37416291-37416310 | Msa1152170:intron | 50.0% | |
| TAGATGAGTTGCGTGTTGCC+GGG | - | chr7_4:37416292-37416311 | Msa1152170:intron | 50.0% | |
| ACTTCCTCGCCTTCATGCAT+TGG | + | chr7_4:37416326-37416345 | None:intergenic | 50.0% | |
| AATGCATGAAGGCGAGGAAG+TGG | - | chr7_4:37416325-37416344 | Msa1152170:intron | 50.0% | |
| ATGCATGAAGGCGAGGAAGT+GGG | - | chr7_4:37416326-37416345 | Msa1152170:intron | 50.0% | |
| TCAAGTGTCTTGGTCCAACG+AGG | + | chr7_4:37416716-37416735 | None:intergenic | 50.0% | |
| TCGTTGGACCAAGACACTTG+AGG | - | chr7_4:37416715-37416734 | Msa1152170:intron | 50.0% | |
| ! | AGGCAGTGGATTTGGCATTG+TGG | - | chr7_4:37417067-37417086 | Msa1152170:intron | 50.0% |
| GCGGGGTTTACGCTTATGTT+TGG | - | chr7_4:37417154-37417173 | Msa1152170:intron | 50.0% | |
| TATTAGGCAGAGTCGTCGCA+AGG | + | chr7_4:37417219-37417238 | None:intergenic | 50.0% | |
| TGTCCAGTGGTCTTCGAACT+GGG | + | chr7_4:37417343-37417362 | None:intergenic | 50.0% | |
| ATGTCCAGTGGTCTTCGAAC+TGG | + | chr7_4:37417344-37417363 | None:intergenic | 50.0% | |
| CCAACACGTAACATGTCCAG+TGG | + | chr7_4:37417356-37417375 | None:intergenic | 50.0% | |
| CCACTGGACATGTTACGTGT+TGG | - | chr7_4:37417353-37417372 | Msa1152170:intron | 50.0% | |
| AAATGCCTCAAGGCAGCGTT+TGG | - | chr7_4:37417425-37417444 | Msa1152170:intron | 50.0% | |
| !!! | AGTCCGTTTTGAAGGGGTAG+TGG | - | chr7_4:37417549-37417568 | Msa1152170:CDS | 50.0% |
| GGGATGGTGAAGCAAAATGG+GGG | - | chr7_4:37417796-37417815 | Msa1152170:intron | 50.0% | |
| !! | GGAGGAGTGTGCCGTATTTT+TGG | - | chr7_4:37418162-37418181 | Msa1152170:CDS | 50.0% |
| ! | GGTTCCCAGGAATCTAAGGT+TGG | - | chr7_4:37418280-37418299 | Msa1152170:CDS | 50.0% |
| GCAAAACGTGGGTCAAACGT+CGG | + | chr7_4:37418395-37418414 | None:intergenic | 50.0% | |
| ! | GAGAACCTGGTTTGTCTAGC+AGG | - | chr7_4:37418758-37418777 | Msa1152170:intron | 50.0% |
| ! | ATCCACACCGACTAGAACTC+AGG | - | chr7_4:37418791-37418810 | Msa1152170:CDS | 50.0% |
| ! | TTCCTGAGTTCTAGTCGGTG+TGG | + | chr7_4:37418796-37418815 | None:intergenic | 50.0% |
| ! | ACACCGACTAGAACTCAGGA+AGG | - | chr7_4:37418795-37418814 | Msa1152170:CDS | 50.0% |
| TTCCTGGGAAAGCTAATCCC+AGG | - | chr7_4:37418983-37419002 | Msa1152170:intron | 50.0% | |
| !! | TACCTGGGATTAGCTTTCCC+AGG | + | chr7_4:37418988-37419007 | None:intergenic | 50.0% |
| CATTCCCGGGACTTAGTTGT+AGG | - | chr7_4:37419107-37419126 | Msa1152170:CDS | 50.0% | |
| CACTCCTACAACTAAGTCCC+GGG | + | chr7_4:37419114-37419133 | None:intergenic | 50.0% | |
| GGGACTTAGTTGTAGGAGTG+TGG | - | chr7_4:37419114-37419133 | Msa1152170:CDS | 50.0% | |
| AGATGAGTTGCGTGTTGCCG+GGG | - | chr7_4:37416293-37416312 | Msa1152170:intron | 55.0% | |
| !! | CCAAGACACTTGAGGCGTTG+CGG | - | chr7_4:37416723-37416742 | Msa1152170:intron | 55.0% |
| ! | GTATTAGTTCGGTGGGGGGT+TGG | - | chr7_4:37417113-37417132 | Msa1152170:intron | 55.0% |
| CAGTGGTCTTCGAACTGGGT+TGG | + | chr7_4:37417339-37417358 | None:intergenic | 55.0% | |
| CAACCCAGTTCGAAGACCAC+TGG | - | chr7_4:37417337-37417356 | Msa1152170:intron | 55.0% | |
| TGGTTGCCCAGCCGTATTGC+AGG | - | chr7_4:37415229-37415248 | Msa1152170:intron | 60.0% | |
| CCGCAACGCCTCAAGTGTCT+TGG | + | chr7_4:37416726-37416745 | None:intergenic | 60.0% | |
| !!! | GGTGGGGGGTTGGTTTTGTG+TGG | - | chr7_4:37417123-37417142 | Msa1152170:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 37414535 | 37419716 | 37414535 | ID=Msa1152170;Name=Msa1152170 |
| chr7_4 | mRNA | 37414535 | 37419716 | 37414535 | ID=Msa1152170-mRNA-1;Parent=Msa1152170;Name=Msa1152170-mRNA-1;_AED=0.08;_eAED=0.08;_QI=104|0.77|0.7|1|1|1|10|241|695 |
| chr7_4 | exon | 37414535 | 37414895 | 37414535 | ID=Msa1152170-mRNA-1:exon:8872;Parent=Msa1152170-mRNA-1 |
| chr7_4 | exon | 37416406 | 37416496 | 37416406 | ID=Msa1152170-mRNA-1:exon:8871;Parent=Msa1152170-mRNA-1 |
| chr7_4 | exon | 37416589 | 37416704 | 37416589 | ID=Msa1152170-mRNA-1:exon:8870;Parent=Msa1152170-mRNA-1 |
| chr7_4 | exon | 37416793 | 37416924 | 37416793 | ID=Msa1152170-mRNA-1:exon:8869;Parent=Msa1152170-mRNA-1 |
| chr7_4 | exon | 37417494 | 37417619 | 37417494 | ID=Msa1152170-mRNA-1:exon:8868;Parent=Msa1152170-mRNA-1 |
| chr7_4 | exon | 37417709 | 37417798 | 37417709 | ID=Msa1152170-mRNA-1:exon:8867;Parent=Msa1152170-mRNA-1 |
| chr7_4 | exon | 37417904 | 37417973 | 37417904 | ID=Msa1152170-mRNA-1:exon:8866;Parent=Msa1152170-mRNA-1 |
| chr7_4 | exon | 37418081 | 37418688 | 37418081 | ID=Msa1152170-mRNA-1:exon:8865;Parent=Msa1152170-mRNA-1 |
| chr7_4 | exon | 37418787 | 37418909 | 37418787 | ID=Msa1152170-mRNA-1:exon:8864;Parent=Msa1152170-mRNA-1 |
| chr7_4 | exon | 37419001 | 37419716 | 37419001 | ID=Msa1152170-mRNA-1:exon:8863;Parent=Msa1152170-mRNA-1 |
| chr7_4 | five_prime_UTR | 37419613 | 37419716 | 37419613 | ID=Msa1152170-mRNA-1:five_prime_utr;Parent=Msa1152170-mRNA-1 |
| chr7_4 | CDS | 37419001 | 37419612 | 37419001 | ID=Msa1152170-mRNA-1:cds;Parent=Msa1152170-mRNA-1 |
| chr7_4 | CDS | 37418787 | 37418909 | 37418787 | ID=Msa1152170-mRNA-1:cds;Parent=Msa1152170-mRNA-1 |
| chr7_4 | CDS | 37418081 | 37418688 | 37418081 | ID=Msa1152170-mRNA-1:cds;Parent=Msa1152170-mRNA-1 |
| chr7_4 | CDS | 37417904 | 37417973 | 37417904 | ID=Msa1152170-mRNA-1:cds;Parent=Msa1152170-mRNA-1 |
| chr7_4 | CDS | 37417709 | 37417798 | 37417709 | ID=Msa1152170-mRNA-1:cds;Parent=Msa1152170-mRNA-1 |
| chr7_4 | CDS | 37417494 | 37417619 | 37417494 | ID=Msa1152170-mRNA-1:cds;Parent=Msa1152170-mRNA-1 |
| chr7_4 | CDS | 37416793 | 37416924 | 37416793 | ID=Msa1152170-mRNA-1:cds;Parent=Msa1152170-mRNA-1 |
| chr7_4 | CDS | 37416589 | 37416704 | 37416589 | ID=Msa1152170-mRNA-1:cds;Parent=Msa1152170-mRNA-1 |
| chr7_4 | CDS | 37416406 | 37416496 | 37416406 | ID=Msa1152170-mRNA-1:cds;Parent=Msa1152170-mRNA-1 |
| chr7_4 | CDS | 37414776 | 37414895 | 37414776 | ID=Msa1152170-mRNA-1:cds;Parent=Msa1152170-mRNA-1 |
| chr7_4 | three_prime_UTR | 37414535 | 37414775 | 37414535 | ID=Msa1152170-mRNA-1:three_prime_utr;Parent=Msa1152170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
