Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0352050 | XP_039685079.1 | 78.522 | 717 | 120 | 1 | 1 | 717 | 1 | 683 | 0.0 | 1139 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0352050 | sp|O65278|ULP1B_ARATH | 25.229 | 218 | 140 | 8 | 477 | 688 | 141 | 341 | 2.20e-12 | 72.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0352050 | A0A072TKR8 | 63.000 | 400 | 46 | 4 | 1 | 399 | 1 | 299 | 1.03e-155 | 462 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027680 | Msa0352050 | 0.849965 | 2.304289e-60 | -8.615850e-47 |
| Msa0210730 | Msa0352050 | 0.856873 | 2.395723e-62 | -8.615850e-47 |
| Msa0317780 | Msa0352050 | 0.883704 | 3.581150e-71 | -8.615850e-47 |
| Msa0342760 | Msa0352050 | 0.917650 | 4.097002e-86 | -8.615850e-47 |
| Msa0352050 | Msa0760130 | 0.801594 | 8.364790e-49 | -8.615850e-47 |
| Msa0352050 | Msa0878530 | 0.875807 | 2.303612e-68 | -8.615850e-47 |
| Msa0352050 | Msa0900920 | 0.897445 | 1.396569e-76 | -8.615850e-47 |
| Msa0352050 | Msa0952380 | 0.851123 | 1.089542e-60 | -8.615850e-47 |
| Msa0352050 | Msa0954640 | 0.837657 | 4.568198e-57 | -8.615850e-47 |
| Msa0352050 | Msa1025910 | 0.914485 | 1.814439e-84 | -8.615850e-47 |
| Msa0352050 | Msa1121490 | 0.800599 | 1.336639e-48 | -8.615850e-47 |
| Msa0352050 | Msa1152170 | 0.825300 | 5.052573e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0352050 | MtrunA17_Chr6g0474521 | 69.159 | 321 | 58 | 1 | 42 | 362 | 1 | 280 | 5.42e-151 | 440 |
| Msa0352050 | MtrunA17_Chr1g0162981 | 62.838 | 148 | 51 | 1 | 256 | 399 | 1 | 148 | 1.29e-54 | 184 |
| Msa0352050 | MtrunA17_Chr4g0074621 | 91.209 | 91 | 8 | 0 | 1 | 91 | 1 | 91 | 3.18e-51 | 172 |
| Msa0352050 | MtrunA17_Chr1g0175971 | 91.209 | 91 | 8 | 0 | 1 | 91 | 1 | 91 | 3.18e-51 | 172 |
| Msa0352050 | MtrunA17_Chr7g0265121 | 34.426 | 183 | 113 | 2 | 22 | 198 | 9 | 190 | 6.20e-33 | 125 |
| Msa0352050 | MtrunA17_Chr4g0074611 | 34.426 | 183 | 113 | 2 | 22 | 198 | 9 | 190 | 6.20e-33 | 125 |
| Msa0352050 | MtrunA17_Chr8g0337461 | 82.353 | 68 | 12 | 0 | 1 | 68 | 1 | 68 | 1.22e-31 | 117 |
| Msa0352050 | MtrunA17_Chr4g0012881 | 26.339 | 224 | 147 | 7 | 31 | 246 | 38 | 251 | 4.49e-20 | 94.7 |
| Msa0352050 | MtrunA17_Chr6g0470871 | 55.172 | 58 | 26 | 0 | 23 | 80 | 16 | 73 | 1.77e-14 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0352050 | AT4G15880.1 | 26.160 | 237 | 151 | 8 | 458 | 688 | 271 | 489 | 1.20e-13 | 74.3 |
| Msa0352050 | AT4G00690.1 | 25.229 | 218 | 140 | 8 | 477 | 688 | 141 | 341 | 2.23e-13 | 72.4 |
Find 183 sgRNAs with CRISPR-Local
Find 413 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACGCTCTTAGTACCTATAAT+TGG | 0.159588 | 3_1:+19704964 | Msa0352050:CDS |
| GTTAATATCTACCAACTTAT+TGG | 0.179369 | 3_1:-19704499 | None:intergenic |
| GATACAGTTATACACATTTC+TGG | 0.200591 | 3_1:+19705059 | Msa0352050:CDS |
| CTAGACCTTTGTTTGGCTTT+AGG | 0.220943 | 3_1:+19704696 | Msa0352050:CDS |
| ATGCGTGGAAAACGCTTAAT+TGG | 0.267383 | 3_1:-19705228 | None:intergenic |
| TGAGGTAGTTGATGATTTAA+AGG | 0.268632 | 3_1:+19706484 | Msa0352050:CDS |
| AGATATGTTGGAATCTTCTT+TGG | 0.268674 | 3_1:+19707443 | Msa0352050:CDS |
| TGAGGGAAAACAAACGAAAA+AGG | 0.283246 | 3_1:+19704343 | Msa0352050:CDS |
| ACAAAGGTCTAGATGTTTAA+AGG | 0.286497 | 3_1:-19704685 | None:intergenic |
| TATATAGATAAAGGGGTATT+AGG | 0.287945 | 3_1:-19709416 | None:intergenic |
| AGAAATACATATATAGATAA+AGG | 0.290515 | 3_1:-19709425 | None:intergenic |
| TTAATATAACTGTGTGATTT+CGG | 0.290724 | 3_1:-19704909 | None:intergenic |
| GAGGATATTAAAAGCAAATA+AGG | 0.296971 | 3_1:+19705610 | Msa0352050:CDS |
| TGTGGGATGGTGAAGCAAAA+TGG | 0.309075 | 3_1:+19707633 | Msa0352050:CDS |
| CGCTCTTAGTACCTATAATT+GGG | 0.312086 | 3_1:+19704965 | Msa0352050:CDS |
| ATTTACCAAAGCAACAAAAT+TGG | 0.312599 | 3_1:+19707481 | Msa0352050:CDS |
| TTATCGAAGGTCATATATAA+AGG | 0.331004 | 3_1:+19709484 | Msa0352050:three_prime_UTR |
| GCTTTAGGTTTGCCTATTGT+AGG | 0.336005 | 3_1:+19704711 | Msa0352050:CDS |
| GCTTAATTGGACCACTGGTT+AGG | 0.336914 | 3_1:-19705215 | None:intergenic |
| ATTACCATTCATTCCTATAT+AGG | 0.341293 | 3_1:-19704592 | None:intergenic |
| CATTGGAGTTTACGTCCTTC+AGG | 0.346042 | 3_1:-19706512 | None:intergenic |
| CCTTAGGTTATTAATATTGC+TGG | 0.350091 | 3_1:+19706297 | Msa0352050:intron |
| AACACAAAGATTTGCTTTCC+CGG | 0.362338 | 3_1:+19705564 | Msa0352050:CDS |
| AACAGCAACACCCCAATTAT+AGG | 0.367016 | 3_1:-19704976 | None:intergenic |
| TCTATATATGTATTTCTTTG+AGG | 0.369379 | 3_1:+19709431 | Msa0352050:three_prime_UTR |
| ATGTCCAGTGGTCTTCGAAC+TGG | 0.369613 | 3_1:-19707181 | None:intergenic |
| AACCATTCTCAAGTTGGTAT+TGG | 0.370824 | 3_1:+19705476 | Msa0352050:CDS |
| ATAAAGGGGTATTAGGATAA+AGG | 0.373190 | 3_1:-19709409 | None:intergenic |
| AATAAAGGAGCGAACAATAA+AGG | 0.374187 | 3_1:+19707420 | Msa0352050:CDS |
| GAAATACATATATAGATAAA+GGG | 0.379203 | 3_1:-19709424 | None:intergenic |
| GTAGATGAGTTGCGTGTTGC+CGG | 0.380253 | 3_1:+19706141 | Msa0352050:CDS |
| TGGTTGCCCAGCCGTATTGC+AGG | 0.381669 | 3_1:+19705079 | Msa0352050:CDS |
| GTTTACCGGAAACTAGTGAT+AGG | 0.386283 | 3_1:+19704739 | Msa0352050:CDS |
| CTACGTTGTCCCCTTCTTGA+AGG | 0.389579 | 3_1:-19704836 | None:intergenic |
| TGCAGTATCTAATACAAATC+TGG | 0.391438 | 3_1:-19709263 | None:intergenic |
| CTTCCTACTTCCATGCTACT+TGG | 0.397148 | 3_1:-19705659 | None:intergenic |
| TGATTAGTTGGTTGAGGACT+TGG | 0.400972 | 3_1:+19705406 | Msa0352050:intron |
| GTGGGATGGTGAAGCAAAAT+GGG | 0.404332 | 3_1:+19707634 | Msa0352050:CDS |
| GTGGATATGAAGACCTATAT+AGG | 0.406234 | 3_1:+19704579 | Msa0352050:CDS |
| AAATGCCTCAAGGCAGCGTT+TGG | 0.407622 | 3_1:+19707265 | Msa0352050:CDS |
| GTAGTGGAATTGATGAATAA+AGG | 0.409455 | 3_1:+19707405 | Msa0352050:CDS |
| TTTGTCTAACTTGATTGTGC+TGG | 0.411331 | 3_1:+19709323 | Msa0352050:three_prime_UTR |
| CTAACCCTATCACTAGTTTC+CGG | 0.415358 | 3_1:-19704744 | None:intergenic |
| CAGTGAAATTGTTTGTCGTC+TGG | 0.416799 | 3_1:+19709216 | Msa0352050:CDS |
| TAAACATCTAGACCTTTGTT+TGG | 0.421249 | 3_1:+19704689 | Msa0352050:CDS |
| ACTTCCTCGCCTTCATGCAT+TGG | 0.432506 | 3_1:-19706173 | None:intergenic |
| GGAGTTGGATGATGATGATA+TGG | 0.432653 | 3_1:+19705910 | Msa0352050:CDS |
| TGATGATGATATGGCTGAAA+AGG | 0.433309 | 3_1:+19705919 | Msa0352050:CDS |
| TTTATTCTGCACACATGAAA+AGG | 0.433361 | 3_1:+19705988 | Msa0352050:CDS |
| CTTAATTGGACCACTGGTTA+GGG | 0.433873 | 3_1:-19705214 | None:intergenic |
| TAGGATTTAGAGTAGGCGTT+AGG | 0.437463 | 3_1:+19704655 | Msa0352050:CDS |
| ATCTACCAACTTATTGGTAC+GGG | 0.443644 | 3_1:-19704493 | None:intergenic |
| GGTATATGTTCTTAAGTACT+TGG | 0.444660 | 3_1:+19707607 | Msa0352050:CDS |
| TATGTTGGAATCTTCTTTGG+AGG | 0.445095 | 3_1:+19707446 | Msa0352050:CDS |
| TTCAATACCTGCAATACGGC+TGG | 0.445664 | 3_1:-19705086 | None:intergenic |
| TCTTCATATCCACAAGATAT+CGG | 0.446334 | 3_1:-19704569 | None:intergenic |
| AATGAATGGTAATTTATTGA+AGG | 0.447160 | 3_1:+19704602 | Msa0352050:CDS |
| AGCAAATAAGGTTGACGGTA+GGG | 0.449525 | 3_1:+19705622 | Msa0352050:CDS |
| TTGGAAGAAGAAAATGATGA+TGG | 0.450909 | 3_1:+19705818 | Msa0352050:CDS |
| TTCTTTGGAGGTTGTAGTGG+TGG | 0.452564 | 3_1:+19707458 | Msa0352050:CDS |
| TTTGCGCATCAGACAATGTT+CGG | 0.454164 | 3_1:-19704521 | None:intergenic |
| GGTAAACACTCTCCTACAAT+AGG | 0.455224 | 3_1:-19704723 | None:intergenic |
| TGAATTTCCGCTCAGTCCAT+TGG | 0.455335 | 3_1:-19706529 | None:intergenic |
| TTCTTAAGTACTTGGAGTTG+TGG | 0.459941 | 3_1:+19707615 | Msa0352050:CDS |
| AAGATTGATGCGGATAATGA+TGG | 0.460099 | 3_1:+19705713 | Msa0352050:CDS |
| TAGATGAGTTGCGTGTTGCC+GGG | 0.464352 | 3_1:+19706142 | Msa0352050:CDS |
| TTAATGTGATTAGTTGGTTG+AGG | 0.466558 | 3_1:+19705400 | Msa0352050:intron |
| GGAAAGCAAATCTTTGTGTT+CGG | 0.477390 | 3_1:-19705561 | None:intergenic |
| AGGTGGGATGCAAGTAGCTT+AGG | 0.478297 | 3_1:+19704636 | Msa0352050:CDS |
| TCTTAAGTACTTGGAGTTGT+GGG | 0.482984 | 3_1:+19707616 | Msa0352050:CDS |
| TAATATTCGTTGGTGTATCA+TGG | 0.485490 | 3_1:+19709376 | Msa0352050:three_prime_UTR |
| CATGTTACGTGTTGGACCAT+AGG | 0.488808 | 3_1:+19707201 | Msa0352050:CDS |
| AATATTCAATACCTGCAATA+CGG | 0.491166 | 3_1:-19705090 | None:intergenic |
| TATTGTAGGAGAGTGTTTAC+CGG | 0.495009 | 3_1:+19704725 | Msa0352050:CDS |
| AGAAAATGATGGGATGAAGT+TGG | 0.497063 | 3_1:+19705763 | Msa0352050:CDS |
| AAGACCTATATAGGAATGAA+TGG | 0.499028 | 3_1:+19704588 | Msa0352050:CDS |
| TATCTACCAACTTATTGGTA+CGG | 0.500669 | 3_1:-19704494 | None:intergenic |
| TGAAGGAATTATTGCATAGG+TGG | 0.500937 | 3_1:+19704619 | Msa0352050:CDS |
| ACCAACTTGAGAATGGTTAA+CGG | 0.500987 | 3_1:-19705471 | None:intergenic |
| AACATGACCTCCATCCACTT+TGG | 0.501951 | 3_1:-19705262 | None:intergenic |
| AAGCTGAAGGTCCTTCAAGA+AGG | 0.502318 | 3_1:+19704825 | Msa0352050:CDS |
| ATCCTCAAGGATTGAAACCC+GGG | 0.502408 | 3_1:-19705582 | None:intergenic |
| TAAAGACAATGGGATGGAGT+TGG | 0.505100 | 3_1:+19705895 | Msa0352050:CDS |
| CTCCAATACCAACTTGAGAA+TGG | 0.505693 | 3_1:-19705478 | None:intergenic |
| CATACATTGTCCTCTTCCTA+TGG | 0.507544 | 3_1:-19707217 | None:intergenic |
| AGCATTACCAATGAATAGTC+GGG | 0.509033 | 3_1:-19707671 | None:intergenic |
| ATGGAAGAAGATAAAGACAA+TGG | 0.509362 | 3_1:+19705884 | Msa0352050:CDS |
| AAGCATTACCAATGAATAGT+CGG | 0.511109 | 3_1:-19707672 | None:intergenic |
| ATCTTCTTTGGAGGTTGTAG+TGG | 0.519883 | 3_1:+19707455 | Msa0352050:CDS |
| TGGAAGAAGATAAAGACAAT+GGG | 0.520727 | 3_1:+19705885 | Msa0352050:CDS |
| GCCGTTAACCATTCTCAAGT+TGG | 0.520859 | 3_1:+19705470 | Msa0352050:CDS |
| GAAGAGGACAATGTATGTGC+TGG | 0.521423 | 3_1:+19707223 | Msa0352050:CDS |
| AGGTTATTAATATTGCTGGC+AGG | 0.523648 | 3_1:+19706301 | Msa0352050:intron |
| ACTTACAGGAGGATATCCTT+CGG | 0.524242 | 3_1:+19709188 | Msa0352050:intron |
| TTAAAAGCAAATAAGGTTGA+CGG | 0.525394 | 3_1:+19705617 | Msa0352050:CDS |
| GGAAAAGCAGAAGAAAATGA+TGG | 0.528960 | 3_1:+19705752 | Msa0352050:CDS |
| GATGGGTTGAAAAGTGAGGC+GGG | 0.530008 | 3_1:+19705731 | Msa0352050:CDS |
| CCGCAACGCCTCAAGTGTCT+TGG | 0.532629 | 3_1:-19706573 | None:intergenic |
| AATGCATGAAGGCGAGGAAG+TGG | 0.532769 | 3_1:+19706175 | Msa0352050:CDS |
| ATACCCGCGGATTTATTGAT+CGG | 0.534688 | 3_1:+19709289 | Msa0352050:CDS |
| AAAACGCTTAATTGGACCAC+TGG | 0.534869 | 3_1:-19705220 | None:intergenic |
| GAGTATGCCCGACTATTCAT+TGG | 0.535075 | 3_1:+19707664 | Msa0352050:CDS |
| AGCTGAAGGTCCTTCAAGAA+GGG | 0.538805 | 3_1:+19704826 | Msa0352050:CDS |
| ACACAAAGATTTGCTTTCCC+GGG | 0.543023 | 3_1:+19705565 | Msa0352050:CDS |
| AACTCCGTTCCGATATCTTG+TGG | 0.543524 | 3_1:+19704560 | Msa0352050:CDS |
| GAACAATAAAGGAGATATGT+TGG | 0.549679 | 3_1:+19707431 | Msa0352050:CDS |
| CAATCCTTGAGGATGATATG+AGG | 0.550170 | 3_1:+19705591 | Msa0352050:CDS |
| CTTATATGGCTGAACATCAA+AGG | 0.550916 | 3_1:+19705531 | Msa0352050:CDS |
| TGTCCAGTGGTCTTCGAACT+GGG | 0.551007 | 3_1:-19707180 | None:intergenic |
| GGCATTTGAGTCTTTATCTG+TGG | 0.552622 | 3_1:-19704471 | None:intergenic |
| AGTAGCATGGAAGTAGGAAG+TGG | 0.553313 | 3_1:+19705662 | Msa0352050:CDS |
| TTTACCGGAAACTAGTGATA+GGG | 0.559975 | 3_1:+19704740 | Msa0352050:CDS |
| GAAGGAATTATTGCATAGGT+GGG | 0.560436 | 3_1:+19704620 | Msa0352050:CDS |
| TATTCCGATGCCAAGTAGCA+TGG | 0.561626 | 3_1:+19705649 | Msa0352050:CDS |
| TTCCCGGGTTTCAATCCTTG+AGG | 0.561883 | 3_1:+19705580 | Msa0352050:CDS |
| CATCCTCAAGGATTGAAACC+CGG | 0.563868 | 3_1:-19705583 | None:intergenic |
| TCAAGATGTATATGCCTCGT+TGG | 0.564996 | 3_1:+19706549 | Msa0352050:CDS |
| AAGCAAATAAGGTTGACGGT+AGG | 0.567979 | 3_1:+19705621 | Msa0352050:CDS |
| AGAAAATGATGATGGGATGA+AGG | 0.570797 | 3_1:+19705826 | Msa0352050:CDS |
| ATTCCACTACCCCTTCAAAA+CGG | 0.572945 | 3_1:-19707392 | None:intergenic |
| AATGCCCCGTACCAATAAGT+TGG | 0.573173 | 3_1:+19704488 | Msa0352050:CDS |
| CAACCCAGTTCGAAGACCAC+TGG | 0.574509 | 3_1:+19707177 | Msa0352050:CDS |
| CATGATGAAGTTCGAAAACA+TGG | 0.575114 | 3_1:+19706333 | Msa0352050:CDS |
| AAATACATATATAGATAAAG+GGG | 0.575274 | 3_1:-19709423 | None:intergenic |
| ATATCCTCATATCATCCTCA+AGG | 0.575345 | 3_1:-19705595 | None:intergenic |
| TATTGAAGGAATTATTGCAT+AGG | 0.577939 | 3_1:+19704616 | Msa0352050:CDS |
| TATGGCTGAACATCAAAGGT+TGG | 0.580692 | 3_1:+19705535 | Msa0352050:CDS |
| AGATGAGTTGCGTGTTGCCG+GGG | 0.584197 | 3_1:+19706143 | Msa0352050:CDS |
| TTGGTCCAATTGTTAATGCG+TGG | 0.585880 | 3_1:-19705243 | None:intergenic |
| ACTTCCATGCTACTTGGCAT+CGG | 0.586687 | 3_1:-19705653 | None:intergenic |
| AGAAGATAAAGACAATGGGA+TGG | 0.587623 | 3_1:+19705889 | Msa0352050:CDS |
| CTGAAGGACGTAAACTCCAA+TGG | 0.587862 | 3_1:+19706513 | Msa0352050:CDS |
| AATTGAAAATCTTAGTAGTG+CGG | 0.588744 | 3_1:+19705010 | Msa0352050:CDS |
| GAAGGTTGATGATGAAGATG+TGG | 0.591676 | 3_1:+19705844 | Msa0352050:CDS |
| TAGTGTACATTCTAAGCTGA+AGG | 0.592478 | 3_1:+19704812 | Msa0352050:CDS |
| AACAATTGGACCAAAGTGGA+TGG | 0.592872 | 3_1:+19705252 | Msa0352050:CDS |
| GAAAAGCAGAAGAAAATGAT+GGG | 0.594943 | 3_1:+19705753 | Msa0352050:CDS |
| CAGTGGTCTTCGAACTGGGT+TGG | 0.595890 | 3_1:-19707176 | None:intergenic |
| ATGCATGAAGGCGAGGAAGT+GGG | 0.596800 | 3_1:+19706176 | Msa0352050:CDS |
| TAACCGATCAATAAATCCGC+GGG | 0.596912 | 3_1:-19709292 | None:intergenic |
| GATTTAAAGGCACATCCTGA+AGG | 0.597377 | 3_1:+19706497 | Msa0352050:CDS |
| AGTAGCTTAGGATTTAGAGT+AGG | 0.598830 | 3_1:+19704648 | Msa0352050:CDS |
| CATTAACAATTGGACCAAAG+TGG | 0.599981 | 3_1:+19705248 | Msa0352050:CDS |
| TCAATACCTGCAATACGGCT+GGG | 0.600754 | 3_1:-19705085 | None:intergenic |
| TGATGAAGATGTTGGTGAAG+AGG | 0.600999 | 3_1:+19705787 | Msa0352050:CDS |
| CCACTGGACATGTTACGTGT+TGG | 0.601741 | 3_1:+19707193 | Msa0352050:CDS |
| ACGTGTTGGACCATAGGAAG+AGG | 0.602868 | 3_1:+19707207 | Msa0352050:CDS |
| TAGAGTAGGCGTTAGGACTG+TGG | 0.605350 | 3_1:+19704662 | Msa0352050:CDS |
| ATGCCAAGTAGCATGGAAGT+AGG | 0.607349 | 3_1:+19705656 | Msa0352050:CDS |
| GGAAGTGGGTCAAAACATGT+AGG | 0.610645 | 3_1:+19705677 | Msa0352050:CDS |
| TGGAAGAAGAAAATGATGAT+GGG | 0.616216 | 3_1:+19705819 | Msa0352050:CDS |
| CCAAGACACTTGAGGCGTTG+CGG | 0.618422 | 3_1:+19706573 | Msa0352050:CDS |
| GGTTCCAACACAACAAGACA+TGG | 0.619501 | 3_1:+19705427 | Msa0352050:CDS |
| TGGGATGGTGAAGCAAAATG+GGG | 0.623459 | 3_1:+19707635 | Msa0352050:CDS |
| TGATGGGTTGAAAAGTGAGG+CGG | 0.624829 | 3_1:+19705730 | Msa0352050:CDS |
| GCAGCGTTTGGATAATGCAA+TGG | 0.628794 | 3_1:+19707277 | Msa0352050:CDS |
| GTCATTTGATTAGATATGGG+CGG | 0.632926 | 3_1:+19705179 | Msa0352050:intron |
| CAATTTCACTGCGAATCCGA+AGG | 0.633824 | 3_1:-19709204 | None:intergenic |
| GAACATTGTCTGATGCGCAA+AGG | 0.634154 | 3_1:+19704523 | Msa0352050:CDS |
| GCTGAAGGTCCTTCAAGAAG+GGG | 0.635073 | 3_1:+19704827 | Msa0352050:CDS |
| AAGTACTTGGAGTTGTGGGA+TGG | 0.635913 | 3_1:+19707620 | Msa0352050:CDS |
| AAGGTTGATGATGAAGATGT+GGG | 0.641554 | 3_1:+19705845 | Msa0352050:CDS |
| AAGTTGGATGATGAAGATGT+TGG | 0.645218 | 3_1:+19705779 | Msa0352050:CDS |
| ATTATCCAAACGCTGCCTTG+AGG | 0.647660 | 3_1:-19707270 | None:intergenic |
| CGGAAAATATAACACACACA+AGG | 0.655010 | 3_1:-19704889 | None:intergenic |
| ACAGTGAAAGAAATGCCTCA+AGG | 0.655287 | 3_1:+19707255 | Msa0352050:CDS |
| AGATTGATGCGGATAATGAT+GGG | 0.662184 | 3_1:+19705714 | Msa0352050:CDS |
| TAATGATGGGTTGAAAAGTG+AGG | 0.663934 | 3_1:+19705727 | Msa0352050:CDS |
| AATTGGACCAAAGTGGATGG+AGG | 0.668982 | 3_1:+19705255 | Msa0352050:CDS |
| GCAAACCTAAAGCCAAACAA+AGG | 0.673782 | 3_1:-19704701 | None:intergenic |
| GTAGCATGGAAGTAGGAAGT+GGG | 0.674257 | 3_1:+19705663 | Msa0352050:CDS |
| TCGTTGGACCAAGACACTTG+AGG | 0.677045 | 3_1:+19706565 | Msa0352050:CDS |
| GAACATTTATCCCTAACCAG+TGG | 0.678694 | 3_1:+19705204 | Msa0352050:CDS |
| GCTCTTAGTACCTATAATTG+GGG | 0.679670 | 3_1:+19704966 | Msa0352050:CDS |
| TTAACCGATCAATAAATCCG+CGG | 0.698985 | 3_1:-19709293 | None:intergenic |
| ATATCCACAAGATATCGGAA+CGG | 0.702922 | 3_1:-19704564 | None:intergenic |
| CCAACACGTAACATGTCCAG+TGG | 0.705795 | 3_1:-19707193 | None:intergenic |
| GTAAACTCCAATGGACTGAG+CGG | 0.711805 | 3_1:+19706522 | Msa0352050:CDS |
| TCAAGTGTCTTGGTCCAACG+AGG | 0.711931 | 3_1:-19706563 | None:intergenic |
| AGATACTGCAAAGATACCCG+CGG | 0.714457 | 3_1:+19709276 | Msa0352050:CDS |
| TCTACCAACTTATTGGTACG+GGG | 0.719408 | 3_1:-19704492 | None:intergenic |
| GGGATGGTGAAGCAAAATGG+GGG | 0.720669 | 3_1:+19707636 | Msa0352050:CDS |
| AAAGTGTAGTAAGATTGATG+CGG | 0.726301 | 3_1:+19705703 | Msa0352050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCTAAATTAAAACAAAAA+AGG | - | chr3_1:19706231-19706250 | None:intergenic | 10.0% |
| !! | TATTTAATCGTAAAATAAAT+TGG | - | chr3_1:19707931-19707950 | None:intergenic | 10.0% |
| !!! | TTTTCATTTAAAAAAAATTG+AGG | - | chr3_1:19708428-19708447 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTTAAAGTGTT+TGG | + | chr3_1:19708911-19708930 | Msa0352050:intron | 10.0% |
| !! | TACTAAATACTAATATATTA+TGG | + | chr3_1:19709127-19709146 | Msa0352050:intron | 10.0% |
| !! | ACTAAATACTAATATATTAT+GGG | + | chr3_1:19709128-19709147 | Msa0352050:intron | 10.0% |
| !! | ATTAAAACAAAAAAGGTTAA+CGG | - | chr3_1:19706224-19706243 | None:intergenic | 15.0% |
| !! | ACATAAATAAAAGTAAGTAA+TGG | - | chr3_1:19706273-19706292 | None:intergenic | 15.0% |
| !!! | AATTTTGTCAGATTATTTTT+CGG | + | chr3_1:19706371-19706390 | Msa0352050:CDS | 15.0% |
| !!! | AACTCTTAAATAAATTGTTT+TGG | + | chr3_1:19707307-19707326 | Msa0352050:intron | 15.0% |
| !! | CTAAATACTAATATATTATG+GGG | + | chr3_1:19709129-19709148 | Msa0352050:intron | 15.0% |
| !! | AAATACATATATAGATAAAG+GGG | - | chr3_1:19709426-19709445 | None:intergenic | 15.0% |
| !! | GAAATACATATATAGATAAA+GGG | - | chr3_1:19709427-19709446 | None:intergenic | 15.0% |
| !! | AGAAATACATATATAGATAA+AGG | - | chr3_1:19709428-19709447 | None:intergenic | 15.0% |
| !!! | ATGTAATTGTTTGTGTTTTA+TGG | + | chr3_1:19704417-19704436 | Msa0352050:intron | 20.0% |
| !! | AATGAATGGTAATTTATTGA+AGG | + | chr3_1:19704602-19704621 | Msa0352050:CDS | 20.0% |
| !! | TTAATATAACTGTGTGATTT+CGG | - | chr3_1:19704912-19704931 | None:intergenic | 20.0% |
| !!! | ATTTGTCATTTGATTAGATA+TGG | + | chr3_1:19705175-19705194 | Msa0352050:intron | 20.0% |
| !!! | TTTGTCATTTGATTAGATAT+GGG | + | chr3_1:19705176-19705195 | Msa0352050:intron | 20.0% |
| !!! | TTTTATTTATGTATTGCCTT+AGG | + | chr3_1:19706281-19706300 | Msa0352050:intron | 20.0% |
| !! | TTATAATTAATGTTAGGCAT+GGG | - | chr3_1:19706456-19706475 | None:intergenic | 20.0% |
| !! | ATTATAATTAATGTTAGGCA+TGG | - | chr3_1:19706457-19706476 | None:intergenic | 20.0% |
| !! | CTGCAATTATAATTAATGTT+AGG | - | chr3_1:19706462-19706481 | None:intergenic | 20.0% |
| !! | TTAATTATAATTGCAGTTTG+AGG | + | chr3_1:19706466-19706485 | Msa0352050:intron | 20.0% |
| !! | TCATTGACATCAAATTTATT+AGG | - | chr3_1:19707075-19707094 | None:intergenic | 20.0% |
| !! | TTGATATATTACTTGTGTAT+AGG | + | chr3_1:19707535-19707554 | Msa0352050:intron | 20.0% |
| !! | TGATATATTACTTGTGTATA+GGG | + | chr3_1:19707536-19707555 | Msa0352050:intron | 20.0% |
| !! | CCATTATAATTCCAAAAATA+CGG | - | chr3_1:19708016-19708035 | None:intergenic | 20.0% |
| !!! | CGTATTTTTGGAATTATAAT+GGG | + | chr3_1:19708014-19708033 | Msa0352050:intron | 20.0% |
| !! | AATAACTCACTAGAATATAT+GGG | + | chr3_1:19708071-19708090 | Msa0352050:intron | 20.0% |
| !! | TTGTTTGAGGAAAATAAAAA+TGG | + | chr3_1:19708099-19708118 | Msa0352050:intron | 20.0% |
| !! | TATTTGACAGGAATAAAAAT+GGG | - | chr3_1:19708257-19708276 | None:intergenic | 20.0% |
| !! | TTCAACAATCAATTTCATAT+AGG | - | chr3_1:19708353-19708372 | None:intergenic | 20.0% |
| !!! | CAAGAATTATTTTCTTTTGT+CGG | + | chr3_1:19708468-19708487 | Msa0352050:intron | 20.0% |
| !!! | ATGATTTTATTTTCAAACGA+GGG | - | chr3_1:19709037-19709056 | None:intergenic | 20.0% |
| !! | TCGTTTGAAAATAAAATCAT+GGG | + | chr3_1:19709037-19709056 | Msa0352050:intron | 20.0% |
| !! | TCTATATATGTATTTCTTTG+AGG | + | chr3_1:19709431-19709450 | Msa0352050:three_prime_UTR | 20.0% |
| !! | TTCGATAACAAAACAAAAAA+AGG | - | chr3_1:19709472-19709491 | None:intergenic | 20.0% |
| !!! | TTTTTTTGTTTTGTTATCGA+AGG | + | chr3_1:19709471-19709490 | Msa0352050:three_prime_UTR | 20.0% |
| ! | GTTAATATCTACCAACTTAT+TGG | - | chr3_1:19704502-19704521 | None:intergenic | 25.0% |
| ! | ATTACCATTCATTCCTATAT+AGG | - | chr3_1:19704595-19704614 | None:intergenic | 25.0% |
| ! | TATTGAAGGAATTATTGCAT+AGG | + | chr3_1:19704616-19704635 | Msa0352050:CDS | 25.0% |
| ! | AATTGAAAATCTTAGTAGTG+CGG | + | chr3_1:19705010-19705029 | Msa0352050:CDS | 25.0% |
| ! | AATATTCAATACCTGCAATA+CGG | - | chr3_1:19705093-19705112 | None:intergenic | 25.0% |
| !!! | TGCAGGTATTGAATATTAAA+TGG | + | chr3_1:19705096-19705115 | Msa0352050:intron | 25.0% |
| !!! | GCAGGTATTGAATATTAAAT+GGG | + | chr3_1:19705097-19705116 | Msa0352050:intron | 25.0% |
| ! | TTGCCTTTAGTATATTAACT+CGG | + | chr3_1:19705323-19705342 | Msa0352050:intron | 25.0% |
| ! | TTACCGAGTTAATATACTAA+AGG | - | chr3_1:19705329-19705348 | None:intergenic | 25.0% |
| ! | TAGTATATTAACTCGGTAAA+TGG | + | chr3_1:19705330-19705349 | Msa0352050:intron | 25.0% |
| ! | AGTATATTAACTCGGTAAAT+GGG | + | chr3_1:19705331-19705350 | Msa0352050:intron | 25.0% |
| ! | ACCTATTTAATGTGATTAGT+TGG | + | chr3_1:19705394-19705413 | Msa0352050:intron | 25.0% |
| ! | ACCAACTAATCACATTAAAT+AGG | - | chr3_1:19705398-19705417 | None:intergenic | 25.0% |
| ! | GAGGATATTAAAAGCAAATA+AGG | + | chr3_1:19705610-19705629 | Msa0352050:CDS | 25.0% |
| ! | TTAAAAGCAAATAAGGTTGA+CGG | + | chr3_1:19705617-19705636 | Msa0352050:CDS | 25.0% |
| !!! | TTTTTTTAGTGTGTTATGTG+AGG | + | chr3_1:19706119-19706138 | Msa0352050:intron | 25.0% |
| ! | ATACTCTAATGAAAGAAAAC+AGG | - | chr3_1:19706754-19706773 | None:intergenic | 25.0% |
| ! | ATATTTGAATTGACAGAACA+AGG | + | chr3_1:19706798-19706817 | Msa0352050:intron | 25.0% |
| ! | TCAAATATAGAGAATAATGC+TGG | + | chr3_1:19706873-19706892 | Msa0352050:intron | 25.0% |
| ! | AAACAAAACTCGCAAAATTA+GGG | - | chr3_1:19707033-19707052 | None:intergenic | 25.0% |
| ! | AAAACAAAACTCGCAAAATT+AGG | - | chr3_1:19707034-19707053 | None:intergenic | 25.0% |
| ! | ATTTACCAAAGCAACAAAAT+TGG | + | chr3_1:19707481-19707500 | Msa0352050:CDS | 25.0% |
| !! | GCTTTCAGTTTTCAATATAT+TGG | - | chr3_1:19707862-19707881 | None:intergenic | 25.0% |
| ! | AATTAGAATTGTTAAGACTC+AGG | + | chr3_1:19707882-19707901 | Msa0352050:intron | 25.0% |
| ! | TGAATGTTGTATCTATTGTT+TGG | + | chr3_1:19707969-19707988 | Msa0352050:intron | 25.0% |
| ! | GAATGTTGTATCTATTGTTT+GGG | + | chr3_1:19707970-19707989 | Msa0352050:intron | 25.0% |
| !!! | CCGTATTTTTGGAATTATAA+TGG | + | chr3_1:19708013-19708032 | Msa0352050:intron | 25.0% |
| !!! | ATGTTATGTTAATTTGTTCC+CGG | + | chr3_1:19708047-19708066 | Msa0352050:intron | 25.0% |
| ! | GAATAACTCACTAGAATATA+TGG | + | chr3_1:19708070-19708089 | Msa0352050:intron | 25.0% |
| !!! | ACTGTCATTATTTTTTTCCT+GGG | - | chr3_1:19708208-19708227 | None:intergenic | 25.0% |
| !!! | AACTGTCATTATTTTTTTCC+TGG | - | chr3_1:19708209-19708228 | None:intergenic | 25.0% |
| ! | CTATTTGACAGGAATAAAAA+TGG | - | chr3_1:19708258-19708277 | None:intergenic | 25.0% |
| !! | CATTTTTATTCCTGTCAAAT+AGG | + | chr3_1:19708256-19708275 | Msa0352050:intron | 25.0% |
| !! | ATTTTCACAGAAATTTACCT+GGG | - | chr3_1:19708298-19708317 | None:intergenic | 25.0% |
| ! | AACAATCAATTTCATATAGG+AGG | - | chr3_1:19708350-19708369 | None:intergenic | 25.0% |
| ! | CATGTGATATCAATATTTCT+TGG | + | chr3_1:19708378-19708397 | Msa0352050:intron | 25.0% |
| !! | GATAATTTTCTTTGTTCCAT+TGG | + | chr3_1:19708492-19708511 | Msa0352050:intron | 25.0% |
| !!! | TAATTCCTGGGAATTTTTTA+TGG | - | chr3_1:19708744-19708763 | None:intergenic | 25.0% |
| ! | TGTTCAATAGTATAATTCCT+GGG | - | chr3_1:19708756-19708775 | None:intergenic | 25.0% |
| ! | TTGTTCAATAGTATAATTCC+TGG | - | chr3_1:19708757-19708776 | None:intergenic | 25.0% |
| !!! | AATGTTGGAATCTTATTTTC+AGG | - | chr3_1:19708799-19708818 | None:intergenic | 25.0% |
| ! | ATTCCAACATTTATATTCCT+GGG | + | chr3_1:19708808-19708827 | Msa0352050:intron | 25.0% |
| ! | TAAAATTGAAACCCAAGAAT+AGG | - | chr3_1:19708896-19708915 | None:intergenic | 25.0% |
| !!! | CATGATTTTATTTTCAAACG+AGG | - | chr3_1:19709038-19709057 | None:intergenic | 25.0% |
| ! | CTCGTTTGAAAATAAAATCA+TGG | + | chr3_1:19709036-19709055 | Msa0352050:intron | 25.0% |
| !!! | TATATAGATAAAGGGGTATT+AGG | - | chr3_1:19709419-19709438 | None:intergenic | 25.0% |
| ! | TTATCGAAGGTCATATATAA+AGG | + | chr3_1:19709484-19709503 | Msa0352050:three_prime_UTR | 25.0% |
| TATCTACCAACTTATTGGTA+CGG | - | chr3_1:19704497-19704516 | None:intergenic | 30.0% | |
| TCTTCATATCCACAAGATAT+CGG | - | chr3_1:19704572-19704591 | None:intergenic | 30.0% | |
| AAGACCTATATAGGAATGAA+TGG | + | chr3_1:19704588-19704607 | Msa0352050:CDS | 30.0% | |
| ACAAAGGTCTAGATGTTTAA+AGG | - | chr3_1:19704688-19704707 | None:intergenic | 30.0% | |
| TAAACATCTAGACCTTTGTT+TGG | + | chr3_1:19704689-19704708 | Msa0352050:CDS | 30.0% | |
| ! | CTGTATCATTCTTTTGTTGA+TGG | - | chr3_1:19705046-19705065 | None:intergenic | 30.0% |
| GATACAGTTATACACATTTC+TGG | + | chr3_1:19705059-19705078 | Msa0352050:CDS | 30.0% | |
| !!! | AAACCTTTTTTCAAATGCGA+AGG | + | chr3_1:19705293-19705312 | Msa0352050:CDS | 30.0% |
| TAACCTTCGCATTTGAAAAA+AGG | - | chr3_1:19705299-19705318 | None:intergenic | 30.0% | |
| ! | TTAATGTGATTAGTTGGTTG+AGG | + | chr3_1:19705400-19705419 | Msa0352050:intron | 30.0% |
| AAGCTTGCACATCAAAAAAA+GGG | - | chr3_1:19705514-19705533 | None:intergenic | 30.0% | |
| TAAGCTTGCACATCAAAAAA+AGG | - | chr3_1:19705515-19705534 | None:intergenic | 30.0% | |
| ! | TTTTGATGTGCAAGCTTATA+TGG | + | chr3_1:19705517-19705536 | Msa0352050:CDS | 30.0% |
| AAAGTGTAGTAAGATTGATG+CGG | + | chr3_1:19705703-19705722 | Msa0352050:CDS | 30.0% | |
| GAAAAGCAGAAGAAAATGAT+GGG | + | chr3_1:19705753-19705772 | Msa0352050:CDS | 30.0% | |
| TGGTGAAGAGGAAAAAAAAT+TGG | + | chr3_1:19705799-19705818 | Msa0352050:CDS | 30.0% | |
| TTGGAAGAAGAAAATGATGA+TGG | + | chr3_1:19705818-19705837 | Msa0352050:CDS | 30.0% | |
| TGGAAGAAGAAAATGATGAT+GGG | + | chr3_1:19705819-19705838 | Msa0352050:CDS | 30.0% | |
| GGGTGAAGAAGAAAAAAAAA+TGG | + | chr3_1:19705865-19705884 | Msa0352050:CDS | 30.0% | |
| ATGGAAGAAGATAAAGACAA+TGG | + | chr3_1:19705884-19705903 | Msa0352050:CDS | 30.0% | |
| TGGAAGAAGATAAAGACAAT+GGG | + | chr3_1:19705885-19705904 | Msa0352050:CDS | 30.0% | |
| TGGCTGAAAAGGAAAAAAAA+AGG | + | chr3_1:19705930-19705949 | Msa0352050:CDS | 30.0% | |
| TTTATTCTGCACACATGAAA+AGG | + | chr3_1:19705988-19706007 | Msa0352050:CDS | 30.0% | |
| !!! | AACTACATTTTTTCATGTCG+CGG | + | chr3_1:19706050-19706069 | Msa0352050:intron | 30.0% |
| CCAGCAATATTAATAACCTA+AGG | - | chr3_1:19706300-19706319 | None:intergenic | 30.0% | |
| CCTTAGGTTATTAATATTGC+TGG | + | chr3_1:19706297-19706316 | Msa0352050:intron | 30.0% | |
| !! | TGTCAGATTATTTTTCGGTA+CGG | + | chr3_1:19706376-19706395 | Msa0352050:intron | 30.0% |
| TAAAGGTTGAATACACATCA+CGG | - | chr3_1:19706429-19706448 | None:intergenic | 30.0% | |
| !! | TGAGGTAGTTGATGATTTAA+AGG | + | chr3_1:19706484-19706503 | Msa0352050:CDS | 30.0% |
| AGTCATCATTATGATGTTGT+AGG | + | chr3_1:19706630-19706649 | Msa0352050:intron | 30.0% | |
| !!! | AGGAGTTTGCTGATTTATTT+TGG | + | chr3_1:19706818-19706837 | Msa0352050:intron | 30.0% |
| !!! | CATTGTGGTTTTGTCTATAT+GGG | + | chr3_1:19706932-19706951 | Msa0352050:intron | 30.0% |
| AACAAAACTCGCAAAATTAG+GGG | - | chr3_1:19707032-19707051 | None:intergenic | 30.0% | |
| ! | GTAGTGGAATTGATGAATAA+AGG | + | chr3_1:19707405-19707424 | Msa0352050:CDS | 30.0% |
| AATAAAGGAGCGAACAATAA+AGG | + | chr3_1:19707420-19707439 | Msa0352050:CDS | 30.0% | |
| GAACAATAAAGGAGATATGT+TGG | + | chr3_1:19707431-19707450 | Msa0352050:CDS | 30.0% | |
| AGATATGTTGGAATCTTCTT+TGG | + | chr3_1:19707443-19707462 | Msa0352050:CDS | 30.0% | |
| !! | ACTAACCAATTTTGTTGCTT+TGG | - | chr3_1:19707489-19707508 | None:intergenic | 30.0% |
| ! | AAATTTTGCAGTCATGATTG+TGG | + | chr3_1:19707584-19707603 | Msa0352050:intron | 30.0% |
| ! | AATTTTGCAGTCATGATTGT+GGG | + | chr3_1:19707585-19707604 | Msa0352050:intron | 30.0% |
| GGTATATGTTCTTAAGTACT+TGG | + | chr3_1:19707607-19707626 | Msa0352050:CDS | 30.0% | |
| AAGCATTACCAATGAATAGT+CGG | - | chr3_1:19707675-19707694 | None:intergenic | 30.0% | |
| CAATTAATCATCATTGACAG+CGG | + | chr3_1:19707776-19707795 | Msa0352050:intron | 30.0% | |
| GCAATTAGGCTGTATATTTA+GGG | - | chr3_1:19707830-19707849 | None:intergenic | 30.0% | |
| TGCAATTAGGCTGTATATTT+AGG | - | chr3_1:19707831-19707850 | None:intergenic | 30.0% | |
| !! | CTATTGTTTGGGTTTTTAAC+TGG | + | chr3_1:19707981-19708000 | Msa0352050:intron | 30.0% |
| !! | TGTTATGTTAATTTGTTCCC+GGG | + | chr3_1:19708048-19708067 | Msa0352050:intron | 30.0% |
| ATATTCTAGTGAGTTATTCC+CGG | - | chr3_1:19708069-19708088 | None:intergenic | 30.0% | |
| GAATTACATATGCCATTGTT+TGG | + | chr3_1:19708142-19708161 | Msa0352050:intron | 30.0% | |
| GGAAGAAAAAAAATATGCCT+TGG | + | chr3_1:19708171-19708190 | Msa0352050:intron | 30.0% | |
| AATAAAAATGGGCAAAACGT+GGG | - | chr3_1:19708246-19708265 | None:intergenic | 30.0% | |
| TTATTCCTGTCAAATAGGAT+TGG | + | chr3_1:19708261-19708280 | Msa0352050:intron | 30.0% | |
| ! | GATTTTCACAGAAATTTACC+TGG | - | chr3_1:19708299-19708318 | None:intergenic | 30.0% |
| ATAGAAGTCCAAACTCAATT+GGG | - | chr3_1:19708525-19708544 | None:intergenic | 30.0% | |
| !!! | GACTTCTATGCATTGATTTT+GGG | + | chr3_1:19708536-19708555 | Msa0352050:intron | 30.0% |
| GATTCCAACATTTATATTCC+TGG | + | chr3_1:19708807-19708826 | Msa0352050:intron | 30.0% | |
| TTTCCCAGGAATATAAATGT+TGG | - | chr3_1:19708814-19708833 | None:intergenic | 30.0% | |
| GGGTTACAAAATTAATACCT+GGG | - | chr3_1:19708843-19708862 | None:intergenic | 30.0% | |
| AGGGTTACAAAATTAATACC+TGG | - | chr3_1:19708844-19708863 | None:intergenic | 30.0% | |
| AATAGGATTCCCAACATTTA+GGG | - | chr3_1:19708879-19708898 | None:intergenic | 30.0% | |
| TATATTTCATTCCGATCTCA+CGG | + | chr3_1:19708996-19709015 | Msa0352050:intron | 30.0% | |
| !! | TTTATTTTCAAACGAGGGTT+GGG | - | chr3_1:19709032-19709051 | None:intergenic | 30.0% |
| !!! | TTTTATTTTCAAACGAGGGT+TGG | - | chr3_1:19709033-19709052 | None:intergenic | 30.0% |
| TGTGTAAGTTATTTGTTTCC+AGG | + | chr3_1:19709061-19709080 | Msa0352050:intron | 30.0% | |
| ACTGTGTATAAAACATTTCC+TGG | - | chr3_1:19709082-19709101 | None:intergenic | 30.0% | |
| TTATACACAGTAACACACAT+TGG | + | chr3_1:19709091-19709110 | Msa0352050:intron | 30.0% | |
| TGTAAGTAAATGCAGTTAGT+TGG | - | chr3_1:19709175-19709194 | None:intergenic | 30.0% | |
| AACTAACTGCATTTACTTAC+AGG | + | chr3_1:19709174-19709193 | Msa0352050:intron | 30.0% | |
| TGCAGTATCTAATACAAATC+TGG | - | chr3_1:19709266-19709285 | None:intergenic | 30.0% | |
| ! | GCGTTTTGTATAATATTCGT+TGG | + | chr3_1:19709366-19709385 | Msa0352050:three_prime_UTR | 30.0% |
| TAATATTCGTTGGTGTATCA+TGG | + | chr3_1:19709376-19709395 | Msa0352050:three_prime_UTR | 30.0% | |
| !! | ATAAAGGGGTATTAGGATAA+AGG | - | chr3_1:19709412-19709431 | None:intergenic | 30.0% |
| TGAGGGAAAACAAACGAAAA+AGG | + | chr3_1:19704343-19704362 | Msa0352050:CDS | 35.0% | |
| GAGGGAAAACAAACGAAAAA+GGG | + | chr3_1:19704344-19704363 | Msa0352050:CDS | 35.0% | |
| ATCTACCAACTTATTGGTAC+GGG | - | chr3_1:19704496-19704515 | None:intergenic | 35.0% | |
| ATATCCACAAGATATCGGAA+CGG | - | chr3_1:19704567-19704586 | None:intergenic | 35.0% | |
| GTGGATATGAAGACCTATAT+AGG | + | chr3_1:19704579-19704598 | Msa0352050:CDS | 35.0% | |
| TGAAGGAATTATTGCATAGG+TGG | + | chr3_1:19704619-19704638 | Msa0352050:CDS | 35.0% | |
| GAAGGAATTATTGCATAGGT+GGG | + | chr3_1:19704620-19704639 | Msa0352050:CDS | 35.0% | |
| ! | AGTAGCTTAGGATTTAGAGT+AGG | + | chr3_1:19704648-19704667 | Msa0352050:CDS | 35.0% |
| !! | TATTGTAGGAGAGTGTTTAC+CGG | + | chr3_1:19704725-19704744 | Msa0352050:CDS | 35.0% |
| TTTACCGGAAACTAGTGATA+GGG | + | chr3_1:19704740-19704759 | Msa0352050:CDS | 35.0% | |
| TAGTGTACATTCTAAGCTGA+AGG | + | chr3_1:19704812-19704831 | Msa0352050:CDS | 35.0% | |
| CGGAAAATATAACACACACA+AGG | - | chr3_1:19704892-19704911 | None:intergenic | 35.0% | |
| ACGCTCTTAGTACCTATAAT+TGG | + | chr3_1:19704964-19704983 | Msa0352050:CDS | 35.0% | |
| CGCTCTTAGTACCTATAATT+GGG | + | chr3_1:19704965-19704984 | Msa0352050:CDS | 35.0% | |
| GCTCTTAGTACCTATAATTG+GGG | + | chr3_1:19704966-19704985 | Msa0352050:CDS | 35.0% | |
| GTCATTTGATTAGATATGGG+CGG | + | chr3_1:19705179-19705198 | Msa0352050:intron | 35.0% | |
| ! | GTTTTCCACGCATTAACAAT+TGG | + | chr3_1:19705238-19705257 | Msa0352050:CDS | 35.0% |
| CATTAACAATTGGACCAAAG+TGG | + | chr3_1:19705248-19705267 | Msa0352050:CDS | 35.0% | |
| !! | TTTTCCATGTCTTGTTGTGT+TGG | - | chr3_1:19705434-19705453 | None:intergenic | 35.0% |
| ACCAACTTGAGAATGGTTAA+CGG | - | chr3_1:19705474-19705493 | None:intergenic | 35.0% | |
| !! | AACCATTCTCAAGTTGGTAT+TGG | + | chr3_1:19705476-19705495 | Msa0352050:CDS | 35.0% |
| CTTATATGGCTGAACATCAA+AGG | + | chr3_1:19705531-19705550 | Msa0352050:CDS | 35.0% | |
| GGAAAGCAAATCTTTGTGTT+CGG | - | chr3_1:19705564-19705583 | None:intergenic | 35.0% | |
| ! | AACACAAAGATTTGCTTTCC+CGG | + | chr3_1:19705564-19705583 | Msa0352050:CDS | 35.0% |
| ATATCCTCATATCATCCTCA+AGG | - | chr3_1:19705598-19705617 | None:intergenic | 35.0% | |
| AAGATTGATGCGGATAATGA+TGG | + | chr3_1:19705713-19705732 | Msa0352050:CDS | 35.0% | |
| AGATTGATGCGGATAATGAT+GGG | + | chr3_1:19705714-19705733 | Msa0352050:CDS | 35.0% | |
| !! | TAATGATGGGTTGAAAAGTG+AGG | + | chr3_1:19705727-19705746 | Msa0352050:CDS | 35.0% |
| GGAAAAGCAGAAGAAAATGA+TGG | + | chr3_1:19705752-19705771 | Msa0352050:CDS | 35.0% | |
| ! | AGAAAATGATGGGATGAAGT+TGG | + | chr3_1:19705763-19705782 | Msa0352050:CDS | 35.0% |
| AAGTTGGATGATGAAGATGT+TGG | + | chr3_1:19705779-19705798 | Msa0352050:CDS | 35.0% | |
| !! | AGAAAATGATGATGGGATGA+AGG | + | chr3_1:19705826-19705845 | Msa0352050:CDS | 35.0% |
| !! | AAGGTTGATGATGAAGATGT+GGG | + | chr3_1:19705845-19705864 | Msa0352050:CDS | 35.0% |
| AGAAGATAAAGACAATGGGA+TGG | + | chr3_1:19705889-19705908 | Msa0352050:CDS | 35.0% | |
| ! | TGATGATGATATGGCTGAAA+AGG | + | chr3_1:19705919-19705938 | Msa0352050:CDS | 35.0% |
| !!! | ACTACATTTTTTCATGTCGC+GGG | + | chr3_1:19706051-19706070 | Msa0352050:intron | 35.0% |
| AGGTTATTAATATTGCTGGC+AGG | + | chr3_1:19706301-19706320 | Msa0352050:intron | 35.0% | |
| CATGATGAAGTTCGAAAACA+TGG | + | chr3_1:19706333-19706352 | Msa0352050:CDS | 35.0% | |
| TGTTAGGCATGGGATAATAA+AGG | - | chr3_1:19706446-19706465 | None:intergenic | 35.0% | |
| AGGTGTAGATGATTTCTGAT+TGG | + | chr3_1:19706650-19706669 | Msa0352050:intron | 35.0% | |
| ! | TTGTCTAGAATGTTGATGAG+TGG | + | chr3_1:19706679-19706698 | Msa0352050:intron | 35.0% |
| ! | TGTCTAGAATGTTGATGAGT+GGG | + | chr3_1:19706680-19706699 | Msa0352050:intron | 35.0% |
| CTCTACCTAAAATTCCCTTT+AGG | + | chr3_1:19706897-19706916 | Msa0352050:intron | 35.0% | |
| !!! | GCATTGTGGTTTTGTCTATA+TGG | + | chr3_1:19706931-19706950 | Msa0352050:intron | 35.0% |
| GGGTTTGTGTTGTATTAGTT+CGG | + | chr3_1:19706952-19706971 | Msa0352050:intron | 35.0% | |
| TTTGTGTTGTATTAGTTCGG+TGG | + | chr3_1:19706955-19706974 | Msa0352050:intron | 35.0% | |
| TTGTGTTGTATTAGTTCGGT+GGG | + | chr3_1:19706956-19706975 | Msa0352050:intron | 35.0% | |
| GCAAAATTAGGGGTTACAAT+AGG | - | chr3_1:19707022-19707041 | None:intergenic | 35.0% | |
| !!! | CGAATTTGTTTTATGCAACG+TGG | + | chr3_1:19707117-19707136 | Msa0352050:intron | 35.0% |
| ! | TTACAGAAAGTCCGTTTTGA+AGG | + | chr3_1:19707381-19707400 | Msa0352050:intron | 35.0% |
| !! | TACAGAAAGTCCGTTTTGAA+GGG | + | chr3_1:19707382-19707401 | Msa0352050:intron | 35.0% |
| TATGTTGGAATCTTCTTTGG+AGG | + | chr3_1:19707446-19707465 | Msa0352050:CDS | 35.0% | |
| ! | ATTTTGCAGTCATGATTGTG+GGG | + | chr3_1:19707586-19707605 | Msa0352050:intron | 35.0% |
| TTCTTAAGTACTTGGAGTTG+TGG | + | chr3_1:19707615-19707634 | Msa0352050:CDS | 35.0% | |
| TCTTAAGTACTTGGAGTTGT+GGG | + | chr3_1:19707616-19707635 | Msa0352050:CDS | 35.0% | |
| AGCATTACCAATGAATAGTC+GGG | - | chr3_1:19707674-19707693 | None:intergenic | 35.0% | |
| ATTGGATGTCTACTGCAATT+AGG | - | chr3_1:19707844-19707863 | None:intergenic | 35.0% | |
| TAGAATTGTTAAGACTCAGG+TGG | + | chr3_1:19707885-19707904 | Msa0352050:intron | 35.0% | |
| !! | TTGTTTGGGTTTTTAACTGG+AGG | + | chr3_1:19707984-19708003 | Msa0352050:intron | 35.0% |
| TATTCTAGTGAGTTATTCCC+GGG | - | chr3_1:19708068-19708087 | None:intergenic | 35.0% | |
| GGAAAATAAAAATGGTTCCC+AGG | + | chr3_1:19708107-19708126 | Msa0352050:intron | 35.0% | |
| AATTCCAACCTTAGATTCCT+GGG | - | chr3_1:19708127-19708146 | None:intergenic | 35.0% | |
| TAATTCCAACCTTAGATTCC+TGG | - | chr3_1:19708128-19708147 | None:intergenic | 35.0% | |
| ATATGCCATTGTTTGGTAGA+TGG | + | chr3_1:19708149-19708168 | Msa0352050:intron | 35.0% | |
| TATGCCATTGTTTGGTAGAT+GGG | + | chr3_1:19708150-19708169 | Msa0352050:intron | 35.0% | |
| CCTGGGTATAATTTATTCCA+AGG | - | chr3_1:19708191-19708210 | None:intergenic | 35.0% | |
| CCTTGGAATAAATTATACCC+AGG | + | chr3_1:19708188-19708207 | Msa0352050:intron | 35.0% | |
| GAATAAAAATGGGCAAAACG+TGG | - | chr3_1:19708247-19708266 | None:intergenic | 35.0% | |
| ACTTTCCAATCCTATTTGAC+AGG | - | chr3_1:19708269-19708288 | None:intergenic | 35.0% | |
| !!! | GATTGGAAAGTTTTATTCCC+AGG | + | chr3_1:19708278-19708297 | Msa0352050:intron | 35.0% |
| !! | AGGTGATAAGCATTGGTTAA+GGG | - | chr3_1:19708330-19708349 | None:intergenic | 35.0% |
| ATATAGGAGGTGATAAGCAT+TGG | - | chr3_1:19708337-19708356 | None:intergenic | 35.0% | |
| TCAATTGGGGAAAATTCCAA+TGG | - | chr3_1:19708511-19708530 | None:intergenic | 35.0% | |
| ! | GAATTTTCCCCAATTGAGTT+TGG | + | chr3_1:19708514-19708533 | Msa0352050:intron | 35.0% |
| TAGAAGTCCAAACTCAATTG+GGG | - | chr3_1:19708524-19708543 | None:intergenic | 35.0% | |
| CATAGAAGTCCAAACTCAAT+TGG | - | chr3_1:19708526-19708545 | None:intergenic | 35.0% | |
| !!! | GGACTTCTATGCATTGATTT+TGG | + | chr3_1:19708535-19708554 | Msa0352050:intron | 35.0% |
| !!! | ATGCATTGATTTTGGGATGA+TGG | + | chr3_1:19708543-19708562 | Msa0352050:intron | 35.0% |
| TTACACATCCCTTTCCATAT+TGG | - | chr3_1:19708569-19708588 | None:intergenic | 35.0% | |
| GTAATACAAGAAAGAGAACC+TGG | + | chr3_1:19708585-19708604 | Msa0352050:intron | 35.0% | |
| ACAGGATTTAGAAATGTCGA+TGG | + | chr3_1:19708681-19708700 | Msa0352050:intron | 35.0% | |
| !! | AAATGTCGATGGTATTGACA+GGG | + | chr3_1:19708692-19708711 | Msa0352050:intron | 35.0% |
| TGATGCCATAAAAAATTCCC+AGG | + | chr3_1:19708736-19708755 | Msa0352050:intron | 35.0% | |
| GAATAGGATTCCCAACATTT+AGG | - | chr3_1:19708880-19708899 | None:intergenic | 35.0% | |
| AATGTTGGGAATCCTATTCT+TGG | + | chr3_1:19708881-19708900 | Msa0352050:intron | 35.0% | |
| ATGTTGGGAATCCTATTCTT+GGG | + | chr3_1:19708882-19708901 | Msa0352050:intron | 35.0% | |
| GTTAACATGTGTAACATTCC+CGG | + | chr3_1:19708933-19708952 | Msa0352050:intron | 35.0% | |
| TTAACATGTGTAACATTCCC+GGG | + | chr3_1:19708934-19708953 | Msa0352050:intron | 35.0% | |
| ATATTTCATTCCGATCTCAC+GGG | + | chr3_1:19708997-19709016 | Msa0352050:intron | 35.0% | |
| ! | TTATTTTCAAACGAGGGTTG+GGG | - | chr3_1:19709031-19709050 | None:intergenic | 35.0% |
| TAACTGCATTTACTTACAGG+AGG | + | chr3_1:19709177-19709196 | Msa0352050:intron | 35.0% | |
| TTAACCGATCAATAAATCCG+CGG | - | chr3_1:19709296-19709315 | None:intergenic | 35.0% | |
| TTTGTCTAACTTGATTGTGC+TGG | + | chr3_1:19709323-19709342 | Msa0352050:three_prime_UTR | 35.0% | |
| CGAAAAAGGGAATGTGTTGT+TGG | + | chr3_1:19704357-19704376 | Msa0352050:CDS | 40.0% | |
| GGCATTTGAGTCTTTATCTG+TGG | - | chr3_1:19704474-19704493 | None:intergenic | 40.0% | |
| TCTACCAACTTATTGGTACG+GGG | - | chr3_1:19704495-19704514 | None:intergenic | 40.0% | |
| TTTGCGCATCAGACAATGTT+CGG | - | chr3_1:19704524-19704543 | None:intergenic | 40.0% | |
| ! | TAGGATTTAGAGTAGGCGTT+AGG | + | chr3_1:19704655-19704674 | Msa0352050:CDS | 40.0% |
| !! | CTAGACCTTTGTTTGGCTTT+AGG | + | chr3_1:19704696-19704715 | Msa0352050:CDS | 40.0% |
| GCAAACCTAAAGCCAAACAA+AGG | - | chr3_1:19704704-19704723 | None:intergenic | 40.0% | |
| ! | GCTTTAGGTTTGCCTATTGT+AGG | + | chr3_1:19704711-19704730 | Msa0352050:CDS | 40.0% |
| GGTAAACACTCTCCTACAAT+AGG | - | chr3_1:19704726-19704745 | None:intergenic | 40.0% | |
| GTTTACCGGAAACTAGTGAT+AGG | + | chr3_1:19704739-19704758 | Msa0352050:CDS | 40.0% | |
| ! | CTAACCCTATCACTAGTTTC+CGG | - | chr3_1:19704747-19704766 | None:intergenic | 40.0% |
| AACAGCAACACCCCAATTAT+AGG | - | chr3_1:19704979-19704998 | None:intergenic | 40.0% | |
| GAACATTTATCCCTAACCAG+TGG | + | chr3_1:19705204-19705223 | Msa0352050:CDS | 40.0% | |
| ! | CTTAATTGGACCACTGGTTA+GGG | - | chr3_1:19705217-19705236 | None:intergenic | 40.0% |
| AAAACGCTTAATTGGACCAC+TGG | - | chr3_1:19705223-19705242 | None:intergenic | 40.0% | |
| ATGCGTGGAAAACGCTTAAT+TGG | - | chr3_1:19705231-19705250 | None:intergenic | 40.0% | |
| TTGGTCCAATTGTTAATGCG+TGG | - | chr3_1:19705246-19705265 | None:intergenic | 40.0% | |
| AACAATTGGACCAAAGTGGA+TGG | + | chr3_1:19705252-19705271 | Msa0352050:CDS | 40.0% | |
| ! | TGATTAGTTGGTTGAGGACT+TGG | + | chr3_1:19705406-19705425 | Msa0352050:intron | 40.0% |
| CTCCAATACCAACTTGAGAA+TGG | - | chr3_1:19705481-19705500 | None:intergenic | 40.0% | |
| TATGGCTGAACATCAAAGGT+TGG | + | chr3_1:19705535-19705554 | Msa0352050:CDS | 40.0% | |
| ! | ACACAAAGATTTGCTTTCCC+GGG | + | chr3_1:19705565-19705584 | Msa0352050:CDS | 40.0% |
| CAATCCTTGAGGATGATATG+AGG | + | chr3_1:19705591-19705610 | Msa0352050:CDS | 40.0% | |
| AAGCAAATAAGGTTGACGGT+AGG | + | chr3_1:19705621-19705640 | Msa0352050:CDS | 40.0% | |
| AGCAAATAAGGTTGACGGTA+GGG | + | chr3_1:19705622-19705641 | Msa0352050:CDS | 40.0% | |
| ! | TGATGAAGATGTTGGTGAAG+AGG | + | chr3_1:19705787-19705806 | Msa0352050:CDS | 40.0% |
| !! | GAAGGTTGATGATGAAGATG+TGG | + | chr3_1:19705844-19705863 | Msa0352050:CDS | 40.0% |
| TAAAGACAATGGGATGGAGT+TGG | + | chr3_1:19705895-19705914 | Msa0352050:CDS | 40.0% | |
| ! | GGAGTTGGATGATGATGATA+TGG | + | chr3_1:19705910-19705929 | Msa0352050:CDS | 40.0% |
| ! | GGAGTTTTTCCAATGCATGA+AGG | + | chr3_1:19706164-19706183 | Msa0352050:CDS | 40.0% |
| ! | GATTTAAAGGCACATCCTGA+AGG | + | chr3_1:19706497-19706516 | Msa0352050:CDS | 40.0% |
| TCAAGATGTATATGCCTCGT+TGG | + | chr3_1:19706549-19706568 | Msa0352050:CDS | 40.0% | |
| AAGAAAACAGGCAGTGATGA+AGG | - | chr3_1:19706742-19706761 | None:intergenic | 40.0% | |
| ! | CACTGCCTAAAGGGAATTTT+AGG | - | chr3_1:19706905-19706924 | None:intergenic | 40.0% |
| CTAAAATTCCCTTTAGGCAG+TGG | + | chr3_1:19706903-19706922 | Msa0352050:intron | 40.0% | |
| ! | TGTGTTGTATTAGTTCGGTG+GGG | + | chr3_1:19706957-19706976 | Msa0352050:intron | 40.0% |
| CATACATTGTCCTCTTCCTA+TGG | - | chr3_1:19707220-19707239 | None:intergenic | 40.0% | |
| ACAGTGAAAGAAATGCCTCA+AGG | + | chr3_1:19707255-19707274 | Msa0352050:CDS | 40.0% | |
| !!! | ACAGAAAGTCCGTTTTGAAG+GGG | + | chr3_1:19707383-19707402 | Msa0352050:intron | 40.0% |
| ATTCCACTACCCCTTCAAAA+CGG | - | chr3_1:19707395-19707414 | None:intergenic | 40.0% | |
| ! | ATCTTCTTTGGAGGTTGTAG+TGG | + | chr3_1:19707455-19707474 | Msa0352050:CDS | 40.0% |
| GCTGTATATTTAGGGAATGC+GGG | - | chr3_1:19707822-19707841 | None:intergenic | 40.0% | |
| GGCTGTATATTTAGGGAATG+CGG | - | chr3_1:19707823-19707842 | None:intergenic | 40.0% | |
| TATATGGGTGCGTTTGTTTG+AGG | + | chr3_1:19708086-19708105 | Msa0352050:intron | 40.0% | |
| AAATGGTTCCCAGGAATCTA+AGG | + | chr3_1:19708116-19708135 | Msa0352050:intron | 40.0% | |
| TCTTCCCATCTACCAAACAA+TGG | - | chr3_1:19708157-19708176 | None:intergenic | 40.0% | |
| !! | GAGGTGATAAGCATTGGTTA+AGG | - | chr3_1:19708331-19708350 | None:intergenic | 40.0% |
| !!! | TTTTGGGATGATGGCCAATA+TGG | + | chr3_1:19708552-19708571 | Msa0352050:intron | 40.0% |
| ! | GATGATGGCCAATATGGAAA+GGG | + | chr3_1:19708558-19708577 | Msa0352050:intron | 40.0% |
| ! | AATCCTTCCTGAGTTCTAGT+CGG | - | chr3_1:19708641-19708660 | None:intergenic | 40.0% |
| CTCAGGAAGGATTAGAGTTT+AGG | + | chr3_1:19708648-19708667 | Msa0352050:intron | 40.0% | |
| AGTTTAGGCTCTTCATCAAC+AGG | + | chr3_1:19708663-19708682 | Msa0352050:intron | 40.0% | |
| !! | GAAATGTCGATGGTATTGAC+AGG | + | chr3_1:19708691-19708710 | Msa0352050:intron | 40.0% |
| !! | AATGTCGATGGTATTGACAG+GGG | + | chr3_1:19708693-19708712 | Msa0352050:intron | 40.0% |
| ! | TTTAGGGTGCGTTTGTTTGA+GGG | - | chr3_1:19708863-19708882 | None:intergenic | 40.0% |
| ! | ATTTAGGGTGCGTTTGTTTG+AGG | - | chr3_1:19708864-19708883 | None:intergenic | 40.0% |
| AACAAACGCACCCTAAATGT+TGG | + | chr3_1:19708866-19708885 | Msa0352050:intron | 40.0% | |
| ACAAACGCACCCTAAATGTT+GGG | + | chr3_1:19708867-19708886 | Msa0352050:intron | 40.0% | |
| GGAAAAAATTCCCGTGAGAT+CGG | - | chr3_1:19709010-19709029 | None:intergenic | 40.0% | |
| ACTTACAGGAGGATATCCTT+CGG | + | chr3_1:19709188-19709207 | Msa0352050:intron | 40.0% | |
| CAGTGAAATTGTTTGTCGTC+TGG | + | chr3_1:19709216-19709235 | Msa0352050:CDS | 40.0% | |
| ATACCCGCGGATTTATTGAT+CGG | + | chr3_1:19709289-19709308 | Msa0352050:CDS | 40.0% | |
| TAACCGATCAATAAATCCGC+GGG | - | chr3_1:19709295-19709314 | None:intergenic | 40.0% | |
| AATGCCCCGTACCAATAAGT+TGG | + | chr3_1:19704488-19704507 | Msa0352050:CDS | 45.0% | |
| GAACATTGTCTGATGCGCAA+AGG | + | chr3_1:19704523-19704542 | Msa0352050:CDS | 45.0% | |
| AACTCCGTTCCGATATCTTG+TGG | + | chr3_1:19704560-19704579 | Msa0352050:CDS | 45.0% | |
| AAGCTGAAGGTCCTTCAAGA+AGG | + | chr3_1:19704825-19704844 | Msa0352050:CDS | 45.0% | |
| AGCTGAAGGTCCTTCAAGAA+GGG | + | chr3_1:19704826-19704845 | Msa0352050:CDS | 45.0% | |
| TCAATACCTGCAATACGGCT+GGG | - | chr3_1:19705088-19705107 | None:intergenic | 45.0% | |
| TTCAATACCTGCAATACGGC+TGG | - | chr3_1:19705089-19705108 | None:intergenic | 45.0% | |
| ! | GCTTAATTGGACCACTGGTT+AGG | - | chr3_1:19705218-19705237 | None:intergenic | 45.0% |
| AATTGGACCAAAGTGGATGG+AGG | + | chr3_1:19705255-19705274 | Msa0352050:CDS | 45.0% | |
| AACATGACCTCCATCCACTT+TGG | - | chr3_1:19705265-19705284 | None:intergenic | 45.0% | |
| GGTTCCAACACAACAAGACA+TGG | + | chr3_1:19705427-19705446 | Msa0352050:CDS | 45.0% | |
| GCCGTTAACCATTCTCAAGT+TGG | + | chr3_1:19705470-19705489 | Msa0352050:CDS | 45.0% | |
| ATCCTCAAGGATTGAAACCC+GGG | - | chr3_1:19705585-19705604 | None:intergenic | 45.0% | |
| CATCCTCAAGGATTGAAACC+CGG | - | chr3_1:19705586-19705605 | None:intergenic | 45.0% | |
| TATTCCGATGCCAAGTAGCA+TGG | + | chr3_1:19705649-19705668 | Msa0352050:CDS | 45.0% | |
| ! | ACTTCCATGCTACTTGGCAT+CGG | - | chr3_1:19705656-19705675 | None:intergenic | 45.0% |
| ATGCCAAGTAGCATGGAAGT+AGG | + | chr3_1:19705656-19705675 | Msa0352050:CDS | 45.0% | |
| CTTCCTACTTCCATGCTACT+TGG | - | chr3_1:19705662-19705681 | None:intergenic | 45.0% | |
| AGTAGCATGGAAGTAGGAAG+TGG | + | chr3_1:19705662-19705681 | Msa0352050:CDS | 45.0% | |
| GTAGCATGGAAGTAGGAAGT+GGG | + | chr3_1:19705663-19705682 | Msa0352050:CDS | 45.0% | |
| GGAAGTGGGTCAAAACATGT+AGG | + | chr3_1:19705677-19705696 | Msa0352050:CDS | 45.0% | |
| !! | TGATGGGTTGAAAAGTGAGG+CGG | + | chr3_1:19705730-19705749 | Msa0352050:CDS | 45.0% |
| CATGCATTGGAAAAACTCCC+CGG | - | chr3_1:19706163-19706182 | None:intergenic | 45.0% | |
| ! | TTTTCCAATGCATGAAGGCG+AGG | + | chr3_1:19706169-19706188 | Msa0352050:CDS | 45.0% |
| CATTGGAGTTTACGTCCTTC+AGG | - | chr3_1:19706515-19706534 | None:intergenic | 45.0% | |
| CTGAAGGACGTAAACTCCAA+TGG | + | chr3_1:19706513-19706532 | Msa0352050:CDS | 45.0% | |
| !! | GTAAACTCCAATGGACTGAG+CGG | + | chr3_1:19706522-19706541 | Msa0352050:CDS | 45.0% |
| TGAATTTCCGCTCAGTCCAT+TGG | - | chr3_1:19706532-19706551 | None:intergenic | 45.0% | |
| ! | TTCCCTTTAGGCAGTGGATT+TGG | + | chr3_1:19706909-19706928 | Msa0352050:intron | 45.0% |
| TGCCAAATCCACTGCCTAAA+GGG | - | chr3_1:19706914-19706933 | None:intergenic | 45.0% | |
| ATGCCAAATCCACTGCCTAA+AGG | - | chr3_1:19706915-19706934 | None:intergenic | 45.0% | |
| ! | GTGTTGTATTAGTTCGGTGG+GGG | + | chr3_1:19706958-19706977 | Msa0352050:intron | 45.0% |
| ! | TGTTGTATTAGTTCGGTGGG+GGG | + | chr3_1:19706959-19706978 | Msa0352050:intron | 45.0% |
| CATGTTACGTGTTGGACCAT+AGG | + | chr3_1:19707201-19707220 | Msa0352050:CDS | 45.0% | |
| GAAGAGGACAATGTATGTGC+TGG | + | chr3_1:19707223-19707242 | Msa0352050:CDS | 45.0% | |
| ATTATCCAAACGCTGCCTTG+AGG | - | chr3_1:19707273-19707292 | None:intergenic | 45.0% | |
| GCAGCGTTTGGATAATGCAA+TGG | + | chr3_1:19707277-19707296 | Msa0352050:CDS | 45.0% | |
| ! | TTCTTTGGAGGTTGTAGTGG+TGG | + | chr3_1:19707458-19707477 | Msa0352050:CDS | 45.0% |
| AAGTACTTGGAGTTGTGGGA+TGG | + | chr3_1:19707620-19707639 | Msa0352050:CDS | 45.0% | |
| TGTGGGATGGTGAAGCAAAA+TGG | + | chr3_1:19707633-19707652 | Msa0352050:CDS | 45.0% | |
| GTGGGATGGTGAAGCAAAAT+GGG | + | chr3_1:19707634-19707653 | Msa0352050:CDS | 45.0% | |
| TGGGATGGTGAAGCAAAATG+GGG | + | chr3_1:19707635-19707654 | Msa0352050:CDS | 45.0% | |
| GAGTATGCCCGACTATTCAT+TGG | + | chr3_1:19707664-19707683 | Msa0352050:CDS | 45.0% | |
| GTATATTTAGGGAATGCGGG+AGG | - | chr3_1:19707819-19707838 | None:intergenic | 45.0% | |
| !! | GCATTGGTTAAGGGCAGAAT+TGG | - | chr3_1:19708321-19708340 | None:intergenic | 45.0% |
| ! | GGATGATGGCCAATATGGAA+AGG | + | chr3_1:19708557-19708576 | Msa0352050:intron | 45.0% |
| ! | AGAACCTGGTTTGTCTAGCA+GGG | + | chr3_1:19708599-19708618 | Msa0352050:intron | 45.0% |
| TAATCCCTGCTAGACAAACC+AGG | - | chr3_1:19708606-19708625 | None:intergenic | 45.0% | |
| ACACTCCTACAACTAAGTCC+CGG | - | chr3_1:19708955-19708974 | None:intergenic | 45.0% | |
| CAATTTCACTGCGAATCCGA+AGG | - | chr3_1:19709207-19709226 | None:intergenic | 45.0% | |
| AGATACTGCAAAGATACCCG+CGG | + | chr3_1:19709276-19709295 | Msa0352050:CDS | 45.0% | |
| !!! | TAAATTTTATCATTAAAATT+AGG | + | chr3_1:19707145-19707164 | Msa0352050:intron | 5.0% |
| !! | AAATTTAAAAATTTCAAATT+AGG | - | chr3_1:19707570-19707589 | None:intergenic | 5.0% |
| AGGTGGGATGCAAGTAGCTT+AGG | + | chr3_1:19704636-19704655 | Msa0352050:CDS | 50.0% | |
| TAGAGTAGGCGTTAGGACTG+TGG | + | chr3_1:19704662-19704681 | Msa0352050:CDS | 50.0% | |
| GCTGAAGGTCCTTCAAGAAG+GGG | + | chr3_1:19704827-19704846 | Msa0352050:CDS | 50.0% | |
| CTACGTTGTCCCCTTCTTGA+AGG | - | chr3_1:19704839-19704858 | None:intergenic | 50.0% | |
| TTCCCGGGTTTCAATCCTTG+AGG | + | chr3_1:19705580-19705599 | Msa0352050:CDS | 50.0% | |
| !! | GATGGGTTGAAAAGTGAGGC+GGG | + | chr3_1:19705731-19705750 | Msa0352050:CDS | 50.0% |
| GTAGATGAGTTGCGTGTTGC+CGG | + | chr3_1:19706141-19706160 | Msa0352050:CDS | 50.0% | |
| TAGATGAGTTGCGTGTTGCC+GGG | + | chr3_1:19706142-19706161 | Msa0352050:CDS | 50.0% | |
| ACTTCCTCGCCTTCATGCAT+TGG | - | chr3_1:19706176-19706195 | None:intergenic | 50.0% | |
| AATGCATGAAGGCGAGGAAG+TGG | + | chr3_1:19706175-19706194 | Msa0352050:CDS | 50.0% | |
| ATGCATGAAGGCGAGGAAGT+GGG | + | chr3_1:19706176-19706195 | Msa0352050:CDS | 50.0% | |
| TCAAGTGTCTTGGTCCAACG+AGG | - | chr3_1:19706566-19706585 | None:intergenic | 50.0% | |
| TCGTTGGACCAAGACACTTG+AGG | + | chr3_1:19706565-19706584 | Msa0352050:CDS | 50.0% | |
| ! | AGGCAGTGGATTTGGCATTG+TGG | + | chr3_1:19706917-19706936 | Msa0352050:intron | 50.0% |
| GCGGGGTTTACGCTTATGTT+TGG | + | chr3_1:19706994-19707013 | Msa0352050:intron | 50.0% | |
| TATTAGGCAGAGTCGTCGCA+AGG | - | chr3_1:19707059-19707078 | None:intergenic | 50.0% | |
| TGTCCAGTGGTCTTCGAACT+GGG | - | chr3_1:19707183-19707202 | None:intergenic | 50.0% | |
| ATGTCCAGTGGTCTTCGAAC+TGG | - | chr3_1:19707184-19707203 | None:intergenic | 50.0% | |
| CCAACACGTAACATGTCCAG+TGG | - | chr3_1:19707196-19707215 | None:intergenic | 50.0% | |
| CCACTGGACATGTTACGTGT+TGG | + | chr3_1:19707193-19707212 | Msa0352050:CDS | 50.0% | |
| ACGTGTTGGACCATAGGAAG+AGG | + | chr3_1:19707207-19707226 | Msa0352050:CDS | 50.0% | |
| AAATGCCTCAAGGCAGCGTT+TGG | + | chr3_1:19707265-19707284 | Msa0352050:CDS | 50.0% | |
| !!! | AGTCCGTTTTGAAGGGGTAG+TGG | + | chr3_1:19707389-19707408 | Msa0352050:CDS | 50.0% |
| GGGATGGTGAAGCAAAATGG+GGG | + | chr3_1:19707636-19707655 | Msa0352050:CDS | 50.0% | |
| !! | GGAGGAGTGTGCCGTATTTT+TGG | + | chr3_1:19708002-19708021 | Msa0352050:intron | 50.0% |
| ! | GGTTCCCAGGAATCTAAGGT+TGG | + | chr3_1:19708120-19708139 | Msa0352050:intron | 50.0% |
| GCAAAACGTGGGTCAAACGT+CGG | - | chr3_1:19708235-19708254 | None:intergenic | 50.0% | |
| ! | GAGAACCTGGTTTGTCTAGC+AGG | + | chr3_1:19708598-19708617 | Msa0352050:intron | 50.0% |
| ! | ATCCACACCGACTAGAACTC+AGG | + | chr3_1:19708631-19708650 | Msa0352050:intron | 50.0% |
| ! | TTCCTGAGTTCTAGTCGGTG+TGG | - | chr3_1:19708636-19708655 | None:intergenic | 50.0% |
| ! | ACACCGACTAGAACTCAGGA+AGG | + | chr3_1:19708635-19708654 | Msa0352050:intron | 50.0% |
| TTCCTGGGAAAGCTAATCCC+AGG | + | chr3_1:19708823-19708842 | Msa0352050:intron | 50.0% | |
| !! | TACCTGGGATTAGCTTTCCC+AGG | - | chr3_1:19708828-19708847 | None:intergenic | 50.0% |
| CATTCCCGGGACTTAGTTGT+AGG | + | chr3_1:19708947-19708966 | Msa0352050:intron | 50.0% | |
| CACTCCTACAACTAAGTCCC+GGG | - | chr3_1:19708954-19708973 | None:intergenic | 50.0% | |
| GGGACTTAGTTGTAGGAGTG+TGG | + | chr3_1:19708954-19708973 | Msa0352050:intron | 50.0% | |
| AGATGAGTTGCGTGTTGCCG+GGG | + | chr3_1:19706143-19706162 | Msa0352050:CDS | 55.0% | |
| !! | CCAAGACACTTGAGGCGTTG+CGG | + | chr3_1:19706573-19706592 | Msa0352050:CDS | 55.0% |
| ! | GTATTAGTTCGGTGGGGGGT+TGG | + | chr3_1:19706963-19706982 | Msa0352050:intron | 55.0% |
| !!! | TGGGGGGTTGGTTTTGTGTG+CGG | + | chr3_1:19706975-19706994 | Msa0352050:intron | 55.0% |
| CAGTGGTCTTCGAACTGGGT+TGG | - | chr3_1:19707179-19707198 | None:intergenic | 55.0% | |
| CAACCCAGTTCGAAGACCAC+TGG | + | chr3_1:19707177-19707196 | Msa0352050:CDS | 55.0% | |
| TGGTTGCCCAGCCGTATTGC+AGG | + | chr3_1:19705079-19705098 | Msa0352050:CDS | 60.0% | |
| CCGCAACGCCTCAAGTGTCT+TGG | - | chr3_1:19706576-19706595 | None:intergenic | 60.0% | |
| !!! | GGGGGGTTGGTTTTGTGTGC+GGG | + | chr3_1:19706976-19706995 | Msa0352050:intron | 60.0% |
| !!! | GGGGGTTGGTTTTGTGTGCG+GGG | + | chr3_1:19706977-19706996 | Msa0352050:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 19704342 | 19709556 | 19704342 | ID=Msa0352050;Name=Msa0352050 |
| chr3_1 | mRNA | 19704342 | 19709556 | 19704342 | ID=Msa0352050-mRNA-1;Parent=Msa0352050;Name=Msa0352050-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.8|0.63|1|1|1|11|241|718 |
| chr3_1 | exon | 19704342 | 19704380 | 19704342 | ID=Msa0352050-mRNA-1:exon:4621;Parent=Msa0352050-mRNA-1 |
| chr3_1 | exon | 19704471 | 19705100 | 19704471 | ID=Msa0352050-mRNA-1:exon:4622;Parent=Msa0352050-mRNA-1 |
| chr3_1 | exon | 19705192 | 19705314 | 19705192 | ID=Msa0352050-mRNA-1:exon:4623;Parent=Msa0352050-mRNA-1 |
| chr3_1 | exon | 19705413 | 19706020 | 19705413 | ID=Msa0352050-mRNA-1:exon:4624;Parent=Msa0352050-mRNA-1 |
| chr3_1 | exon | 19706128 | 19706209 | 19706128 | ID=Msa0352050-mRNA-1:exon:4625;Parent=Msa0352050-mRNA-1 |
| chr3_1 | exon | 19706303 | 19706392 | 19706303 | ID=Msa0352050-mRNA-1:exon:4626;Parent=Msa0352050-mRNA-1 |
| chr3_1 | exon | 19706482 | 19706607 | 19706482 | ID=Msa0352050-mRNA-1:exon:4627;Parent=Msa0352050-mRNA-1 |
| chr3_1 | exon | 19707167 | 19707298 | 19707167 | ID=Msa0352050-mRNA-1:exon:4628;Parent=Msa0352050-mRNA-1 |
| chr3_1 | exon | 19707387 | 19707502 | 19707387 | ID=Msa0352050-mRNA-1:exon:4629;Parent=Msa0352050-mRNA-1 |
| chr3_1 | exon | 19707595 | 19707685 | 19707595 | ID=Msa0352050-mRNA-1:exon:4630;Parent=Msa0352050-mRNA-1 |
| chr3_1 | exon | 19709196 | 19709556 | 19709196 | ID=Msa0352050-mRNA-1:exon:4631;Parent=Msa0352050-mRNA-1 |
| chr3_1 | CDS | 19704342 | 19704380 | 19704342 | ID=Msa0352050-mRNA-1:cds;Parent=Msa0352050-mRNA-1 |
| chr3_1 | CDS | 19704471 | 19705100 | 19704471 | ID=Msa0352050-mRNA-1:cds;Parent=Msa0352050-mRNA-1 |
| chr3_1 | CDS | 19705192 | 19705314 | 19705192 | ID=Msa0352050-mRNA-1:cds;Parent=Msa0352050-mRNA-1 |
| chr3_1 | CDS | 19705413 | 19706020 | 19705413 | ID=Msa0352050-mRNA-1:cds;Parent=Msa0352050-mRNA-1 |
| chr3_1 | CDS | 19706128 | 19706209 | 19706128 | ID=Msa0352050-mRNA-1:cds;Parent=Msa0352050-mRNA-1 |
| chr3_1 | CDS | 19706303 | 19706392 | 19706303 | ID=Msa0352050-mRNA-1:cds;Parent=Msa0352050-mRNA-1 |
| chr3_1 | CDS | 19706482 | 19706607 | 19706482 | ID=Msa0352050-mRNA-1:cds;Parent=Msa0352050-mRNA-1 |
| chr3_1 | CDS | 19707167 | 19707298 | 19707167 | ID=Msa0352050-mRNA-1:cds;Parent=Msa0352050-mRNA-1 |
| chr3_1 | CDS | 19707387 | 19707502 | 19707387 | ID=Msa0352050-mRNA-1:cds;Parent=Msa0352050-mRNA-1 |
| chr3_1 | CDS | 19707595 | 19707685 | 19707595 | ID=Msa0352050-mRNA-1:cds;Parent=Msa0352050-mRNA-1 |
| chr3_1 | CDS | 19709196 | 19709315 | 19709196 | ID=Msa0352050-mRNA-1:cds;Parent=Msa0352050-mRNA-1 |
| chr3_1 | three_prime_UTR | 19709316 | 19709556 | 19709316 | ID=Msa0352050-mRNA-1:three_prime_utr;Parent=Msa0352050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
