Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152810 | XP_003623305.1 | 99.492 | 394 | 2 | 0 | 1 | 394 | 1 | 394 | 0.0 | 802 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152810 | sp|M1CZC0|EBP1_SOLTU | 87.597 | 387 | 47 | 1 | 1 | 386 | 1 | 387 | 0.0 | 676 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152810 | G7KSA2 | 99.492 | 394 | 2 | 0 | 1 | 394 | 1 | 394 | 0.0 | 802 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0705800 | Msa1152810 | 0.806327 | 8.681159e-50 | -8.615850e-47 |
| Msa1042780 | Msa1152810 | 0.800868 | 1.177588e-48 | -8.615850e-47 |
| Msa1058700 | Msa1152810 | 0.853103 | 2.980517e-61 | -8.615850e-47 |
| Msa1152810 | Msa1167550 | 0.843257 | 1.566217e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152810 | MtrunA17_Chr7g0242891 | 99.492 | 394 | 2 | 0 | 1 | 394 | 1 | 394 | 0.0 | 802 |
| Msa1152810 | MtrunA17_Chr2g0316491 | 86.294 | 394 | 49 | 1 | 1 | 394 | 1 | 389 | 0.0 | 675 |
| Msa1152810 | MtrunA17_Chr1g0206751 | 25.602 | 332 | 213 | 8 | 7 | 323 | 20 | 332 | 1.48e-29 | 117 |
| Msa1152810 | MtrunA17_Chr4g0061151 | 25.602 | 332 | 213 | 8 | 7 | 323 | 101 | 413 | 3.84e-29 | 117 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1152810 | AT3G51800.3 | 77.635 | 389 | 79 | 2 | 2 | 390 | 3 | 383 | 0.0 | 604 |
| Msa1152810 | AT3G51800.1 | 78.663 | 389 | 82 | 1 | 2 | 390 | 3 | 390 | 0.0 | 593 |
| Msa1152810 | AT3G51800.2 | 76.884 | 398 | 82 | 2 | 2 | 390 | 3 | 399 | 0.0 | 585 |
| Msa1152810 | AT2G44180.1 | 25.225 | 333 | 213 | 9 | 7 | 323 | 117 | 429 | 6.42e-29 | 117 |
| Msa1152810 | AT3G59990.4 | 25.904 | 332 | 212 | 8 | 7 | 323 | 115 | 427 | 6.85e-29 | 117 |
| Msa1152810 | AT3G59990.3 | 25.904 | 332 | 212 | 8 | 7 | 323 | 115 | 427 | 6.85e-29 | 117 |
| Msa1152810 | AT3G59990.1 | 25.904 | 332 | 212 | 8 | 7 | 323 | 115 | 427 | 6.85e-29 | 117 |
| Msa1152810 | AT3G59990.2 | 25.904 | 332 | 212 | 8 | 7 | 323 | 115 | 427 | 6.85e-29 | 117 |
| Msa1152810 | AT2G44180.2 | 25.466 | 322 | 204 | 9 | 18 | 323 | 8 | 309 | 7.88e-28 | 112 |
Find 105 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCCTTGCAGCCTAAGTTAT+TGG | 0.168042 | 7_4:+38753573 | Msa1152810:intron |
| TCTGACACCCCTTTCAGTTT+TGG | 0.255511 | 7_4:+38754517 | Msa1152810:three_prime_UTR |
| GGCTTTGAAGTTAGTTATTT+CGG | 0.260686 | 7_4:+38750461 | Msa1152810:CDS |
| AGGGTTTGTGAAGTGAAATT+AGG | 0.262873 | 7_4:-38749755 | None:intergenic |
| ACCAAAATTCATATCCAAAA+AGG | 0.288538 | 7_4:-38754561 | None:intergenic |
| TTCAATGAAGAGGCAAGTTT+TGG | 0.308116 | 7_4:-38749730 | None:intergenic |
| CTTCAGGAAGGTCCGGTTAC+TGG | 0.308248 | 7_4:+38751157 | Msa1152810:CDS |
| CAATTGATTACCTTCTTTCC+TGG | 0.318576 | 7_4:-38751244 | None:intergenic |
| TTTCAATGGTTGCAGTGATT+TGG | 0.324960 | 7_4:+38751087 | Msa1152810:intron |
| AATGAAGAGTAAGGAAGAAA+TGG | 0.327536 | 7_4:-38749826 | None:intergenic |
| GATTTGGCTTGTCATATAGA+TGG | 0.329871 | 7_4:+38751103 | Msa1152810:CDS |
| GGCTCACACTCATGTTCTTC+AGG | 0.336230 | 7_4:+38751141 | Msa1152810:CDS |
| GGGTTTGTGAAGTGAAATTA+GGG | 0.343381 | 7_4:-38749754 | None:intergenic |
| TAGAGTTACCTAGCAGAAAA+TGG | 0.347063 | 7_4:-38753706 | None:intergenic |
| CTAGCAGAAAATGGCATGAT+TGG | 0.364270 | 7_4:-38753697 | None:intergenic |
| ACACTCTGATTACAGGGCTT+TGG | 0.375645 | 7_4:+38753796 | Msa1152810:intron |
| AATTAAGTTCAACTATTGTA+TGG | 0.382802 | 7_4:-38754701 | None:intergenic |
| AAGAGCTCGCCTTGGTTTAG+TGG | 0.392978 | 7_4:+38753826 | Msa1152810:CDS |
| TCCTGGCCTTACAAGCCTTA+AGG | 0.393010 | 7_4:-38751227 | None:intergenic |
| GCCTCATTTGTTGAGTCCAC+TGG | 0.400790 | 7_4:-38754426 | None:intergenic |
| GTTGTCGACATTTGCGAGAA+AGG | 0.407425 | 7_4:+38750504 | Msa1152810:CDS |
| TCTGCTGCCCGTCCAGTAAC+CGG | 0.409183 | 7_4:-38751169 | None:intergenic |
| AAAACAGAAATTGTTATGCT+TGG | 0.409269 | 7_4:+38754638 | Msa1152810:three_prime_UTR |
| TTGTATTTGGTTACAACATC+AGG | 0.409580 | 7_4:-38750034 | None:intergenic |
| ATGTCGACAACCTTGACCTT+TGG | 0.417362 | 7_4:-38750492 | None:intergenic |
| CTCTGATTACAGGGCTTTGG+AGG | 0.417363 | 7_4:+38753799 | Msa1152810:intron |
| CTTCTTTGTCTTTGTGCCCA+AGG | 0.418183 | 7_4:-38754127 | None:intergenic |
| TTGAAGCAGTTTGTGATTGA+CGG | 0.419108 | 7_4:+38753366 | Msa1152810:CDS |
| AGGTTGCCTTAAGGCTTGTA+AGG | 0.421762 | 7_4:+38751221 | Msa1152810:CDS |
| TGTGTTGTTAACAGAAATAC+AGG | 0.425225 | 7_4:-38750924 | None:intergenic |
| AGCAGACAACTATTTATAAG+AGG | 0.448471 | 7_4:+38753602 | Msa1152810:CDS |
| GGTTGATGATGCAGAGTTTG+AGG | 0.452257 | 7_4:+38753428 | Msa1152810:CDS |
| ACGGTCTTGTTAATGCCAAA+TGG | 0.460902 | 7_4:+38754021 | Msa1152810:CDS |
| GGCTAGCCATGCCTTGATCT+CGG | 0.460904 | 7_4:-38754106 | None:intergenic |
| CAATCACAAACTGCTTCAAT+TGG | 0.462473 | 7_4:-38753362 | None:intergenic |
| GCATCATCAACCCTTGTATC+CGG | 0.463945 | 7_4:-38753417 | None:intergenic |
| ATTGATATAGTGACAAGTAC+TGG | 0.464133 | 7_4:+38753468 | Msa1152810:CDS |
| TGTACTTAGTATCTCTAATC+CGG | 0.469904 | 7_4:+38753398 | Msa1152810:CDS |
| GTATCTCTAATCCGGATACA+AGG | 0.471369 | 7_4:+38753406 | Msa1152810:CDS |
| CTGCTGCTGAGGTTGCCTTA+AGG | 0.471559 | 7_4:+38751212 | Msa1152810:CDS |
| ATGAAGAGTAAGGAAGAAAT+GGG | 0.473147 | 7_4:-38749825 | None:intergenic |
| GCTAGCCATGCCTTGATCTC+GGG | 0.479085 | 7_4:-38754105 | None:intergenic |
| TGTTGCACACATCAAATTCA+CGG | 0.479497 | 7_4:+38754002 | Msa1152810:CDS |
| TCACAAACTGCTTCAATTGG+TGG | 0.483001 | 7_4:-38753359 | None:intergenic |
| TGAAAGGGAGGAGAAGGAGT+TGG | 0.485440 | 7_4:+38750000 | Msa1152810:CDS |
| GATCAAGGCATGGCTAGCCT+TGG | 0.487132 | 7_4:+38754110 | Msa1152810:CDS |
| GCCTTAAGGCTTGTAAGGCC+AGG | 0.487319 | 7_4:+38751226 | Msa1152810:CDS |
| AACAAATGAGGCCACATCTC+AGG | 0.488049 | 7_4:+38754437 | Msa1152810:CDS |
| ATTTGGCTTGTCATATAGAT+GGG | 0.489793 | 7_4:+38751104 | Msa1152810:CDS |
| GGATGATGAAAGGGAGGAGA+AGG | 0.490206 | 7_4:+38749994 | Msa1152810:CDS |
| GTGACGCGGTCCGATCCATT+TGG | 0.494501 | 7_4:-38754036 | None:intergenic |
| GGAAGGTCCGGTTACTGGAC+GGG | 0.495529 | 7_4:+38751162 | Msa1152810:CDS |
| TCATGTTCTTCAGGAAGGTC+CGG | 0.498470 | 7_4:+38751150 | Msa1152810:CDS |
| TGTATCTGATGCAATTCAAA+AGG | 0.498979 | 7_4:+38753293 | Msa1152810:CDS |
| GCTTGTAAGGCCAGGAAAGA+AGG | 0.499294 | 7_4:+38751234 | Msa1152810:CDS |
| GATAGATGATCCCGAGATCA+AGG | 0.503858 | 7_4:+38754095 | Msa1152810:CDS |
| ATCAAGGCATGGCTAGCCTT+GGG | 0.514968 | 7_4:+38754111 | Msa1152810:CDS |
| CACCATGTCGGATGATGAAA+GGG | 0.519119 | 7_4:+38749985 | Msa1152810:exon |
| CCTGTTCTGCATGAAAAGCC+TGG | 0.520705 | 7_4:+38753881 | Msa1152810:CDS |
| CACTGGCTAGAGGAGAGAAA+TGG | 0.524226 | 7_4:-38750952 | None:intergenic |
| AGCTGCAAACACTGCTGCTG+AGG | 0.524555 | 7_4:+38751201 | Msa1152810:CDS |
| ACAATGTACCAAAACTGAAA+GGG | 0.525017 | 7_4:-38754525 | None:intergenic |
| GATGAGACAGTGTTGGAAGA+AGG | 0.526469 | 7_4:+38750974 | Msa1152810:CDS |
| GACAGCAGAAGCTGAGCCAG+TGG | 0.530153 | 7_4:+38754410 | Msa1152810:CDS |
| GCACCATGTCGGATGATGAA+AGG | 0.530984 | 7_4:+38749984 | Msa1152810:exon |
| GTCAATTCATTCCTGAGATG+TGG | 0.541149 | 7_4:-38754448 | None:intergenic |
| CTCCCTTTCATCATCCGACA+TGG | 0.542242 | 7_4:-38749987 | None:intergenic |
| AACAATGTACCAAAACTGAA+AGG | 0.547449 | 7_4:-38754526 | None:intergenic |
| TTCCAACACTGTCTCATCAC+TGG | 0.549888 | 7_4:-38750969 | None:intergenic |
| TGTTAACAGAAATACAGGTC+GGG | 0.556626 | 7_4:-38750919 | None:intergenic |
| GACAAGTACTGGAGAAGGCA+AGG | 0.561868 | 7_4:+38753479 | Msa1152810:CDS |
| GTGAAGAAGAAGATAGAGAG+AGG | 0.562003 | 7_4:+38750887 | Msa1152810:CDS |
| GTGGGCTGCAATTCTTGGAG+TGG | 0.565750 | 7_4:-38754066 | None:intergenic |
| AAATTAGGGTTTCAATGAAG+AGG | 0.568419 | 7_4:-38749740 | None:intergenic |
| CACACTCATGTTCTTCAGGA+AGG | 0.570548 | 7_4:+38751145 | Msa1152810:CDS |
| AGATGGGTTCATTGCTGCTG+TGG | 0.571546 | 7_4:+38751120 | Msa1152810:CDS |
| GAGGAGAAAAGAGCTCGCCT+TGG | 0.572936 | 7_4:+38753818 | Msa1152810:CDS |
| GTTTGTGATTGACGGTAACA+AGG | 0.574284 | 7_4:+38753374 | Msa1152810:CDS |
| AGCCAGTGATGAGACAGTGT+TGG | 0.577721 | 7_4:+38750967 | Msa1152810:CDS |
| CTTGTTAATGCCAAATGGAT+CGG | 0.579184 | 7_4:+38754026 | Msa1152810:CDS |
| TGCCTATGATTGTAAAATTG+TGG | 0.582084 | 7_4:+38753323 | Msa1152810:CDS |
| GGCACAAAGACAAAGAAGAA+AGG | 0.585592 | 7_4:+38754132 | Msa1152810:CDS |
| GGAATGTAAACCAAAGGTCA+AGG | 0.586955 | 7_4:+38750482 | Msa1152810:CDS |
| AGGAAGGTCCGGTTACTGGA+CGG | 0.589047 | 7_4:+38751161 | Msa1152810:CDS |
| GCAGACAACTATTTATAAGA+GGG | 0.589806 | 7_4:+38753603 | Msa1152810:CDS |
| GCCAGTGGACTCAACAAATG+AGG | 0.599556 | 7_4:+38754425 | Msa1152810:CDS |
| AAGACAAAGAAGAAAGGTGG+CGG | 0.600977 | 7_4:+38754138 | Msa1152810:CDS |
| ATAGTGACAAGTACTGGAGA+AGG | 0.607460 | 7_4:+38753474 | Msa1152810:CDS |
| TTGTTAACAGAAATACAGGT+CGG | 0.613871 | 7_4:-38750920 | None:intergenic |
| TTCAGGTAAGAAAGAGGACA+AGG | 0.622867 | 7_4:+38754380 | Msa1152810:intron |
| CAATGTACCAAAACTGAAAG+GGG | 0.625114 | 7_4:-38754524 | None:intergenic |
| ACTTGAAGATGAAAGCATCT+CGG | 0.634545 | 7_4:+38753644 | Msa1152810:CDS |
| TATCTCTAATCCGGATACAA+GGG | 0.635855 | 7_4:+38753407 | Msa1152810:CDS |
| TGCTTCTCATCCAATAACTT+AGG | 0.637623 | 7_4:-38753583 | None:intergenic |
| TATTTCGGAATGTAAACCAA+AGG | 0.637636 | 7_4:+38750476 | Msa1152810:CDS |
| CATCAAGGATTGAACGAGTG+AGG | 0.643849 | 7_4:+38749962 | Msa1152810:five_prime_UTR |
| ACAAAGACAAAGAAGAAAGG+TGG | 0.644797 | 7_4:+38754135 | Msa1152810:CDS |
| CTATGATTGTAAAATTGTGG+AGG | 0.650809 | 7_4:+38753326 | Msa1152810:CDS |
| ACTGTCTCATCACTGGCTAG+AGG | 0.660835 | 7_4:-38750962 | None:intergenic |
| CATGTCGGATGATGAAAGGG+AGG | 0.672723 | 7_4:+38749988 | Msa1152810:exon |
| TATGATTGTAAAATTGTGGA+GGG | 0.685880 | 7_4:+38753327 | Msa1152810:CDS |
| ATGATCCCGAGATCAAGGCA+TGG | 0.688022 | 7_4:+38754100 | Msa1152810:CDS |
| GAACGAGTGAGGCACCATGT+CGG | 0.693904 | 7_4:+38749973 | Msa1152810:exon |
| TCATACATTCCACTAAACCA+AGG | 0.697995 | 7_4:-38753835 | None:intergenic |
| GGAGTGGATGAGATGTGACG+CGG | 0.801724 | 7_4:-38754050 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTATTTTCATATTCTATA+TGG | + | chr7_4:38750104-38750123 | Msa1152810:intron | 10.0% |
| !!! | TTTATTTTCATATTCTATAT+GGG | + | chr7_4:38750105-38750124 | Msa1152810:intron | 10.0% |
| !!! | TTGTTAATTTTACTTATTTT+TGG | + | chr7_4:38750229-38750248 | Msa1152810:intron | 10.0% |
| !! | AATATAATACATATAAATGA+GGG | - | chr7_4:38751280-38751299 | None:intergenic | 10.0% |
| !! | AATTAATATTGAAAAATGAA+GGG | - | chr7_4:38752038-38752057 | None:intergenic | 10.0% |
| !! | TAATTAATATTGAAAAATGA+AGG | - | chr7_4:38752039-38752058 | None:intergenic | 10.0% |
| !! | TTAAAAAAAAGAAAATATGT+TGG | - | chr7_4:38752265-38752284 | None:intergenic | 10.0% |
| !! | ATATCATAAAACATTAATAT+TGG | + | chr7_4:38753000-38753019 | Msa1152810:intron | 10.0% |
| !!! | AAATAAAATTTTTCCCAATT+GGG | - | chr7_4:38749900-38749919 | None:intergenic | 15.0% |
| !!! | AAAATAAAATTTTTCCCAAT+TGG | - | chr7_4:38749901-38749920 | None:intergenic | 15.0% |
| !!! | TTTTGTTTGAATTTTTCATT+TGG | + | chr7_4:38749927-38749946 | Msa1152810:intron | 15.0% |
| !!! | TTTGTTTGAATTTTTCATTT+GGG | + | chr7_4:38749928-38749947 | Msa1152810:intron | 15.0% |
| !!! | GTTTTTGTTAATTCATAAAT+TGG | + | chr7_4:38750127-38750146 | Msa1152810:intron | 15.0% |
| !!! | AAATTTATTGAATTTAGCTT+AGG | + | chr7_4:38750156-38750175 | Msa1152810:intron | 15.0% |
| !!! | TTTTGTTAATTTTCATTTCT+CGG | + | chr7_4:38750190-38750209 | Msa1152810:intron | 15.0% |
| !!! | TTACTTTTTACTTACTTTTT+TGG | + | chr7_4:38750420-38750439 | Msa1152810:intron | 15.0% |
| !! | ATATTTCTTTATACAATCAA+CGG | - | chr7_4:38750739-38750758 | None:intergenic | 15.0% |
| !! | GTATAAAGAAATATTGTATT+TGG | + | chr7_4:38750745-38750764 | Msa1152810:intron | 15.0% |
| !! | CAATATAATACATATAAATG+AGG | - | chr7_4:38751281-38751300 | None:intergenic | 15.0% |
| !! | TTTACTTTATAACATATTTG+TGG | + | chr7_4:38751831-38751850 | Msa1152810:intron | 15.0% |
| !! | ATATGATAAAACTGTAATAT+TGG | + | chr7_4:38752118-38752137 | Msa1152810:intron | 15.0% |
| !!! | TTTTATCATATATAAGTATC+AGG | - | chr7_4:38752546-38752565 | None:intergenic | 15.0% |
| !! | ATATGATAAAACTGTAATAT+TGG | + | chr7_4:38752118-38752137 | Msa1152810:intron | 15.0% |
| !! | TATTAGTTCAATAATTCATA+TGG | - | chr7_4:38753546-38753565 | None:intergenic | 15.0% |
| !!! | ATGAAAAACATTTCTTTTTT+GGG | - | chr7_4:38754489-38754508 | None:intergenic | 15.0% |
| !!! | AATGAAAAACATTTCTTTTT+TGG | - | chr7_4:38754490-38754509 | None:intergenic | 15.0% |
| !! | AAAAATGAAAATGAAGAGTA+AGG | - | chr7_4:38749838-38749857 | None:intergenic | 20.0% |
| !!! | TTTTATTTGCGAATTTGAAA+TGG | + | chr7_4:38750268-38750287 | Msa1152810:intron | 20.0% |
| !!! | TTTATTTGCGAATTTGAAAT+GGG | + | chr7_4:38750269-38750288 | Msa1152810:intron | 20.0% |
| !!! | TAAATTTCTCGATTAGTTTA+AGG | + | chr7_4:38750351-38750370 | Msa1152810:intron | 20.0% |
| !!! | CTTATGATGTTTTCTTTTAT+TGG | + | chr7_4:38750832-38750851 | Msa1152810:intron | 20.0% |
| !! | TACAATTTCAATCAAAAAAG+AGG | - | chr7_4:38751699-38751718 | None:intergenic | 20.0% |
| !!! | TTTTATCATATGTAAGTATC+AGG | - | chr7_4:38752109-38752128 | None:intergenic | 20.0% |
| !! | TCAATAAAAAACACAAACAA+AGG | - | chr7_4:38752466-38752485 | None:intergenic | 20.0% |
| !!! | TTCACTAAATTATACCTTTT+TGG | + | chr7_4:38754547-38754566 | Msa1152810:three_prime_UTR | 20.0% |
| ! | GTATCAAAACAATGAAGAAT+TGG | - | chr7_4:38749878-38749897 | None:intergenic | 25.0% |
| !!! | ATTTTTCATTTGGGTTTTTC+AGG | + | chr7_4:38749937-38749956 | Msa1152810:intron | 25.0% |
| ! | ATTTCAATATTTAGCTGTGA+AGG | + | chr7_4:38750632-38750651 | Msa1152810:intron | 25.0% |
| ! | TGAAATTACAAGAAAGTAAC+TGG | - | chr7_4:38750679-38750698 | None:intergenic | 25.0% |
| ! | TAATGATGCATTTCTTTCAA+TGG | + | chr7_4:38751073-38751092 | Msa1152810:intron | 25.0% |
| ! | TTTAGAGATCAAAATTCACA+AGG | - | chr7_4:38751435-38751454 | None:intergenic | 25.0% |
| ! | TTTGTTCATTTCAGATTACT+TGG | + | chr7_4:38751628-38751647 | Msa1152810:intron | 25.0% |
| ! | GGTTGAATAAAATGTACAAA+AGG | - | chr7_4:38751667-38751686 | None:intergenic | 25.0% |
| !!! | AGCTTTATCTTTTGTCTATT+TGG | + | chr7_4:38752073-38752092 | Msa1152810:intron | 25.0% |
| !!! | TACGAAAGTTTTTGTTTTGA+AGG | - | chr7_4:38752310-38752329 | None:intergenic | 25.0% |
| !!! | GTAAATTTGATTTGATGAAC+TGG | + | chr7_4:38752327-38752346 | Msa1152810:intron | 25.0% |
| ! | CTATATGATGAATACATCAT+AGG | + | chr7_4:38752353-38752372 | Msa1152810:intron | 25.0% |
| ! | AGTGAGTATTTATGATACAA+AGG | - | chr7_4:38752441-38752460 | None:intergenic | 25.0% |
| !!! | CAATATGATTTTGATCACTT+CGG | - | chr7_4:38752589-38752608 | None:intergenic | 25.0% |
| !!! | GCTGTTTTGATTTATATTGT+CGG | + | chr7_4:38752661-38752680 | Msa1152810:intron | 25.0% |
| ! | GTAAAAAAACCAAGATATGT+TGG | - | chr7_4:38752705-38752724 | None:intergenic | 25.0% |
| ! | GTTTAAATATTGTACCATGT+TGG | - | chr7_4:38753147-38753166 | None:intergenic | 25.0% |
| ! | TATGATTGTAAAATTGTGGA+GGG | + | chr7_4:38753327-38753346 | Msa1152810:CDS | 25.0% |
| ! | AGTGGACATATAATCAAAAT+CGG | - | chr7_4:38753769-38753788 | None:intergenic | 25.0% |
| ! | TAAATACAAAAGCGAAATGA+TGG | - | chr7_4:38754247-38754266 | None:intergenic | 25.0% |
| ! | TGCATATGATGTAATACTAT+AGG | + | chr7_4:38754316-38754335 | Msa1152810:intron | 25.0% |
| !! | ACCTTTTTGGATATGAATTT+TGG | + | chr7_4:38754560-38754579 | Msa1152810:three_prime_UTR | 25.0% |
| ! | ACCAAAATTCATATCCAAAA+AGG | - | chr7_4:38754564-38754583 | None:intergenic | 25.0% |
| ! | AAAACAGAAATTGTTATGCT+TGG | + | chr7_4:38754638-38754657 | Msa1152810:three_prime_UTR | 25.0% |
| AAATTAGGGTTTCAATGAAG+AGG | - | chr7_4:38749743-38749762 | None:intergenic | 30.0% | |
| ATGAAGAGTAAGGAAGAAAT+GGG | - | chr7_4:38749828-38749847 | None:intergenic | 30.0% | |
| AATGAAGAGTAAGGAAGAAA+TGG | - | chr7_4:38749829-38749848 | None:intergenic | 30.0% | |
| !!! | TCATTGTTTTGATACCCAAT+TGG | + | chr7_4:38749883-38749902 | Msa1152810:intron | 30.0% |
| !!! | CATTGTTTTGATACCCAATT+GGG | + | chr7_4:38749884-38749903 | Msa1152810:intron | 30.0% |
| TTGTATTTGGTTACAACATC+AGG | - | chr7_4:38750037-38750056 | None:intergenic | 30.0% | |
| !! | TTCATTTCTCGGTTAGTTTA+AGG | + | chr7_4:38750201-38750220 | Msa1152810:intron | 30.0% |
| !! | GGCTTTGAAGTTAGTTATTT+CGG | + | chr7_4:38750461-38750480 | Msa1152810:CDS | 30.0% |
| TATTTCGGAATGTAAACCAA+AGG | + | chr7_4:38750476-38750495 | Msa1152810:CDS | 30.0% | |
| ACAATCAACGGTTATTATCA+TGG | - | chr7_4:38750727-38750746 | None:intergenic | 30.0% | |
| ! | GTTTTCTTTTATTGGTGTGA+AGG | + | chr7_4:38750840-38750859 | Msa1152810:intron | 30.0% |
| TTGTTAACAGAAATACAGGT+CGG | - | chr7_4:38750923-38750942 | None:intergenic | 30.0% | |
| ! | TGTGTTGTTAACAGAAATAC+AGG | - | chr7_4:38750927-38750946 | None:intergenic | 30.0% |
| !! | ATTTGGCTTGTCATATAGAT+GGG | + | chr7_4:38751104-38751123 | Msa1152810:CDS | 30.0% |
| ACTTATAACCTATCTACATG+TGG | - | chr7_4:38751337-38751356 | None:intergenic | 30.0% | |
| GTTATAAGTCAGTGTCAATA+TGG | + | chr7_4:38751348-38751367 | Msa1152810:intron | 30.0% | |
| ATGAAAACTAATCATGAGCT+AGG | + | chr7_4:38751457-38751476 | Msa1152810:intron | 30.0% | |
| TGTCATAGTTACACTTATAG+AGG | + | chr7_4:38751502-38751521 | Msa1152810:intron | 30.0% | |
| TCAAAAAAGAGGTGACATAT+CGG | - | chr7_4:38751688-38751707 | None:intergenic | 30.0% | |
| !!! | AAATAAGACAGTTTTGAGAG+AGG | - | chr7_4:38751806-38751825 | None:intergenic | 30.0% |
| !!! | CTCTCAAAACTGTCTTATTT+TGG | + | chr7_4:38751806-38751825 | Msa1152810:intron | 30.0% |
| AGTGTAACTATGACAAAAAC+AGG | - | chr7_4:38751923-38751942 | None:intergenic | 30.0% | |
| ! | TTTTGTCATAGTTACACTGA+TGG | + | chr7_4:38751925-38751944 | Msa1152810:intron | 30.0% |
| ATAAATACCCATATCCCTTT+GGG | + | chr7_4:38751970-38751989 | Msa1152810:intron | 30.0% | |
| AAATTGCTTGAAGTATGACA+AGG | - | chr7_4:38752010-38752029 | None:intergenic | 30.0% | |
| ATATGTAAGTATCAGGATTC+AGG | - | chr7_4:38752102-38752121 | None:intergenic | 30.0% | |
| !! | CAATATGATTTTGATCACCT+CGG | - | chr7_4:38752152-38752171 | None:intergenic | 30.0% |
| AGTGTAACTATGACATAAAC+AGG | - | chr7_4:38752401-38752420 | None:intergenic | 30.0% | |
| TTATGTCATAGTTACACTGA+TGG | + | chr7_4:38752403-38752422 | Msa1152810:intron | 30.0% | |
| AAATTGCTTGAAGTATGACA+AGG | - | chr7_4:38752010-38752029 | None:intergenic | 30.0% | |
| CGAAGTGATCAAAATCATAT+TGG | + | chr7_4:38752587-38752606 | Msa1152810:intron | 30.0% | |
| CTATATGATGAATACATCGT+AGG | + | chr7_4:38752763-38752782 | Msa1152810:intron | 30.0% | |
| AGTGTAACTATGACATAAAC+AGG | - | chr7_4:38752401-38752420 | None:intergenic | 30.0% | |
| AGTGGGTATTTATGAAACAA+AGG | - | chr7_4:38752851-38752870 | None:intergenic | 30.0% | |
| AAATAACTTGAAGCATGACA+AGG | - | chr7_4:38752899-38752918 | None:intergenic | 30.0% | |
| !! | ATTTTCTAGTATAGCCAACA+TGG | + | chr7_4:38752248-38752267 | Msa1152810:intron | 30.0% |
| AAATTTCCTGAGTTGTAGTA+GGG | + | chr7_4:38753229-38753248 | Msa1152810:intron | 30.0% | |
| ! | ATACTTTTCTTGACAGAACA+AGG | + | chr7_4:38753269-38753288 | Msa1152810:intron | 30.0% |
| TGTATCTGATGCAATTCAAA+AGG | + | chr7_4:38753293-38753312 | Msa1152810:CDS | 30.0% | |
| TGCCTATGATTGTAAAATTG+TGG | + | chr7_4:38753323-38753342 | Msa1152810:CDS | 30.0% | |
| ! | CTCCACAATTTTACAATCAT+AGG | - | chr7_4:38753328-38753347 | None:intergenic | 30.0% |
| CTATGATTGTAAAATTGTGG+AGG | + | chr7_4:38753326-38753345 | Msa1152810:CDS | 30.0% | |
| TGTACTTAGTATCTCTAATC+CGG | + | chr7_4:38753398-38753417 | Msa1152810:CDS | 30.0% | |
| ATTGATATAGTGACAAGTAC+TGG | + | chr7_4:38753468-38753487 | Msa1152810:CDS | 30.0% | |
| AGCAGACAACTATTTATAAG+AGG | + | chr7_4:38753602-38753621 | Msa1152810:CDS | 30.0% | |
| GCAGACAACTATTTATAAGA+GGG | + | chr7_4:38753603-38753622 | Msa1152810:CDS | 30.0% | |
| ! | ATGGCATGATTGGAAATTTT+TGG | - | chr7_4:38753690-38753709 | None:intergenic | 30.0% |
| AATCAGAGTGTAATTGTAAG+TGG | - | chr7_4:38753787-38753806 | None:intergenic | 30.0% | |
| TACAATTACACTCTGATTAC+AGG | + | chr7_4:38753789-38753808 | Msa1152810:intron | 30.0% | |
| ACAATTACACTCTGATTACA+GGG | + | chr7_4:38753790-38753809 | Msa1152810:intron | 30.0% | |
| ! | AAGCCTGGTAATTTTTCTAT+AGG | + | chr7_4:38753896-38753915 | Msa1152810:intron | 30.0% |
| TTGCCTATAGAAAAATTACC+AGG | - | chr7_4:38753902-38753921 | None:intergenic | 30.0% | |
| AACAGTATAGCAAGAAGTTT+AGG | - | chr7_4:38753965-38753984 | None:intergenic | 30.0% | |
| ! | CGAAATGATGGAACAAAAAT+AGG | - | chr7_4:38754235-38754254 | None:intergenic | 30.0% |
| ! | TTTTTGTTCAGGTAAGAAAG+AGG | + | chr7_4:38754374-38754393 | Msa1152810:intron | 30.0% |
| !!! | CATTTCTTTTTTGGGATTGA+GGG | - | chr7_4:38754481-38754500 | None:intergenic | 30.0% |
| !!! | ACATTTCTTTTTTGGGATTG+AGG | - | chr7_4:38754482-38754501 | None:intergenic | 30.0% |
| ACAATGTACCAAAACTGAAA+GGG | - | chr7_4:38754528-38754547 | None:intergenic | 30.0% | |
| AACAATGTACCAAAACTGAA+AGG | - | chr7_4:38754529-38754548 | None:intergenic | 30.0% | |
| !!! | AGGCAAGTTTTGGCTTAAAT+AGG | - | chr7_4:38749723-38749742 | None:intergenic | 35.0% |
| ! | TTCAATGAAGAGGCAAGTTT+TGG | - | chr7_4:38749733-38749752 | None:intergenic | 35.0% |
| GGGTTTGTGAAGTGAAATTA+GGG | - | chr7_4:38749757-38749776 | None:intergenic | 35.0% | |
| AGGGTTTGTGAAGTGAAATT+AGG | - | chr7_4:38749758-38749777 | None:intergenic | 35.0% | |
| CAAAGATTCGAAGAAATGAG+AGG | - | chr7_4:38749797-38749816 | None:intergenic | 35.0% | |
| !! | TAAGGAAGAAATGGGTTTTG+CGG | - | chr7_4:38749820-38749839 | None:intergenic | 35.0% |
| !!! | TGGATTTGTTTGTTTTGCAG+AGG | + | chr7_4:38750440-38750459 | Msa1152810:intron | 35.0% |
| TGTTAACAGAAATACAGGTC+GGG | - | chr7_4:38750922-38750941 | None:intergenic | 35.0% | |
| TTTCAATGGTTGCAGTGATT+TGG | + | chr7_4:38751087-38751106 | Msa1152810:intron | 35.0% | |
| !! | GATTTGGCTTGTCATATAGA+TGG | + | chr7_4:38751103-38751122 | Msa1152810:CDS | 35.0% |
| CAATTGATTACCTTCTTTCC+TGG | - | chr7_4:38751247-38751266 | None:intergenic | 35.0% | |
| ! | CTTTGTTTGTTGCATCTGAA+AGG | + | chr7_4:38751400-38751419 | Msa1152810:intron | 35.0% |
| GATCAAAATTCACAAGGCAA+AGG | - | chr7_4:38751429-38751448 | None:intergenic | 35.0% | |
| AGCTAGGATTAAATCCAATG+AGG | + | chr7_4:38751473-38751492 | Msa1152810:intron | 35.0% | |
| CTATGACAATAAAGCCTCAT+TGG | - | chr7_4:38751490-38751509 | None:intergenic | 35.0% | |
| ! | ACGCAACTTTTGTGGTTAAA+TGG | - | chr7_4:38751562-38751581 | None:intergenic | 35.0% |
| ! | AAGAAAAGACGCAACTTTTG+TGG | - | chr7_4:38751570-38751589 | None:intergenic | 35.0% |
| CTACATGATGAATACGTCAT+AGG | + | chr7_4:38751876-38751895 | Msa1152810:intron | 35.0% | |
| ATGACAAAAACAGGCTTCAT+TGG | - | chr7_4:38751914-38751933 | None:intergenic | 35.0% | |
| CATAAATACCCATATCCCTT+TGG | + | chr7_4:38751969-38751988 | Msa1152810:intron | 35.0% | |
| GATGAATACATCATAGGCTA+TGG | + | chr7_4:38752359-38752378 | Msa1152810:intron | 35.0% | |
| ATGACATAAACAGGCTTCAT+TGG | - | chr7_4:38752392-38752411 | None:intergenic | 35.0% | |
| ATGACATAAACAGGCTTCAT+TGG | - | chr7_4:38752392-38752411 | None:intergenic | 35.0% | |
| ATAAATACCCACTTCCCTTT+GGG | + | chr7_4:38752858-38752877 | Msa1152810:intron | 35.0% | |
| CAATAGAAAACACACCCAAA+GGG | - | chr7_4:38752875-38752894 | None:intergenic | 35.0% | |
| TCAATAGAAAACACACCCAA+AGG | - | chr7_4:38752876-38752895 | None:intergenic | 35.0% | |
| CAATATGGTTATGATCACCT+CGG | - | chr7_4:38753034-38753053 | None:intergenic | 35.0% | |
| GGAAAAAGAGGAAACCAATA+TGG | - | chr7_4:38752604-38752623 | None:intergenic | 35.0% | |
| CAAATTTCCTGAGTTGTAGT+AGG | + | chr7_4:38753228-38753247 | Msa1152810:intron | 35.0% | |
| CAATCACAAACTGCTTCAAT+TGG | - | chr7_4:38753365-38753384 | None:intergenic | 35.0% | |
| TTGAAGCAGTTTGTGATTGA+CGG | + | chr7_4:38753366-38753385 | Msa1152810:CDS | 35.0% | |
| TATCTCTAATCCGGATACAA+GGG | + | chr7_4:38753407-38753426 | Msa1152810:CDS | 35.0% | |
| TGCTTCTCATCCAATAACTT+AGG | - | chr7_4:38753586-38753605 | None:intergenic | 35.0% | |
| !! | ACTTGAAGATGAAAGCATCT+CGG | + | chr7_4:38753644-38753663 | Msa1152810:CDS | 35.0% |
| TAGAGTTACCTAGCAGAAAA+TGG | - | chr7_4:38753709-38753728 | None:intergenic | 35.0% | |
| TCATACATTCCACTAAACCA+AGG | - | chr7_4:38753838-38753857 | None:intergenic | 35.0% | |
| ! | TTTTCATGCAGAACAGGATA+TGG | - | chr7_4:38753878-38753897 | None:intergenic | 35.0% |
| AACATGAACAGTTCCACAAT+TGG | + | chr7_4:38753923-38753942 | Msa1152810:intron | 35.0% | |
| ACATGAACAGTTCCACAATT+GGG | + | chr7_4:38753924-38753943 | Msa1152810:intron | 35.0% | |
| TGCTATACTGTTTCCTTATC+AGG | + | chr7_4:38753973-38753992 | Msa1152810:intron | 35.0% | |
| TGCAACAAAATCACCTGATA+AGG | - | chr7_4:38753989-38754008 | None:intergenic | 35.0% | |
| TGTTGCACACATCAAATTCA+CGG | + | chr7_4:38754002-38754021 | Msa1152810:CDS | 35.0% | |
| CTTGTTAATGCCAAATGGAT+CGG | + | chr7_4:38754026-38754045 | Msa1152810:CDS | 35.0% | |
| !! | GGATCATCTATCGTTTTTGT+GGG | - | chr7_4:38754087-38754106 | None:intergenic | 35.0% |
| ACAAAGACAAAGAAGAAAGG+TGG | + | chr7_4:38754135-38754154 | Msa1152810:CDS | 35.0% | |
| AAGAAGAAAAAAGGTAGGCT+TGG | + | chr7_4:38754162-38754181 | Msa1152810:intron | 35.0% | |
| !! | CATATGCTTTCTGAAATGCA+TGG | + | chr7_4:38754289-38754308 | Msa1152810:intron | 35.0% |
| !! | GATGCTTTGTGTTTTTGTTC+AGG | + | chr7_4:38754363-38754382 | Msa1152810:intron | 35.0% |
| CAATGTACCAAAACTGAAAG+GGG | - | chr7_4:38754527-38754546 | None:intergenic | 35.0% | |
| AGGCAGTGAAAGAGAAATGA+GGG | - | chr7_4:38749777-38749796 | None:intergenic | 40.0% | |
| !! | CTCAGCTGCAGTTTTGTATT+TGG | - | chr7_4:38750050-38750069 | None:intergenic | 40.0% |
| GGAATGTAAACCAAAGGTCA+AGG | + | chr7_4:38750482-38750501 | Msa1152810:CDS | 40.0% | |
| GTGAAGAAGAAGATAGAGAG+AGG | + | chr7_4:38750887-38750906 | Msa1152810:CDS | 40.0% | |
| !!! | CTAGTTTTGTGATTACCCTG+TGG | + | chr7_4:38751026-38751045 | Msa1152810:intron | 40.0% |
| TTGTGATTACCCTGTGGTTT+CGG | + | chr7_4:38751032-38751051 | Msa1152810:intron | 40.0% | |
| AAATGATAGCCGAAACCACA+GGG | - | chr7_4:38751044-38751063 | None:intergenic | 40.0% | |
| TGAGAGAGGCTGAAAAAACT+GGG | - | chr7_4:38751792-38751811 | None:intergenic | 40.0% | |
| TTGAGAGAGGCTGAAAAAAC+TGG | - | chr7_4:38751793-38751812 | None:intergenic | 40.0% | |
| TGATGAATACGTCATAGGCT+AGG | + | chr7_4:38751881-38751900 | Msa1152810:intron | 40.0% | |
| TCAATAAAGACGCACCCAAA+GGG | - | chr7_4:38751987-38752006 | None:intergenic | 40.0% | |
| ! | TTTTGGCAACAGGGAAAAAG+AGG | - | chr7_4:38752179-38752198 | None:intergenic | 40.0% |
| !! | CCATTCAAGTTTTGGCAACA+GGG | - | chr7_4:38752188-38752207 | None:intergenic | 40.0% |
| TTGCCAAAACTTGAATGGCT+GGG | + | chr7_4:38752190-38752209 | Msa1152810:intron | 40.0% | |
| ! | TTTTGGCAACAGGGAAAAAG+AGG | - | chr7_4:38752179-38752198 | None:intergenic | 40.0% |
| !! | CCATTCAAGTTTTGGCAACA+GGG | - | chr7_4:38752188-38752207 | None:intergenic | 40.0% |
| !! | AGTTCCAGCCATTCAAGTTT+TGG | - | chr7_4:38752633-38752652 | None:intergenic | 40.0% |
| GATGAATACATCGTAGGCTA+TGG | + | chr7_4:38752769-38752788 | Msa1152810:intron | 40.0% | |
| CATAAATACCCACTTCCCTT+TGG | + | chr7_4:38752857-38752876 | Msa1152810:intron | 40.0% | |
| TAATATTGGCAACTTTGCCG+AGG | + | chr7_4:38752569-38752588 | Msa1152810:intron | 40.0% | |
| CGAGGTGATCATAACCATAT+TGG | + | chr7_4:38753032-38753051 | Msa1152810:intron | 40.0% | |
| ! | AGTTCCAGCCATTCAAGTTT+CGG | - | chr7_4:38752633-38752652 | None:intergenic | 40.0% |
| AATACACCCTACTACAACTC+AGG | - | chr7_4:38753238-38753257 | None:intergenic | 40.0% | |
| TCACAAACTGCTTCAATTGG+TGG | - | chr7_4:38753362-38753381 | None:intergenic | 40.0% | |
| GTTTGTGATTGACGGTAACA+AGG | + | chr7_4:38753374-38753393 | Msa1152810:CDS | 40.0% | |
| GTATCTCTAATCCGGATACA+AGG | + | chr7_4:38753406-38753425 | Msa1152810:CDS | 40.0% | |
| !! | ATAGTGACAAGTACTGGAGA+AGG | + | chr7_4:38753474-38753493 | Msa1152810:CDS | 40.0% |
| TCCAATAACTTAGGCTGCAA+GGG | - | chr7_4:38753577-38753596 | None:intergenic | 40.0% | |
| ATCCAATAACTTAGGCTGCA+AGG | - | chr7_4:38753578-38753597 | None:intergenic | 40.0% | |
| CTAGCAGAAAATGGCATGAT+TGG | - | chr7_4:38753700-38753719 | None:intergenic | 40.0% | |
| !!! | CAATCATGCCATTTTCTGCT+AGG | + | chr7_4:38753698-38753717 | Msa1152810:CDS | 40.0% |
| !! | ACGGTCTTGTTAATGCCAAA+TGG | + | chr7_4:38754021-38754040 | Msa1152810:CDS | 40.0% |
| !! | TTTTTGTGGGCTGCAATTCT+TGG | - | chr7_4:38754074-38754093 | None:intergenic | 40.0% |
| !! | GGGATCATCTATCGTTTTTG+TGG | - | chr7_4:38754088-38754107 | None:intergenic | 40.0% |
| GGCACAAAGACAAAGAAGAA+AGG | + | chr7_4:38754132-38754151 | Msa1152810:CDS | 40.0% | |
| AAGACAAAGAAGAAAGGTGG+CGG | + | chr7_4:38754138-38754157 | Msa1152810:CDS | 40.0% | |
| GCGGAAAGAAGAAAAAAGGT+AGG | + | chr7_4:38754157-38754176 | Msa1152810:intron | 40.0% | |
| TTCAGGTAAGAAAGAGGACA+AGG | + | chr7_4:38754380-38754399 | Msa1152810:intron | 40.0% | |
| GTCAATTCATTCCTGAGATG+TGG | - | chr7_4:38754451-38754470 | None:intergenic | 40.0% | |
| !!! | TTTTTTGGGATTGAGGGTGA+GGG | - | chr7_4:38754475-38754494 | None:intergenic | 40.0% |
| GAGGCAGTGAAAGAGAAATG+AGG | - | chr7_4:38749778-38749797 | None:intergenic | 45.0% | |
| !!! | TGGGTTTTTCAGGAGCATCA+AGG | + | chr7_4:38749947-38749966 | Msa1152810:intron | 45.0% |
| CATCAAGGATTGAACGAGTG+AGG | + | chr7_4:38749962-38749981 | Msa1152810:five_prime_UTR | 45.0% | |
| CACCATGTCGGATGATGAAA+GGG | + | chr7_4:38749985-38750004 | Msa1152810:exon | 45.0% | |
| ATGTCGACAACCTTGACCTT+TGG | - | chr7_4:38750495-38750514 | None:intergenic | 45.0% | |
| GTTGTCGACATTTGCGAGAA+AGG | + | chr7_4:38750504-38750523 | Msa1152810:CDS | 45.0% | |
| AACTAGTATCCTCTCACGTG+CGG | + | chr7_4:38750565-38750584 | Msa1152810:intron | 45.0% | |
| TTCCAACACTGTCTCATCAC+TGG | - | chr7_4:38750972-38750991 | None:intergenic | 45.0% | |
| ! | GATGAGACAGTGTTGGAAGA+AGG | + | chr7_4:38750974-38750993 | Msa1152810:CDS | 45.0% |
| CAAATGATAGCCGAAACCAC+AGG | - | chr7_4:38751045-38751064 | None:intergenic | 45.0% | |
| CACACTCATGTTCTTCAGGA+AGG | + | chr7_4:38751145-38751164 | Msa1152810:CDS | 45.0% | |
| TCATGTTCTTCAGGAAGGTC+CGG | + | chr7_4:38751150-38751169 | Msa1152810:CDS | 45.0% | |
| AGGTTGCCTTAAGGCTTGTA+AGG | + | chr7_4:38751221-38751240 | Msa1152810:CDS | 45.0% | |
| ATCCTGCTCCACATGTAGAT+AGG | + | chr7_4:38751326-38751345 | Msa1152810:intron | 45.0% | |
| AACCTATCTACATGTGGAGC+AGG | - | chr7_4:38751331-38751350 | None:intergenic | 45.0% | |
| TGAGCTACATATGTCAGCTG+AGG | - | chr7_4:38751595-38751614 | None:intergenic | 45.0% | |
| GAGAGAGGCTGAAAAAACTG+GGG | - | chr7_4:38751791-38751810 | None:intergenic | 45.0% | |
| GTCAATAAAGACGCACCCAA+AGG | - | chr7_4:38751988-38752007 | None:intergenic | 45.0% | |
| TAATATTGGCGACTTTGCCG+AGG | + | chr7_4:38752132-38752151 | Msa1152810:intron | 45.0% | |
| CCCTGTTGCCAAAACTTGAA+TGG | + | chr7_4:38752185-38752204 | Msa1152810:intron | 45.0% | |
| !! | GCCATTCAAGTTTTGGCAAC+AGG | - | chr7_4:38752189-38752208 | None:intergenic | 45.0% |
| GTTGCCAAAACTTGAATGGC+TGG | + | chr7_4:38752189-38752208 | Msa1152810:intron | 45.0% | |
| !! | AGTCCCAGCCATTCAAGTTT+TGG | - | chr7_4:38752196-38752215 | None:intergenic | 45.0% |
| CCCTGTTGCCAAAACTTGAA+TGG | + | chr7_4:38752185-38752204 | Msa1152810:intron | 45.0% | |
| !! | GCCATTCAAGTTTTGGCAAC+AGG | - | chr7_4:38752189-38752208 | None:intergenic | 45.0% |
| GTTGCCAAAACTTGAATGGC+TGG | + | chr7_4:38752189-38752208 | Msa1152810:intron | 45.0% | |
| CTAGTGCAGCCAACATATCT+TGG | + | chr7_4:38752693-38752712 | Msa1152810:intron | 45.0% | |
| AAACACACCCAAAGGGAAGT+GGG | - | chr7_4:38752868-38752887 | None:intergenic | 45.0% | |
| AAAACACACCCAAAGGGAAG+TGG | - | chr7_4:38752869-38752888 | None:intergenic | 45.0% | |
| TTTCGGCAACAGGGAAAAAG+AGG | - | chr7_4:38753061-38753080 | None:intergenic | 45.0% | |
| ! | CCATTCAAGTTTCGGCAACA+GGG | - | chr7_4:38753070-38753089 | None:intergenic | 45.0% |
| GAAACTTGAATGGCTGGAAC+TGG | + | chr7_4:38753077-38753096 | Msa1152810:intron | 45.0% | |
| GCATCATCAACCCTTGTATC+CGG | - | chr7_4:38753420-38753439 | None:intergenic | 45.0% | |
| !! | GGTTGATGATGCAGAGTTTG+AGG | + | chr7_4:38753428-38753447 | Msa1152810:CDS | 45.0% |
| TCCCTTGCAGCCTAAGTTAT+TGG | + | chr7_4:38753573-38753592 | Msa1152810:intron | 45.0% | |
| ACACTCTGATTACAGGGCTT+TGG | + | chr7_4:38753796-38753815 | Msa1152810:intron | 45.0% | |
| AGCAAGAAGTTTAGGCTCGT+AGG | - | chr7_4:38753957-38753976 | None:intergenic | 45.0% | |
| GATAGATGATCCCGAGATCA+AGG | + | chr7_4:38754095-38754114 | Msa1152810:CDS | 45.0% | |
| CTTCTTTGTCTTTGTGCCCA+AGG | - | chr7_4:38754130-38754149 | None:intergenic | 45.0% | |
| !! | GGTGGCGGAAAGAAGAAAAA+AGG | + | chr7_4:38754153-38754172 | Msa1152810:CDS | 45.0% |
| AACAAATGAGGCCACATCTC+AGG | + | chr7_4:38754437-38754456 | Msa1152810:CDS | 45.0% | |
| !!! | CTTTTTTGGGATTGAGGGTG+AGG | - | chr7_4:38754476-38754495 | None:intergenic | 45.0% |
| ! | TCTGACACCCCTTTCAGTTT+TGG | + | chr7_4:38754517-38754536 | Msa1152810:three_prime_UTR | 45.0% |
| !!! | TTTTGTTAATATTATTTAAA+TGG | + | chr7_4:38750802-38750821 | Msa1152810:intron | 5.0% |
| GCACCATGTCGGATGATGAA+AGG | + | chr7_4:38749984-38750003 | Msa1152810:exon | 50.0% | |
| CTCCCTTTCATCATCCGACA+TGG | - | chr7_4:38749990-38750009 | None:intergenic | 50.0% | |
| CATGTCGGATGATGAAAGGG+AGG | + | chr7_4:38749988-38750007 | Msa1152810:exon | 50.0% | |
| GGATGATGAAAGGGAGGAGA+AGG | + | chr7_4:38749994-38750013 | Msa1152810:CDS | 50.0% | |
| TGAAAGGGAGGAGAAGGAGT+TGG | + | chr7_4:38750000-38750019 | Msa1152810:CDS | 50.0% | |
| TAATGTATGCCGCACGTGAG+AGG | - | chr7_4:38750577-38750596 | None:intergenic | 50.0% | |
| ! | CACTGGCTAGAGGAGAGAAA+TGG | - | chr7_4:38750955-38750974 | None:intergenic | 50.0% |
| ! | ACTGTCTCATCACTGGCTAG+AGG | - | chr7_4:38750965-38750984 | None:intergenic | 50.0% |
| AGCCAGTGATGAGACAGTGT+TGG | + | chr7_4:38750967-38750986 | Msa1152810:CDS | 50.0% | |
| ! | AGATGGGTTCATTGCTGCTG+TGG | + | chr7_4:38751120-38751139 | Msa1152810:CDS | 50.0% |
| GGCTCACACTCATGTTCTTC+AGG | + | chr7_4:38751141-38751160 | Msa1152810:CDS | 50.0% | |
| !! | TCCTGGCCTTACAAGCCTTA+AGG | - | chr7_4:38751230-38751249 | None:intergenic | 50.0% |
| GCTTGTAAGGCCAGGAAAGA+AGG | + | chr7_4:38751234-38751253 | Msa1152810:CDS | 50.0% | |
| AGACGCACCCAAAGGGATAT+GGG | - | chr7_4:38751980-38751999 | None:intergenic | 50.0% | |
| AAGACGCACCCAAAGGGATA+TGG | - | chr7_4:38751981-38752000 | None:intergenic | 50.0% | |
| CCCTGTTGCCGAAACTTGAA+TGG | + | chr7_4:38753067-38753086 | Msa1152810:intron | 50.0% | |
| ! | GCCATTCAAGTTTCGGCAAC+AGG | - | chr7_4:38753071-38753090 | None:intergenic | 50.0% |
| GTTGCCGAAACTTGAATGGC+TGG | + | chr7_4:38753071-38753090 | Msa1152810:intron | 50.0% | |
| !! | GACAAGTACTGGAGAAGGCA+AGG | + | chr7_4:38753479-38753498 | Msa1152810:CDS | 50.0% |
| ! | AGTACTGGAGAAGGCAAGGT+AGG | + | chr7_4:38753483-38753502 | Msa1152810:intron | 50.0% |
| ! | CTCTGATTACAGGGCTTTGG+AGG | + | chr7_4:38753799-38753818 | Msa1152810:intron | 50.0% |
| AAGAGCTCGCCTTGGTTTAG+TGG | + | chr7_4:38753826-38753845 | Msa1152810:CDS | 50.0% | |
| ! | CCAGGCTTTTCATGCAGAAC+AGG | - | chr7_4:38753884-38753903 | None:intergenic | 50.0% |
| CCTGTTCTGCATGAAAAGCC+TGG | + | chr7_4:38753881-38753900 | Msa1152810:CDS | 50.0% | |
| GTAGGAACGCAACCCAATTG+TGG | - | chr7_4:38753939-38753958 | None:intergenic | 50.0% | |
| ATGATCCCGAGATCAAGGCA+TGG | + | chr7_4:38754100-38754119 | Msa1152810:CDS | 50.0% | |
| !! | ATCAAGGCATGGCTAGCCTT+GGG | + | chr7_4:38754111-38754130 | Msa1152810:CDS | 50.0% |
| ! | GCCAGTGGACTCAACAAATG+AGG | + | chr7_4:38754425-38754444 | Msa1152810:CDS | 50.0% |
| ! | GCCTCATTTGTTGAGTCCAC+TGG | - | chr7_4:38754429-38754448 | None:intergenic | 50.0% |
| ! | GAACGAGTGAGGCACCATGT+CGG | + | chr7_4:38749973-38749992 | Msa1152810:exon | 55.0% |
| CTTCAGGAAGGTCCGGTTAC+TGG | + | chr7_4:38751157-38751176 | Msa1152810:CDS | 55.0% | |
| AGGAAGGTCCGGTTACTGGA+CGG | + | chr7_4:38751161-38751180 | Msa1152810:CDS | 55.0% | |
| AGCTGCAAACACTGCTGCTG+AGG | + | chr7_4:38751201-38751220 | Msa1152810:CDS | 55.0% | |
| CTGCTGCTGAGGTTGCCTTA+AGG | + | chr7_4:38751212-38751231 | Msa1152810:CDS | 55.0% | |
| GCCTTAAGGCTTGTAAGGCC+AGG | + | chr7_4:38751226-38751245 | Msa1152810:CDS | 55.0% | |
| GAGGAGAAAAGAGCTCGCCT+TGG | + | chr7_4:38753818-38753837 | Msa1152810:CDS | 55.0% | |
| GGAGTGGATGAGATGTGACG+CGG | - | chr7_4:38754053-38754072 | None:intergenic | 55.0% | |
| ! | GTGGGCTGCAATTCTTGGAG+TGG | - | chr7_4:38754069-38754088 | None:intergenic | 55.0% |
| GCTAGCCATGCCTTGATCTC+GGG | - | chr7_4:38754108-38754127 | None:intergenic | 55.0% | |
| ! | GGCTAGCCATGCCTTGATCT+CGG | - | chr7_4:38754109-38754128 | None:intergenic | 55.0% |
| !! | GATCAAGGCATGGCTAGCCT+TGG | + | chr7_4:38754110-38754129 | Msa1152810:CDS | 55.0% |
| GGAAGGTCCGGTTACTGGAC+GGG | + | chr7_4:38751162-38751181 | Msa1152810:CDS | 60.0% | |
| TCTGCTGCCCGTCCAGTAAC+CGG | - | chr7_4:38751172-38751191 | None:intergenic | 60.0% | |
| GTGACGCGGTCCGATCCATT+TGG | - | chr7_4:38754039-38754058 | None:intergenic | 60.0% | |
| GACAGCAGAAGCTGAGCCAG+TGG | + | chr7_4:38754410-38754429 | Msa1152810:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 38749706 | 38754714 | 38749706 | ID=Msa1152810;Name=Msa1152810 |
| chr7_4 | mRNA | 38749706 | 38754714 | 38749706 | ID=Msa1152810-mRNA-1;Parent=Msa1152810;Name=Msa1152810-mRNA-1;_AED=0.05;_eAED=0.05;_QI=166|1|1|1|0.8|0.72|11|250|394 |
| chr7_4 | exon | 38749706 | 38749780 | 38749706 | ID=Msa1152810-mRNA-1:exon:9311;Parent=Msa1152810-mRNA-1 |
| chr7_4 | exon | 38749802 | 38749862 | 38749802 | ID=Msa1152810-mRNA-1:exon:9312;Parent=Msa1152810-mRNA-1 |
| chr7_4 | exon | 38749959 | 38750079 | 38749959 | ID=Msa1152810-mRNA-1:exon:9313;Parent=Msa1152810-mRNA-1 |
| chr7_4 | exon | 38750460 | 38750544 | 38750460 | ID=Msa1152810-mRNA-1:exon:9314;Parent=Msa1152810-mRNA-1 |
| chr7_4 | exon | 38750862 | 38751011 | 38750862 | ID=Msa1152810-mRNA-1:exon:9315;Parent=Msa1152810-mRNA-1 |
| chr7_4 | exon | 38751102 | 38751255 | 38751102 | ID=Msa1152810-mRNA-1:exon:9316;Parent=Msa1152810-mRNA-1 |
| chr7_4 | exon | 38753285 | 38753500 | 38753285 | ID=Msa1152810-mRNA-1:exon:9317;Parent=Msa1152810-mRNA-1 |
| chr7_4 | exon | 38753583 | 38753719 | 38753583 | ID=Msa1152810-mRNA-1:exon:9318;Parent=Msa1152810-mRNA-1 |
| chr7_4 | exon | 38753811 | 38753902 | 38753811 | ID=Msa1152810-mRNA-1:exon:9319;Parent=Msa1152810-mRNA-1 |
| chr7_4 | exon | 38753995 | 38754174 | 38753995 | ID=Msa1152810-mRNA-1:exon:9320;Parent=Msa1152810-mRNA-1 |
| chr7_4 | exon | 38754385 | 38754714 | 38754385 | ID=Msa1152810-mRNA-1:exon:9321;Parent=Msa1152810-mRNA-1 |
| chr7_4 | five_prime_UTR | 38749706 | 38749780 | 38749706 | ID=Msa1152810-mRNA-1:five_prime_utr;Parent=Msa1152810-mRNA-1 |
| chr7_4 | five_prime_UTR | 38749802 | 38749862 | 38749802 | ID=Msa1152810-mRNA-1:five_prime_utr;Parent=Msa1152810-mRNA-1 |
| chr7_4 | five_prime_UTR | 38749959 | 38749988 | 38749959 | ID=Msa1152810-mRNA-1:five_prime_utr;Parent=Msa1152810-mRNA-1 |
| chr7_4 | CDS | 38749989 | 38750079 | 38749989 | ID=Msa1152810-mRNA-1:cds;Parent=Msa1152810-mRNA-1 |
| chr7_4 | CDS | 38750460 | 38750544 | 38750460 | ID=Msa1152810-mRNA-1:cds;Parent=Msa1152810-mRNA-1 |
| chr7_4 | CDS | 38750862 | 38751011 | 38750862 | ID=Msa1152810-mRNA-1:cds;Parent=Msa1152810-mRNA-1 |
| chr7_4 | CDS | 38751102 | 38751255 | 38751102 | ID=Msa1152810-mRNA-1:cds;Parent=Msa1152810-mRNA-1 |
| chr7_4 | CDS | 38753285 | 38753500 | 38753285 | ID=Msa1152810-mRNA-1:cds;Parent=Msa1152810-mRNA-1 |
| chr7_4 | CDS | 38753583 | 38753719 | 38753583 | ID=Msa1152810-mRNA-1:cds;Parent=Msa1152810-mRNA-1 |
| chr7_4 | CDS | 38753811 | 38753902 | 38753811 | ID=Msa1152810-mRNA-1:cds;Parent=Msa1152810-mRNA-1 |
| chr7_4 | CDS | 38753995 | 38754174 | 38753995 | ID=Msa1152810-mRNA-1:cds;Parent=Msa1152810-mRNA-1 |
| chr7_4 | CDS | 38754385 | 38754464 | 38754385 | ID=Msa1152810-mRNA-1:cds;Parent=Msa1152810-mRNA-1 |
| chr7_4 | three_prime_UTR | 38754465 | 38754714 | 38754465 | ID=Msa1152810-mRNA-1:three_prime_utr;Parent=Msa1152810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
