AlfalfaGEDB | Msa0705800

M. sativa cultivar zhongmu-4 / Msa0705800

KEGG: K02951
GO: -
PFAM: PF01248.29

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0705800	XP_003630279.1	100.000	140	0	0	107	246	4	143	3.54e-95	285

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0705800	sp\|Q9XHS0\|RS12_HORVU	72.857	140	38	0	107	246	4	143	4.39e-69	212

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0705800	G7LE33	100.000	140	0	0	107	246	4	143	1.69e-95	285

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001760	Msa0705800	0.854531	1.156580e-61	-8.615850e-47
Msa0003330	Msa0705800	0.835803	1.356219e-56	-8.615850e-47
Msa0003870	Msa0705800	0.827362	1.631070e-54	-8.615850e-47
Msa0027590	Msa0705800	0.882815	7.589258e-71	-8.615850e-47
Msa0032780	Msa0705800	0.824825	6.544521e-54	-8.615850e-47
Msa0040220	Msa0705800	0.806289	8.841772e-50	-8.615850e-47
Msa0042480	Msa0705800	0.822267	2.595996e-53	-8.615850e-47
Msa0045730	Msa0705800	0.824896	6.294234e-54	-8.615850e-47
Msa0065110	Msa0705800	0.801099	1.056376e-48	-8.615850e-47
Msa0070840	Msa0705800	0.808167	3.537612e-50	-8.615850e-47
Msa0072570	Msa0705800	0.858457	8.130285e-63	-8.615850e-47
Msa0075350	Msa0705800	0.879848	8.912945e-70	-8.615850e-47
Msa0079590	Msa0705800	0.819413	1.176884e-52	-8.615850e-47
Msa0087910	Msa0705800	0.810867	9.308575e-51	-8.615850e-47
Msa0114570	Msa0705800	0.856389	3.325109e-62	-8.615850e-47
Msa0116130	Msa0705800	0.817482	3.223154e-52	-8.615850e-47
Msa0116670	Msa0705800	0.817650	2.954786e-52	-8.615850e-47
Msa0604960	Msa0705800	0.851213	1.027549e-60	-8.615850e-47
Msa0605890	Msa0705800	0.807976	3.885685e-50	-8.615850e-47
Msa0617540	Msa0705800	0.840971	6.304652e-58	-8.615850e-47
Msa0619230	Msa0705800	0.807199	5.681215e-50	-8.615850e-47
Msa0622230	Msa0705800	0.823597	1.271642e-53	-8.615850e-47
Msa0622750	Msa0705800	0.828943	6.786561e-55	-8.615850e-47
Msa0623200	Msa0705800	0.810488	1.124208e-50	-8.615850e-47
Msa0623370	Msa0705800	0.841577	4.368314e-58	-8.615850e-47
Msa0643820	Msa0705800	0.800494	1.403532e-48	-8.615850e-47
Msa0653060	Msa0705800	0.820415	6.941796e-53	-8.615850e-47
Msa0656410	Msa0705800	0.845808	3.223156e-59	-8.615850e-47
Msa0686550	Msa0705800	0.802976	4.345369e-49	-8.615850e-47
Msa0694400	Msa0705800	0.805292	1.432497e-49	-8.615850e-47
Msa0705800	Msa0712610	0.918363	1.708646e-86	-8.615850e-47
Msa0705800	Msa0717380	0.840952	6.377048e-58	-8.615850e-47
Msa0705800	Msa0729200	0.851626	7.852072e-61	-8.615850e-47
Msa0705800	Msa0748350	0.805207	1.491989e-49	-8.615850e-47
Msa0705800	Msa0752910	0.849558	2.994068e-60	-8.615850e-47
Msa0705800	Msa0758420	0.809268	2.058075e-50	-8.615850e-47
Msa0705800	Msa0766080	0.821452	4.007976e-53	-8.615850e-47
Msa0705800	Msa0769590	0.837769	4.273991e-57	-8.615850e-47
Msa0705800	Msa0781080	0.868763	5.125638e-66	-8.615850e-47
Msa0705800	Msa0783630	0.802701	4.951432e-49	-8.615850e-47
Msa0705800	Msa0788380	0.889989	1.477156e-73	-8.615850e-47
Msa0705800	Msa0792420	0.847288	1.271182e-59	-8.615850e-47
Msa0705800	Msa0799830	0.843569	1.292586e-58	-8.615850e-47
Msa0705800	Msa0802480	0.817570	3.079037e-52	-8.615850e-47
Msa0705800	Msa0806880	0.805065	1.597904e-49	-8.615850e-47
Msa0705800	Msa0822580	0.907478	4.854263e-81	-8.615850e-47
Msa0705800	Msa0827380	0.843108	1.715800e-58	-8.615850e-47
Msa0705800	Msa0838070	0.843074	1.751965e-58	-8.615850e-47
Msa0705800	Msa0858010	0.816144	6.432336e-52	-8.615850e-47
Msa0705800	Msa0861320	0.855044	8.213908e-62	-8.615850e-47
Msa0705800	Msa0876170	0.905752	3.077909e-80	-8.615850e-47
Msa0705800	Msa0888810	0.856020	4.265308e-62	-8.615850e-47
Msa0705800	Msa0915540	0.923650	2.006204e-89	-8.615850e-47
Msa0705800	Msa0929700	0.812721	3.675962e-51	-8.615850e-47
Msa0705800	Msa0929790	0.816491	5.381430e-52	-8.615850e-47
Msa0705800	Msa0945480	0.850679	1.453075e-60	-8.615850e-47
Msa0705800	Msa1021120	0.888926	3.826383e-73	-8.615850e-47
Msa0705800	Msa1037290	0.897844	9.475517e-77	-8.615850e-47
Msa0705800	Msa1039520	0.829646	4.582169e-55	-8.615850e-47
Msa0705800	Msa1040160	0.859642	3.590520e-63	-8.615850e-47
Msa0705800	Msa1041680	0.886287	3.898565e-72	-8.615850e-47
Msa0705800	Msa1042100	0.838210	3.292079e-57	-8.615850e-47
Msa0705800	Msa1058700	0.854494	1.186065e-61	-8.615850e-47
Msa0705800	Msa1078870	0.814987	1.164343e-51	-8.615850e-47
Msa0705800	Msa1080350	0.887082	1.949453e-72	-8.615850e-47
Msa0705800	Msa1082170	0.904971	7.017705e-80	-8.615850e-47
Msa0705800	Msa1083370	0.864168	1.476754e-64	-8.615850e-47
Msa0705800	Msa1089220	0.805089	1.579590e-49	-8.615850e-47
Msa0705800	Msa1094380	0.811636	6.341748e-51	-8.615850e-47
Msa0705800	Msa1096900	0.868349	6.975768e-66	-8.615850e-47
Msa0705800	Msa1125860	0.878032	3.898930e-69	-8.615850e-47
Msa0705800	Msa1126060	0.876875	9.855077e-69	-8.615850e-47
Msa0705800	Msa1126520	0.922436	9.853578e-89	-8.615850e-47
Msa0705800	Msa1152810	0.806327	8.681159e-50	-8.615850e-47
Msa0705800	Msa1164150	0.895723	7.306102e-76	-8.615850e-47
Msa0705800	Msa1165640	0.829332	5.461172e-55	-8.615850e-47
Msa0705800	Msa1166570	0.889703	1.909939e-73	-8.615850e-47
Msa0705800	Msa1167540	0.845138	4.894330e-59	-8.615850e-47
Msa0705800	Msa1167550	0.844774	6.136702e-59	-8.615850e-47
Msa0705800	Msa1180000	0.832679	8.239428e-56	-8.615850e-47
Msa0705800	Msa1186030	0.889251	2.863369e-73	-8.615850e-47
Msa0705800	Msa1193690	0.806821	6.829428e-50	-8.615850e-47
Msa0705800	Msa1218170	0.894372	2.624178e-75	-8.615850e-47
Msa0705800	Msa1240270	0.886023	4.904325e-72	-8.615850e-47
Msa0705800	Msa1256840	0.845286	4.465278e-59	-8.615850e-47
Msa0705800	Msa1258540	0.838364	3.005211e-57	-8.615850e-47
Msa0705800	Msa1263620	0.837239	5.844460e-57	-8.615850e-47
Msa0705800	Msa1270640	0.827544	1.475617e-54	-8.615850e-47
Msa0705800	Msa1270710	0.817632	2.981962e-52	-8.615850e-47
Msa0705800	Msa1278070	0.803560	3.288795e-49	-8.615850e-47
Msa0705800	Msa1295150	0.803887	2.812305e-49	-8.615850e-47
Msa0705800	Msa1301640	0.869592	2.758021e-66	-8.615850e-47
Msa0705800	Msa1311400	0.881051	3.309902e-70	-8.615850e-47
Msa0705800	Msa1321790	0.807597	4.677814e-50	-8.615850e-47
Msa0705800	Msa1332250	0.847646	1.013730e-59	-8.615850e-47
Msa0705800	Msa1338190	0.810843	9.420250e-51	-8.615850e-47
Msa0705800	Msa1352140	0.851042	1.148513e-60	-8.615850e-47
Msa0705800	Msa1356790	0.909848	3.615537e-82	-8.615850e-47
Msa0705800	Msa1362790	0.863749	1.992719e-64	-8.615850e-47
Msa0705800	Msa1364110	0.804496	2.101094e-49	-8.615850e-47
Msa0705800	Msa1368920	0.897750	1.038781e-76	-8.615850e-47
Msa0705800	Msa1369190	0.845912	3.020846e-59	-8.615850e-47
Msa0705800	Msa1374240	0.891417	4.048479e-74	-8.615850e-47
Msa0705800	Msa1390760	0.802176	6.352554e-49	-8.615850e-47
Msa0705800	Msa1392590	0.872034	4.334769e-67	-8.615850e-47
Msa0705800	Msa1397100	0.887440	1.424638e-72	-8.615850e-47
Msa0705800	Msa1403910	0.915570	5.032624e-85	-8.615850e-47
Msa0705800	Msa1406080	0.837893	3.973069e-57	-8.615850e-47
Msa0705800	Msa1413500	0.803195	3.914742e-49	-8.615850e-47
Msa0705800	Msa1418770	0.888629	4.984482e-73	-8.615850e-47
Msa0705800	Msa1426120	0.823458	1.370160e-53	-8.615850e-47
Msa0705800	Msa1426370	0.822422	2.389662e-53	-8.615850e-47
Msa0705800	Msa1426490	0.858295	9.088940e-63	-8.615850e-47
Msa0705800	Msa1432310	0.808346	3.240355e-50	-8.615850e-47
Msa0705800	Msa1446410	0.841779	3.862135e-58	-8.615850e-47
Msa0705800	Msa1463570	0.831769	1.383204e-55	-8.615850e-47
Msa0123010	Msa0705800	0.845180	4.769350e-59	-8.615850e-47
Msa0128330	Msa0705800	0.824434	8.088081e-54	-8.615850e-47
Msa0133540	Msa0705800	0.813704	2.237325e-51	-8.615850e-47
Msa0134580	Msa0705800	0.804677	1.925795e-49	-8.615850e-47
Msa0138890	Msa0705800	0.868208	7.745550e-66	-8.615850e-47
Msa0167860	Msa0705800	0.810029	1.412507e-50	-8.615850e-47
Msa0172930	Msa0705800	0.833798	4.335119e-56	-8.615850e-47
Msa0173530	Msa0705800	0.813966	1.958885e-51	-8.615850e-47
Msa0174580	Msa0705800	0.811731	6.044905e-51	-8.615850e-47
Msa0181490	Msa0705800	0.828429	9.034046e-55	-8.615850e-47
Msa0186740	Msa0705800	0.805998	1.018087e-49	-8.615850e-47
Msa0191450	Msa0705800	0.903110	4.865417e-79	-8.615850e-47
Msa0191550	Msa0705800	0.875743	2.421731e-68	-8.615850e-47
Msa0192750	Msa0705800	0.874684	5.571301e-68	-8.615850e-47
Msa0194940	Msa0705800	0.845944	2.959573e-59	-8.615850e-47
Msa0210330	Msa0705800	0.853238	2.726527e-61	-8.615850e-47
Msa0210360	Msa0705800	0.878404	2.885497e-69	-8.615850e-47
Msa0218830	Msa0705800	0.808056	3.735185e-50	-8.615850e-47
Msa0219120	Msa0705800	0.802714	4.921887e-49	-8.615850e-47
Msa0222730	Msa0705800	0.821535	3.834671e-53	-8.615850e-47
Msa0229150	Msa0705800	0.868622	5.693286e-66	-8.615850e-47
Msa0235050	Msa0705800	0.835769	1.383394e-56	-8.615850e-47
Msa0369410	Msa0705800	0.854353	1.302856e-61	-8.615850e-47
Msa0376830	Msa0705800	0.823990	1.028710e-53	-8.615850e-47
Msa0377520	Msa0705800	0.826074	3.311622e-54	-8.615850e-47
Msa0426090	Msa0705800	0.844813	5.989756e-59	-8.615850e-47
Msa0426250	Msa0705800	0.817391	3.378343e-52	-8.615850e-47
Msa0463520	Msa0705800	0.861641	8.894080e-64	-8.615850e-47
Msa0471880	Msa0705800	0.885266	9.429317e-72	-8.615850e-47
Msa0472480	Msa0705800	0.843773	1.139951e-58	-8.615850e-47
Msa0475810	Msa0705800	0.814034	1.892382e-51	-8.615850e-47
Msa0481520	Msa0705800	0.896736	2.770574e-76	-8.615850e-47
Msa0481850	Msa0705800	0.885968	5.145554e-72	-8.615850e-47
Msa0239420	Msa0705800	0.819651	1.038550e-52	-8.615850e-47
Msa0257450	Msa0705800	0.805714	1.168436e-49	-8.615850e-47
Msa0265250	Msa0705800	0.801122	1.045160e-48	-8.615850e-47
Msa0281370	Msa0705800	0.835494	1.624638e-56	-8.615850e-47
Msa0297830	Msa0705800	0.897002	2.144510e-76	-8.615850e-47
Msa0298870	Msa0705800	0.874862	4.847555e-68	-8.615850e-47
Msa0301220	Msa0705800	0.869330	3.356900e-66	-8.615850e-47
Msa0306690	Msa0705800	0.824393	8.272222e-54	-8.615850e-47
Msa0315430	Msa0705800	0.836588	8.569983e-57	-8.615850e-47
Msa0321270	Msa0705800	0.805127	1.551094e-49	-8.615850e-47
Msa0333910	Msa0705800	0.810323	1.220285e-50	-8.615850e-47
Msa0334030	Msa0705800	0.824181	9.275867e-54	-8.615850e-47
Msa0335840	Msa0705800	0.904014	1.908772e-79	-8.615850e-47
Msa0337670	Msa0705800	0.833791	4.354019e-56	-8.615850e-47
Msa0483110	Msa0705800	0.809760	1.613327e-50	-8.615850e-47
Msa0517480	Msa0705800	0.857113	2.035613e-62	-8.615850e-47
Msa0529900	Msa0705800	0.805537	1.272365e-49	-8.615850e-47
Msa0540480	Msa0705800	0.892077	2.212479e-74	-8.615850e-47
Msa0546030	Msa0705800	0.872573	2.866376e-67	-8.615850e-47
Msa0550420	Msa0705800	0.866451	2.824313e-65	-8.615850e-47
Msa0573550	Msa0705800	0.810929	9.026570e-51	-8.615850e-47
Msa0582320	Msa0705800	0.837486	5.052786e-57	-8.615850e-47
Msa0584030	Msa0705800	0.879471	1.212737e-69	-8.615850e-47
Msa0591030	Msa0705800	0.816467	5.448230e-52	-8.615850e-47
Msa0591050	Msa0705800	0.871946	4.637327e-67	-8.615850e-47
Msa0596370	Msa0705800	0.833897	4.096678e-56	-8.615850e-47
Msa0597240	Msa0705800	0.801282	9.692964e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0705800	MtrunA17_Chr8g0384331	100.000	140	0	0	107	246	4	143	3.26e-99	285
Msa0705800	MtrunA17_Chr5g0399411	96.000	125	5	0	122	246	18	142	1.53e-85	251
Msa0705800	MtrunA17_Chr4g0001281	92.063	126	10	0	121	246	19	144	4.76e-82	242
Msa0705800	MtrunA17_Chr4g0037191	67.308	52	16	1	107	157	54	105	1.76e-14	67.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0705800	AT2G32060.3	76.000	125	29	1	122	246	21	144	1.50e-65	200
Msa0705800	AT2G32060.1	76.000	125	29	1	122	246	21	144	1.50e-65	200
Msa0705800	AT2G32060.2	76.000	125	29	1	122	246	21	144	1.50e-65	200
Msa0705800	AT1G15930.1	74.400	125	31	1	122	246	21	144	2.69e-62	192
Msa0705800	AT1G15930.2	74.400	125	31	1	122	246	21	144	2.69e-62	192

Find 61 sgRNAs with CRISPR-Local

Find 295 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTCAACAAATTCAAGTAAA+AGG	0.275254	4_4:-78607986	None:intergenic
TTCACCAACTTGACGTAATC+AGG	0.299059	4_4:-78606890	None:intergenic
TCTCCAAGGGTCTTTGCATT+TGG	0.313809	4_4:-78606953	None:intergenic
TGGTTACAAATATCTGTTTC+CGG	0.314033	4_4:+78608169	Msa0705800:three_prime_UTR
GTTGCTGCAGCTGGAATTCC+AGG	0.331115	4_4:+78606719	Msa0705800:CDS
GGAGGGAGTATGTAAACATT+AGG	0.354098	4_4:+78605836	Msa0705800:CDS
AATCAACTTGCAATTATGTC+TGG	0.359633	4_4:+78606101	Msa0705800:CDS
CACAATCGTCTTCAACAAAA+AGG	0.387726	4_4:+78605972	Msa0705800:CDS
ATTGAGACTGCCACAAATCT+AGG	0.388989	4_4:-78607863	None:intergenic
AAGCTATAAACCCTAATGTT+TGG	0.397206	4_4:-78605879	None:intergenic
CCTATGCAGATAATCCAAAA+AGG	0.401269	4_4:-78607924	None:intergenic
ATTCCAGCTGCAGCAACAAC+TGG	0.406602	4_4:-78606713	None:intergenic
TGCAAAGACCCTTGGAGAAT+GGG	0.412944	4_4:+78606958	Msa0705800:CDS
ATTTGTAACCAGGCGCAGTT+TGG	0.416795	4_4:-78608157	None:intergenic
ATAATATCCATTGGCTCCCC+TGG	0.419454	4_4:-78606737	None:intergenic
CCACTAGCATTTGCAGAACT+AGG	0.423529	4_4:+78605938	Msa0705800:CDS
GAGCCAGTTGTTGCTGCAGC+TGG	0.425162	4_4:+78606710	Msa0705800:CDS
TTGAGAAAGTCACGCGCTTA+TGG	0.428624	4_4:+78606779	Msa0705800:CDS
AAATGCTAGTGGTGCGAAAT+CGG	0.431029	4_4:-78605927	None:intergenic
GACACTGTGTTCAGCACAAA+GGG	0.447539	4_4:-78606915	None:intergenic
ATGCAAAGACCCTTGGAGAA+TGG	0.451113	4_4:+78606957	Msa0705800:CDS
GGAAAAGCTAGGAAGGTAAC+TGG	0.463250	4_4:+78607663	Msa0705800:CDS
GTAAAAGGTGGCAATGAGAA+TGG	0.480235	4_4:-78607971	None:intergenic
TGGCAAAACCAAACTGCGCC+TGG	0.483910	4_4:+78608149	Msa0705800:three_prime_UTR
GAGGGAGTATGTAAACATTA+GGG	0.486813	4_4:+78605837	Msa0705800:CDS
CACTAGCATTTGCAGAACTA+GGG	0.506126	4_4:+78605939	Msa0705800:CDS
AATTTGCTTATAATAGTGAC+TGG	0.508617	4_4:+78605815	Msa0705800:CDS
TGTAAACATTAGGGACAGTT+GGG	0.510159	4_4:+78605846	Msa0705800:CDS
CAAGAGTATAAATAGCGAAT+GGG	0.510869	4_4:-78608026	None:intergenic
TAAAAGGTGGCAATGAGAAT+GGG	0.514023	4_4:-78607970	None:intergenic
TTGCAATATGCCTAGATTTG+TGG	0.518317	4_4:+78607853	Msa0705800:three_prime_UTR
TCAAGAGTATAAATAGCGAA+TGG	0.524937	4_4:-78608027	None:intergenic
TTGCTCCTGTGTGGTTGTCA+AGG	0.525394	4_4:+78607686	Msa0705800:CDS
ATTCGCTATTTATACTCTTG+AGG	0.527975	4_4:+78608029	Msa0705800:three_prime_UTR
GTTCCAAATGCAAAGACCCT+TGG	0.532260	4_4:+78606950	Msa0705800:CDS
TTGCTGCAGCTGGAATTCCA+GGG	0.537879	4_4:+78606720	Msa0705800:CDS
ATCAACTTGCAATTATGTCT+GGG	0.539041	4_4:+78606102	Msa0705800:CDS
ATGTAAACATTAGGGACAGT+TGG	0.547737	4_4:+78605845	Msa0705800:CDS
TGCTTATAATAGTGACTGGA+GGG	0.551902	4_4:+78605819	Msa0705800:CDS
TTGTGCAAAATTGATTCAGA+AGG	0.565495	4_4:+78607642	Msa0705800:CDS
ACTGCAGTCATAATATCCAT+TGG	0.568889	4_4:-78606746	None:intergenic
TGCTGCAGCTGGAATTCCAG+GGG	0.575795	4_4:+78606721	Msa0705800:CDS
TTGATTCAGAAGGAAAAGCT+AGG	0.578774	4_4:+78607652	Msa0705800:CDS
ACAGCTCTGTGTTCTTGCTG+AGG	0.587565	4_4:+78606856	Msa0705800:CDS
CCAACCTGATTACGTCAAGT+TGG	0.591510	4_4:+78606886	Msa0705800:CDS
TTACACCAGCCCATTCTCCA+AGG	0.592149	4_4:-78606967	None:intergenic
TTCAGAAGGAAAAGCTAGGA+AGG	0.596975	4_4:+78607656	Msa0705800:CDS
TGGAATTCCAGGGGAGCCAA+TGG	0.602144	4_4:+78606730	Msa0705800:CDS
CCTAGTTCTGCAAATGCTAG+TGG	0.603619	4_4:-78605938	None:intergenic
AGAAAGTCACGCGCTTATGG+TGG	0.613205	4_4:+78606782	Msa0705800:CDS
CCAACTTGACGTAATCAGGT+TGG	0.614249	4_4:-78606886	None:intergenic
AAGACCCTTGGAGAATGGGC+TGG	0.615483	4_4:+78606962	Msa0705800:CDS
TTGCTTATAATAGTGACTGG+AGG	0.620631	4_4:+78605818	Msa0705800:CDS
CAACAAATTCAAGTAAAAGG+TGG	0.621863	4_4:-78607983	None:intergenic
TGACACTGTGTTCAGCACAA+AGG	0.628583	4_4:-78606916	None:intergenic
GCTTATGGTGGTCTTGCACG+TGG	0.635715	4_4:+78606794	Msa0705800:CDS
GGTAACTGGTTGCTCCTGTG+TGG	0.641819	4_4:+78607677	Msa0705800:CDS
TACACCAGCCCATTCTCCAA+GGG	0.643748	4_4:-78606966	None:intergenic
TATAGTCGGCGAGATTCACG+TGG	0.657551	4_4:-78606563	None:intergenic
GGAAACAGATATTTGTAACC+AGG	0.663024	4_4:-78608167	None:intergenic
ACATACCTTGACAACCACAC+AGG	0.682837	4_4:-78607691	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTATAATAACTTTTTGATCT+GGG	-	chr4_4:78606497-78606516	None:intergenic	15.0%
!!!	TTTATAATAACTTTTTGATC+TGG	-	chr4_4:78606498-78606517	None:intergenic	15.0%
!!	AAATATATAATTGAGAATTG+TGG	-	chr4_4:78607048-78607067	None:intergenic	15.0%
!!!	AATTACTTTAAAATAAGTGT+GGG	+	chr4_4:78607083-78607102	Msa0705800:intron	15.0%
!!	TATAAAATGTTATTGCTTAT+TGG	-	chr4_4:78607191-78607210	None:intergenic	15.0%
!!	CATATAGATTAAAATAAATG+AGG	-	chr4_4:78607514-78607533	None:intergenic	15.0%
!!!	TTAACTATTTTCATTTTTGT+AGG	+	chr4_4:78607770-78607789	Msa0705800:intron	15.0%
!!!	TTATAATAACTTTTTGATCT+GGG	-	chr4_4:78606497-78606516	None:intergenic	15.0%
!!!	TTTATAATAACTTTTTGATC+TGG	-	chr4_4:78606498-78606517	None:intergenic	15.0%
!!	AAATATATAATTGAGAATTG+TGG	-	chr4_4:78607048-78607067	None:intergenic	15.0%
!!!	AATTACTTTAAAATAAGTGT+GGG	+	chr4_4:78607083-78607102	Msa0705800:intron	15.0%
!!	TATAAAATGTTATTGCTTAT+TGG	-	chr4_4:78607191-78607210	None:intergenic	15.0%
!!	CATATAGATTAAAATAAATG+AGG	-	chr4_4:78607514-78607533	None:intergenic	15.0%
!!!	TTAACTATTTTCATTTTTGT+AGG	+	chr4_4:78607770-78607789	Msa0705800:intron	15.0%
!!	TAAAAAAACAAAGTGAGATT+TGG	-	chr4_4:78606042-78606061	None:intergenic	20.0%
!!	ATTGATTATGAGGATAATTA+TGG	+	chr4_4:78606445-78606464	Msa0705800:intron	20.0%
!!!	GAATTACTTTAAAATAAGTG+TGG	+	chr4_4:78607082-78607101	Msa0705800:intron	20.0%
!!!	ATTTGCCTTTTGTTTTATAT+TGG	+	chr4_4:78607416-78607435	Msa0705800:intron	20.0%
!!	CAAAACCAATATAAAACAAA+AGG	-	chr4_4:78607424-78607443	None:intergenic	20.0%
!!	AATAGTTAAGCATACATAAA+CGG	-	chr4_4:78607759-78607778	None:intergenic	20.0%
!!!	TTTTCATTTTTGTAGGATTT+CGG	+	chr4_4:78607777-78607796	Msa0705800:intron	20.0%
!!!	CTAGCAGAAATATAAATTTT+AGG	+	chr4_4:78608092-78608111	Msa0705800:three_prime_UTR	20.0%
!!!	AAAGTTATTTACTTTTGAGA+TGG	+	chr4_4:78608129-78608148	Msa0705800:three_prime_UTR	20.0%
!!	TAAAAAAACAAAGTGAGATT+TGG	-	chr4_4:78606042-78606061	None:intergenic	20.0%
!!	ATTGATTATGAGGATAATTA+TGG	+	chr4_4:78606445-78606464	Msa0705800:intron	20.0%
!!!	GAATTACTTTAAAATAAGTG+TGG	+	chr4_4:78607082-78607101	Msa0705800:intron	20.0%
!!!	ATTTGCCTTTTGTTTTATAT+TGG	+	chr4_4:78607416-78607435	Msa0705800:intron	20.0%
!!	CAAAACCAATATAAAACAAA+AGG	-	chr4_4:78607424-78607443	None:intergenic	20.0%
!!	AATAGTTAAGCATACATAAA+CGG	-	chr4_4:78607759-78607778	None:intergenic	20.0%
!!!	TTTTCATTTTTGTAGGATTT+CGG	+	chr4_4:78607777-78607796	Msa0705800:intron	20.0%
!!!	CTAGCAGAAATATAAATTTT+AGG	+	chr4_4:78608092-78608111	Msa0705800:three_prime_UTR	20.0%
!!!	AAAGTTATTTACTTTTGAGA+TGG	+	chr4_4:78608129-78608148	Msa0705800:three_prime_UTR	20.0%
!!	AATTTGCTTATAATAGTGAC+TGG	+	chr4_4:78605815-78605834	Msa0705800:CDS	25.0%
!!!	AGTACTGATATTGAAATAGT+TGG	+	chr4_4:78606289-78606308	Msa0705800:intron	25.0%
!	ACAAAAAGTTTCTCTATAGT+CGG	-	chr4_4:78606580-78606599	None:intergenic	25.0%
!	CTATGTTTATAGTAATGCAA+GGG	-	chr4_4:78606996-78607015	None:intergenic	25.0%
!	TCTATGTTTATAGTAATGCA+AGG	-	chr4_4:78606997-78607016	None:intergenic	25.0%
!	TCAAATATGTCATAAGGAAA+TGG	-	chr4_4:78607025-78607044	None:intergenic	25.0%
!	GACAATAACTTCTGAATTTA+AGG	-	chr4_4:78607549-78607568	None:intergenic	25.0%
!	AAATTCAGAAGTTATTGTCT+TGG	+	chr4_4:78607550-78607569	Msa0705800:intron	25.0%
!	TCTCAACAAATTCAAGTAAA+AGG	-	chr4_4:78607989-78608008	None:intergenic	25.0%
!!	AATTTGCTTATAATAGTGAC+TGG	+	chr4_4:78605815-78605834	Msa0705800:CDS	25.0%
!!!	AGTACTGATATTGAAATAGT+TGG	+	chr4_4:78606289-78606308	Msa0705800:intron	25.0%
!	ACAAAAAGTTTCTCTATAGT+CGG	-	chr4_4:78606580-78606599	None:intergenic	25.0%
!	CTATGTTTATAGTAATGCAA+GGG	-	chr4_4:78606996-78607015	None:intergenic	25.0%
!	TCTATGTTTATAGTAATGCA+AGG	-	chr4_4:78606997-78607016	None:intergenic	25.0%
!	TCAAATATGTCATAAGGAAA+TGG	-	chr4_4:78607025-78607044	None:intergenic	25.0%
!	GACAATAACTTCTGAATTTA+AGG	-	chr4_4:78607549-78607568	None:intergenic	25.0%
!	AAATTCAGAAGTTATTGTCT+TGG	+	chr4_4:78607550-78607569	Msa0705800:intron	25.0%
!	TCTCAACAAATTCAAGTAAA+AGG	-	chr4_4:78607989-78608008	None:intergenic	25.0%
	AAGCTATAAACCCTAATGTT+TGG	-	chr4_4:78605882-78605901	None:intergenic	30.0%
!!!	AATGTTTGTTTTGTGCAGAA+AGG	+	chr4_4:78606061-78606080	Msa0705800:intron	30.0%
	AATCAACTTGCAATTATGTC+TGG	+	chr4_4:78606101-78606120	Msa0705800:CDS	30.0%
	ATCAACTTGCAATTATGTCT+GGG	+	chr4_4:78606102-78606121	Msa0705800:CDS	30.0%
!	TGTGAGATTCTACTTGTTAA+TGG	+	chr4_4:78606154-78606173	Msa0705800:intron	30.0%
	TTTCTTATAGTTACTACCGA+GGG	-	chr4_4:78606330-78606349	None:intergenic	30.0%
	ATTTCTTATAGTTACTACCG+AGG	-	chr4_4:78606331-78606350	None:intergenic	30.0%
!!	AACTTTTTGATCTGGGATTA+AGG	-	chr4_4:78606490-78606509	None:intergenic	30.0%
	TTGTGGTCAAATATGTCATA+AGG	-	chr4_4:78607031-78607050	None:intergenic	30.0%
	CGGTTTCATTAATTGCTTAT+TGG	-	chr4_4:78607164-78607183	None:intergenic	30.0%
!!	AAGGTTGTACACTATTTCTA+TGG	-	chr4_4:78607284-78607303	None:intergenic	30.0%
	TGTTGTTCAGTTATTGTTTC+TGG	+	chr4_4:78607348-78607367	Msa0705800:intron	30.0%
!	AACTTCTGAATTTAAGGCAA+AGG	-	chr4_4:78607543-78607562	None:intergenic	30.0%
!	TTGTGCAAAATTGATTCAGA+AGG	+	chr4_4:78607642-78607661	Msa0705800:CDS	30.0%
	GAATCCAAACATTTCTATTC+CGG	-	chr4_4:78607724-78607743	None:intergenic	30.0%
!	CTTTTTGGATTATCTGCATA+GGG	+	chr4_4:78607925-78607944	Msa0705800:three_prime_UTR	30.0%
	CAACAAATTCAAGTAAAAGG+TGG	-	chr4_4:78607986-78608005	None:intergenic	30.0%
!	CAAGAGTATAAATAGCGAAT+GGG	-	chr4_4:78608029-78608048	None:intergenic	30.0%
!	TCAAGAGTATAAATAGCGAA+TGG	-	chr4_4:78608030-78608049	None:intergenic	30.0%
	ATTCGCTATTTATACTCTTG+AGG	+	chr4_4:78608029-78608048	Msa0705800:three_prime_UTR	30.0%
	TGGTTACAAATATCTGTTTC+CGG	+	chr4_4:78608169-78608188	Msa0705800:three_prime_UTR	30.0%
	AAGCTATAAACCCTAATGTT+TGG	-	chr4_4:78605882-78605901	None:intergenic	30.0%
!!!	AATGTTTGTTTTGTGCAGAA+AGG	+	chr4_4:78606061-78606080	Msa0705800:intron	30.0%
	AATCAACTTGCAATTATGTC+TGG	+	chr4_4:78606101-78606120	Msa0705800:CDS	30.0%
	ATCAACTTGCAATTATGTCT+GGG	+	chr4_4:78606102-78606121	Msa0705800:CDS	30.0%
!	TGTGAGATTCTACTTGTTAA+TGG	+	chr4_4:78606154-78606173	Msa0705800:intron	30.0%
	TTTCTTATAGTTACTACCGA+GGG	-	chr4_4:78606330-78606349	None:intergenic	30.0%
	ATTTCTTATAGTTACTACCG+AGG	-	chr4_4:78606331-78606350	None:intergenic	30.0%
!!	AACTTTTTGATCTGGGATTA+AGG	-	chr4_4:78606490-78606509	None:intergenic	30.0%
	TTGTGGTCAAATATGTCATA+AGG	-	chr4_4:78607031-78607050	None:intergenic	30.0%
	CGGTTTCATTAATTGCTTAT+TGG	-	chr4_4:78607164-78607183	None:intergenic	30.0%
!!	AAGGTTGTACACTATTTCTA+TGG	-	chr4_4:78607284-78607303	None:intergenic	30.0%
	TGTTGTTCAGTTATTGTTTC+TGG	+	chr4_4:78607348-78607367	Msa0705800:intron	30.0%
!	AACTTCTGAATTTAAGGCAA+AGG	-	chr4_4:78607543-78607562	None:intergenic	30.0%
!	TTGTGCAAAATTGATTCAGA+AGG	+	chr4_4:78607642-78607661	Msa0705800:CDS	30.0%
	GAATCCAAACATTTCTATTC+CGG	-	chr4_4:78607724-78607743	None:intergenic	30.0%
!	CTTTTTGGATTATCTGCATA+GGG	+	chr4_4:78607925-78607944	Msa0705800:three_prime_UTR	30.0%
	CAACAAATTCAAGTAAAAGG+TGG	-	chr4_4:78607986-78608005	None:intergenic	30.0%
!	CAAGAGTATAAATAGCGAAT+GGG	-	chr4_4:78608029-78608048	None:intergenic	30.0%
!	TCAAGAGTATAAATAGCGAA+TGG	-	chr4_4:78608030-78608049	None:intergenic	30.0%
	ATTCGCTATTTATACTCTTG+AGG	+	chr4_4:78608029-78608048	Msa0705800:three_prime_UTR	30.0%
	TTGCTTATAATAGTGACTGG+AGG	+	chr4_4:78605818-78605837	Msa0705800:CDS	35.0%
	TGCTTATAATAGTGACTGGA+GGG	+	chr4_4:78605819-78605838	Msa0705800:CDS	35.0%
!	GAGGGAGTATGTAAACATTA+GGG	+	chr4_4:78605837-78605856	Msa0705800:CDS	35.0%
	ATGTAAACATTAGGGACAGT+TGG	+	chr4_4:78605845-78605864	Msa0705800:CDS	35.0%
	TGTAAACATTAGGGACAGTT+GGG	+	chr4_4:78605846-78605865	Msa0705800:CDS	35.0%
!	ACTTTTCACGCCAAACATTA+GGG	+	chr4_4:78605869-78605888	Msa0705800:CDS	35.0%
!	ATTTGCAGAACTAGGGTTTT+CGG	+	chr4_4:78605946-78605965	Msa0705800:CDS	35.0%
	CACAATCGTCTTCAACAAAA+AGG	+	chr4_4:78605972-78605991	Msa0705800:CDS	35.0%
	AAGAGGGATTGATTAAGAGA+AGG	-	chr4_4:78606007-78606026	None:intergenic	35.0%
!	ACAAAGTGAGATTTGGTTGT+GGG	-	chr4_4:78606035-78606054	None:intergenic	35.0%
!	AACAAAGTGAGATTTGGTTG+TGG	-	chr4_4:78606036-78606055	None:intergenic	35.0%
	ACAAGTAGAATCTCACAAAC+AGG	-	chr4_4:78606151-78606170	None:intergenic	35.0%
!	CATTGCGATCATTGATTATG+AGG	+	chr4_4:78606435-78606454	Msa0705800:intron	35.0%
	ATGGTCAAATGAAGCTAATG+AGG	+	chr4_4:78606464-78606483	Msa0705800:intron	35.0%
	ACTGCAGTCATAATATCCAT+TGG	-	chr4_4:78606749-78606768	None:intergenic	35.0%
!	TGTTATTGCTTATTGGTGCT+CGG	-	chr4_4:78607184-78607203	None:intergenic	35.0%
	TCATTTCATGCATCACAGTT+AGG	-	chr4_4:78607249-78607268	None:intergenic	35.0%
!!	ATTGTTTCTGGTGTATTCCT+TGG	+	chr4_4:78607360-78607379	Msa0705800:intron	35.0%
!!	TTGTTTCTGGTGTATTCCTT+GGG	+	chr4_4:78607361-78607380	Msa0705800:intron	35.0%
!	AATTTTGCACAACTGCATGA+AGG	-	chr4_4:78607634-78607653	None:intergenic	35.0%
	TTGATTCAGAAGGAAAAGCT+AGG	+	chr4_4:78607652-78607671	Msa0705800:CDS	35.0%
!	GTCAAGGTATGTTTTTCATC+CGG	+	chr4_4:78607702-78607721	Msa0705800:intron	35.0%
	TCATCCGGAATAGAAATGTT+TGG	+	chr4_4:78607717-78607736	Msa0705800:intron	35.0%
	TTGCAATATGCCTAGATTTG+TGG	+	chr4_4:78607853-78607872	Msa0705800:three_prime_UTR	35.0%
	CCTATGCAGATAATCCAAAA+AGG	-	chr4_4:78607927-78607946	None:intergenic	35.0%
!	CCTTTTTGGATTATCTGCAT+AGG	+	chr4_4:78607924-78607943	Msa0705800:three_prime_UTR	35.0%
!	TATCTGCATAGGGATTTTGA+TGG	+	chr4_4:78607935-78607954	Msa0705800:three_prime_UTR	35.0%
	TAAAAGGTGGCAATGAGAAT+GGG	-	chr4_4:78607973-78607992	None:intergenic	35.0%
	GGAAACAGATATTTGTAACC+AGG	-	chr4_4:78608170-78608189	None:intergenic	35.0%
	TTGCTTATAATAGTGACTGG+AGG	+	chr4_4:78605818-78605837	Msa0705800:CDS	35.0%
	TGCTTATAATAGTGACTGGA+GGG	+	chr4_4:78605819-78605838	Msa0705800:CDS	35.0%
!	GAGGGAGTATGTAAACATTA+GGG	+	chr4_4:78605837-78605856	Msa0705800:CDS	35.0%
	ATGTAAACATTAGGGACAGT+TGG	+	chr4_4:78605845-78605864	Msa0705800:CDS	35.0%
	TGTAAACATTAGGGACAGTT+GGG	+	chr4_4:78605846-78605865	Msa0705800:CDS	35.0%
!	ACTTTTCACGCCAAACATTA+GGG	+	chr4_4:78605869-78605888	Msa0705800:CDS	35.0%
!	ATTTGCAGAACTAGGGTTTT+CGG	+	chr4_4:78605946-78605965	Msa0705800:CDS	35.0%
	CACAATCGTCTTCAACAAAA+AGG	+	chr4_4:78605972-78605991	Msa0705800:CDS	35.0%
	AAGAGGGATTGATTAAGAGA+AGG	-	chr4_4:78606007-78606026	None:intergenic	35.0%
!	ACAAAGTGAGATTTGGTTGT+GGG	-	chr4_4:78606035-78606054	None:intergenic	35.0%
!	AACAAAGTGAGATTTGGTTG+TGG	-	chr4_4:78606036-78606055	None:intergenic	35.0%
	ACAAGTAGAATCTCACAAAC+AGG	-	chr4_4:78606151-78606170	None:intergenic	35.0%
!	CATTGCGATCATTGATTATG+AGG	+	chr4_4:78606435-78606454	Msa0705800:intron	35.0%
	ATGGTCAAATGAAGCTAATG+AGG	+	chr4_4:78606464-78606483	Msa0705800:intron	35.0%
	ACTGCAGTCATAATATCCAT+TGG	-	chr4_4:78606749-78606768	None:intergenic	35.0%
!	TGTTATTGCTTATTGGTGCT+CGG	-	chr4_4:78607184-78607203	None:intergenic	35.0%
	TCATTTCATGCATCACAGTT+AGG	-	chr4_4:78607249-78607268	None:intergenic	35.0%
!!	ATTGTTTCTGGTGTATTCCT+TGG	+	chr4_4:78607360-78607379	Msa0705800:intron	35.0%
!!	TTGTTTCTGGTGTATTCCTT+GGG	+	chr4_4:78607361-78607380	Msa0705800:intron	35.0%
!	AATTTTGCACAACTGCATGA+AGG	-	chr4_4:78607634-78607653	None:intergenic	35.0%
	TTGATTCAGAAGGAAAAGCT+AGG	+	chr4_4:78607652-78607671	Msa0705800:CDS	35.0%
!	GTCAAGGTATGTTTTTCATC+CGG	+	chr4_4:78607702-78607721	Msa0705800:intron	35.0%
	TCATCCGGAATAGAAATGTT+TGG	+	chr4_4:78607717-78607736	Msa0705800:intron	35.0%
	TTGCAATATGCCTAGATTTG+TGG	+	chr4_4:78607853-78607872	Msa0705800:three_prime_UTR	35.0%
	CCTATGCAGATAATCCAAAA+AGG	-	chr4_4:78607927-78607946	None:intergenic	35.0%
!	CCTTTTTGGATTATCTGCAT+AGG	+	chr4_4:78607924-78607943	Msa0705800:three_prime_UTR	35.0%
!	TATCTGCATAGGGATTTTGA+TGG	+	chr4_4:78607935-78607954	Msa0705800:three_prime_UTR	35.0%
	TAAAAGGTGGCAATGAGAAT+GGG	-	chr4_4:78607973-78607992	None:intergenic	35.0%
	GGAAACAGATATTTGTAACC+AGG	-	chr4_4:78608170-78608189	None:intergenic	35.0%
!	GGAGGGAGTATGTAAACATT+AGG	+	chr4_4:78605836-78605855	Msa0705800:CDS	40.0%
!	GACTTTTCACGCCAAACATT+AGG	+	chr4_4:78605868-78605887	Msa0705800:CDS	40.0%
	AAATGCTAGTGGTGCGAAAT+CGG	-	chr4_4:78605930-78605949	None:intergenic	40.0%
	CACTAGCATTTGCAGAACTA+GGG	+	chr4_4:78605939-78605958	Msa0705800:CDS	40.0%
	AAAAACTCAAGACGCACACA+TGG	-	chr4_4:78606617-78606636	None:intergenic	40.0%
	TTCACCAACTTGACGTAATC+AGG	-	chr4_4:78606893-78606912	None:intergenic	40.0%
	ATTGGCACCTCTCATGATTA+GGG	-	chr4_4:78607146-78607165	None:intergenic	40.0%
	TATTGGCACCTCTCATGATT+AGG	-	chr4_4:78607147-78607166	None:intergenic	40.0%
	TTTCATGCATCACAGTTAGG+AGG	-	chr4_4:78607246-78607265	None:intergenic	40.0%
	CAACCTTTGAATGTCAAGAG+CGG	+	chr4_4:78607297-78607316	Msa0705800:intron	40.0%
	TTCAGAAGGAAAAGCTAGGA+AGG	+	chr4_4:78607656-78607675	Msa0705800:CDS	40.0%
!	ATTTTTGTAGGATTTCGGCG+AGG	+	chr4_4:78607782-78607801	Msa0705800:intron	40.0%
	ATTGAGACTGCCACAAATCT+AGG	-	chr4_4:78607866-78607885	None:intergenic	40.0%
!	GATTTTTGCCTTCGCCTTTT+TGG	+	chr4_4:78607910-78607929	Msa0705800:three_prime_UTR	40.0%
	CAGATAATCCAAAAAGGCGA+AGG	-	chr4_4:78607921-78607940	None:intergenic	40.0%
	GTAAAAGGTGGCAATGAGAA+TGG	-	chr4_4:78607974-78607993	None:intergenic	40.0%
!	GGAGGGAGTATGTAAACATT+AGG	+	chr4_4:78605836-78605855	Msa0705800:CDS	40.0%
!	GACTTTTCACGCCAAACATT+AGG	+	chr4_4:78605868-78605887	Msa0705800:CDS	40.0%
	AAATGCTAGTGGTGCGAAAT+CGG	-	chr4_4:78605930-78605949	None:intergenic	40.0%
	CACTAGCATTTGCAGAACTA+GGG	+	chr4_4:78605939-78605958	Msa0705800:CDS	40.0%
	AAAAACTCAAGACGCACACA+TGG	-	chr4_4:78606617-78606636	None:intergenic	40.0%
	TTCACCAACTTGACGTAATC+AGG	-	chr4_4:78606893-78606912	None:intergenic	40.0%
	ATTGGCACCTCTCATGATTA+GGG	-	chr4_4:78607146-78607165	None:intergenic	40.0%
	TATTGGCACCTCTCATGATT+AGG	-	chr4_4:78607147-78607166	None:intergenic	40.0%
	TTTCATGCATCACAGTTAGG+AGG	-	chr4_4:78607246-78607265	None:intergenic	40.0%
	CAACCTTTGAATGTCAAGAG+CGG	+	chr4_4:78607297-78607316	Msa0705800:intron	40.0%
	TTCAGAAGGAAAAGCTAGGA+AGG	+	chr4_4:78607656-78607675	Msa0705800:CDS	40.0%
!	ATTTTTGTAGGATTTCGGCG+AGG	+	chr4_4:78607782-78607801	Msa0705800:intron	40.0%
	ATTGAGACTGCCACAAATCT+AGG	-	chr4_4:78607866-78607885	None:intergenic	40.0%
!	GATTTTTGCCTTCGCCTTTT+TGG	+	chr4_4:78607910-78607929	Msa0705800:three_prime_UTR	40.0%
	CAGATAATCCAAAAAGGCGA+AGG	-	chr4_4:78607921-78607940	None:intergenic	40.0%
	GTAAAAGGTGGCAATGAGAA+TGG	-	chr4_4:78607974-78607993	None:intergenic	40.0%
!!	CCTAGTTCTGCAAATGCTAG+TGG	-	chr4_4:78605941-78605960	None:intergenic	45.0%
	CCACTAGCATTTGCAGAACT+AGG	+	chr4_4:78605938-78605957	Msa0705800:CDS	45.0%
	TTGGTTGTGGGTGATGAAGA+GGG	-	chr4_4:78606023-78606042	None:intergenic	45.0%
	TTTGGTTGTGGGTGATGAAG+AGG	-	chr4_4:78606024-78606043	None:intergenic	45.0%
	GATCTGATAGTCATAGCCCT+CGG	+	chr4_4:78606311-78606330	Msa0705800:intron	45.0%
!!	ATAATATCCATTGGCTCCCC+TGG	-	chr4_4:78606740-78606759	None:intergenic	45.0%
	TTGAGAAAGTCACGCGCTTA+TGG	+	chr4_4:78606779-78606798	Msa0705800:CDS	45.0%
	CCAACTTGACGTAATCAGGT+TGG	-	chr4_4:78606889-78606908	None:intergenic	45.0%
	CCAACCTGATTACGTCAAGT+TGG	+	chr4_4:78606886-78606905	Msa0705800:CDS	45.0%
	GACACTGTGTTCAGCACAAA+GGG	-	chr4_4:78606918-78606937	None:intergenic	45.0%
	TGACACTGTGTTCAGCACAA+AGG	-	chr4_4:78606919-78606938	None:intergenic	45.0%
	GTTCCAAATGCAAAGACCCT+TGG	+	chr4_4:78606950-78606969	Msa0705800:CDS	45.0%
	TCTCCAAGGGTCTTTGCATT+TGG	-	chr4_4:78606956-78606975	None:intergenic	45.0%
	ATGCAAAGACCCTTGGAGAA+TGG	+	chr4_4:78606957-78606976	Msa0705800:CDS	45.0%
	TGCAAAGACCCTTGGAGAAT+GGG	+	chr4_4:78606958-78606977	Msa0705800:CDS	45.0%
	GATTTGCACCACGATGTTGA+GGG	-	chr4_4:78607119-78607138	None:intergenic	45.0%
	ATCCTGACCCTAATCATGAG+AGG	+	chr4_4:78607136-78607155	Msa0705800:intron	45.0%
	AGAGAGGATACAGGGTAAGA+GGG	-	chr4_4:78607480-78607499	None:intergenic	45.0%
	CAGAGTTCAGAGAGGATACA+GGG	-	chr4_4:78607488-78607507	None:intergenic	45.0%
	ACAGAGTTCAGAGAGGATAC+AGG	-	chr4_4:78607489-78607508	None:intergenic	45.0%
	TGAGGTTACAGAGTTCAGAG+AGG	-	chr4_4:78607496-78607515	None:intergenic	45.0%
	GGAAAAGCTAGGAAGGTAAC+TGG	+	chr4_4:78607663-78607682	Msa0705800:CDS	45.0%
	ACATACCTTGACAACCACAC+AGG	-	chr4_4:78607694-78607713	None:intergenic	45.0%
	AAGGCGAAGGCAAAAATCAC+AGG	-	chr4_4:78607908-78607927	None:intergenic	45.0%
	ATTTGTAACCAGGCGCAGTT+TGG	-	chr4_4:78608160-78608179	None:intergenic	45.0%
!!	CCTAGTTCTGCAAATGCTAG+TGG	-	chr4_4:78605941-78605960	None:intergenic	45.0%
	CCACTAGCATTTGCAGAACT+AGG	+	chr4_4:78605938-78605957	Msa0705800:CDS	45.0%
	TTGGTTGTGGGTGATGAAGA+GGG	-	chr4_4:78606023-78606042	None:intergenic	45.0%
	TTTGGTTGTGGGTGATGAAG+AGG	-	chr4_4:78606024-78606043	None:intergenic	45.0%
	GATCTGATAGTCATAGCCCT+CGG	+	chr4_4:78606311-78606330	Msa0705800:intron	45.0%
!!	ATAATATCCATTGGCTCCCC+TGG	-	chr4_4:78606740-78606759	None:intergenic	45.0%
	TTGAGAAAGTCACGCGCTTA+TGG	+	chr4_4:78606779-78606798	Msa0705800:CDS	45.0%
	CCAACTTGACGTAATCAGGT+TGG	-	chr4_4:78606889-78606908	None:intergenic	45.0%
	CCAACCTGATTACGTCAAGT+TGG	+	chr4_4:78606886-78606905	Msa0705800:CDS	45.0%
	GACACTGTGTTCAGCACAAA+GGG	-	chr4_4:78606918-78606937	None:intergenic	45.0%
	TGACACTGTGTTCAGCACAA+AGG	-	chr4_4:78606919-78606938	None:intergenic	45.0%
	GTTCCAAATGCAAAGACCCT+TGG	+	chr4_4:78606950-78606969	Msa0705800:CDS	45.0%
	TCTCCAAGGGTCTTTGCATT+TGG	-	chr4_4:78606956-78606975	None:intergenic	45.0%
	ATGCAAAGACCCTTGGAGAA+TGG	+	chr4_4:78606957-78606976	Msa0705800:CDS	45.0%
	TGCAAAGACCCTTGGAGAAT+GGG	+	chr4_4:78606958-78606977	Msa0705800:CDS	45.0%
	GATTTGCACCACGATGTTGA+GGG	-	chr4_4:78607119-78607138	None:intergenic	45.0%
	ATCCTGACCCTAATCATGAG+AGG	+	chr4_4:78607136-78607155	Msa0705800:intron	45.0%
	AGAGAGGATACAGGGTAAGA+GGG	-	chr4_4:78607480-78607499	None:intergenic	45.0%
	CAGAGTTCAGAGAGGATACA+GGG	-	chr4_4:78607488-78607507	None:intergenic	45.0%
	ACAGAGTTCAGAGAGGATAC+AGG	-	chr4_4:78607489-78607508	None:intergenic	45.0%
	TGAGGTTACAGAGTTCAGAG+AGG	-	chr4_4:78607496-78607515	None:intergenic	45.0%
	GGAAAAGCTAGGAAGGTAAC+TGG	+	chr4_4:78607663-78607682	Msa0705800:CDS	45.0%
	ACATACCTTGACAACCACAC+AGG	-	chr4_4:78607694-78607713	None:intergenic	45.0%
	AAGGCGAAGGCAAAAATCAC+AGG	-	chr4_4:78607908-78607927	None:intergenic	45.0%
	ATTTGTAACCAGGCGCAGTT+TGG	-	chr4_4:78608160-78608179	None:intergenic	45.0%
!!!	AAATTAAAAAATTTAATTTG+TGG	+	chr4_4:78606409-78606428	Msa0705800:intron	5.0%
!!!	AAATTAAAAAATTTAATTTG+TGG	+	chr4_4:78606409-78606428	Msa0705800:intron	5.0%
!	TGCAGAACTAGGGTTTTCGG+CGG	+	chr4_4:78605949-78605968	Msa0705800:CDS	50.0%
	TATAGTCGGCGAGATTCACG+TGG	-	chr4_4:78606566-78606585	None:intergenic	50.0%
	ATTCCAGCTGCAGCAACAAC+TGG	-	chr4_4:78606716-78606735	None:intergenic	50.0%
	TTGCTGCAGCTGGAATTCCA+GGG	+	chr4_4:78606720-78606739	Msa0705800:CDS	50.0%
	AGAAAGTCACGCGCTTATGG+TGG	+	chr4_4:78606782-78606801	Msa0705800:CDS	50.0%
	ACAGCTCTGTGTTCTTGCTG+AGG	+	chr4_4:78606856-78606875	Msa0705800:CDS	50.0%
	TACACCAGCCCATTCTCCAA+GGG	-	chr4_4:78606969-78606988	None:intergenic	50.0%
	TTACACCAGCCCATTCTCCA+AGG	-	chr4_4:78606970-78606989	None:intergenic	50.0%
	TGACATCTCCCTCAACATCG+TGG	+	chr4_4:78607108-78607127	Msa0705800:intron	50.0%
	GGATTTGCACCACGATGTTG+AGG	-	chr4_4:78607120-78607139	None:intergenic	50.0%
	CACCTCTCATGATTAGGGTC+AGG	-	chr4_4:78607141-78607160	None:intergenic	50.0%
	CCACCGCTCTTGACATTCAA+AGG	-	chr4_4:78607303-78607322	None:intergenic	50.0%
	CCTTTGAATGTCAAGAGCGG+TGG	+	chr4_4:78607300-78607319	Msa0705800:intron	50.0%
	TCTGGTGTATTCCTTGGGTC+TGG	+	chr4_4:78607366-78607385	Msa0705800:intron	50.0%
	CTGGTGTATTCCTTGGGTCT+GGG	+	chr4_4:78607367-78607386	Msa0705800:intron	50.0%
	TGGTGTATTCCTTGGGTCTG+GGG	+	chr4_4:78607368-78607387	Msa0705800:intron	50.0%
	GAGAGGATACAGGGTAAGAG+GGG	-	chr4_4:78607479-78607498	None:intergenic	50.0%
	CAGAGAGGATACAGGGTAAG+AGG	-	chr4_4:78607481-78607500	None:intergenic	50.0%
	TTGCTCCTGTGTGGTTGTCA+AGG	+	chr4_4:78607686-78607705	Msa0705800:CDS	50.0%
!	TGCAGAACTAGGGTTTTCGG+CGG	+	chr4_4:78605949-78605968	Msa0705800:CDS	50.0%
	TATAGTCGGCGAGATTCACG+TGG	-	chr4_4:78606566-78606585	None:intergenic	50.0%
	ATTCCAGCTGCAGCAACAAC+TGG	-	chr4_4:78606716-78606735	None:intergenic	50.0%
	TTGCTGCAGCTGGAATTCCA+GGG	+	chr4_4:78606720-78606739	Msa0705800:CDS	50.0%
	AGAAAGTCACGCGCTTATGG+TGG	+	chr4_4:78606782-78606801	Msa0705800:CDS	50.0%
	ACAGCTCTGTGTTCTTGCTG+AGG	+	chr4_4:78606856-78606875	Msa0705800:CDS	50.0%
	TACACCAGCCCATTCTCCAA+GGG	-	chr4_4:78606969-78606988	None:intergenic	50.0%
	TTACACCAGCCCATTCTCCA+AGG	-	chr4_4:78606970-78606989	None:intergenic	50.0%
	TGACATCTCCCTCAACATCG+TGG	+	chr4_4:78607108-78607127	Msa0705800:intron	50.0%
	GGATTTGCACCACGATGTTG+AGG	-	chr4_4:78607120-78607139	None:intergenic	50.0%
	CACCTCTCATGATTAGGGTC+AGG	-	chr4_4:78607141-78607160	None:intergenic	50.0%
	CCACCGCTCTTGACATTCAA+AGG	-	chr4_4:78607303-78607322	None:intergenic	50.0%
	CCTTTGAATGTCAAGAGCGG+TGG	+	chr4_4:78607300-78607319	Msa0705800:intron	50.0%
	TCTGGTGTATTCCTTGGGTC+TGG	+	chr4_4:78607366-78607385	Msa0705800:intron	50.0%
	CTGGTGTATTCCTTGGGTCT+GGG	+	chr4_4:78607367-78607386	Msa0705800:intron	50.0%
	TGGTGTATTCCTTGGGTCTG+GGG	+	chr4_4:78607368-78607387	Msa0705800:intron	50.0%
	GAGAGGATACAGGGTAAGAG+GGG	-	chr4_4:78607479-78607498	None:intergenic	50.0%
	CAGAGAGGATACAGGGTAAG+AGG	-	chr4_4:78607481-78607500	None:intergenic	50.0%
	TTGCTCCTGTGTGGTTGTCA+AGG	+	chr4_4:78607686-78607705	Msa0705800:CDS	50.0%
	GTTGCTGCAGCTGGAATTCC+AGG	+	chr4_4:78606719-78606738	Msa0705800:CDS	55.0%
	TGCTGCAGCTGGAATTCCAG+GGG	+	chr4_4:78606721-78606740	Msa0705800:CDS	55.0%
	TGGAATTCCAGGGGAGCCAA+TGG	+	chr4_4:78606730-78606749	Msa0705800:CDS	55.0%
!	GCTTATGGTGGTCTTGCACG+TGG	+	chr4_4:78606794-78606813	Msa0705800:CDS	55.0%
	AAGACCCTTGGAGAATGGGC+TGG	+	chr4_4:78606962-78606981	Msa0705800:CDS	55.0%
	TGTATTCCTTGGGTCTGGGG+AGG	+	chr4_4:78607371-78607390	Msa0705800:intron	55.0%
	GGTAACTGGTTGCTCCTGTG+TGG	+	chr4_4:78607677-78607696	Msa0705800:CDS	55.0%
	TGGCAAAACCAAACTGCGCC+TGG	+	chr4_4:78608149-78608168	Msa0705800:three_prime_UTR	55.0%
	GTTGCTGCAGCTGGAATTCC+AGG	+	chr4_4:78606719-78606738	Msa0705800:CDS	55.0%
	TGCTGCAGCTGGAATTCCAG+GGG	+	chr4_4:78606721-78606740	Msa0705800:CDS	55.0%
	TGGAATTCCAGGGGAGCCAA+TGG	+	chr4_4:78606730-78606749	Msa0705800:CDS	55.0%
!	GCTTATGGTGGTCTTGCACG+TGG	+	chr4_4:78606794-78606813	Msa0705800:CDS	55.0%
	AAGACCCTTGGAGAATGGGC+TGG	+	chr4_4:78606962-78606981	Msa0705800:CDS	55.0%
	TGTATTCCTTGGGTCTGGGG+AGG	+	chr4_4:78607371-78607390	Msa0705800:intron	55.0%
	GGTAACTGGTTGCTCCTGTG+TGG	+	chr4_4:78607677-78607696	Msa0705800:CDS	55.0%
	TGGCAAAACCAAACTGCGCC+TGG	+	chr4_4:78608149-78608168	Msa0705800:three_prime_UTR	55.0%
	GAGCCAGTTGTTGCTGCAGC+TGG	+	chr4_4:78606710-78606729	Msa0705800:CDS	60.0%
	GAGCCAGTTGTTGCTGCAGC+TGG	+	chr4_4:78606710-78606729	Msa0705800:CDS	60.0%
	TTCCTTGGGTCTGGGGAGGC+TGG	+	chr4_4:78607375-78607394	Msa0705800:intron	65.0%
	AACCAGCCTCCCCAGACCCA+AGG	-	chr4_4:78607380-78607399	None:intergenic	65.0%
!	TGGGTCTGGGGAGGCTGGTT+CGG	+	chr4_4:78607380-78607399	Msa0705800:intron	65.0%
	TTCCTTGGGTCTGGGGAGGC+TGG	+	chr4_4:78607375-78607394	Msa0705800:intron	65.0%
	AACCAGCCTCCCCAGACCCA+AGG	-	chr4_4:78607380-78607399	None:intergenic	65.0%
!	TGGGTCTGGGGAGGCTGGTT+CGG	+	chr4_4:78607380-78607399	Msa0705800:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_4	gene	78605805	78608191	78605805	ID=Msa0705800;Name=Msa0705800
chr4_4	mRNA	78605805	78608191	78605805	ID=Msa0705800-mRNA-1;Parent=Msa0705800;Name=Msa0705800-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0\|0.6\|0.83\|0.83\|0.4\|0.5\|6\|340\|246
chr4_4	exon	78605805	78605993	78605805	ID=Msa0705800-mRNA-1:exon:25103;Parent=Msa0705800-mRNA-1
chr4_4	exon	78606079	78606123	78606079	ID=Msa0705800-mRNA-1:exon:25104;Parent=Msa0705800-mRNA-1
chr4_4	exon	78606537	78606619	78606537	ID=Msa0705800-mRNA-1:exon:25105;Parent=Msa0705800-mRNA-1
chr4_4	exon	78606688	78606985	78606688	ID=Msa0705800-mRNA-1:exon:25106;Parent=Msa0705800-mRNA-1
chr4_4	exon	78607642	78607707	78607642	ID=Msa0705800-mRNA-1:exon:25107;Parent=Msa0705800-mRNA-1
chr4_4	exon	78607792	78608191	78607792	ID=Msa0705800-mRNA-1:exon:25108;Parent=Msa0705800-mRNA-1
chr4_4	CDS	78605805	78605993	78605805	ID=Msa0705800-mRNA-1:cds;Parent=Msa0705800-mRNA-1
chr4_4	CDS	78606079	78606123	78606079	ID=Msa0705800-mRNA-1:cds;Parent=Msa0705800-mRNA-1
chr4_4	CDS	78606537	78606619	78606537	ID=Msa0705800-mRNA-1:cds;Parent=Msa0705800-mRNA-1
chr4_4	CDS	78606688	78606985	78606688	ID=Msa0705800-mRNA-1:cds;Parent=Msa0705800-mRNA-1
chr4_4	CDS	78607642	78607707	78607642	ID=Msa0705800-mRNA-1:cds;Parent=Msa0705800-mRNA-1
chr4_4	CDS	78607792	78607851	78607792	ID=Msa0705800-mRNA-1:cds;Parent=Msa0705800-mRNA-1
chr4_4	three_prime_UTR	78607852	78608191	78607852	ID=Msa0705800-mRNA-1:three_prime_utr;Parent=Msa0705800-mRNA-1

Gene Sequence

>Msa0705800

AAAAAGTTAAAATTTGCTTATAATAGTGACTGGAGGGAGTATGTAAACATTAGGGACAGTTGGGACTTTTCACGCCAAACATTAGGGTTTATAGCTTTTTCTCTTATAAATTGTTTCTTCTGCCGATTTCGCACCACTAGCATTTGCAGAACTAGGGTTTTCGGCGGCACAATCGTCTTCAACAAAAAGAAAGGAACAAGATTCTCTTTGAAATCAACTTGCAATTATGTCTGGACACTTTTCTGTTTCTGTGATTTGAACCACGTGAATCTCGCCGACTATAGAGAAACTTTTTGTTGTGCAATGCTTATCCATGTAGAAGAAGAAGTTGTTGTAGCTGAGCCAGTTGTTGCTGCAGCTGGAATTCCAGGGGAGCCAATGGATATTATGACTGCAGTTCAGCTTGTGTTGAGAAAGTCACGCGCTTATGGTGGTCTTGCACGTGGTCTTCATGAAAGTGCTAAAGTGATTGAGAAGCATGCTGCACAGCTCTGTGTTCTTGCTGAGGATTGTGACCAACCTGATTACGTCAAGTTGGTGAAAGCCCTTTGTGCTGAACACAGTGTCAGTTTGTTGACTGTTCCAAATGCAAAGACCCTTGGAGAATGGGCTGGTTTGTGCAAAATTGATTCAGAAGGAAAAGCTAGGAAGGTAACTGGTTGCTCCTGTGTGGTTGTCAAGGATTTCGGCGAGGAACATGAAGCATACAACGTTGTTCTTCAGCACGTGAAATCTAACTGA

Protein sequence

>Msa0705800

KKLKFAYNSDWREYVNIRDSWDFSRQTLGFIAFSLINCFFCRFRTTSICRTRVFGGTIVFNKKKGTRFSLKSTCNYVWTLFCFCDLNHVNLADYRETFCCAMLIHVEEEVVVAEPVVAAAGIPGEPMDIMTAVQLVLRKSRAYGGLARGLHESAKVIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHSVSLLTVPNAKTLGEWAGLCKIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQHVKSN*