Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1058700 | XP_003623305.1 | 99.239 | 394 | 3 | 0 | 1 | 394 | 1 | 394 | 0.0 | 801 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1058700 | sp|M1CZC0|EBP1_SOLTU | 87.565 | 386 | 47 | 1 | 1 | 385 | 1 | 386 | 0.0 | 675 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1058700 | G7KSA2 | 99.239 | 394 | 3 | 0 | 1 | 394 | 1 | 394 | 0.0 | 801 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0045730 | Msa1058700 | 0.804250 | 2.363838e-49 | -8.615850e-47 |
Msa0070840 | Msa1058700 | 0.805636 | 1.213384e-49 | -8.615850e-47 |
Msa0072570 | Msa1058700 | 0.805581 | 1.245557e-49 | -8.615850e-47 |
Msa0623370 | Msa1058700 | 0.820034 | 8.490033e-53 | -8.615850e-47 |
Msa0643820 | Msa1058700 | 0.814036 | 1.889963e-51 | -8.615850e-47 |
Msa0705800 | Msa1058700 | 0.854494 | 1.186065e-61 | -8.615850e-47 |
Msa0712610 | Msa1058700 | 0.821632 | 3.641824e-53 | -8.615850e-47 |
Msa0781310 | Msa1058700 | 0.804736 | 1.871769e-49 | -8.615850e-47 |
Msa0788380 | Msa1058700 | 0.832852 | 7.460012e-56 | -8.615850e-47 |
Msa0822580 | Msa1058700 | 0.822582 | 2.193625e-53 | -8.615850e-47 |
Msa0138890 | Msa1058700 | 0.801663 | 8.095753e-49 | -8.615850e-47 |
Msa0191450 | Msa1058700 | 0.808686 | 2.741605e-50 | -8.615850e-47 |
Msa0210330 | Msa1058700 | 0.812284 | 4.581181e-51 | -8.615850e-47 |
Msa0210360 | Msa1058700 | 0.806783 | 6.956150e-50 | -8.615850e-47 |
Msa0223440 | Msa1058700 | 0.816906 | 4.342260e-52 | -8.615850e-47 |
Msa0369410 | Msa1058700 | 0.830099 | 3.553084e-55 | -8.615850e-47 |
Msa0426090 | Msa1058700 | 0.802811 | 4.700152e-49 | -8.615850e-47 |
Msa0463520 | Msa1058700 | 0.832908 | 7.227177e-56 | -8.615850e-47 |
Msa0472480 | Msa1058700 | 0.803061 | 4.171774e-49 | -8.615850e-47 |
Msa0481520 | Msa1058700 | 0.820141 | 8.024198e-53 | -8.615850e-47 |
Msa1021120 | Msa1058700 | 0.811109 | 8.250952e-51 | -8.615850e-47 |
Msa1040160 | Msa1058700 | 0.848310 | 6.650738e-60 | -8.615850e-47 |
Msa1042780 | Msa1058700 | 0.831848 | 1.322509e-55 | -8.615850e-47 |
Msa1054280 | Msa1058700 | 0.832069 | 1.166460e-55 | -8.615850e-47 |
Msa1058700 | Msa1082170 | 0.832266 | 1.042979e-55 | -8.615850e-47 |
Msa1058700 | Msa1083370 | 0.849713 | 2.710331e-60 | -8.615850e-47 |
Msa1058700 | Msa1089220 | 0.801230 | 9.931731e-49 | -8.615850e-47 |
Msa1058700 | Msa1115140 | 0.802357 | 5.829282e-49 | -8.615850e-47 |
Msa1058700 | Msa1126520 | 0.824071 | 9.841981e-54 | -8.615850e-47 |
Msa1058700 | Msa1152810 | 0.853103 | 2.980517e-61 | -8.615850e-47 |
Msa1058700 | Msa1167550 | 0.841045 | 6.027697e-58 | -8.615850e-47 |
Msa1058700 | Msa1186030 | 0.851695 | 7.505179e-61 | -8.615850e-47 |
Msa1058700 | Msa1218170 | 0.803166 | 3.969149e-49 | -8.615850e-47 |
Msa1058700 | Msa1240270 | 0.844288 | 8.293870e-59 | -8.615850e-47 |
Msa1058700 | Msa1263620 | 0.813194 | 2.896383e-51 | -8.615850e-47 |
Msa1058700 | Msa1356790 | 0.828584 | 8.288451e-55 | -8.615850e-47 |
Msa1058700 | Msa1374240 | 0.817092 | 3.945765e-52 | -8.615850e-47 |
Msa1058700 | Msa1392590 | 0.825684 | 4.099617e-54 | -8.615850e-47 |
Msa1058700 | Msa1426490 | 0.813236 | 2.834367e-51 | -8.615850e-47 |
Msa0265250 | Msa1058700 | 0.802442 | 5.600561e-49 | -8.615850e-47 |
Msa0297830 | Msa1058700 | 0.832461 | 9.331047e-56 | -8.615850e-47 |
Msa0298870 | Msa1058700 | 0.818657 | 1.748259e-52 | -8.615850e-47 |
Msa0301220 | Msa1058700 | 0.807920 | 3.992613e-50 | -8.615850e-47 |
Msa0335840 | Msa1058700 | 0.835179 | 1.951153e-56 | -8.615850e-47 |
Msa0596370 | Msa1058700 | 0.821616 | 3.673696e-53 | -8.615850e-47 |
Msa0915540 | Msa1058700 | 0.839277 | 1.744681e-57 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1058700 | MtrunA17_Chr7g0242891 | 99.239 | 394 | 3 | 0 | 1 | 394 | 1 | 394 | 0.0 | 801 |
Msa1058700 | MtrunA17_Chr2g0316491 | 85.533 | 394 | 52 | 1 | 1 | 394 | 1 | 389 | 0.0 | 672 |
Msa1058700 | MtrunA17_Chr1g0206751 | 25.301 | 332 | 214 | 8 | 7 | 323 | 20 | 332 | 9.35e-29 | 115 |
Msa1058700 | MtrunA17_Chr4g0061151 | 25.301 | 332 | 214 | 8 | 7 | 323 | 101 | 413 | 2.50e-28 | 115 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1058700 | AT3G51800.3 | 77.635 | 389 | 79 | 2 | 2 | 390 | 3 | 383 | 0.0 | 605 |
Msa1058700 | AT3G51800.1 | 78.663 | 389 | 82 | 1 | 2 | 390 | 3 | 390 | 0.0 | 593 |
Msa1058700 | AT3G51800.2 | 76.884 | 398 | 82 | 2 | 2 | 390 | 3 | 399 | 0.0 | 585 |
Msa1058700 | AT2G44180.1 | 24.925 | 333 | 214 | 9 | 7 | 323 | 117 | 429 | 3.44e-28 | 115 |
Msa1058700 | AT3G59990.4 | 25.602 | 332 | 213 | 8 | 7 | 323 | 115 | 427 | 4.65e-28 | 115 |
Msa1058700 | AT3G59990.3 | 25.602 | 332 | 213 | 8 | 7 | 323 | 115 | 427 | 4.65e-28 | 115 |
Msa1058700 | AT3G59990.1 | 25.602 | 332 | 213 | 8 | 7 | 323 | 115 | 427 | 4.65e-28 | 115 |
Msa1058700 | AT3G59990.2 | 25.602 | 332 | 213 | 8 | 7 | 323 | 115 | 427 | 4.65e-28 | 115 |
Msa1058700 | AT2G44180.2 | 25.155 | 322 | 205 | 9 | 18 | 323 | 8 | 309 | 5.10e-27 | 110 |
Find 108 sgRNAs with CRISPR-Local
Find 336 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCCTTGCAGCCTAAGTTAT+TGG | 0.168042 | 7_2:-43757022 | Msa1058700:intron |
TCTGACACCCCTTTCAGTTT+TGG | 0.255511 | 7_2:-43756087 | Msa1058700:three_prime_UTR |
GGCTTTGAAGTTAGTTATTT+CGG | 0.260686 | 7_2:-43760337 | Msa1058700:CDS |
AGGGTTTGTGAAGTGAAATT+AGG | 0.262873 | 7_2:+43761024 | None:intergenic |
ACCAAAATTCATATCCAAAA+AGG | 0.288538 | 7_2:+43756043 | None:intergenic |
CTTCAGGAAGGTCCGATTAC+TGG | 0.308082 | 7_2:-43759616 | Msa1058700:CDS |
TTCAATGAAGAGGCAAGTTT+TGG | 0.308116 | 7_2:+43761049 | None:intergenic |
CAATTGATTACCTTCTTTCC+TGG | 0.318576 | 7_2:+43759529 | None:intergenic |
TTTCAATGGTTGCAGTGATT+TGG | 0.324960 | 7_2:-43759686 | Msa1058700:intron |
GATTTGGCTTGTCATATAGA+TGG | 0.329871 | 7_2:-43759670 | Msa1058700:CDS |
AATGAAGAGTAATGAAGAAA+TGG | 0.337302 | 7_2:+43760974 | None:intergenic |
GGCTCATACTCATGTTCTTC+AGG | 0.343280 | 7_2:-43759632 | Msa1058700:CDS |
GGGTTTGTGAAGTGAAATTA+GGG | 0.343381 | 7_2:+43761025 | None:intergenic |
TAGAGTTACCTAGCAGAAAA+TGG | 0.347063 | 7_2:+43756889 | None:intergenic |
CTAGCAGAAAATGGCATGAT+TGG | 0.364270 | 7_2:+43756898 | None:intergenic |
AATTAAGTTCAACTATTGTA+TGG | 0.382802 | 7_2:+43755903 | None:intergenic |
AAGAGCTCGCCTTGGTTTAG+TGG | 0.392978 | 7_2:-43756769 | Msa1058700:CDS |
TCCTGGCCTTACAAGCCTTA+AGG | 0.393010 | 7_2:+43759546 | None:intergenic |
ACACTCTTATTATAGGGCTT+TGG | 0.396279 | 7_2:-43756799 | Msa1058700:intron |
GCCTCATTTGTTGAGTCCAC+TGG | 0.400790 | 7_2:+43756178 | None:intergenic |
GTTGTCGAAATTTGCGAGAA+AGG | 0.403274 | 7_2:-43760294 | Msa1058700:CDS |
AAAACAGAAATTGTTATGCT+TGG | 0.409269 | 7_2:-43755966 | Msa1058700:three_prime_UTR |
TTGTATTTGGTTACAACATC+AGG | 0.409580 | 7_2:+43760756 | None:intergenic |
CTCTTATTATAGGGCTTTGG+AGG | 0.414338 | 7_2:-43756796 | Msa1058700:intron |
TCTGCTGCCCGTCCAGTAAT+CGG | 0.414795 | 7_2:+43759604 | None:intergenic |
CTTCTTTGTCTTTGTGCCCA+AGG | 0.418183 | 7_2:+43756468 | None:intergenic |
TTGAAGCAGTTTGTGATTGA+CGG | 0.419108 | 7_2:-43757228 | Msa1058700:CDS |
AGGTTGCCTTAAGGCTTGTA+AGG | 0.421762 | 7_2:-43759552 | Msa1058700:CDS |
CTCGCAAATTTCGACAACCT+TGG | 0.421771 | 7_2:+43760299 | None:intergenic |
TGTGTTGTTAACAGAAATAC+AGG | 0.425225 | 7_2:+43759849 | None:intergenic |
ATTTCGACAACCTTGGCCTT+CGG | 0.443546 | 7_2:+43760306 | None:intergenic |
AGCAGACAACTATTTATAAG+AGG | 0.448471 | 7_2:-43756993 | Msa1058700:CDS |
GGTTGATGATGCAGAGTTTG+AGG | 0.452257 | 7_2:-43757166 | Msa1058700:CDS |
ATGAAGAGTAATGAAGAAAT+GGG | 0.454487 | 7_2:+43760975 | None:intergenic |
ACGGTCTTGTTAATGCCAAA+TGG | 0.460902 | 7_2:-43756574 | Msa1058700:CDS |
GGCTAGCCATGCCTTGATCT+CGG | 0.460904 | 7_2:+43756489 | None:intergenic |
CAATCACAAACTGCTTCAAT+TGG | 0.462473 | 7_2:+43757232 | None:intergenic |
GCATCATCAACCCTTGTATC+CGG | 0.463945 | 7_2:+43757177 | None:intergenic |
ATTGATATAGTGACAAGTAC+TGG | 0.464133 | 7_2:-43757126 | Msa1058700:CDS |
TGTACTTAGTATCTCTAATC+CGG | 0.469904 | 7_2:-43757196 | Msa1058700:CDS |
GTATCTCTAATCCGGATACA+AGG | 0.471369 | 7_2:-43757188 | Msa1058700:CDS |
CTGCTGCTGAGGTTGCCTTA+AGG | 0.471559 | 7_2:-43759561 | Msa1058700:CDS |
GCTAGCCATGCCTTGATCTC+GGG | 0.479085 | 7_2:+43756490 | None:intergenic |
TGTTGCACACATCAAATTCA+CGG | 0.479497 | 7_2:-43756593 | Msa1058700:CDS |
TCACAAACTGCTTCAATTGG+TGG | 0.483001 | 7_2:+43757235 | None:intergenic |
TGAAAGGGAGGAGAAGGAGT+TGG | 0.485440 | 7_2:-43760790 | Msa1058700:CDS |
GATCAAGGCATGGCTAGCCT+TGG | 0.487132 | 7_2:-43756485 | Msa1058700:CDS |
GCCTTAAGGCTTGTAAGGCC+AGG | 0.487319 | 7_2:-43759547 | Msa1058700:CDS |
AACAAATGAGGCCACATCTC+AGG | 0.488049 | 7_2:-43756167 | Msa1058700:CDS |
ATTTGGCTTGTCATATAGAT+GGG | 0.489793 | 7_2:-43759669 | Msa1058700:CDS |
GGATGATGAAAGGGAGGAGA+AGG | 0.490206 | 7_2:-43760796 | Msa1058700:CDS |
GTGACGCGGTCCGATCCATT+TGG | 0.494501 | 7_2:+43756559 | None:intergenic |
TGTATCTGATGCAATTCAAA+AGG | 0.498979 | 7_2:-43757301 | Msa1058700:CDS |
GCTTGTAAGGCCAGGAAAGA+AGG | 0.499294 | 7_2:-43759539 | Msa1058700:intron |
GATAGATGATCCCGAGATCA+AGG | 0.503858 | 7_2:-43756500 | Msa1058700:CDS |
ATCAAGGCATGGCTAGCCTT+GGG | 0.514968 | 7_2:-43756484 | Msa1058700:CDS |
CACCATGTCGGATGATGAAA+GGG | 0.519119 | 7_2:-43760805 | Msa1058700:exon |
CCTGTTCTGCATGAAAAGCC+TGG | 0.520705 | 7_2:-43756714 | Msa1058700:intron |
GGCAAAGATTCGAAGAAATG+AGG | 0.521603 | 7_2:+43761004 | None:intergenic |
GGCTGCAAACACTGCTGCTG+AGG | 0.522569 | 7_2:-43759572 | Msa1058700:CDS |
CACTGGCTAGAGGAGAGAAA+TGG | 0.524226 | 7_2:+43759821 | None:intergenic |
ACAATGTACCAAAACTGAAA+GGG | 0.525017 | 7_2:+43756079 | None:intergenic |
GATGAGACAGTGTTGGAAGA+AGG | 0.526469 | 7_2:-43759799 | Msa1058700:CDS |
GACAGCAGAAGCTGAGCCAG+TGG | 0.530153 | 7_2:-43756194 | Msa1058700:CDS |
GCACCATGTCGGATGATGAA+AGG | 0.530984 | 7_2:-43760806 | Msa1058700:exon |
GTCAATTCATTCCTGAGATG+TGG | 0.541149 | 7_2:+43756156 | None:intergenic |
CTCCCTTTCATCATCCGACA+TGG | 0.542242 | 7_2:+43760803 | None:intergenic |
GGAAGGTCCGATTACTGGAC+GGG | 0.543377 | 7_2:-43759611 | Msa1058700:CDS |
AACAATGTACCAAAACTGAA+AGG | 0.547449 | 7_2:+43756078 | None:intergenic |
TTCCAACACTGTCTCATCAC+TGG | 0.549888 | 7_2:+43759804 | None:intergenic |
TGTTAACAGAAATACAGGTC+GGG | 0.556626 | 7_2:+43759854 | None:intergenic |
GACAAGTACTGGAGAAGGCA+AGG | 0.561868 | 7_2:-43757115 | Msa1058700:intron |
GTGAAGAAGAAGATAGAGAG+AGG | 0.562003 | 7_2:-43759886 | Msa1058700:CDS |
GTGGGCTGCAATTCTTGGAG+TGG | 0.565750 | 7_2:+43756529 | None:intergenic |
AAATTAGGGTTTCAATGAAG+AGG | 0.568419 | 7_2:+43761039 | None:intergenic |
AGATGGGTTCATTGCTGCTG+TGG | 0.571546 | 7_2:-43759653 | Msa1058700:CDS |
GAGGAGAAAAGAGCTCGCCT+TGG | 0.572936 | 7_2:-43756777 | Msa1058700:CDS |
GTTTGTGATTGACGGTAACA+AGG | 0.574284 | 7_2:-43757220 | Msa1058700:CDS |
GCAAAGATTCGAAGAAATGA+GGG | 0.577017 | 7_2:+43761005 | None:intergenic |
AGCCAGTGATGAGACAGTGT+TGG | 0.577721 | 7_2:-43759806 | Msa1058700:CDS |
CTTGTTAATGCCAAATGGAT+CGG | 0.579184 | 7_2:-43756569 | Msa1058700:CDS |
TGCCTATGATTGTAAAATTG+TGG | 0.582084 | 7_2:-43757271 | Msa1058700:CDS |
GGCACAAAGACAAAGAAGAA+AGG | 0.585592 | 7_2:-43756463 | Msa1058700:CDS |
GCAGACAACTATTTATAAGA+GGG | 0.589806 | 7_2:-43756992 | Msa1058700:CDS |
CATACTCATGTTCTTCAGGA+AGG | 0.594553 | 7_2:-43759628 | Msa1058700:CDS |
GCCAGTGGACTCAACAAATG+AGG | 0.599556 | 7_2:-43756179 | Msa1058700:CDS |
AAGACAAAGAAGAAAGGTGG+CGG | 0.600977 | 7_2:-43756457 | Msa1058700:CDS |
ATAGTGACAAGTACTGGAGA+AGG | 0.607460 | 7_2:-43757120 | Msa1058700:CDS |
TTGTTAACAGAAATACAGGT+CGG | 0.613871 | 7_2:+43759853 | None:intergenic |
AGGAAGGTCCGATTACTGGA+CGG | 0.622265 | 7_2:-43759612 | Msa1058700:CDS |
TTCAGGTAAGAAAGAGGACA+AGG | 0.622867 | 7_2:-43756224 | Msa1058700:intron |
CAATGTACCAAAACTGAAAG+GGG | 0.625114 | 7_2:+43756080 | None:intergenic |
GGAATGTAAACCGAAGGCCA+AGG | 0.630468 | 7_2:-43760316 | Msa1058700:CDS |
TATTTCGGAATGTAAACCGA+AGG | 0.632205 | 7_2:-43760322 | Msa1058700:CDS |
ACTTGAAGATGAAAGCATCT+CGG | 0.634545 | 7_2:-43756951 | Msa1058700:CDS |
TATCTCTAATCCGGATACAA+GGG | 0.635855 | 7_2:-43757187 | Msa1058700:CDS |
TGCTTCTCATCCAATAACTT+AGG | 0.637623 | 7_2:+43757012 | None:intergenic |
ACAAAGACAAAGAAGAAAGG+TGG | 0.644797 | 7_2:-43756460 | Msa1058700:CDS |
CATCAAGGATTGAACAAGTG+AGG | 0.646955 | 7_2:-43760828 | Msa1058700:five_prime_UTR |
CTATGATTGTAAAATTGTGG+AGG | 0.650809 | 7_2:-43757268 | Msa1058700:CDS |
ACTGTCTCATCACTGGCTAG+AGG | 0.660835 | 7_2:+43759811 | None:intergenic |
CATGTCGGATGATGAAAGGG+AGG | 0.672723 | 7_2:-43760802 | Msa1058700:CDS |
TATGATTGTAAAATTGTGGA+GGG | 0.685880 | 7_2:-43757267 | Msa1058700:CDS |
ATGATCCCGAGATCAAGGCA+TGG | 0.688022 | 7_2:-43756495 | Msa1058700:CDS |
GAACAAGTGAGGCACCATGT+CGG | 0.693904 | 7_2:-43760817 | Msa1058700:exon |
TCATACATTCCACTAAACCA+AGG | 0.697995 | 7_2:+43756760 | None:intergenic |
ACGGGCAGCAGATGTCATTG+CGG | 0.708638 | 7_2:-43759593 | Msa1058700:CDS |
GGAGTGGATGAGATGTGACG+CGG | 0.801724 | 7_2:+43756545 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTATTTTCTATTCTATA+TGG | - | chr7_2:43756298-43756317 | Msa1058700:intron | 10.0% |
!!! | TTTTATTTTCTATTCTATAT+GGG | - | chr7_2:43756299-43756318 | Msa1058700:intron | 10.0% |
!!! | TTGTTAATTTTACTTATTTT+TGG | - | chr7_2:43756424-43756443 | Msa1058700:intron | 10.0% |
!!! | TACTTTTTACTTATTTTTTT+TGG | - | chr7_2:43756607-43756626 | Msa1058700:intron | 10.0% |
!! | ATAATAATACATATAAATGA+GGG | + | chr7_2:43757492-43757511 | None:intergenic | 10.0% |
!! | TATAATAATACATATAAATG+AGG | + | chr7_2:43757493-43757512 | None:intergenic | 10.0% |
!! | AATTAATATTGAAAAATGAA+GGG | + | chr7_2:43758202-43758221 | None:intergenic | 10.0% |
!! | TAATTAATATTGAAAAATGA+AGG | + | chr7_2:43758203-43758222 | None:intergenic | 10.0% |
!!! | CAAATCAATTTTTTTTTTTA+AGG | + | chr7_2:43758470-43758489 | None:intergenic | 10.0% |
!!! | AGATTAAATATTTTAACATA+AGG | - | chr7_2:43758675-43758694 | Msa1058700:intron | 10.0% |
!!! | GATTAAATATTTTAACATAA+GGG | - | chr7_2:43758676-43758695 | Msa1058700:intron | 10.0% |
!! | ATATGATAAAAATGTAATAT+TGG | - | chr7_2:43758737-43758756 | Msa1058700:intron | 10.0% |
!! | ATATCATAAAACATTAATAT+TGG | - | chr7_2:43759391-43759410 | Msa1058700:intron | 10.0% |
!!! | TTTTGTTTGAATTTTTCATT+TGG | - | chr7_2:43756122-43756141 | Msa1058700:three_prime_UTR | 15.0% |
!!! | TTTGTTTGAATTTTTCATTT+GGG | - | chr7_2:43756123-43756142 | Msa1058700:three_prime_UTR | 15.0% |
!!! | GTTTTTGTTAATTCATAATT+TGG | - | chr7_2:43756321-43756340 | Msa1058700:intron | 15.0% |
!!! | AAATTTATTGAATTTAGCTT+AGG | - | chr7_2:43756350-43756369 | Msa1058700:intron | 15.0% |
!!! | TTTTGTTAATTTTCTTTTCT+CGG | - | chr7_2:43756385-43756404 | Msa1058700:intron | 15.0% |
!!! | TTTTTATTTGCAATTTGAAA+TGG | - | chr7_2:43756462-43756481 | Msa1058700:CDS | 15.0% |
!!! | TTTTATTTGCAATTTGAAAT+GGG | - | chr7_2:43756463-43756482 | Msa1058700:CDS | 15.0% |
!! | GTATAAAGAAATATTGTATT+TGG | - | chr7_2:43756957-43756976 | Msa1058700:CDS | 15.0% |
!! | TTTACTTTATAACATATTTG+TGG | - | chr7_2:43757996-43758015 | Msa1058700:intron | 15.0% |
!! | ATTAATATTGAAAAATGAAG+GGG | + | chr7_2:43758201-43758220 | None:intergenic | 15.0% |
!! | ATATGATAAAACTGTAATAT+TGG | - | chr7_2:43758280-43758299 | Msa1058700:intron | 15.0% |
!!! | TTTTATCATATATAAGTATC+AGG | + | chr7_2:43758728-43758747 | None:intergenic | 15.0% |
!! | TATTAGTTCAATAATTCATA+TGG | + | chr7_2:43759936-43759955 | None:intergenic | 15.0% |
!!! | ATGAAAAACATTTCTTTTTT+GGG | + | chr7_2:43760870-43760889 | None:intergenic | 15.0% |
!!! | AATGAAAAACATTTCTTTTT+TGG | + | chr7_2:43760871-43760890 | None:intergenic | 15.0% |
!!! | TTAAATTCTCGATTAGTTTA+AGG | - | chr7_2:43756539-43756558 | Msa1058700:CDS | 20.0% |
!!! | CTTATGATGTTTTCTTTTAT+TGG | - | chr7_2:43757044-43757063 | Msa1058700:intron | 20.0% |
!! | AGTAGAATAAAATGTACAAA+AGG | + | chr7_2:43757870-43757889 | None:intergenic | 20.0% |
!!! | TTTTATCATATGTAAGTATC+AGG | + | chr7_2:43758271-43758290 | None:intergenic | 20.0% |
!! | AGTAAAATACCAAAATATGT+TGG | + | chr7_2:43758887-43758906 | None:intergenic | 20.0% |
!! | ATGTCATCGTATTTAAAAAA+GGG | + | chr7_2:43759327-43759346 | None:intergenic | 20.0% |
!! | TACAATTACACTCTTATTAT+AGG | - | chr7_2:43760179-43760198 | Msa1058700:intron | 20.0% |
!! | ACAATTACACTCTTATTATA+GGG | - | chr7_2:43760180-43760199 | Msa1058700:intron | 20.0% |
!!! | TTCACTAAATTATACCTTTT+TGG | - | chr7_2:43760928-43760947 | Msa1058700:intron | 20.0% |
! | ATGAAGAGTAATGAAGAAAT+GGG | + | chr7_2:43756013-43756032 | None:intergenic | 25.0% |
! | AATGAAGAGTAATGAAGAAA+TGG | + | chr7_2:43756014-43756033 | None:intergenic | 25.0% |
! | GTATCAAAACAATGAAGAAT+TGG | + | chr7_2:43756072-43756091 | None:intergenic | 25.0% |
!! | AATCAAATTTTTCCCCAATT+GGG | + | chr7_2:43756094-43756113 | None:intergenic | 25.0% |
!! | AAATCAAATTTTTCCCCAAT+TGG | + | chr7_2:43756095-43756114 | None:intergenic | 25.0% |
!!! | ATTTTTCATTTGGGTTTTTC+AGG | - | chr7_2:43756132-43756151 | Msa1058700:three_prime_UTR | 25.0% |
! | ATTTCAATATTTAGCTGTGA+AGG | - | chr7_2:43756844-43756863 | Msa1058700:intron | 25.0% |
! | TGAAATTACAAGAAAGTAAC+TGG | + | chr7_2:43756891-43756910 | None:intergenic | 25.0% |
! | TAATGATGCATTTCTTTCAA+TGG | - | chr7_2:43757285-43757304 | Msa1058700:CDS | 25.0% |
!!! | CAAATATGGCACTTTAAAAT+TGG | - | chr7_2:43757577-43757596 | Msa1058700:intron | 25.0% |
! | TTTAGAGATCAAAATTCACA+AGG | + | chr7_2:43757650-43757669 | None:intergenic | 25.0% |
! | AATGTAACTATGACAAAAAC+AGG | + | chr7_2:43758088-43758107 | None:intergenic | 25.0% |
!! | TTTTGTCATAGTTACATTGA+TGG | - | chr7_2:43758090-43758109 | Msa1058700:intron | 25.0% |
! | ATTGTACATCAGTATAACTA+AGG | + | chr7_2:43758637-43758656 | None:intergenic | 25.0% |
! | AGATTAAATATGATGACATG+AGG | - | chr7_2:43759119-43759138 | Msa1058700:intron | 25.0% |
! | GATTAAATATGATGACATGA+GGG | - | chr7_2:43759120-43759139 | Msa1058700:intron | 25.0% |
! | ATTAAATATGATGACATGAG+GGG | - | chr7_2:43759121-43759140 | Msa1058700:intron | 25.0% |
! | CATGTCATCGTATTTAAAAA+AGG | + | chr7_2:43759328-43759347 | None:intergenic | 25.0% |
! | GTTTAAATATTGTACCATGT+TGG | + | chr7_2:43759538-43759557 | None:intergenic | 25.0% |
! | TATGATTGTAAAATTGTGGA+GGG | - | chr7_2:43759718-43759737 | Msa1058700:intron | 25.0% |
!!! | AATATTTTTTCAGCATGATG+TGG | - | chr7_2:43759908-43759927 | Msa1058700:CDS | 25.0% |
! | AGTGGACATATAATCAAAAT+CGG | + | chr7_2:43760159-43760178 | None:intergenic | 25.0% |
!! | AATAAGAGTGTAATTGTAAG+TGG | + | chr7_2:43760177-43760196 | None:intergenic | 25.0% |
! | TGCATATGATGTAATACTAT+AGG | - | chr7_2:43760702-43760721 | Msa1058700:intron | 25.0% |
!! | ACCTTTTTGGATATGAATTT+TGG | - | chr7_2:43760941-43760960 | Msa1058700:intron | 25.0% |
! | ACCAAAATTCATATCCAAAA+AGG | + | chr7_2:43760945-43760964 | None:intergenic | 25.0% |
! | AAAACAGAAATTGTTATGCT+TGG | - | chr7_2:43761019-43761038 | Msa1058700:five_prime_UTR | 25.0% |
AAATTAGGGTTTCAATGAAG+AGG | + | chr7_2:43755949-43755968 | None:intergenic | 30.0% | |
!! | TAATGAAGAAATGGGTTTTG+CGG | + | chr7_2:43756005-43756024 | None:intergenic | 30.0% |
!!! | TCATTGTTTTGATACCCAAT+TGG | - | chr7_2:43756077-43756096 | Msa1058700:three_prime_UTR | 30.0% |
!!! | CATTGTTTTGATACCCAATT+GGG | - | chr7_2:43756078-43756097 | Msa1058700:three_prime_UTR | 30.0% |
!!! | ATTGTTTTGATACCCAATTG+GGG | - | chr7_2:43756079-43756098 | Msa1058700:three_prime_UTR | 30.0% |
TTGTATTTGGTTACAACATC+AGG | + | chr7_2:43756232-43756251 | None:intergenic | 30.0% | |
!!! | TTCTTTTCTCGGTTAGTTTA+AGG | - | chr7_2:43756396-43756415 | Msa1058700:intron | 30.0% |
!! | GGCTTTGAAGTTAGTTATTT+CGG | - | chr7_2:43756648-43756667 | Msa1058700:intron | 30.0% |
! | GTTTTCTTTTATTGGTGTGA+AGG | - | chr7_2:43757052-43757071 | Msa1058700:intron | 30.0% |
TTGTTAACAGAAATACAGGT+CGG | + | chr7_2:43757135-43757154 | None:intergenic | 30.0% | |
! | TGTGTTGTTAACAGAAATAC+AGG | + | chr7_2:43757139-43757158 | None:intergenic | 30.0% |
!! | ATTTGGCTTGTCATATAGAT+GGG | - | chr7_2:43757316-43757335 | Msa1058700:intron | 30.0% |
! | GTTTGAAGTCAGTTCAAATA+TGG | - | chr7_2:43757563-43757582 | Msa1058700:intron | 30.0% |
ATGAAAACTAATCATGAGCT+AGG | - | chr7_2:43757672-43757691 | Msa1058700:intron | 30.0% | |
ATCATATGTGGTTAAATGGT+TGG | + | chr7_2:43757772-43757791 | None:intergenic | 30.0% | |
AGACATCATATGTGGTTAAA+TGG | + | chr7_2:43757776-43757795 | None:intergenic | 30.0% | |
TTGATAGGAACTGAAAAACT+GGG | + | chr7_2:43757958-43757977 | None:intergenic | 30.0% | |
TTTGATAGGAACTGAAAAAC+TGG | + | chr7_2:43757959-43757978 | None:intergenic | 30.0% | |
!! | CAAAACAAGACAGTTTTGAT+AGG | + | chr7_2:43757973-43757992 | None:intergenic | 30.0% |
!!! | CTATCAAAACTGTCTTGTTT+TGG | - | chr7_2:43757971-43757990 | Msa1058700:intron | 30.0% |
CTATATGATGAATACGTCAT+AGG | - | chr7_2:43758041-43758060 | Msa1058700:intron | 30.0% | |
AAATTGCTTGAAGTATGACA+AGG | + | chr7_2:43758175-43758194 | None:intergenic | 30.0% | |
! | GAAGCTTTATCTTGTCTATT+TGG | - | chr7_2:43758235-43758254 | Msa1058700:intron | 30.0% |
ATATGTAAGTATCAGGATTC+AGG | + | chr7_2:43758264-43758283 | None:intergenic | 30.0% | |
!! | CAATATGATTTTGATCACCT+CGG | + | chr7_2:43758314-43758333 | None:intergenic | 30.0% |
CTATATGATGACTACATCAT+AGG | - | chr7_2:43758502-43758521 | Msa1058700:intron | 30.0% | |
AGTGTAACTATGACATAAAC+AGG | + | chr7_2:43758550-43758569 | None:intergenic | 30.0% | |
TTATGTCATAGTTACACTGA+TGG | - | chr7_2:43758552-43758571 | Msa1058700:intron | 30.0% | |
AGTGGGTATTTATGAAACAA+AGG | + | chr7_2:43758590-43758609 | None:intergenic | 30.0% | |
GAAATAAGAAACACAACCAA+AGG | + | chr7_2:43758615-43758634 | None:intergenic | 30.0% | |
CTATATGATGAATACATCGT+AGG | - | chr7_2:43758944-43758963 | Msa1058700:intron | 30.0% | |
AGTGTAACTATGACATAAAC+AGG | + | chr7_2:43758550-43758569 | None:intergenic | 30.0% | |
AGTGGGTAATTATGAAACAA+AGG | + | chr7_2:43759032-43759051 | None:intergenic | 30.0% | |
CAATAGAAAACACAACCAAT+GGG | + | chr7_2:43759056-43759075 | None:intergenic | 30.0% | |
TCAATAGAAAACACAACCAA+TGG | + | chr7_2:43759057-43759076 | None:intergenic | 30.0% | |
TTGTGTAAAATAACAGGGTA+AGG | - | chr7_2:43759218-43759237 | Msa1058700:intron | 30.0% | |
TACAATACACCAATAATGGT+GGG | - | chr7_2:43759246-43759265 | Msa1058700:intron | 30.0% | |
CGTATTTAAAAAAGGGCAAA+GGG | + | chr7_2:43759320-43759339 | None:intergenic | 30.0% | |
TCGTATTTAAAAAAGGGCAA+AGG | + | chr7_2:43759321-43759340 | None:intergenic | 30.0% | |
!! | ATTTTCTAGTATAGCCAACA+TGG | - | chr7_2:43758410-43758429 | Msa1058700:intron | 30.0% |
AAATTTCCTGAGTTGTAGTA+GGG | - | chr7_2:43759620-43759639 | Msa1058700:CDS | 30.0% | |
! | ATACTTTTCTTGACAGAACA+AGG | - | chr7_2:43759660-43759679 | Msa1058700:CDS | 30.0% |
TGTATCTGATGCAATTCAAA+AGG | - | chr7_2:43759684-43759703 | Msa1058700:intron | 30.0% | |
TGCCTATGATTGTAAAATTG+TGG | - | chr7_2:43759714-43759733 | Msa1058700:intron | 30.0% | |
! | CTCCACAATTTTACAATCAT+AGG | + | chr7_2:43759719-43759738 | None:intergenic | 30.0% |
CTATGATTGTAAAATTGTGG+AGG | - | chr7_2:43759717-43759736 | Msa1058700:intron | 30.0% | |
TGTACTTAGTATCTCTAATC+CGG | - | chr7_2:43759789-43759808 | Msa1058700:CDS | 30.0% | |
ATTGATATAGTGACAAGTAC+TGG | - | chr7_2:43759859-43759878 | Msa1058700:CDS | 30.0% | |
AGCAGACAACTATTTATAAG+AGG | - | chr7_2:43759992-43760011 | Msa1058700:intron | 30.0% | |
GCAGACAACTATTTATAAGA+GGG | - | chr7_2:43759993-43760012 | Msa1058700:intron | 30.0% | |
! | ATGGCATGATTGGAAATTTT+TGG | + | chr7_2:43760080-43760099 | None:intergenic | 30.0% |
! | AAGCCTGGTAATTTTTCTAT+AGG | - | chr7_2:43760286-43760305 | Msa1058700:CDS | 30.0% |
TTGCCTATAGAAAAATTACC+AGG | + | chr7_2:43760292-43760311 | None:intergenic | 30.0% | |
AACAGTATAGCAAGAAGTTT+AGG | + | chr7_2:43760355-43760374 | None:intergenic | 30.0% | |
TAAATACAAAAGCGACATGA+TGG | + | chr7_2:43760637-43760656 | None:intergenic | 30.0% | |
! | TTTTTGTTCAGGTAAGAAAG+AGG | - | chr7_2:43760755-43760774 | Msa1058700:CDS | 30.0% |
!!! | CATTTCTTTTTTGGGATTGA+GGG | + | chr7_2:43760862-43760881 | None:intergenic | 30.0% |
!!! | ACATTTCTTTTTTGGGATTG+AGG | + | chr7_2:43760863-43760882 | None:intergenic | 30.0% |
ACAATGTACCAAAACTGAAA+GGG | + | chr7_2:43760909-43760928 | None:intergenic | 30.0% | |
AACAATGTACCAAAACTGAA+AGG | + | chr7_2:43760910-43760929 | None:intergenic | 30.0% | |
!!! | AGGCAAGTTTTGGCTTATAT+AGG | + | chr7_2:43755929-43755948 | None:intergenic | 35.0% |
! | TTCAATGAAGAGGCAAGTTT+TGG | + | chr7_2:43755939-43755958 | None:intergenic | 35.0% |
GGGTTTGTGAAGTGAAATTA+GGG | + | chr7_2:43755963-43755982 | None:intergenic | 35.0% | |
AGGGTTTGTGAAGTGAAATT+AGG | + | chr7_2:43755964-43755983 | None:intergenic | 35.0% | |
GCAAAGATTCGAAGAAATGA+GGG | + | chr7_2:43755983-43756002 | None:intergenic | 35.0% | |
!! | TGGATTTGTTTGTTATGCAG+AGG | - | chr7_2:43756627-43756646 | Msa1058700:intron | 35.0% |
TATTTCGGAATGTAAACCGA+AGG | - | chr7_2:43756663-43756682 | Msa1058700:intron | 35.0% | |
TGTTAACAGAAATACAGGTC+GGG | + | chr7_2:43757134-43757153 | None:intergenic | 35.0% | |
TTTCAATGGTTGCAGTGATT+TGG | - | chr7_2:43757299-43757318 | Msa1058700:CDS | 35.0% | |
!! | GATTTGGCTTGTCATATAGA+TGG | - | chr7_2:43757315-43757334 | Msa1058700:intron | 35.0% |
CAATTGATTACCTTCTTTCC+TGG | + | chr7_2:43757459-43757478 | None:intergenic | 35.0% | |
ATATTGCTCCACATGTAGAT+AGG | - | chr7_2:43757541-43757560 | Msa1058700:intron | 35.0% | |
ACTTCAAACCTATCTACATG+TGG | + | chr7_2:43757552-43757571 | None:intergenic | 35.0% | |
! | ACTTTGTTTGTTGCATCTGA+AGG | - | chr7_2:43757614-43757633 | Msa1058700:intron | 35.0% |
! | CTTTGTTTGTTGCATCTGAA+GGG | - | chr7_2:43757615-43757634 | Msa1058700:intron | 35.0% |
GATCAAAATTCACAAGGCAA+AGG | + | chr7_2:43757644-43757663 | None:intergenic | 35.0% | |
AGCTAGGATAAAATCCAATG+AGG | - | chr7_2:43757688-43757707 | Msa1058700:intron | 35.0% | |
CTATGACAATAAAGCCTCAT+TGG | + | chr7_2:43757705-43757724 | None:intergenic | 35.0% | |
TGTCATAGTTACACTGATAG+AGG | - | chr7_2:43757717-43757736 | Msa1058700:intron | 35.0% | |
ACAAGCAAAGACATCATATG+TGG | + | chr7_2:43757784-43757803 | None:intergenic | 35.0% | |
TGATAGGAACTGAAAAACTG+GGG | + | chr7_2:43757957-43757976 | None:intergenic | 35.0% | |
ATGACAAAAACAGGCTTCAT+TGG | + | chr7_2:43758079-43758098 | None:intergenic | 35.0% | |
ATGACATAAACAGGCTTCAT+TGG | + | chr7_2:43758541-43758560 | None:intergenic | 35.0% | |
CATAAATACCCACTTTCCTT+TGG | - | chr7_2:43758596-43758615 | Msa1058700:intron | 35.0% | |
AAACACAACCAAAGGAAAGT+GGG | + | chr7_2:43758607-43758626 | None:intergenic | 35.0% | |
!!! | CAATATGGTTTTGATCACCT+CGG | + | chr7_2:43758771-43758790 | None:intergenic | 35.0% |
GGAAAAAGAGGAAACCAATA+TGG | + | chr7_2:43758786-43758805 | None:intergenic | 35.0% | |
ATGACATAAACAGGCTTCAT+TGG | + | chr7_2:43758541-43758560 | None:intergenic | 35.0% | |
AGCCTCTTGTGTAAAATAAC+AGG | - | chr7_2:43759212-43759231 | Msa1058700:intron | 35.0% | |
GCCTCTTGTGTAAAATAACA+GGG | - | chr7_2:43759213-43759232 | Msa1058700:intron | 35.0% | |
!!! | ACCCTGTTATTTTACACAAG+AGG | + | chr7_2:43759217-43759236 | None:intergenic | 35.0% |
TGCGTACAATACACCAATAA+TGG | - | chr7_2:43759242-43759261 | Msa1058700:intron | 35.0% | |
GTACAATACACCAATAATGG+TGG | - | chr7_2:43759245-43759264 | Msa1058700:intron | 35.0% | |
CAATATGGTTATGATCACCT+CGG | + | chr7_2:43759425-43759444 | None:intergenic | 35.0% | |
GGAAAAAGAGGAAACCAATA+TGG | + | chr7_2:43758786-43758805 | None:intergenic | 35.0% | |
CAAATTTCCTGAGTTGTAGT+AGG | - | chr7_2:43759619-43759638 | Msa1058700:CDS | 35.0% | |
CAATCACAAACTGCTTCAAT+TGG | + | chr7_2:43759756-43759775 | None:intergenic | 35.0% | |
TTGAAGCAGTTTGTGATTGA+CGG | - | chr7_2:43759757-43759776 | Msa1058700:intron | 35.0% | |
TATCTCTAATCCGGATACAA+GGG | - | chr7_2:43759798-43759817 | Msa1058700:CDS | 35.0% | |
TGCTTCTCATCCAATAACTT+AGG | + | chr7_2:43759976-43759995 | None:intergenic | 35.0% | |
!! | ACTTGAAGATGAAAGCATCT+CGG | - | chr7_2:43760034-43760053 | Msa1058700:intron | 35.0% |
TAGAGTTACCTAGCAGAAAA+TGG | + | chr7_2:43760099-43760118 | None:intergenic | 35.0% | |
ACACTCTTATTATAGGGCTT+TGG | - | chr7_2:43760186-43760205 | Msa1058700:intron | 35.0% | |
TCATACATTCCACTAAACCA+AGG | + | chr7_2:43760228-43760247 | None:intergenic | 35.0% | |
! | TTTTCATGCAGAACAGGATA+TGG | + | chr7_2:43760268-43760287 | None:intergenic | 35.0% |
AACATGAACAGTTCCACAAT+TGG | - | chr7_2:43760313-43760332 | Msa1058700:CDS | 35.0% | |
ACATGAACAGTTCCACAATT+GGG | - | chr7_2:43760314-43760333 | Msa1058700:CDS | 35.0% | |
TGCTATACTGTTTCCTTATC+AGG | - | chr7_2:43760363-43760382 | Msa1058700:intron | 35.0% | |
TGCAACAAAATCACCTGATA+AGG | + | chr7_2:43760379-43760398 | None:intergenic | 35.0% | |
TGTTGCACACATCAAATTCA+CGG | - | chr7_2:43760392-43760411 | Msa1058700:intron | 35.0% | |
CTTGTTAATGCCAAATGGAT+CGG | - | chr7_2:43760416-43760435 | Msa1058700:intron | 35.0% | |
!! | GGATCATCTATCGTTTTTGT+GGG | + | chr7_2:43760477-43760496 | None:intergenic | 35.0% |
ACAAAGACAAAGAAGAAAGG+TGG | - | chr7_2:43760525-43760544 | Msa1058700:intron | 35.0% | |
AAGAAGAAAAAAGGTAGGCT+TGG | - | chr7_2:43760552-43760571 | Msa1058700:intron | 35.0% | |
! | CGACATGATGGAACAAAAAT+AGG | + | chr7_2:43760625-43760644 | None:intergenic | 35.0% |
!! | CATATGCTTTCTGAAATGCA+TGG | - | chr7_2:43760675-43760694 | Msa1058700:intron | 35.0% |
!! | GATGCTTTGTGTTTTTGTTC+AGG | - | chr7_2:43760744-43760763 | Msa1058700:CDS | 35.0% |
CAATGTACCAAAACTGAAAG+GGG | + | chr7_2:43760908-43760927 | None:intergenic | 35.0% | |
GGCAAAGATTCGAAGAAATG+AGG | + | chr7_2:43755984-43756003 | None:intergenic | 40.0% | |
CATCAAGGATTGAACAAGTG+AGG | - | chr7_2:43756157-43756176 | Msa1058700:exon | 40.0% | |
!! | CTCAGCTGCAGTTTTGTATT+TGG | + | chr7_2:43756245-43756264 | None:intergenic | 40.0% |
GTTGTCGAAATTTGCGAGAA+AGG | - | chr7_2:43756691-43756710 | Msa1058700:intron | 40.0% | |
GTGAAGAAGAAGATAGAGAG+AGG | - | chr7_2:43757099-43757118 | Msa1058700:intron | 40.0% | |
!!! | CTAGTTTTGTGATTACCCTG+TGG | - | chr7_2:43757238-43757257 | Msa1058700:CDS | 40.0% |
TTGTGATTACCCTGTGGTTT+CGG | - | chr7_2:43757244-43757263 | Msa1058700:CDS | 40.0% | |
AAATGATAGCCGAAACCACA+GGG | + | chr7_2:43757256-43757275 | None:intergenic | 40.0% | |
CATACTCATGTTCTTCAGGA+AGG | - | chr7_2:43757357-43757376 | Msa1058700:intron | 40.0% | |
ACACTGATAGAGGTCATTTG+TGG | - | chr7_2:43757727-43757746 | Msa1058700:intron | 40.0% | |
AACTACACATTTCAGCTGAG+AGG | + | chr7_2:43757807-43757826 | None:intergenic | 40.0% | |
TGATGAATACGTCATAGGCT+AGG | - | chr7_2:43758046-43758065 | Msa1058700:intron | 40.0% | |
AATAAATACCCATATCCCCG+TGG | - | chr7_2:43758134-43758153 | Msa1058700:intron | 40.0% | |
TAATATTGGCATCTTTGCCG+AGG | - | chr7_2:43758294-43758313 | Msa1058700:intron | 40.0% | |
GATGACTACATCATAGGCTA+TGG | - | chr7_2:43758508-43758527 | Msa1058700:intron | 40.0% | |
GAAACACAACCAAAGGAAAG+TGG | + | chr7_2:43758608-43758627 | None:intergenic | 40.0% | |
TAATATTGGCAACTTTGCCG+AGG | - | chr7_2:43758751-43758770 | Msa1058700:intron | 40.0% | |
CGAGGTGATCAAAACCATAT+TGG | - | chr7_2:43758769-43758788 | Msa1058700:intron | 40.0% | |
! | TTTTGGCAACAGGGAAAAAG+AGG | + | chr7_2:43758798-43758817 | None:intergenic | 40.0% |
!! | CCATTCAAGTTTTGGCAACA+GGG | + | chr7_2:43758807-43758826 | None:intergenic | 40.0% |
!! | AGTTCCAGCCATTCAAGTTT+TGG | + | chr7_2:43758815-43758834 | None:intergenic | 40.0% |
! | CTAGTGCAGCCAACATATTT+TGG | - | chr7_2:43758875-43758894 | Msa1058700:intron | 40.0% |
GATGAATACATCGTAGGCTA+TGG | - | chr7_2:43758950-43758969 | Msa1058700:intron | 40.0% | |
CATAATTACCCACTTCCCAT+TGG | - | chr7_2:43759038-43759057 | Msa1058700:intron | 40.0% | |
AAACACAACCAATGGGAAGT+GGG | + | chr7_2:43759049-43759068 | None:intergenic | 40.0% | |
AAAACACAACCAATGGGAAG+TGG | + | chr7_2:43759050-43759069 | None:intergenic | 40.0% | |
AAAAACCTTGAAGCACGACA+AGG | + | chr7_2:43759080-43759099 | None:intergenic | 40.0% | |
GTTCTTGTCATGTGACTGAA+AGG | - | chr7_2:43759166-43759185 | Msa1058700:intron | 40.0% | |
GTCATGTGACTGAAAGGTTA+CGG | - | chr7_2:43759172-43759191 | Msa1058700:intron | 40.0% | |
TCATGTGACTGAAAGGTTAC+GGG | - | chr7_2:43759173-43759192 | Msa1058700:intron | 40.0% | |
TAATATTGGCAACTTTGCCG+AGG | - | chr7_2:43758751-43758770 | Msa1058700:intron | 40.0% | |
CGAGGTGATCATAACCATAT+TGG | - | chr7_2:43759423-43759442 | Msa1058700:intron | 40.0% | |
! | AGTTCCAGCCATTCAAGTTT+CGG | + | chr7_2:43758815-43758834 | None:intergenic | 40.0% |
AATACACCCTACTACAACTC+AGG | + | chr7_2:43759629-43759648 | None:intergenic | 40.0% | |
TCACAAACTGCTTCAATTGG+TGG | + | chr7_2:43759753-43759772 | None:intergenic | 40.0% | |
GTTTGTGATTGACGGTAACA+AGG | - | chr7_2:43759765-43759784 | Msa1058700:intron | 40.0% | |
GTATCTCTAATCCGGATACA+AGG | - | chr7_2:43759797-43759816 | Msa1058700:CDS | 40.0% | |
!! | ATAGTGACAAGTACTGGAGA+AGG | - | chr7_2:43759865-43759884 | Msa1058700:CDS | 40.0% |
TCCAATAACTTAGGCTGCAA+GGG | + | chr7_2:43759967-43759986 | None:intergenic | 40.0% | |
ATCCAATAACTTAGGCTGCA+AGG | + | chr7_2:43759968-43759987 | None:intergenic | 40.0% | |
CTAGCAGAAAATGGCATGAT+TGG | + | chr7_2:43760090-43760109 | None:intergenic | 40.0% | |
!!! | CAATCATGCCATTTTCTGCT+AGG | - | chr7_2:43760088-43760107 | Msa1058700:intron | 40.0% |
! | CTCTTATTATAGGGCTTTGG+AGG | - | chr7_2:43760189-43760208 | Msa1058700:intron | 40.0% |
ATAGGAACACAACCCAATTG+TGG | + | chr7_2:43760329-43760348 | None:intergenic | 40.0% | |
AGCAAGAAGTTTAGGCTCAT+AGG | + | chr7_2:43760347-43760366 | None:intergenic | 40.0% | |
!! | ACGGTCTTGTTAATGCCAAA+TGG | - | chr7_2:43760411-43760430 | Msa1058700:intron | 40.0% |
!! | TTTTTGTGGGCTGCAATTCT+TGG | + | chr7_2:43760464-43760483 | None:intergenic | 40.0% |
!! | GGGATCATCTATCGTTTTTG+TGG | + | chr7_2:43760478-43760497 | None:intergenic | 40.0% |
GGCACAAAGACAAAGAAGAA+AGG | - | chr7_2:43760522-43760541 | Msa1058700:intron | 40.0% | |
AAGACAAAGAAGAAAGGTGG+CGG | - | chr7_2:43760528-43760547 | Msa1058700:intron | 40.0% | |
GCGGAAAGAAGAAAAAAGGT+AGG | - | chr7_2:43760547-43760566 | Msa1058700:intron | 40.0% | |
TTCAGGTAAGAAAGAGGACA+AGG | - | chr7_2:43760761-43760780 | Msa1058700:CDS | 40.0% | |
GTCAATTCATTCCTGAGATG+TGG | + | chr7_2:43760832-43760851 | None:intergenic | 40.0% | |
!!! | TTTTTTGGGATTGAGGGTGA+GGG | + | chr7_2:43760856-43760875 | None:intergenic | 40.0% |
!!! | TGGGTTTTTCAGGAGCATCA+AGG | - | chr7_2:43756142-43756161 | Msa1058700:three_prime_UTR | 45.0% |
CACCATGTCGGATGATGAAA+GGG | - | chr7_2:43756180-43756199 | Msa1058700:CDS | 45.0% | |
! | ATTTCGACAACCTTGGCCTT+CGG | + | chr7_2:43756682-43756701 | None:intergenic | 45.0% |
CTCGCAAATTTCGACAACCT+TGG | + | chr7_2:43756689-43756708 | None:intergenic | 45.0% | |
AACTAGTATCCTCTCACGTG+CGG | - | chr7_2:43756752-43756771 | Msa1058700:CDS | 45.0% | |
TTCCAACACTGTCTCATCAC+TGG | + | chr7_2:43757184-43757203 | None:intergenic | 45.0% | |
! | GATGAGACAGTGTTGGAAGA+AGG | - | chr7_2:43757186-43757205 | Msa1058700:CDS | 45.0% |
CAAATGATAGCCGAAACCAC+AGG | + | chr7_2:43757257-43757276 | None:intergenic | 45.0% | |
GGCTCATACTCATGTTCTTC+AGG | - | chr7_2:43757353-43757372 | Msa1058700:intron | 45.0% | |
AGGTTGCCTTAAGGCTTGTA+AGG | - | chr7_2:43757433-43757452 | Msa1058700:intron | 45.0% | |
ATGTGGTTAAATGGTTGGCG+CGG | + | chr7_2:43757767-43757786 | None:intergenic | 45.0% | |
TCAATAAAGACGCAACCACG+GGG | + | chr7_2:43758152-43758171 | None:intergenic | 45.0% | |
GTCAATAAAGACGCAACCAC+GGG | + | chr7_2:43758153-43758172 | None:intergenic | 45.0% | |
GGTCAATAAAGACGCAACCA+CGG | + | chr7_2:43758154-43758173 | None:intergenic | 45.0% | |
TTTCGGCAACAGGGAAAAAG+AGG | + | chr7_2:43758341-43758360 | None:intergenic | 45.0% | |
! | CCATTCAAGTTTCGGCAACA+GGG | + | chr7_2:43758350-43758369 | None:intergenic | 45.0% |
TTGCCGAAACTTGAATGGCT+GGG | - | chr7_2:43758352-43758371 | Msa1058700:intron | 45.0% | |
! | AGTCCCAGCCATTCAAGTTT+CGG | + | chr7_2:43758358-43758377 | None:intergenic | 45.0% |
CCCTGTTGCCAAAACTTGAA+TGG | - | chr7_2:43758804-43758823 | Msa1058700:intron | 45.0% | |
!! | GCCATTCAAGTTTTGGCAAC+AGG | + | chr7_2:43758808-43758827 | None:intergenic | 45.0% |
GTTGCCAAAACTTGAATGGC+TGG | - | chr7_2:43758808-43758827 | Msa1058700:intron | 45.0% | |
ATTGACCTTGTCGTGCTTCA+AGG | - | chr7_2:43759072-43759091 | Msa1058700:intron | 45.0% | |
GAACTTTACCAGTTGCGCTA+AGG | + | chr7_2:43759150-43759169 | None:intergenic | 45.0% | |
! | TTACACAAGAGGCTGTTTCC+AGG | + | chr7_2:43759206-43759225 | None:intergenic | 45.0% |
TTTCGGCAACAGGGAAAAAG+AGG | + | chr7_2:43758341-43758360 | None:intergenic | 45.0% | |
! | CCATTCAAGTTTCGGCAACA+GGG | + | chr7_2:43758350-43758369 | None:intergenic | 45.0% |
GAAACTTGAATGGCTGGAAC+TGG | - | chr7_2:43759468-43759487 | Msa1058700:intron | 45.0% | |
GCATCATCAACCCTTGTATC+CGG | + | chr7_2:43759811-43759830 | None:intergenic | 45.0% | |
!! | GGTTGATGATGCAGAGTTTG+AGG | - | chr7_2:43759819-43759838 | Msa1058700:CDS | 45.0% |
TCCCTTGCAGCCTAAGTTAT+TGG | - | chr7_2:43759963-43759982 | Msa1058700:intron | 45.0% | |
GATAGATGATCCCGAGATCA+AGG | - | chr7_2:43760485-43760504 | Msa1058700:intron | 45.0% | |
CTTCTTTGTCTTTGTGCCCA+AGG | + | chr7_2:43760520-43760539 | None:intergenic | 45.0% | |
!! | GGTGGCGGAAAGAAGAAAAA+AGG | - | chr7_2:43760543-43760562 | Msa1058700:intron | 45.0% |
AACAAATGAGGCCACATCTC+AGG | - | chr7_2:43760818-43760837 | Msa1058700:exon | 45.0% | |
!!! | CTTTTTTGGGATTGAGGGTG+AGG | + | chr7_2:43760857-43760876 | None:intergenic | 45.0% |
! | TCTGACACCCCTTTCAGTTT+TGG | - | chr7_2:43760898-43760917 | Msa1058700:intron | 45.0% |
!!! | TTTTGTTAATATTATTTAAA+TGG | - | chr7_2:43757014-43757033 | Msa1058700:CDS | 5.0% |
!! | TAAAAAAAAAAAAAAAATGT+TGG | + | chr7_2:43758427-43758446 | None:intergenic | 5.0% |
! | GAACAAGTGAGGCACCATGT+CGG | - | chr7_2:43756168-43756187 | Msa1058700:CDS | 50.0% |
GCACCATGTCGGATGATGAA+AGG | - | chr7_2:43756179-43756198 | Msa1058700:CDS | 50.0% | |
CTCCCTTTCATCATCCGACA+TGG | + | chr7_2:43756185-43756204 | None:intergenic | 50.0% | |
CATGTCGGATGATGAAAGGG+AGG | - | chr7_2:43756183-43756202 | Msa1058700:CDS | 50.0% | |
GGATGATGAAAGGGAGGAGA+AGG | - | chr7_2:43756189-43756208 | Msa1058700:CDS | 50.0% | |
TGAAAGGGAGGAGAAGGAGT+TGG | - | chr7_2:43756195-43756214 | Msa1058700:CDS | 50.0% | |
GGAATGTAAACCGAAGGCCA+AGG | - | chr7_2:43756669-43756688 | Msa1058700:intron | 50.0% | |
TAATGTATGCCGCACGTGAG+AGG | + | chr7_2:43756764-43756783 | None:intergenic | 50.0% | |
! | CACTGGCTAGAGGAGAGAAA+TGG | + | chr7_2:43757167-43757186 | None:intergenic | 50.0% |
! | ACTGTCTCATCACTGGCTAG+AGG | + | chr7_2:43757177-43757196 | None:intergenic | 50.0% |
AGCCAGTGATGAGACAGTGT+TGG | - | chr7_2:43757179-43757198 | Msa1058700:CDS | 50.0% | |
! | AGATGGGTTCATTGCTGCTG+TGG | - | chr7_2:43757332-43757351 | Msa1058700:intron | 50.0% |
CTTCAGGAAGGTCCGATTAC+TGG | - | chr7_2:43757369-43757388 | Msa1058700:intron | 50.0% | |
AGGAAGGTCCGATTACTGGA+CGG | - | chr7_2:43757373-43757392 | Msa1058700:intron | 50.0% | |
!! | TCCTGGCCTTACAAGCCTTA+AGG | + | chr7_2:43757442-43757461 | None:intergenic | 50.0% |
GCTTGTAAGGCCAGGAAAGA+AGG | - | chr7_2:43757446-43757465 | Msa1058700:intron | 50.0% | |
CCCTGTTGCCGAAACTTGAA+TGG | - | chr7_2:43758347-43758366 | Msa1058700:intron | 50.0% | |
! | GCCATTCAAGTTTCGGCAAC+AGG | + | chr7_2:43758351-43758370 | None:intergenic | 50.0% |
GTTGCCGAAACTTGAATGGC+TGG | - | chr7_2:43758351-43758370 | Msa1058700:intron | 50.0% | |
AAGGTTACGGGTTCAAGTCC+TGG | - | chr7_2:43759185-43759204 | Msa1058700:intron | 50.0% | |
AAAAAGGGCAAAGGGCAACC+CGG | + | chr7_2:43759312-43759331 | None:intergenic | 50.0% | |
CCCTGTTGCCGAAACTTGAA+TGG | - | chr7_2:43758347-43758366 | Msa1058700:intron | 50.0% | |
! | GCCATTCAAGTTTCGGCAAC+AGG | + | chr7_2:43758351-43758370 | None:intergenic | 50.0% |
GTTGCCGAAACTTGAATGGC+TGG | - | chr7_2:43758351-43758370 | Msa1058700:intron | 50.0% | |
!! | GACAAGTACTGGAGAAGGCA+AGG | - | chr7_2:43759870-43759889 | Msa1058700:CDS | 50.0% |
! | AGTACTGGAGAAGGCAAGGT+AGG | - | chr7_2:43759874-43759893 | Msa1058700:CDS | 50.0% |
AAGAGCTCGCCTTGGTTTAG+TGG | - | chr7_2:43760216-43760235 | Msa1058700:intron | 50.0% | |
! | CCAGGCTTTTCATGCAGAAC+AGG | + | chr7_2:43760274-43760293 | None:intergenic | 50.0% |
CCTGTTCTGCATGAAAAGCC+TGG | - | chr7_2:43760271-43760290 | Msa1058700:intron | 50.0% | |
ATGATCCCGAGATCAAGGCA+TGG | - | chr7_2:43760490-43760509 | Msa1058700:intron | 50.0% | |
!! | ATCAAGGCATGGCTAGCCTT+GGG | - | chr7_2:43760501-43760520 | Msa1058700:intron | 50.0% |
! | GCCAGTGGACTCAACAAATG+AGG | - | chr7_2:43760806-43760825 | Msa1058700:exon | 50.0% |
! | GCCTCATTTGTTGAGTCCAC+TGG | + | chr7_2:43760810-43760829 | None:intergenic | 50.0% |
GGAAGGTCCGATTACTGGAC+GGG | - | chr7_2:43757374-43757393 | Msa1058700:intron | 55.0% | |
TCTGCTGCCCGTCCAGTAAT+CGG | + | chr7_2:43757384-43757403 | None:intergenic | 55.0% | |
ACGGGCAGCAGATGTCATTG+CGG | - | chr7_2:43757392-43757411 | Msa1058700:intron | 55.0% | |
CTGCTGCTGAGGTTGCCTTA+AGG | - | chr7_2:43757424-43757443 | Msa1058700:intron | 55.0% | |
GCCTTAAGGCTTGTAAGGCC+AGG | - | chr7_2:43757438-43757457 | Msa1058700:intron | 55.0% | |
AGACGCAACCACGGGGATAT+GGG | + | chr7_2:43758145-43758164 | None:intergenic | 55.0% | |
AAGACGCAACCACGGGGATA+TGG | + | chr7_2:43758146-43758165 | None:intergenic | 55.0% | |
AGGGGTAACCTTAGCGCAAC+TGG | - | chr7_2:43759139-43759158 | Msa1058700:intron | 55.0% | |
GGAAGGGGTCCCACCATTAT+TGG | + | chr7_2:43759258-43759277 | None:intergenic | 55.0% | |
! | ATAATGGTGGGACCCCTTCC+TGG | - | chr7_2:43759258-43759277 | Msa1058700:intron | 55.0% |
CTAAAGCTCCCGCATACGCA+GGG | + | chr7_2:43759285-43759304 | None:intergenic | 55.0% | |
ACTAAAGCTCCCGCATACGC+AGG | + | chr7_2:43759286-43759305 | None:intergenic | 55.0% | |
! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr7_2:43759290-43759309 | Msa1058700:intron | 55.0% |
GAGGAGAAAAGAGCTCGCCT+TGG | - | chr7_2:43760208-43760227 | Msa1058700:intron | 55.0% | |
GGAGTGGATGAGATGTGACG+CGG | + | chr7_2:43760443-43760462 | None:intergenic | 55.0% | |
! | GTGGGCTGCAATTCTTGGAG+TGG | + | chr7_2:43760459-43760478 | None:intergenic | 55.0% |
GCTAGCCATGCCTTGATCTC+GGG | + | chr7_2:43760498-43760517 | None:intergenic | 55.0% | |
! | GGCTAGCCATGCCTTGATCT+CGG | + | chr7_2:43760499-43760518 | None:intergenic | 55.0% |
!! | GATCAAGGCATGGCTAGCCT+TGG | - | chr7_2:43760500-43760519 | Msa1058700:intron | 55.0% |
GGCTGCAAACACTGCTGCTG+AGG | - | chr7_2:43757413-43757432 | Msa1058700:intron | 60.0% | |
CATACGCAGGGTCCAGGAAG+GGG | + | chr7_2:43759273-43759292 | None:intergenic | 60.0% | |
GCATACGCAGGGTCCAGGAA+GGG | + | chr7_2:43759274-43759293 | None:intergenic | 60.0% | |
CTTCCTGGACCCTGCGTATG+CGG | - | chr7_2:43759273-43759292 | Msa1058700:intron | 60.0% | |
TTCCTGGACCCTGCGTATGC+GGG | - | chr7_2:43759274-43759293 | Msa1058700:intron | 60.0% | |
! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr7_2:43759291-43759310 | Msa1058700:intron | 60.0% |
GTGACGCGGTCCGATCCATT+TGG | + | chr7_2:43760429-43760448 | None:intergenic | 60.0% | |
GACAGCAGAAGCTGAGCCAG+TGG | - | chr7_2:43760791-43760810 | Msa1058700:CDS | 60.0% | |
CGCATACGCAGGGTCCAGGA+AGG | + | chr7_2:43759275-43759294 | None:intergenic | 65.0% | |
CTCCCGCATACGCAGGGTCC+AGG | + | chr7_2:43759279-43759298 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_2 | gene | 43755912 | 43761095 | 43755912 | ID=Msa1058700;Name=Msa1058700 |
chr7_2 | mRNA | 43755912 | 43761095 | 43755912 | ID=Msa1058700-mRNA-1;Parent=Msa1058700;Name=Msa1058700-mRNA-1;_AED=0.06;_eAED=0.06;_QI=175|1|1|1|0.88|0.8|10|250|394 |
chr7_2 | exon | 43755912 | 43756241 | 43755912 | ID=Msa1058700-mRNA-1:exon:7923;Parent=Msa1058700-mRNA-1 |
chr7_2 | exon | 43756443 | 43756622 | 43756443 | ID=Msa1058700-mRNA-1:exon:7922;Parent=Msa1058700-mRNA-1 |
chr7_2 | exon | 43756715 | 43756806 | 43756715 | ID=Msa1058700-mRNA-1:exon:7921;Parent=Msa1058700-mRNA-1 |
chr7_2 | exon | 43756898 | 43757034 | 43756898 | ID=Msa1058700-mRNA-1:exon:7920;Parent=Msa1058700-mRNA-1 |
chr7_2 | exon | 43757116 | 43757331 | 43757116 | ID=Msa1058700-mRNA-1:exon:7919;Parent=Msa1058700-mRNA-1 |
chr7_2 | exon | 43759540 | 43759693 | 43759540 | ID=Msa1058700-mRNA-1:exon:7918;Parent=Msa1058700-mRNA-1 |
chr7_2 | exon | 43759784 | 43759933 | 43759784 | ID=Msa1058700-mRNA-1:exon:7917;Parent=Msa1058700-mRNA-1 |
chr7_2 | exon | 43760276 | 43760360 | 43760276 | ID=Msa1058700-mRNA-1:exon:7916;Parent=Msa1058700-mRNA-1 |
chr7_2 | exon | 43760733 | 43760853 | 43760733 | ID=Msa1058700-mRNA-1:exon:7915;Parent=Msa1058700-mRNA-1 |
chr7_2 | exon | 43760951 | 43761095 | 43760951 | ID=Msa1058700-mRNA-1:exon:7914;Parent=Msa1058700-mRNA-1 |
chr7_2 | five_prime_UTR | 43760951 | 43761095 | 43760951 | ID=Msa1058700-mRNA-1:five_prime_utr;Parent=Msa1058700-mRNA-1 |
chr7_2 | five_prime_UTR | 43760824 | 43760853 | 43760824 | ID=Msa1058700-mRNA-1:five_prime_utr;Parent=Msa1058700-mRNA-1 |
chr7_2 | CDS | 43760733 | 43760823 | 43760733 | ID=Msa1058700-mRNA-1:cds;Parent=Msa1058700-mRNA-1 |
chr7_2 | CDS | 43760276 | 43760360 | 43760276 | ID=Msa1058700-mRNA-1:cds;Parent=Msa1058700-mRNA-1 |
chr7_2 | CDS | 43759784 | 43759933 | 43759784 | ID=Msa1058700-mRNA-1:cds;Parent=Msa1058700-mRNA-1 |
chr7_2 | CDS | 43759540 | 43759693 | 43759540 | ID=Msa1058700-mRNA-1:cds;Parent=Msa1058700-mRNA-1 |
chr7_2 | CDS | 43757116 | 43757331 | 43757116 | ID=Msa1058700-mRNA-1:cds;Parent=Msa1058700-mRNA-1 |
chr7_2 | CDS | 43756898 | 43757034 | 43756898 | ID=Msa1058700-mRNA-1:cds;Parent=Msa1058700-mRNA-1 |
chr7_2 | CDS | 43756715 | 43756806 | 43756715 | ID=Msa1058700-mRNA-1:cds;Parent=Msa1058700-mRNA-1 |
chr7_2 | CDS | 43756443 | 43756622 | 43756443 | ID=Msa1058700-mRNA-1:cds;Parent=Msa1058700-mRNA-1 |
chr7_2 | CDS | 43756162 | 43756241 | 43756162 | ID=Msa1058700-mRNA-1:cds;Parent=Msa1058700-mRNA-1 |
chr7_2 | three_prime_UTR | 43755912 | 43756161 | 43755912 | ID=Msa1058700-mRNA-1:three_prime_utr;Parent=Msa1058700-mRNA-1 |
Gene Sequence |
Protein sequence |