AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1058700


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1058700 MtrunA17_Chr7g0242891 99.239 394 3 0 1 394 1 394 0.0 801
Msa1058700 MtrunA17_Chr2g0316491 85.533 394 52 1 1 394 1 389 0.0 672
Msa1058700 MtrunA17_Chr1g0206751 25.301 332 214 8 7 323 20 332 9.35e-29 115
Msa1058700 MtrunA17_Chr4g0061151 25.301 332 214 8 7 323 101 413 2.50e-28 115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1058700 AT3G51800.3 77.635 389 79 2 2 390 3 383 0.0 605
Msa1058700 AT3G51800.1 78.663 389 82 1 2 390 3 390 0.0 593
Msa1058700 AT3G51800.2 76.884 398 82 2 2 390 3 399 0.0 585
Msa1058700 AT2G44180.1 24.925 333 214 9 7 323 117 429 3.44e-28 115
Msa1058700 AT3G59990.4 25.602 332 213 8 7 323 115 427 4.65e-28 115
Msa1058700 AT3G59990.3 25.602 332 213 8 7 323 115 427 4.65e-28 115
Msa1058700 AT3G59990.1 25.602 332 213 8 7 323 115 427 4.65e-28 115
Msa1058700 AT3G59990.2 25.602 332 213 8 7 323 115 427 4.65e-28 115
Msa1058700 AT2G44180.2 25.155 322 205 9 18 323 8 309 5.10e-27 110

Find 108 sgRNAs with CRISPR-Local

Find 336 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCTTGCAGCCTAAGTTAT+TGG 0.168042 7_2:-43757022 Msa1058700:intron
TCTGACACCCCTTTCAGTTT+TGG 0.255511 7_2:-43756087 Msa1058700:three_prime_UTR
GGCTTTGAAGTTAGTTATTT+CGG 0.260686 7_2:-43760337 Msa1058700:CDS
AGGGTTTGTGAAGTGAAATT+AGG 0.262873 7_2:+43761024 None:intergenic
ACCAAAATTCATATCCAAAA+AGG 0.288538 7_2:+43756043 None:intergenic
CTTCAGGAAGGTCCGATTAC+TGG 0.308082 7_2:-43759616 Msa1058700:CDS
TTCAATGAAGAGGCAAGTTT+TGG 0.308116 7_2:+43761049 None:intergenic
CAATTGATTACCTTCTTTCC+TGG 0.318576 7_2:+43759529 None:intergenic
TTTCAATGGTTGCAGTGATT+TGG 0.324960 7_2:-43759686 Msa1058700:intron
GATTTGGCTTGTCATATAGA+TGG 0.329871 7_2:-43759670 Msa1058700:CDS
AATGAAGAGTAATGAAGAAA+TGG 0.337302 7_2:+43760974 None:intergenic
GGCTCATACTCATGTTCTTC+AGG 0.343280 7_2:-43759632 Msa1058700:CDS
GGGTTTGTGAAGTGAAATTA+GGG 0.343381 7_2:+43761025 None:intergenic
TAGAGTTACCTAGCAGAAAA+TGG 0.347063 7_2:+43756889 None:intergenic
CTAGCAGAAAATGGCATGAT+TGG 0.364270 7_2:+43756898 None:intergenic
AATTAAGTTCAACTATTGTA+TGG 0.382802 7_2:+43755903 None:intergenic
AAGAGCTCGCCTTGGTTTAG+TGG 0.392978 7_2:-43756769 Msa1058700:CDS
TCCTGGCCTTACAAGCCTTA+AGG 0.393010 7_2:+43759546 None:intergenic
ACACTCTTATTATAGGGCTT+TGG 0.396279 7_2:-43756799 Msa1058700:intron
GCCTCATTTGTTGAGTCCAC+TGG 0.400790 7_2:+43756178 None:intergenic
GTTGTCGAAATTTGCGAGAA+AGG 0.403274 7_2:-43760294 Msa1058700:CDS
AAAACAGAAATTGTTATGCT+TGG 0.409269 7_2:-43755966 Msa1058700:three_prime_UTR
TTGTATTTGGTTACAACATC+AGG 0.409580 7_2:+43760756 None:intergenic
CTCTTATTATAGGGCTTTGG+AGG 0.414338 7_2:-43756796 Msa1058700:intron
TCTGCTGCCCGTCCAGTAAT+CGG 0.414795 7_2:+43759604 None:intergenic
CTTCTTTGTCTTTGTGCCCA+AGG 0.418183 7_2:+43756468 None:intergenic
TTGAAGCAGTTTGTGATTGA+CGG 0.419108 7_2:-43757228 Msa1058700:CDS
AGGTTGCCTTAAGGCTTGTA+AGG 0.421762 7_2:-43759552 Msa1058700:CDS
CTCGCAAATTTCGACAACCT+TGG 0.421771 7_2:+43760299 None:intergenic
TGTGTTGTTAACAGAAATAC+AGG 0.425225 7_2:+43759849 None:intergenic
ATTTCGACAACCTTGGCCTT+CGG 0.443546 7_2:+43760306 None:intergenic
AGCAGACAACTATTTATAAG+AGG 0.448471 7_2:-43756993 Msa1058700:CDS
GGTTGATGATGCAGAGTTTG+AGG 0.452257 7_2:-43757166 Msa1058700:CDS
ATGAAGAGTAATGAAGAAAT+GGG 0.454487 7_2:+43760975 None:intergenic
ACGGTCTTGTTAATGCCAAA+TGG 0.460902 7_2:-43756574 Msa1058700:CDS
GGCTAGCCATGCCTTGATCT+CGG 0.460904 7_2:+43756489 None:intergenic
CAATCACAAACTGCTTCAAT+TGG 0.462473 7_2:+43757232 None:intergenic
GCATCATCAACCCTTGTATC+CGG 0.463945 7_2:+43757177 None:intergenic
ATTGATATAGTGACAAGTAC+TGG 0.464133 7_2:-43757126 Msa1058700:CDS
TGTACTTAGTATCTCTAATC+CGG 0.469904 7_2:-43757196 Msa1058700:CDS
GTATCTCTAATCCGGATACA+AGG 0.471369 7_2:-43757188 Msa1058700:CDS
CTGCTGCTGAGGTTGCCTTA+AGG 0.471559 7_2:-43759561 Msa1058700:CDS
GCTAGCCATGCCTTGATCTC+GGG 0.479085 7_2:+43756490 None:intergenic
TGTTGCACACATCAAATTCA+CGG 0.479497 7_2:-43756593 Msa1058700:CDS
TCACAAACTGCTTCAATTGG+TGG 0.483001 7_2:+43757235 None:intergenic
TGAAAGGGAGGAGAAGGAGT+TGG 0.485440 7_2:-43760790 Msa1058700:CDS
GATCAAGGCATGGCTAGCCT+TGG 0.487132 7_2:-43756485 Msa1058700:CDS
GCCTTAAGGCTTGTAAGGCC+AGG 0.487319 7_2:-43759547 Msa1058700:CDS
AACAAATGAGGCCACATCTC+AGG 0.488049 7_2:-43756167 Msa1058700:CDS
ATTTGGCTTGTCATATAGAT+GGG 0.489793 7_2:-43759669 Msa1058700:CDS
GGATGATGAAAGGGAGGAGA+AGG 0.490206 7_2:-43760796 Msa1058700:CDS
GTGACGCGGTCCGATCCATT+TGG 0.494501 7_2:+43756559 None:intergenic
TGTATCTGATGCAATTCAAA+AGG 0.498979 7_2:-43757301 Msa1058700:CDS
GCTTGTAAGGCCAGGAAAGA+AGG 0.499294 7_2:-43759539 Msa1058700:intron
GATAGATGATCCCGAGATCA+AGG 0.503858 7_2:-43756500 Msa1058700:CDS
ATCAAGGCATGGCTAGCCTT+GGG 0.514968 7_2:-43756484 Msa1058700:CDS
CACCATGTCGGATGATGAAA+GGG 0.519119 7_2:-43760805 Msa1058700:exon
CCTGTTCTGCATGAAAAGCC+TGG 0.520705 7_2:-43756714 Msa1058700:intron
GGCAAAGATTCGAAGAAATG+AGG 0.521603 7_2:+43761004 None:intergenic
GGCTGCAAACACTGCTGCTG+AGG 0.522569 7_2:-43759572 Msa1058700:CDS
CACTGGCTAGAGGAGAGAAA+TGG 0.524226 7_2:+43759821 None:intergenic
ACAATGTACCAAAACTGAAA+GGG 0.525017 7_2:+43756079 None:intergenic
GATGAGACAGTGTTGGAAGA+AGG 0.526469 7_2:-43759799 Msa1058700:CDS
GACAGCAGAAGCTGAGCCAG+TGG 0.530153 7_2:-43756194 Msa1058700:CDS
GCACCATGTCGGATGATGAA+AGG 0.530984 7_2:-43760806 Msa1058700:exon
GTCAATTCATTCCTGAGATG+TGG 0.541149 7_2:+43756156 None:intergenic
CTCCCTTTCATCATCCGACA+TGG 0.542242 7_2:+43760803 None:intergenic
GGAAGGTCCGATTACTGGAC+GGG 0.543377 7_2:-43759611 Msa1058700:CDS
AACAATGTACCAAAACTGAA+AGG 0.547449 7_2:+43756078 None:intergenic
TTCCAACACTGTCTCATCAC+TGG 0.549888 7_2:+43759804 None:intergenic
TGTTAACAGAAATACAGGTC+GGG 0.556626 7_2:+43759854 None:intergenic
GACAAGTACTGGAGAAGGCA+AGG 0.561868 7_2:-43757115 Msa1058700:intron
GTGAAGAAGAAGATAGAGAG+AGG 0.562003 7_2:-43759886 Msa1058700:CDS
GTGGGCTGCAATTCTTGGAG+TGG 0.565750 7_2:+43756529 None:intergenic
AAATTAGGGTTTCAATGAAG+AGG 0.568419 7_2:+43761039 None:intergenic
AGATGGGTTCATTGCTGCTG+TGG 0.571546 7_2:-43759653 Msa1058700:CDS
GAGGAGAAAAGAGCTCGCCT+TGG 0.572936 7_2:-43756777 Msa1058700:CDS
GTTTGTGATTGACGGTAACA+AGG 0.574284 7_2:-43757220 Msa1058700:CDS
GCAAAGATTCGAAGAAATGA+GGG 0.577017 7_2:+43761005 None:intergenic
AGCCAGTGATGAGACAGTGT+TGG 0.577721 7_2:-43759806 Msa1058700:CDS
CTTGTTAATGCCAAATGGAT+CGG 0.579184 7_2:-43756569 Msa1058700:CDS
TGCCTATGATTGTAAAATTG+TGG 0.582084 7_2:-43757271 Msa1058700:CDS
GGCACAAAGACAAAGAAGAA+AGG 0.585592 7_2:-43756463 Msa1058700:CDS
GCAGACAACTATTTATAAGA+GGG 0.589806 7_2:-43756992 Msa1058700:CDS
CATACTCATGTTCTTCAGGA+AGG 0.594553 7_2:-43759628 Msa1058700:CDS
GCCAGTGGACTCAACAAATG+AGG 0.599556 7_2:-43756179 Msa1058700:CDS
AAGACAAAGAAGAAAGGTGG+CGG 0.600977 7_2:-43756457 Msa1058700:CDS
ATAGTGACAAGTACTGGAGA+AGG 0.607460 7_2:-43757120 Msa1058700:CDS
TTGTTAACAGAAATACAGGT+CGG 0.613871 7_2:+43759853 None:intergenic
AGGAAGGTCCGATTACTGGA+CGG 0.622265 7_2:-43759612 Msa1058700:CDS
TTCAGGTAAGAAAGAGGACA+AGG 0.622867 7_2:-43756224 Msa1058700:intron
CAATGTACCAAAACTGAAAG+GGG 0.625114 7_2:+43756080 None:intergenic
GGAATGTAAACCGAAGGCCA+AGG 0.630468 7_2:-43760316 Msa1058700:CDS
TATTTCGGAATGTAAACCGA+AGG 0.632205 7_2:-43760322 Msa1058700:CDS
ACTTGAAGATGAAAGCATCT+CGG 0.634545 7_2:-43756951 Msa1058700:CDS
TATCTCTAATCCGGATACAA+GGG 0.635855 7_2:-43757187 Msa1058700:CDS
TGCTTCTCATCCAATAACTT+AGG 0.637623 7_2:+43757012 None:intergenic
ACAAAGACAAAGAAGAAAGG+TGG 0.644797 7_2:-43756460 Msa1058700:CDS
CATCAAGGATTGAACAAGTG+AGG 0.646955 7_2:-43760828 Msa1058700:five_prime_UTR
CTATGATTGTAAAATTGTGG+AGG 0.650809 7_2:-43757268 Msa1058700:CDS
ACTGTCTCATCACTGGCTAG+AGG 0.660835 7_2:+43759811 None:intergenic
CATGTCGGATGATGAAAGGG+AGG 0.672723 7_2:-43760802 Msa1058700:CDS
TATGATTGTAAAATTGTGGA+GGG 0.685880 7_2:-43757267 Msa1058700:CDS
ATGATCCCGAGATCAAGGCA+TGG 0.688022 7_2:-43756495 Msa1058700:CDS
GAACAAGTGAGGCACCATGT+CGG 0.693904 7_2:-43760817 Msa1058700:exon
TCATACATTCCACTAAACCA+AGG 0.697995 7_2:+43756760 None:intergenic
ACGGGCAGCAGATGTCATTG+CGG 0.708638 7_2:-43759593 Msa1058700:CDS
GGAGTGGATGAGATGTGACG+CGG 0.801724 7_2:+43756545 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATTTTCTATTCTATA+TGG - chr7_2:43756298-43756317 Msa1058700:intron 10.0%
!!! TTTTATTTTCTATTCTATAT+GGG - chr7_2:43756299-43756318 Msa1058700:intron 10.0%
!!! TTGTTAATTTTACTTATTTT+TGG - chr7_2:43756424-43756443 Msa1058700:intron 10.0%
!!! TACTTTTTACTTATTTTTTT+TGG - chr7_2:43756607-43756626 Msa1058700:intron 10.0%
!! ATAATAATACATATAAATGA+GGG + chr7_2:43757492-43757511 None:intergenic 10.0%
!! TATAATAATACATATAAATG+AGG + chr7_2:43757493-43757512 None:intergenic 10.0%
!! AATTAATATTGAAAAATGAA+GGG + chr7_2:43758202-43758221 None:intergenic 10.0%
!! TAATTAATATTGAAAAATGA+AGG + chr7_2:43758203-43758222 None:intergenic 10.0%
!!! CAAATCAATTTTTTTTTTTA+AGG + chr7_2:43758470-43758489 None:intergenic 10.0%
!!! AGATTAAATATTTTAACATA+AGG - chr7_2:43758675-43758694 Msa1058700:intron 10.0%
!!! GATTAAATATTTTAACATAA+GGG - chr7_2:43758676-43758695 Msa1058700:intron 10.0%
!! ATATGATAAAAATGTAATAT+TGG - chr7_2:43758737-43758756 Msa1058700:intron 10.0%
!! ATATCATAAAACATTAATAT+TGG - chr7_2:43759391-43759410 Msa1058700:intron 10.0%
!!! TTTTGTTTGAATTTTTCATT+TGG - chr7_2:43756122-43756141 Msa1058700:three_prime_UTR 15.0%
!!! TTTGTTTGAATTTTTCATTT+GGG - chr7_2:43756123-43756142 Msa1058700:three_prime_UTR 15.0%
!!! GTTTTTGTTAATTCATAATT+TGG - chr7_2:43756321-43756340 Msa1058700:intron 15.0%
!!! AAATTTATTGAATTTAGCTT+AGG - chr7_2:43756350-43756369 Msa1058700:intron 15.0%
!!! TTTTGTTAATTTTCTTTTCT+CGG - chr7_2:43756385-43756404 Msa1058700:intron 15.0%
!!! TTTTTATTTGCAATTTGAAA+TGG - chr7_2:43756462-43756481 Msa1058700:CDS 15.0%
!!! TTTTATTTGCAATTTGAAAT+GGG - chr7_2:43756463-43756482 Msa1058700:CDS 15.0%
!! GTATAAAGAAATATTGTATT+TGG - chr7_2:43756957-43756976 Msa1058700:CDS 15.0%
!! TTTACTTTATAACATATTTG+TGG - chr7_2:43757996-43758015 Msa1058700:intron 15.0%
!! ATTAATATTGAAAAATGAAG+GGG + chr7_2:43758201-43758220 None:intergenic 15.0%
!! ATATGATAAAACTGTAATAT+TGG - chr7_2:43758280-43758299 Msa1058700:intron 15.0%
!!! TTTTATCATATATAAGTATC+AGG + chr7_2:43758728-43758747 None:intergenic 15.0%
!! TATTAGTTCAATAATTCATA+TGG + chr7_2:43759936-43759955 None:intergenic 15.0%
!!! ATGAAAAACATTTCTTTTTT+GGG + chr7_2:43760870-43760889 None:intergenic 15.0%
!!! AATGAAAAACATTTCTTTTT+TGG + chr7_2:43760871-43760890 None:intergenic 15.0%
!!! TTAAATTCTCGATTAGTTTA+AGG - chr7_2:43756539-43756558 Msa1058700:CDS 20.0%
!!! CTTATGATGTTTTCTTTTAT+TGG - chr7_2:43757044-43757063 Msa1058700:intron 20.0%
!! AGTAGAATAAAATGTACAAA+AGG + chr7_2:43757870-43757889 None:intergenic 20.0%
!!! TTTTATCATATGTAAGTATC+AGG + chr7_2:43758271-43758290 None:intergenic 20.0%
!! AGTAAAATACCAAAATATGT+TGG + chr7_2:43758887-43758906 None:intergenic 20.0%
!! ATGTCATCGTATTTAAAAAA+GGG + chr7_2:43759327-43759346 None:intergenic 20.0%
!! TACAATTACACTCTTATTAT+AGG - chr7_2:43760179-43760198 Msa1058700:intron 20.0%
!! ACAATTACACTCTTATTATA+GGG - chr7_2:43760180-43760199 Msa1058700:intron 20.0%
!!! TTCACTAAATTATACCTTTT+TGG - chr7_2:43760928-43760947 Msa1058700:intron 20.0%
! ATGAAGAGTAATGAAGAAAT+GGG + chr7_2:43756013-43756032 None:intergenic 25.0%
! AATGAAGAGTAATGAAGAAA+TGG + chr7_2:43756014-43756033 None:intergenic 25.0%
! GTATCAAAACAATGAAGAAT+TGG + chr7_2:43756072-43756091 None:intergenic 25.0%
!! AATCAAATTTTTCCCCAATT+GGG + chr7_2:43756094-43756113 None:intergenic 25.0%
!! AAATCAAATTTTTCCCCAAT+TGG + chr7_2:43756095-43756114 None:intergenic 25.0%
!!! ATTTTTCATTTGGGTTTTTC+AGG - chr7_2:43756132-43756151 Msa1058700:three_prime_UTR 25.0%
! ATTTCAATATTTAGCTGTGA+AGG - chr7_2:43756844-43756863 Msa1058700:intron 25.0%
! TGAAATTACAAGAAAGTAAC+TGG + chr7_2:43756891-43756910 None:intergenic 25.0%
! TAATGATGCATTTCTTTCAA+TGG - chr7_2:43757285-43757304 Msa1058700:CDS 25.0%
!!! CAAATATGGCACTTTAAAAT+TGG - chr7_2:43757577-43757596 Msa1058700:intron 25.0%
! TTTAGAGATCAAAATTCACA+AGG + chr7_2:43757650-43757669 None:intergenic 25.0%
! AATGTAACTATGACAAAAAC+AGG + chr7_2:43758088-43758107 None:intergenic 25.0%
!! TTTTGTCATAGTTACATTGA+TGG - chr7_2:43758090-43758109 Msa1058700:intron 25.0%
! ATTGTACATCAGTATAACTA+AGG + chr7_2:43758637-43758656 None:intergenic 25.0%
! AGATTAAATATGATGACATG+AGG - chr7_2:43759119-43759138 Msa1058700:intron 25.0%
! GATTAAATATGATGACATGA+GGG - chr7_2:43759120-43759139 Msa1058700:intron 25.0%
! ATTAAATATGATGACATGAG+GGG - chr7_2:43759121-43759140 Msa1058700:intron 25.0%
! CATGTCATCGTATTTAAAAA+AGG + chr7_2:43759328-43759347 None:intergenic 25.0%
! GTTTAAATATTGTACCATGT+TGG + chr7_2:43759538-43759557 None:intergenic 25.0%
! TATGATTGTAAAATTGTGGA+GGG - chr7_2:43759718-43759737 Msa1058700:intron 25.0%
!!! AATATTTTTTCAGCATGATG+TGG - chr7_2:43759908-43759927 Msa1058700:CDS 25.0%
! AGTGGACATATAATCAAAAT+CGG + chr7_2:43760159-43760178 None:intergenic 25.0%
!! AATAAGAGTGTAATTGTAAG+TGG + chr7_2:43760177-43760196 None:intergenic 25.0%
! TGCATATGATGTAATACTAT+AGG - chr7_2:43760702-43760721 Msa1058700:intron 25.0%
!! ACCTTTTTGGATATGAATTT+TGG - chr7_2:43760941-43760960 Msa1058700:intron 25.0%
! ACCAAAATTCATATCCAAAA+AGG + chr7_2:43760945-43760964 None:intergenic 25.0%
! AAAACAGAAATTGTTATGCT+TGG - chr7_2:43761019-43761038 Msa1058700:five_prime_UTR 25.0%
AAATTAGGGTTTCAATGAAG+AGG + chr7_2:43755949-43755968 None:intergenic 30.0%
!! TAATGAAGAAATGGGTTTTG+CGG + chr7_2:43756005-43756024 None:intergenic 30.0%
!!! TCATTGTTTTGATACCCAAT+TGG - chr7_2:43756077-43756096 Msa1058700:three_prime_UTR 30.0%
!!! CATTGTTTTGATACCCAATT+GGG - chr7_2:43756078-43756097 Msa1058700:three_prime_UTR 30.0%
!!! ATTGTTTTGATACCCAATTG+GGG - chr7_2:43756079-43756098 Msa1058700:three_prime_UTR 30.0%
TTGTATTTGGTTACAACATC+AGG + chr7_2:43756232-43756251 None:intergenic 30.0%
!!! TTCTTTTCTCGGTTAGTTTA+AGG - chr7_2:43756396-43756415 Msa1058700:intron 30.0%
!! GGCTTTGAAGTTAGTTATTT+CGG - chr7_2:43756648-43756667 Msa1058700:intron 30.0%
! GTTTTCTTTTATTGGTGTGA+AGG - chr7_2:43757052-43757071 Msa1058700:intron 30.0%
TTGTTAACAGAAATACAGGT+CGG + chr7_2:43757135-43757154 None:intergenic 30.0%
! TGTGTTGTTAACAGAAATAC+AGG + chr7_2:43757139-43757158 None:intergenic 30.0%
!! ATTTGGCTTGTCATATAGAT+GGG - chr7_2:43757316-43757335 Msa1058700:intron 30.0%
! GTTTGAAGTCAGTTCAAATA+TGG - chr7_2:43757563-43757582 Msa1058700:intron 30.0%
ATGAAAACTAATCATGAGCT+AGG - chr7_2:43757672-43757691 Msa1058700:intron 30.0%
ATCATATGTGGTTAAATGGT+TGG + chr7_2:43757772-43757791 None:intergenic 30.0%
AGACATCATATGTGGTTAAA+TGG + chr7_2:43757776-43757795 None:intergenic 30.0%
TTGATAGGAACTGAAAAACT+GGG + chr7_2:43757958-43757977 None:intergenic 30.0%
TTTGATAGGAACTGAAAAAC+TGG + chr7_2:43757959-43757978 None:intergenic 30.0%
!! CAAAACAAGACAGTTTTGAT+AGG + chr7_2:43757973-43757992 None:intergenic 30.0%
!!! CTATCAAAACTGTCTTGTTT+TGG - chr7_2:43757971-43757990 Msa1058700:intron 30.0%
CTATATGATGAATACGTCAT+AGG - chr7_2:43758041-43758060 Msa1058700:intron 30.0%
AAATTGCTTGAAGTATGACA+AGG + chr7_2:43758175-43758194 None:intergenic 30.0%
! GAAGCTTTATCTTGTCTATT+TGG - chr7_2:43758235-43758254 Msa1058700:intron 30.0%
ATATGTAAGTATCAGGATTC+AGG + chr7_2:43758264-43758283 None:intergenic 30.0%
!! CAATATGATTTTGATCACCT+CGG + chr7_2:43758314-43758333 None:intergenic 30.0%
CTATATGATGACTACATCAT+AGG - chr7_2:43758502-43758521 Msa1058700:intron 30.0%
AGTGTAACTATGACATAAAC+AGG + chr7_2:43758550-43758569 None:intergenic 30.0%
TTATGTCATAGTTACACTGA+TGG - chr7_2:43758552-43758571 Msa1058700:intron 30.0%
AGTGGGTATTTATGAAACAA+AGG + chr7_2:43758590-43758609 None:intergenic 30.0%
GAAATAAGAAACACAACCAA+AGG + chr7_2:43758615-43758634 None:intergenic 30.0%
CTATATGATGAATACATCGT+AGG - chr7_2:43758944-43758963 Msa1058700:intron 30.0%
AGTGTAACTATGACATAAAC+AGG + chr7_2:43758550-43758569 None:intergenic 30.0%
AGTGGGTAATTATGAAACAA+AGG + chr7_2:43759032-43759051 None:intergenic 30.0%
CAATAGAAAACACAACCAAT+GGG + chr7_2:43759056-43759075 None:intergenic 30.0%
TCAATAGAAAACACAACCAA+TGG + chr7_2:43759057-43759076 None:intergenic 30.0%
TTGTGTAAAATAACAGGGTA+AGG - chr7_2:43759218-43759237 Msa1058700:intron 30.0%
TACAATACACCAATAATGGT+GGG - chr7_2:43759246-43759265 Msa1058700:intron 30.0%
CGTATTTAAAAAAGGGCAAA+GGG + chr7_2:43759320-43759339 None:intergenic 30.0%
TCGTATTTAAAAAAGGGCAA+AGG + chr7_2:43759321-43759340 None:intergenic 30.0%
!! ATTTTCTAGTATAGCCAACA+TGG - chr7_2:43758410-43758429 Msa1058700:intron 30.0%
AAATTTCCTGAGTTGTAGTA+GGG - chr7_2:43759620-43759639 Msa1058700:CDS 30.0%
! ATACTTTTCTTGACAGAACA+AGG - chr7_2:43759660-43759679 Msa1058700:CDS 30.0%
TGTATCTGATGCAATTCAAA+AGG - chr7_2:43759684-43759703 Msa1058700:intron 30.0%
TGCCTATGATTGTAAAATTG+TGG - chr7_2:43759714-43759733 Msa1058700:intron 30.0%
! CTCCACAATTTTACAATCAT+AGG + chr7_2:43759719-43759738 None:intergenic 30.0%
CTATGATTGTAAAATTGTGG+AGG - chr7_2:43759717-43759736 Msa1058700:intron 30.0%
TGTACTTAGTATCTCTAATC+CGG - chr7_2:43759789-43759808 Msa1058700:CDS 30.0%
ATTGATATAGTGACAAGTAC+TGG - chr7_2:43759859-43759878 Msa1058700:CDS 30.0%
AGCAGACAACTATTTATAAG+AGG - chr7_2:43759992-43760011 Msa1058700:intron 30.0%
GCAGACAACTATTTATAAGA+GGG - chr7_2:43759993-43760012 Msa1058700:intron 30.0%
! ATGGCATGATTGGAAATTTT+TGG + chr7_2:43760080-43760099 None:intergenic 30.0%
! AAGCCTGGTAATTTTTCTAT+AGG - chr7_2:43760286-43760305 Msa1058700:CDS 30.0%
TTGCCTATAGAAAAATTACC+AGG + chr7_2:43760292-43760311 None:intergenic 30.0%
AACAGTATAGCAAGAAGTTT+AGG + chr7_2:43760355-43760374 None:intergenic 30.0%
TAAATACAAAAGCGACATGA+TGG + chr7_2:43760637-43760656 None:intergenic 30.0%
! TTTTTGTTCAGGTAAGAAAG+AGG - chr7_2:43760755-43760774 Msa1058700:CDS 30.0%
!!! CATTTCTTTTTTGGGATTGA+GGG + chr7_2:43760862-43760881 None:intergenic 30.0%
!!! ACATTTCTTTTTTGGGATTG+AGG + chr7_2:43760863-43760882 None:intergenic 30.0%
ACAATGTACCAAAACTGAAA+GGG + chr7_2:43760909-43760928 None:intergenic 30.0%
AACAATGTACCAAAACTGAA+AGG + chr7_2:43760910-43760929 None:intergenic 30.0%
!!! AGGCAAGTTTTGGCTTATAT+AGG + chr7_2:43755929-43755948 None:intergenic 35.0%
! TTCAATGAAGAGGCAAGTTT+TGG + chr7_2:43755939-43755958 None:intergenic 35.0%
GGGTTTGTGAAGTGAAATTA+GGG + chr7_2:43755963-43755982 None:intergenic 35.0%
AGGGTTTGTGAAGTGAAATT+AGG + chr7_2:43755964-43755983 None:intergenic 35.0%
GCAAAGATTCGAAGAAATGA+GGG + chr7_2:43755983-43756002 None:intergenic 35.0%
!! TGGATTTGTTTGTTATGCAG+AGG - chr7_2:43756627-43756646 Msa1058700:intron 35.0%
TATTTCGGAATGTAAACCGA+AGG - chr7_2:43756663-43756682 Msa1058700:intron 35.0%
TGTTAACAGAAATACAGGTC+GGG + chr7_2:43757134-43757153 None:intergenic 35.0%
TTTCAATGGTTGCAGTGATT+TGG - chr7_2:43757299-43757318 Msa1058700:CDS 35.0%
!! GATTTGGCTTGTCATATAGA+TGG - chr7_2:43757315-43757334 Msa1058700:intron 35.0%
CAATTGATTACCTTCTTTCC+TGG + chr7_2:43757459-43757478 None:intergenic 35.0%
ATATTGCTCCACATGTAGAT+AGG - chr7_2:43757541-43757560 Msa1058700:intron 35.0%
ACTTCAAACCTATCTACATG+TGG + chr7_2:43757552-43757571 None:intergenic 35.0%
! ACTTTGTTTGTTGCATCTGA+AGG - chr7_2:43757614-43757633 Msa1058700:intron 35.0%
! CTTTGTTTGTTGCATCTGAA+GGG - chr7_2:43757615-43757634 Msa1058700:intron 35.0%
GATCAAAATTCACAAGGCAA+AGG + chr7_2:43757644-43757663 None:intergenic 35.0%
AGCTAGGATAAAATCCAATG+AGG - chr7_2:43757688-43757707 Msa1058700:intron 35.0%
CTATGACAATAAAGCCTCAT+TGG + chr7_2:43757705-43757724 None:intergenic 35.0%
TGTCATAGTTACACTGATAG+AGG - chr7_2:43757717-43757736 Msa1058700:intron 35.0%
ACAAGCAAAGACATCATATG+TGG + chr7_2:43757784-43757803 None:intergenic 35.0%
TGATAGGAACTGAAAAACTG+GGG + chr7_2:43757957-43757976 None:intergenic 35.0%
ATGACAAAAACAGGCTTCAT+TGG + chr7_2:43758079-43758098 None:intergenic 35.0%
ATGACATAAACAGGCTTCAT+TGG + chr7_2:43758541-43758560 None:intergenic 35.0%
CATAAATACCCACTTTCCTT+TGG - chr7_2:43758596-43758615 Msa1058700:intron 35.0%
AAACACAACCAAAGGAAAGT+GGG + chr7_2:43758607-43758626 None:intergenic 35.0%
!!! CAATATGGTTTTGATCACCT+CGG + chr7_2:43758771-43758790 None:intergenic 35.0%
GGAAAAAGAGGAAACCAATA+TGG + chr7_2:43758786-43758805 None:intergenic 35.0%
ATGACATAAACAGGCTTCAT+TGG + chr7_2:43758541-43758560 None:intergenic 35.0%
AGCCTCTTGTGTAAAATAAC+AGG - chr7_2:43759212-43759231 Msa1058700:intron 35.0%
GCCTCTTGTGTAAAATAACA+GGG - chr7_2:43759213-43759232 Msa1058700:intron 35.0%
!!! ACCCTGTTATTTTACACAAG+AGG + chr7_2:43759217-43759236 None:intergenic 35.0%
TGCGTACAATACACCAATAA+TGG - chr7_2:43759242-43759261 Msa1058700:intron 35.0%
GTACAATACACCAATAATGG+TGG - chr7_2:43759245-43759264 Msa1058700:intron 35.0%
CAATATGGTTATGATCACCT+CGG + chr7_2:43759425-43759444 None:intergenic 35.0%
GGAAAAAGAGGAAACCAATA+TGG + chr7_2:43758786-43758805 None:intergenic 35.0%
CAAATTTCCTGAGTTGTAGT+AGG - chr7_2:43759619-43759638 Msa1058700:CDS 35.0%
CAATCACAAACTGCTTCAAT+TGG + chr7_2:43759756-43759775 None:intergenic 35.0%
TTGAAGCAGTTTGTGATTGA+CGG - chr7_2:43759757-43759776 Msa1058700:intron 35.0%
TATCTCTAATCCGGATACAA+GGG - chr7_2:43759798-43759817 Msa1058700:CDS 35.0%
TGCTTCTCATCCAATAACTT+AGG + chr7_2:43759976-43759995 None:intergenic 35.0%
!! ACTTGAAGATGAAAGCATCT+CGG - chr7_2:43760034-43760053 Msa1058700:intron 35.0%
TAGAGTTACCTAGCAGAAAA+TGG + chr7_2:43760099-43760118 None:intergenic 35.0%
ACACTCTTATTATAGGGCTT+TGG - chr7_2:43760186-43760205 Msa1058700:intron 35.0%
TCATACATTCCACTAAACCA+AGG + chr7_2:43760228-43760247 None:intergenic 35.0%
! TTTTCATGCAGAACAGGATA+TGG + chr7_2:43760268-43760287 None:intergenic 35.0%
AACATGAACAGTTCCACAAT+TGG - chr7_2:43760313-43760332 Msa1058700:CDS 35.0%
ACATGAACAGTTCCACAATT+GGG - chr7_2:43760314-43760333 Msa1058700:CDS 35.0%
TGCTATACTGTTTCCTTATC+AGG - chr7_2:43760363-43760382 Msa1058700:intron 35.0%
TGCAACAAAATCACCTGATA+AGG + chr7_2:43760379-43760398 None:intergenic 35.0%
TGTTGCACACATCAAATTCA+CGG - chr7_2:43760392-43760411 Msa1058700:intron 35.0%
CTTGTTAATGCCAAATGGAT+CGG - chr7_2:43760416-43760435 Msa1058700:intron 35.0%
!! GGATCATCTATCGTTTTTGT+GGG + chr7_2:43760477-43760496 None:intergenic 35.0%
ACAAAGACAAAGAAGAAAGG+TGG - chr7_2:43760525-43760544 Msa1058700:intron 35.0%
AAGAAGAAAAAAGGTAGGCT+TGG - chr7_2:43760552-43760571 Msa1058700:intron 35.0%
! CGACATGATGGAACAAAAAT+AGG + chr7_2:43760625-43760644 None:intergenic 35.0%
!! CATATGCTTTCTGAAATGCA+TGG - chr7_2:43760675-43760694 Msa1058700:intron 35.0%
!! GATGCTTTGTGTTTTTGTTC+AGG - chr7_2:43760744-43760763 Msa1058700:CDS 35.0%
CAATGTACCAAAACTGAAAG+GGG + chr7_2:43760908-43760927 None:intergenic 35.0%
GGCAAAGATTCGAAGAAATG+AGG + chr7_2:43755984-43756003 None:intergenic 40.0%
CATCAAGGATTGAACAAGTG+AGG - chr7_2:43756157-43756176 Msa1058700:exon 40.0%
!! CTCAGCTGCAGTTTTGTATT+TGG + chr7_2:43756245-43756264 None:intergenic 40.0%
GTTGTCGAAATTTGCGAGAA+AGG - chr7_2:43756691-43756710 Msa1058700:intron 40.0%
GTGAAGAAGAAGATAGAGAG+AGG - chr7_2:43757099-43757118 Msa1058700:intron 40.0%
!!! CTAGTTTTGTGATTACCCTG+TGG - chr7_2:43757238-43757257 Msa1058700:CDS 40.0%
TTGTGATTACCCTGTGGTTT+CGG - chr7_2:43757244-43757263 Msa1058700:CDS 40.0%
AAATGATAGCCGAAACCACA+GGG + chr7_2:43757256-43757275 None:intergenic 40.0%
CATACTCATGTTCTTCAGGA+AGG - chr7_2:43757357-43757376 Msa1058700:intron 40.0%
ACACTGATAGAGGTCATTTG+TGG - chr7_2:43757727-43757746 Msa1058700:intron 40.0%
AACTACACATTTCAGCTGAG+AGG + chr7_2:43757807-43757826 None:intergenic 40.0%
TGATGAATACGTCATAGGCT+AGG - chr7_2:43758046-43758065 Msa1058700:intron 40.0%
AATAAATACCCATATCCCCG+TGG - chr7_2:43758134-43758153 Msa1058700:intron 40.0%
TAATATTGGCATCTTTGCCG+AGG - chr7_2:43758294-43758313 Msa1058700:intron 40.0%
GATGACTACATCATAGGCTA+TGG - chr7_2:43758508-43758527 Msa1058700:intron 40.0%
GAAACACAACCAAAGGAAAG+TGG + chr7_2:43758608-43758627 None:intergenic 40.0%
TAATATTGGCAACTTTGCCG+AGG - chr7_2:43758751-43758770 Msa1058700:intron 40.0%
CGAGGTGATCAAAACCATAT+TGG - chr7_2:43758769-43758788 Msa1058700:intron 40.0%
! TTTTGGCAACAGGGAAAAAG+AGG + chr7_2:43758798-43758817 None:intergenic 40.0%
!! CCATTCAAGTTTTGGCAACA+GGG + chr7_2:43758807-43758826 None:intergenic 40.0%
!! AGTTCCAGCCATTCAAGTTT+TGG + chr7_2:43758815-43758834 None:intergenic 40.0%
! CTAGTGCAGCCAACATATTT+TGG - chr7_2:43758875-43758894 Msa1058700:intron 40.0%
GATGAATACATCGTAGGCTA+TGG - chr7_2:43758950-43758969 Msa1058700:intron 40.0%
CATAATTACCCACTTCCCAT+TGG - chr7_2:43759038-43759057 Msa1058700:intron 40.0%
AAACACAACCAATGGGAAGT+GGG + chr7_2:43759049-43759068 None:intergenic 40.0%
AAAACACAACCAATGGGAAG+TGG + chr7_2:43759050-43759069 None:intergenic 40.0%
AAAAACCTTGAAGCACGACA+AGG + chr7_2:43759080-43759099 None:intergenic 40.0%
GTTCTTGTCATGTGACTGAA+AGG - chr7_2:43759166-43759185 Msa1058700:intron 40.0%
GTCATGTGACTGAAAGGTTA+CGG - chr7_2:43759172-43759191 Msa1058700:intron 40.0%
TCATGTGACTGAAAGGTTAC+GGG - chr7_2:43759173-43759192 Msa1058700:intron 40.0%
TAATATTGGCAACTTTGCCG+AGG - chr7_2:43758751-43758770 Msa1058700:intron 40.0%
CGAGGTGATCATAACCATAT+TGG - chr7_2:43759423-43759442 Msa1058700:intron 40.0%
! AGTTCCAGCCATTCAAGTTT+CGG + chr7_2:43758815-43758834 None:intergenic 40.0%
AATACACCCTACTACAACTC+AGG + chr7_2:43759629-43759648 None:intergenic 40.0%
TCACAAACTGCTTCAATTGG+TGG + chr7_2:43759753-43759772 None:intergenic 40.0%
GTTTGTGATTGACGGTAACA+AGG - chr7_2:43759765-43759784 Msa1058700:intron 40.0%
GTATCTCTAATCCGGATACA+AGG - chr7_2:43759797-43759816 Msa1058700:CDS 40.0%
!! ATAGTGACAAGTACTGGAGA+AGG - chr7_2:43759865-43759884 Msa1058700:CDS 40.0%
TCCAATAACTTAGGCTGCAA+GGG + chr7_2:43759967-43759986 None:intergenic 40.0%
ATCCAATAACTTAGGCTGCA+AGG + chr7_2:43759968-43759987 None:intergenic 40.0%
CTAGCAGAAAATGGCATGAT+TGG + chr7_2:43760090-43760109 None:intergenic 40.0%
!!! CAATCATGCCATTTTCTGCT+AGG - chr7_2:43760088-43760107 Msa1058700:intron 40.0%
! CTCTTATTATAGGGCTTTGG+AGG - chr7_2:43760189-43760208 Msa1058700:intron 40.0%
ATAGGAACACAACCCAATTG+TGG + chr7_2:43760329-43760348 None:intergenic 40.0%
AGCAAGAAGTTTAGGCTCAT+AGG + chr7_2:43760347-43760366 None:intergenic 40.0%
!! ACGGTCTTGTTAATGCCAAA+TGG - chr7_2:43760411-43760430 Msa1058700:intron 40.0%
!! TTTTTGTGGGCTGCAATTCT+TGG + chr7_2:43760464-43760483 None:intergenic 40.0%
!! GGGATCATCTATCGTTTTTG+TGG + chr7_2:43760478-43760497 None:intergenic 40.0%
GGCACAAAGACAAAGAAGAA+AGG - chr7_2:43760522-43760541 Msa1058700:intron 40.0%
AAGACAAAGAAGAAAGGTGG+CGG - chr7_2:43760528-43760547 Msa1058700:intron 40.0%
GCGGAAAGAAGAAAAAAGGT+AGG - chr7_2:43760547-43760566 Msa1058700:intron 40.0%
TTCAGGTAAGAAAGAGGACA+AGG - chr7_2:43760761-43760780 Msa1058700:CDS 40.0%
GTCAATTCATTCCTGAGATG+TGG + chr7_2:43760832-43760851 None:intergenic 40.0%
!!! TTTTTTGGGATTGAGGGTGA+GGG + chr7_2:43760856-43760875 None:intergenic 40.0%
!!! TGGGTTTTTCAGGAGCATCA+AGG - chr7_2:43756142-43756161 Msa1058700:three_prime_UTR 45.0%
CACCATGTCGGATGATGAAA+GGG - chr7_2:43756180-43756199 Msa1058700:CDS 45.0%
! ATTTCGACAACCTTGGCCTT+CGG + chr7_2:43756682-43756701 None:intergenic 45.0%
CTCGCAAATTTCGACAACCT+TGG + chr7_2:43756689-43756708 None:intergenic 45.0%
AACTAGTATCCTCTCACGTG+CGG - chr7_2:43756752-43756771 Msa1058700:CDS 45.0%
TTCCAACACTGTCTCATCAC+TGG + chr7_2:43757184-43757203 None:intergenic 45.0%
! GATGAGACAGTGTTGGAAGA+AGG - chr7_2:43757186-43757205 Msa1058700:CDS 45.0%
CAAATGATAGCCGAAACCAC+AGG + chr7_2:43757257-43757276 None:intergenic 45.0%
GGCTCATACTCATGTTCTTC+AGG - chr7_2:43757353-43757372 Msa1058700:intron 45.0%
AGGTTGCCTTAAGGCTTGTA+AGG - chr7_2:43757433-43757452 Msa1058700:intron 45.0%
ATGTGGTTAAATGGTTGGCG+CGG + chr7_2:43757767-43757786 None:intergenic 45.0%
TCAATAAAGACGCAACCACG+GGG + chr7_2:43758152-43758171 None:intergenic 45.0%
GTCAATAAAGACGCAACCAC+GGG + chr7_2:43758153-43758172 None:intergenic 45.0%
GGTCAATAAAGACGCAACCA+CGG + chr7_2:43758154-43758173 None:intergenic 45.0%
TTTCGGCAACAGGGAAAAAG+AGG + chr7_2:43758341-43758360 None:intergenic 45.0%
! CCATTCAAGTTTCGGCAACA+GGG + chr7_2:43758350-43758369 None:intergenic 45.0%
TTGCCGAAACTTGAATGGCT+GGG - chr7_2:43758352-43758371 Msa1058700:intron 45.0%
! AGTCCCAGCCATTCAAGTTT+CGG + chr7_2:43758358-43758377 None:intergenic 45.0%
CCCTGTTGCCAAAACTTGAA+TGG - chr7_2:43758804-43758823 Msa1058700:intron 45.0%
!! GCCATTCAAGTTTTGGCAAC+AGG + chr7_2:43758808-43758827 None:intergenic 45.0%
GTTGCCAAAACTTGAATGGC+TGG - chr7_2:43758808-43758827 Msa1058700:intron 45.0%
ATTGACCTTGTCGTGCTTCA+AGG - chr7_2:43759072-43759091 Msa1058700:intron 45.0%
GAACTTTACCAGTTGCGCTA+AGG + chr7_2:43759150-43759169 None:intergenic 45.0%
! TTACACAAGAGGCTGTTTCC+AGG + chr7_2:43759206-43759225 None:intergenic 45.0%
TTTCGGCAACAGGGAAAAAG+AGG + chr7_2:43758341-43758360 None:intergenic 45.0%
! CCATTCAAGTTTCGGCAACA+GGG + chr7_2:43758350-43758369 None:intergenic 45.0%
GAAACTTGAATGGCTGGAAC+TGG - chr7_2:43759468-43759487 Msa1058700:intron 45.0%
GCATCATCAACCCTTGTATC+CGG + chr7_2:43759811-43759830 None:intergenic 45.0%
!! GGTTGATGATGCAGAGTTTG+AGG - chr7_2:43759819-43759838 Msa1058700:CDS 45.0%
TCCCTTGCAGCCTAAGTTAT+TGG - chr7_2:43759963-43759982 Msa1058700:intron 45.0%
GATAGATGATCCCGAGATCA+AGG - chr7_2:43760485-43760504 Msa1058700:intron 45.0%
CTTCTTTGTCTTTGTGCCCA+AGG + chr7_2:43760520-43760539 None:intergenic 45.0%
!! GGTGGCGGAAAGAAGAAAAA+AGG - chr7_2:43760543-43760562 Msa1058700:intron 45.0%
AACAAATGAGGCCACATCTC+AGG - chr7_2:43760818-43760837 Msa1058700:exon 45.0%
!!! CTTTTTTGGGATTGAGGGTG+AGG + chr7_2:43760857-43760876 None:intergenic 45.0%
! TCTGACACCCCTTTCAGTTT+TGG - chr7_2:43760898-43760917 Msa1058700:intron 45.0%
!!! TTTTGTTAATATTATTTAAA+TGG - chr7_2:43757014-43757033 Msa1058700:CDS 5.0%
!! TAAAAAAAAAAAAAAAATGT+TGG + chr7_2:43758427-43758446 None:intergenic 5.0%
! GAACAAGTGAGGCACCATGT+CGG - chr7_2:43756168-43756187 Msa1058700:CDS 50.0%
GCACCATGTCGGATGATGAA+AGG - chr7_2:43756179-43756198 Msa1058700:CDS 50.0%
CTCCCTTTCATCATCCGACA+TGG + chr7_2:43756185-43756204 None:intergenic 50.0%
CATGTCGGATGATGAAAGGG+AGG - chr7_2:43756183-43756202 Msa1058700:CDS 50.0%
GGATGATGAAAGGGAGGAGA+AGG - chr7_2:43756189-43756208 Msa1058700:CDS 50.0%
TGAAAGGGAGGAGAAGGAGT+TGG - chr7_2:43756195-43756214 Msa1058700:CDS 50.0%
GGAATGTAAACCGAAGGCCA+AGG - chr7_2:43756669-43756688 Msa1058700:intron 50.0%
TAATGTATGCCGCACGTGAG+AGG + chr7_2:43756764-43756783 None:intergenic 50.0%
! CACTGGCTAGAGGAGAGAAA+TGG + chr7_2:43757167-43757186 None:intergenic 50.0%
! ACTGTCTCATCACTGGCTAG+AGG + chr7_2:43757177-43757196 None:intergenic 50.0%
AGCCAGTGATGAGACAGTGT+TGG - chr7_2:43757179-43757198 Msa1058700:CDS 50.0%
! AGATGGGTTCATTGCTGCTG+TGG - chr7_2:43757332-43757351 Msa1058700:intron 50.0%
CTTCAGGAAGGTCCGATTAC+TGG - chr7_2:43757369-43757388 Msa1058700:intron 50.0%
AGGAAGGTCCGATTACTGGA+CGG - chr7_2:43757373-43757392 Msa1058700:intron 50.0%
!! TCCTGGCCTTACAAGCCTTA+AGG + chr7_2:43757442-43757461 None:intergenic 50.0%
GCTTGTAAGGCCAGGAAAGA+AGG - chr7_2:43757446-43757465 Msa1058700:intron 50.0%
CCCTGTTGCCGAAACTTGAA+TGG - chr7_2:43758347-43758366 Msa1058700:intron 50.0%
! GCCATTCAAGTTTCGGCAAC+AGG + chr7_2:43758351-43758370 None:intergenic 50.0%
GTTGCCGAAACTTGAATGGC+TGG - chr7_2:43758351-43758370 Msa1058700:intron 50.0%
AAGGTTACGGGTTCAAGTCC+TGG - chr7_2:43759185-43759204 Msa1058700:intron 50.0%
AAAAAGGGCAAAGGGCAACC+CGG + chr7_2:43759312-43759331 None:intergenic 50.0%
CCCTGTTGCCGAAACTTGAA+TGG - chr7_2:43758347-43758366 Msa1058700:intron 50.0%
! GCCATTCAAGTTTCGGCAAC+AGG + chr7_2:43758351-43758370 None:intergenic 50.0%
GTTGCCGAAACTTGAATGGC+TGG - chr7_2:43758351-43758370 Msa1058700:intron 50.0%
!! GACAAGTACTGGAGAAGGCA+AGG - chr7_2:43759870-43759889 Msa1058700:CDS 50.0%
! AGTACTGGAGAAGGCAAGGT+AGG - chr7_2:43759874-43759893 Msa1058700:CDS 50.0%
AAGAGCTCGCCTTGGTTTAG+TGG - chr7_2:43760216-43760235 Msa1058700:intron 50.0%
! CCAGGCTTTTCATGCAGAAC+AGG + chr7_2:43760274-43760293 None:intergenic 50.0%
CCTGTTCTGCATGAAAAGCC+TGG - chr7_2:43760271-43760290 Msa1058700:intron 50.0%
ATGATCCCGAGATCAAGGCA+TGG - chr7_2:43760490-43760509 Msa1058700:intron 50.0%
!! ATCAAGGCATGGCTAGCCTT+GGG - chr7_2:43760501-43760520 Msa1058700:intron 50.0%
! GCCAGTGGACTCAACAAATG+AGG - chr7_2:43760806-43760825 Msa1058700:exon 50.0%
! GCCTCATTTGTTGAGTCCAC+TGG + chr7_2:43760810-43760829 None:intergenic 50.0%
GGAAGGTCCGATTACTGGAC+GGG - chr7_2:43757374-43757393 Msa1058700:intron 55.0%
TCTGCTGCCCGTCCAGTAAT+CGG + chr7_2:43757384-43757403 None:intergenic 55.0%
ACGGGCAGCAGATGTCATTG+CGG - chr7_2:43757392-43757411 Msa1058700:intron 55.0%
CTGCTGCTGAGGTTGCCTTA+AGG - chr7_2:43757424-43757443 Msa1058700:intron 55.0%
GCCTTAAGGCTTGTAAGGCC+AGG - chr7_2:43757438-43757457 Msa1058700:intron 55.0%
AGACGCAACCACGGGGATAT+GGG + chr7_2:43758145-43758164 None:intergenic 55.0%
AAGACGCAACCACGGGGATA+TGG + chr7_2:43758146-43758165 None:intergenic 55.0%
AGGGGTAACCTTAGCGCAAC+TGG - chr7_2:43759139-43759158 Msa1058700:intron 55.0%
GGAAGGGGTCCCACCATTAT+TGG + chr7_2:43759258-43759277 None:intergenic 55.0%
! ATAATGGTGGGACCCCTTCC+TGG - chr7_2:43759258-43759277 Msa1058700:intron 55.0%
CTAAAGCTCCCGCATACGCA+GGG + chr7_2:43759285-43759304 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG + chr7_2:43759286-43759305 None:intergenic 55.0%
! ATGCGGGAGCTTTAGTGCAC+CGG - chr7_2:43759290-43759309 Msa1058700:intron 55.0%
GAGGAGAAAAGAGCTCGCCT+TGG - chr7_2:43760208-43760227 Msa1058700:intron 55.0%
GGAGTGGATGAGATGTGACG+CGG + chr7_2:43760443-43760462 None:intergenic 55.0%
! GTGGGCTGCAATTCTTGGAG+TGG + chr7_2:43760459-43760478 None:intergenic 55.0%
GCTAGCCATGCCTTGATCTC+GGG + chr7_2:43760498-43760517 None:intergenic 55.0%
! GGCTAGCCATGCCTTGATCT+CGG + chr7_2:43760499-43760518 None:intergenic 55.0%
!! GATCAAGGCATGGCTAGCCT+TGG - chr7_2:43760500-43760519 Msa1058700:intron 55.0%
GGCTGCAAACACTGCTGCTG+AGG - chr7_2:43757413-43757432 Msa1058700:intron 60.0%
CATACGCAGGGTCCAGGAAG+GGG + chr7_2:43759273-43759292 None:intergenic 60.0%
GCATACGCAGGGTCCAGGAA+GGG + chr7_2:43759274-43759293 None:intergenic 60.0%
CTTCCTGGACCCTGCGTATG+CGG - chr7_2:43759273-43759292 Msa1058700:intron 60.0%
TTCCTGGACCCTGCGTATGC+GGG - chr7_2:43759274-43759293 Msa1058700:intron 60.0%
! TGCGGGAGCTTTAGTGCACC+GGG - chr7_2:43759291-43759310 Msa1058700:intron 60.0%
GTGACGCGGTCCGATCCATT+TGG + chr7_2:43760429-43760448 None:intergenic 60.0%
GACAGCAGAAGCTGAGCCAG+TGG - chr7_2:43760791-43760810 Msa1058700:CDS 60.0%
CGCATACGCAGGGTCCAGGA+AGG + chr7_2:43759275-43759294 None:intergenic 65.0%
CTCCCGCATACGCAGGGTCC+AGG + chr7_2:43759279-43759298 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 43755912 43761095 43755912 ID=Msa1058700;Name=Msa1058700
chr7_2 mRNA 43755912 43761095 43755912 ID=Msa1058700-mRNA-1;Parent=Msa1058700;Name=Msa1058700-mRNA-1;_AED=0.06;_eAED=0.06;_QI=175|1|1|1|0.88|0.8|10|250|394
chr7_2 exon 43755912 43756241 43755912 ID=Msa1058700-mRNA-1:exon:7923;Parent=Msa1058700-mRNA-1
chr7_2 exon 43756443 43756622 43756443 ID=Msa1058700-mRNA-1:exon:7922;Parent=Msa1058700-mRNA-1
chr7_2 exon 43756715 43756806 43756715 ID=Msa1058700-mRNA-1:exon:7921;Parent=Msa1058700-mRNA-1
chr7_2 exon 43756898 43757034 43756898 ID=Msa1058700-mRNA-1:exon:7920;Parent=Msa1058700-mRNA-1
chr7_2 exon 43757116 43757331 43757116 ID=Msa1058700-mRNA-1:exon:7919;Parent=Msa1058700-mRNA-1
chr7_2 exon 43759540 43759693 43759540 ID=Msa1058700-mRNA-1:exon:7918;Parent=Msa1058700-mRNA-1
chr7_2 exon 43759784 43759933 43759784 ID=Msa1058700-mRNA-1:exon:7917;Parent=Msa1058700-mRNA-1
chr7_2 exon 43760276 43760360 43760276 ID=Msa1058700-mRNA-1:exon:7916;Parent=Msa1058700-mRNA-1
chr7_2 exon 43760733 43760853 43760733 ID=Msa1058700-mRNA-1:exon:7915;Parent=Msa1058700-mRNA-1
chr7_2 exon 43760951 43761095 43760951 ID=Msa1058700-mRNA-1:exon:7914;Parent=Msa1058700-mRNA-1
chr7_2 five_prime_UTR 43760951 43761095 43760951 ID=Msa1058700-mRNA-1:five_prime_utr;Parent=Msa1058700-mRNA-1
chr7_2 five_prime_UTR 43760824 43760853 43760824 ID=Msa1058700-mRNA-1:five_prime_utr;Parent=Msa1058700-mRNA-1
chr7_2 CDS 43760733 43760823 43760733 ID=Msa1058700-mRNA-1:cds;Parent=Msa1058700-mRNA-1
chr7_2 CDS 43760276 43760360 43760276 ID=Msa1058700-mRNA-1:cds;Parent=Msa1058700-mRNA-1
chr7_2 CDS 43759784 43759933 43759784 ID=Msa1058700-mRNA-1:cds;Parent=Msa1058700-mRNA-1
chr7_2 CDS 43759540 43759693 43759540 ID=Msa1058700-mRNA-1:cds;Parent=Msa1058700-mRNA-1
chr7_2 CDS 43757116 43757331 43757116 ID=Msa1058700-mRNA-1:cds;Parent=Msa1058700-mRNA-1
chr7_2 CDS 43756898 43757034 43756898 ID=Msa1058700-mRNA-1:cds;Parent=Msa1058700-mRNA-1
chr7_2 CDS 43756715 43756806 43756715 ID=Msa1058700-mRNA-1:cds;Parent=Msa1058700-mRNA-1
chr7_2 CDS 43756443 43756622 43756443 ID=Msa1058700-mRNA-1:cds;Parent=Msa1058700-mRNA-1
chr7_2 CDS 43756162 43756241 43756162 ID=Msa1058700-mRNA-1:cds;Parent=Msa1058700-mRNA-1
chr7_2 three_prime_UTR 43755912 43756161 43755912 ID=Msa1058700-mRNA-1:three_prime_utr;Parent=Msa1058700-mRNA-1
Gene Sequence

>Msa1058700

ATGTCGGATGATGAAAGGGAGGAGAAGGAGTTGGATCTCACTTCACCTGATGTTGTAACCAAATACAAAACTGCAGCTGAGATCGTTAACAAGGCTTTGAAGTTAGTTATTTCGGAATGTAAACCGAAGGCCAAGGTTGTCGAAATTTGCGAGAAAGGAGATTCATTTATTAGAGAGCAAACTAGTAACGTGTACAAGAATGTGAAGAAGAAGATAGAGAGAGGTGTTGCTTTCCCGACCTGTATTTCTGTTAACAACACAATCTGCCATTTCTCTCCTCTAGCCAGTGATGAGACAGTGTTGGAAGAAGGCGATATAGTCAAAATTGATTTGGCTTGTCATATAGATGGGTTCATTGCTGCTGTGGCTCATACTCATGTTCTTCAGGAAGGTCCGATTACTGGACGGGCAGCAGATGTCATTGCGGCTGCAAACACTGCTGCTGAGGTTGCCTTAAGGCTTGTAAGGCCAGGAAAGAAGAACAAGGATGTATCTGATGCAATTCAAAAGGTTGCTGCTGCCTATGATTGTAAAATTGTGGAGGGTGTTCTAAGCCACCAATTGAAGCAGTTTGTGATTGACGGTAACAAGGTTGTACTTAGTATCTCTAATCCGGATACAAGGGTTGATGATGCAGAGTTTGAGGAAAATGAAGTTTATGCAATTGATATAGTGACAAGTACTGGAGAAGGCAAGCCTAAGTTATTGGATGAGAAGCAGACAACTATTTATAAGAGGGCTGTTGACAAGAGTTATCACTTGAAGATGAAAGCATCTCGGTTCATTTTCAGTGAAATAAGCCAAAAATTTCCAATCATGCCATTTTCTGCTAGGGCTTTGGAGGAGAAAAGAGCTCGCCTTGGTTTAGTGGAATGTATGAATCATGAGCTATTGCAGCCATATCCTGTTCTGCATGAAAAGCCTGGTGATTTTGTTGCACACATCAAATTCACGGTCTTGTTAATGCCAAATGGATCGGACCGCGTCACATCTCATCCACTCCAAGAATTGCAGCCCACAAAAACGATAGATGATCCCGAGATCAAGGCATGGCTAGCCTTGGGCACAAAGACAAAGAAGAAAGGTGGCGGAAAGAAGAAAAAAGGTAAGAAAGAGGACAAGGCTGATGAGACAGCAGAAGCTGAGCCAGTGGACTCAACAAATGAGGCCACATCTCAGGAATGA

Protein sequence

>Msa1058700

MSDDEREEKELDLTSPDVVTKYKTAAEIVNKALKLVISECKPKAKVVEICEKGDSFIREQTSNVYKNVKKKIERGVAFPTCISVNNTICHFSPLASDETVLEEGDIVKIDLACHIDGFIAAVAHTHVLQEGPITGRAADVIAAANTAAEVALRLVRPGKKNKDVSDAIQKVAAAYDCKIVEGVLSHQLKQFVIDGNKVVLSISNPDTRVDDAEFEENEVYAIDIVTSTGEGKPKLLDEKQTTIYKRAVDKSYHLKMKASRFIFSEISQKFPIMPFSARALEEKRARLGLVECMNHELLQPYPVLHEKPGDFVAHIKFTVLLMPNGSDRVTSHPLQELQPTKTIDDPEIKAWLALGTKTKKKGGGKKKKGKKEDKADETAEAEPVDSTNEATSQE*