Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1154260 | XP_024627019.1 | 98.203 | 612 | 11 | 0 | 1 | 612 | 29 | 640 | 0.0 | 1245 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1154260 | sp|Q9C9Z7|Y3857_ARATH | 62.810 | 605 | 201 | 11 | 21 | 611 | 22 | 616 | 0.0 | 723 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1154260 | A0A396H025 | 98.203 | 612 | 11 | 0 | 1 | 612 | 29 | 640 | 0.0 | 1245 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1026870 | Msa1154260 | 0.905827 | 2.843210e-80 | -8.615850e-47 |
Msa1154260 | Msa1358290 | 0.803954 | 2.724327e-49 | -8.615850e-47 |
Msa0544000 | Msa1154260 | 0.800656 | 1.301227e-48 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1154260 | MtrunA17_Chr7g0245201 | 98.203 | 612 | 11 | 0 | 1 | 612 | 29 | 640 | 0.0 | 1245 |
Msa1154260 | MtrunA17_Chr4g0010091 | 50.950 | 579 | 243 | 11 | 25 | 581 | 26 | 585 | 0.0 | 550 |
Msa1154260 | MtrunA17_Chr1g0195911 | 45.199 | 604 | 293 | 10 | 31 | 612 | 34 | 621 | 1.22e-169 | 496 |
Msa1154260 | MtrunA17_Chr7g0268781 | 44.816 | 598 | 285 | 12 | 31 | 597 | 34 | 617 | 1.43e-164 | 484 |
Msa1154260 | MtrunA17_Chr5g0401451 | 41.694 | 614 | 310 | 16 | 29 | 612 | 35 | 630 | 5.41e-144 | 431 |
Msa1154260 | MtrunA17_Chr4g0053841 | 41.434 | 572 | 301 | 13 | 32 | 581 | 12 | 571 | 1.42e-136 | 411 |
Msa1154260 | MtrunA17_Chr2g0303541 | 38.980 | 549 | 298 | 10 | 36 | 555 | 29 | 569 | 9.37e-122 | 374 |
Msa1154260 | MtrunA17_Chr3g0108331 | 35.919 | 593 | 321 | 11 | 32 | 612 | 23 | 568 | 1.45e-115 | 356 |
Msa1154260 | MtrunA17_Chr2g0285511 | 38.051 | 544 | 291 | 12 | 33 | 549 | 26 | 550 | 1.60e-114 | 354 |
Msa1154260 | MtrunA17_Chr8g0374011 | 33.821 | 683 | 345 | 17 | 7 | 609 | 1 | 656 | 1.59e-112 | 351 |
Msa1154260 | MtrunA17_Chr2g0320691 | 34.032 | 620 | 354 | 14 | 30 | 600 | 18 | 631 | 2.80e-111 | 347 |
Msa1154260 | MtrunA17_Chr4g0050021 | 34.835 | 577 | 312 | 12 | 29 | 549 | 40 | 608 | 7.23e-111 | 347 |
Msa1154260 | MtrunA17_Chr5g0432861 | 34.000 | 600 | 340 | 13 | 29 | 612 | 20 | 579 | 8.06e-107 | 333 |
Msa1154260 | MtrunA17_Chr2g0279481 | 33.993 | 606 | 327 | 15 | 7 | 549 | 19 | 614 | 2.45e-105 | 333 |
Msa1154260 | MtrunA17_Chr1g0181181 | 38.397 | 474 | 267 | 9 | 33 | 495 | 26 | 485 | 2.59e-105 | 329 |
Msa1154260 | MtrunA17_Chr8g0382231 | 35.632 | 522 | 280 | 10 | 2 | 494 | 22 | 516 | 7.50e-100 | 317 |
Msa1154260 | MtrunA17_Chr1g0199631 | 35.740 | 554 | 307 | 15 | 51 | 576 | 8 | 540 | 9.04e-99 | 312 |
Msa1154260 | MtrunA17_Chr5g0412591 | 37.924 | 501 | 238 | 10 | 29 | 489 | 22 | 489 | 4.40e-91 | 293 |
Msa1154260 | MtrunA17_Chr5g0401341 | 37.344 | 482 | 260 | 14 | 29 | 489 | 23 | 483 | 3.41e-90 | 291 |
Msa1154260 | MtrunA17_Chr1g0150191 | 33.898 | 590 | 335 | 15 | 25 | 587 | 19 | 580 | 3.67e-90 | 291 |
Msa1154260 | MtrunA17_Chr8g0367891 | 35.465 | 516 | 280 | 12 | 36 | 525 | 29 | 517 | 7.92e-88 | 285 |
Msa1154260 | MtrunA17_Chr1g0207461 | 33.211 | 545 | 321 | 12 | 23 | 540 | 18 | 546 | 7.23e-86 | 280 |
Msa1154260 | MtrunA17_Chr1g0191711 | 33.190 | 464 | 269 | 10 | 31 | 490 | 56 | 482 | 2.81e-79 | 261 |
Msa1154260 | MtrunA17_Chr4g0076521 | 32.842 | 475 | 296 | 10 | 21 | 487 | 14 | 473 | 1.15e-75 | 253 |
Msa1154260 | MtrunA17_Chr2g0290741 | 32.025 | 484 | 289 | 12 | 16 | 487 | 8 | 463 | 2.42e-66 | 227 |
Msa1154260 | MtrunA17_Chr4g0003891 | 34.230 | 409 | 229 | 9 | 203 | 601 | 44 | 422 | 1.16e-61 | 211 |
Msa1154260 | MtrunA17_Chr2g0332281 | 37.368 | 380 | 212 | 9 | 208 | 580 | 24 | 384 | 4.33e-60 | 206 |
Msa1154260 | MtrunA17_Chr4g0023801 | 29.720 | 572 | 332 | 21 | 36 | 573 | 7 | 542 | 1.23e-54 | 194 |
Msa1154260 | MtrunA17_Chr1g0206621 | 47.059 | 136 | 69 | 3 | 43 | 176 | 77 | 211 | 7.19e-33 | 126 |
Msa1154260 | MtrunA17_Chr1g0163311 | 28.212 | 358 | 200 | 10 | 206 | 554 | 208 | 517 | 2.64e-31 | 128 |
Msa1154260 | MtrunA17_Chr1g0163311 | 34.783 | 115 | 69 | 2 | 42 | 155 | 13 | 122 | 5.69e-12 | 68.6 |
Msa1154260 | MtrunA17_Chr4g0037661 | 28.693 | 352 | 208 | 9 | 206 | 551 | 208 | 522 | 2.94e-31 | 128 |
Msa1154260 | MtrunA17_Chr4g0037661 | 32.540 | 126 | 81 | 3 | 36 | 157 | 6 | 131 | 8.74e-12 | 68.2 |
Msa1154260 | MtrunA17_Chr2g0280541 | 28.212 | 397 | 223 | 10 | 101 | 475 | 2 | 358 | 4.70e-28 | 117 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1154260 | AT3G08570.1 | 62.810 | 605 | 201 | 11 | 21 | 611 | 22 | 616 | 0.0 | 723 |
Msa1154260 | AT3G08660.1 | 60.606 | 594 | 189 | 13 | 24 | 608 | 25 | 582 | 0.0 | 673 |
Msa1154260 | AT3G08660.3 | 59.319 | 558 | 182 | 13 | 60 | 608 | 1 | 522 | 0.0 | 611 |
Msa1154260 | AT5G48800.1 | 48.731 | 591 | 262 | 10 | 29 | 602 | 37 | 603 | 0.0 | 531 |
Msa1154260 | AT1G03010.2 | 45.425 | 612 | 293 | 12 | 31 | 612 | 7 | 607 | 5.36e-166 | 487 |
Msa1154260 | AT1G03010.3 | 45.366 | 615 | 295 | 12 | 28 | 612 | 30 | 633 | 8.08e-166 | 488 |
Msa1154260 | AT1G03010.1 | 45.425 | 612 | 293 | 12 | 31 | 612 | 34 | 634 | 1.88e-165 | 487 |
Msa1154260 | AT3G08660.2 | 57.209 | 430 | 146 | 9 | 24 | 446 | 25 | 423 | 4.28e-159 | 463 |
Msa1154260 | AT2G47860.1 | 42.444 | 622 | 312 | 10 | 13 | 609 | 24 | 624 | 2.45e-154 | 458 |
Msa1154260 | AT2G47860.3 | 41.308 | 627 | 306 | 10 | 31 | 609 | 35 | 647 | 5.83e-149 | 445 |
Msa1154260 | AT5G67385.1 | 41.128 | 603 | 311 | 13 | 32 | 612 | 24 | 604 | 5.85e-138 | 415 |
Msa1154260 | AT5G67385.4 | 40.901 | 577 | 297 | 13 | 58 | 612 | 5 | 559 | 6.54e-129 | 390 |
Msa1154260 | AT5G67385.5 | 40.901 | 577 | 297 | 13 | 58 | 612 | 5 | 559 | 6.54e-129 | 390 |
Msa1154260 | AT5G67385.2 | 40.901 | 577 | 297 | 13 | 58 | 612 | 5 | 559 | 6.54e-129 | 390 |
Msa1154260 | AT5G67385.3 | 40.901 | 577 | 297 | 13 | 58 | 612 | 5 | 559 | 6.54e-129 | 390 |
Msa1154260 | AT2G47860.5 | 41.473 | 516 | 267 | 8 | 119 | 609 | 1 | 506 | 5.18e-120 | 366 |
Msa1154260 | AT2G47860.2 | 41.473 | 516 | 267 | 8 | 119 | 609 | 1 | 506 | 5.18e-120 | 366 |
Msa1154260 | AT1G30440.1 | 38.382 | 581 | 311 | 14 | 36 | 576 | 29 | 602 | 2.85e-116 | 361 |
Msa1154260 | AT5G13600.1 | 37.189 | 562 | 301 | 13 | 36 | 571 | 29 | 564 | 2.22e-110 | 343 |
Msa1154260 | AT5G03250.1 | 38.018 | 555 | 286 | 14 | 33 | 555 | 26 | 554 | 4.11e-110 | 343 |
Msa1154260 | AT2G30520.1 | 34.732 | 596 | 343 | 13 | 32 | 612 | 29 | 593 | 2.67e-108 | 338 |
Msa1154260 | AT5G66560.1 | 35.148 | 643 | 305 | 14 | 9 | 560 | 2 | 623 | 4.41e-106 | 335 |
Msa1154260 | AT3G50840.1 | 37.500 | 600 | 316 | 17 | 25 | 609 | 12 | 567 | 1.31e-105 | 330 |
Msa1154260 | AT3G49970.1 | 35.501 | 569 | 286 | 15 | 45 | 595 | 6 | 511 | 1.56e-105 | 328 |
Msa1154260 | AT3G49970.2 | 35.501 | 569 | 286 | 15 | 45 | 595 | 6 | 511 | 1.56e-105 | 328 |
Msa1154260 | AT5G66560.3 | 35.750 | 607 | 285 | 13 | 45 | 560 | 2 | 594 | 1.71e-103 | 327 |
Msa1154260 | AT2G47860.4 | 42.630 | 441 | 217 | 8 | 13 | 438 | 24 | 443 | 1.60e-102 | 318 |
Msa1154260 | AT2G30520.2 | 34.609 | 575 | 330 | 13 | 53 | 612 | 2 | 545 | 1.83e-102 | 322 |
Msa1154260 | AT2G30520.3 | 34.609 | 575 | 330 | 13 | 53 | 612 | 2 | 545 | 1.83e-102 | 322 |
Msa1154260 | AT3G44820.1 | 32.740 | 562 | 338 | 9 | 33 | 557 | 23 | 581 | 2.13e-102 | 325 |
Msa1154260 | AT5G66560.4 | 38.202 | 534 | 268 | 12 | 75 | 560 | 65 | 584 | 4.04e-102 | 323 |
Msa1154260 | AT2G47860.6 | 41.031 | 446 | 211 | 8 | 31 | 438 | 35 | 466 | 1.84e-97 | 306 |
Msa1154260 | AT3G50840.2 | 36.972 | 568 | 303 | 16 | 57 | 609 | 4 | 531 | 2.47e-97 | 308 |
Msa1154260 | AT3G50840.3 | 36.972 | 568 | 303 | 16 | 57 | 609 | 4 | 531 | 2.47e-97 | 308 |
Msa1154260 | AT2G14820.2 | 34.807 | 543 | 304 | 14 | 32 | 542 | 26 | 550 | 4.05e-91 | 295 |
Msa1154260 | AT2G14820.1 | 34.807 | 543 | 304 | 14 | 32 | 542 | 26 | 550 | 4.05e-91 | 295 |
Msa1154260 | AT1G67900.5 | 34.021 | 582 | 315 | 14 | 29 | 553 | 22 | 591 | 3.09e-86 | 281 |
Msa1154260 | AT1G67900.1 | 34.021 | 582 | 315 | 14 | 29 | 553 | 22 | 591 | 3.09e-86 | 281 |
Msa1154260 | AT1G67900.3 | 34.021 | 582 | 315 | 14 | 29 | 553 | 22 | 591 | 3.09e-86 | 281 |
Msa1154260 | AT1G67900.6 | 34.021 | 582 | 315 | 14 | 29 | 553 | 22 | 591 | 3.09e-86 | 281 |
Msa1154260 | AT1G67900.2 | 34.021 | 582 | 315 | 14 | 29 | 553 | 22 | 591 | 3.09e-86 | 281 |
Msa1154260 | AT1G67900.4 | 34.021 | 582 | 315 | 14 | 29 | 553 | 22 | 591 | 3.09e-86 | 281 |
Msa1154260 | AT4G31820.1 | 33.966 | 527 | 282 | 16 | 31 | 538 | 25 | 504 | 3.94e-83 | 272 |
Msa1154260 | AT5G67440.3 | 34.917 | 484 | 286 | 13 | 29 | 499 | 23 | 490 | 4.58e-81 | 266 |
Msa1154260 | AT5G67440.1 | 34.917 | 484 | 286 | 13 | 29 | 499 | 23 | 490 | 4.58e-81 | 266 |
Msa1154260 | AT2G23050.1 | 33.189 | 461 | 259 | 10 | 46 | 498 | 40 | 459 | 2.82e-80 | 261 |
Msa1154260 | AT5G03250.2 | 35.760 | 467 | 245 | 12 | 119 | 555 | 1 | 442 | 2.19e-79 | 259 |
Msa1154260 | AT5G10250.2 | 31.397 | 551 | 313 | 12 | 31 | 549 | 48 | 565 | 2.65e-79 | 263 |
Msa1154260 | AT4G37590.1 | 32.653 | 490 | 276 | 12 | 29 | 500 | 23 | 476 | 1.50e-76 | 254 |
Msa1154260 | AT5G67440.2 | 35.054 | 465 | 273 | 13 | 48 | 499 | 5 | 453 | 2.01e-76 | 253 |
Msa1154260 | AT5G10250.1 | 31.481 | 540 | 312 | 12 | 31 | 549 | 48 | 550 | 1.80e-75 | 252 |
Msa1154260 | AT3G26490.1 | 32.604 | 503 | 280 | 10 | 29 | 489 | 22 | 507 | 2.00e-74 | 249 |
Msa1154260 | AT3G26490.3 | 32.604 | 503 | 280 | 10 | 29 | 489 | 22 | 507 | 2.00e-74 | 249 |
Msa1154260 | AT3G26490.4 | 32.604 | 503 | 280 | 10 | 29 | 489 | 22 | 507 | 2.00e-74 | 249 |
Msa1154260 | AT5G66560.2 | 34.469 | 499 | 237 | 11 | 9 | 438 | 2 | 479 | 2.76e-74 | 246 |
Msa1154260 | AT4G31820.2 | 34.792 | 457 | 245 | 15 | 60 | 497 | 1 | 423 | 8.26e-74 | 246 |
Msa1154260 | AT5G47800.3 | 29.560 | 477 | 312 | 9 | 29 | 499 | 22 | 480 | 1.74e-65 | 224 |
Msa1154260 | AT5G47800.1 | 29.560 | 477 | 312 | 9 | 29 | 499 | 22 | 480 | 1.74e-65 | 224 |
Msa1154260 | AT5G47800.4 | 29.560 | 477 | 312 | 9 | 29 | 499 | 22 | 480 | 1.74e-65 | 224 |
Msa1154260 | AT5G47800.2 | 29.560 | 477 | 312 | 9 | 29 | 499 | 135 | 593 | 1.26e-64 | 225 |
Msa1154260 | AT1G52770.1 | 36.908 | 401 | 218 | 9 | 201 | 586 | 23 | 403 | 5.86e-64 | 218 |
Msa1154260 | AT5G64330.1 | 35.143 | 350 | 186 | 8 | 272 | 584 | 371 | 716 | 2.43e-55 | 200 |
Msa1154260 | AT5G64330.1 | 33.696 | 276 | 152 | 5 | 7 | 254 | 26 | 298 | 1.01e-38 | 152 |
Msa1154260 | AT3G26490.2 | 30.684 | 453 | 255 | 10 | 29 | 439 | 22 | 457 | 3.50e-55 | 195 |
Msa1154260 | AT2G23050.2 | 31.510 | 384 | 218 | 9 | 119 | 498 | 1 | 343 | 4.86e-55 | 191 |
Msa1154260 | AT5G64330.3 | 42.105 | 247 | 120 | 4 | 272 | 498 | 312 | 555 | 9.21e-53 | 191 |
Msa1154260 | AT5G64330.3 | 34.426 | 244 | 125 | 6 | 41 | 254 | 1 | 239 | 2.43e-34 | 138 |
Msa1154260 | AT5G64330.2 | 42.105 | 247 | 120 | 4 | 272 | 498 | 371 | 614 | 2.28e-52 | 191 |
Msa1154260 | AT5G64330.2 | 33.696 | 276 | 152 | 5 | 7 | 254 | 26 | 298 | 7.07e-39 | 152 |
Msa1154260 | AT3G15570.1 | 36.424 | 302 | 160 | 7 | 208 | 494 | 29 | 313 | 2.90e-52 | 186 |
Msa1154260 | AT5G48130.1 | 29.039 | 489 | 275 | 13 | 33 | 498 | 39 | 478 | 8.71e-52 | 189 |
Msa1154260 | AT3G19850.1 | 28.513 | 491 | 281 | 13 | 36 | 488 | 6 | 464 | 2.20e-49 | 181 |
Msa1154260 | AT3G22104.1 | 29.437 | 462 | 259 | 14 | 34 | 474 | 5 | 420 | 3.49e-45 | 168 |
Msa1154260 | AT3G03510.1 | 27.427 | 412 | 243 | 9 | 88 | 495 | 8 | 367 | 1.65e-43 | 162 |
Msa1154260 | AT1G50280.1 | 27.615 | 478 | 293 | 13 | 36 | 483 | 6 | 460 | 3.72e-41 | 157 |
Msa1154260 | AT1G50280.2 | 27.752 | 436 | 267 | 11 | 73 | 483 | 15 | 427 | 4.02e-38 | 147 |
Msa1154260 | AT3G22104.4 | 30.155 | 388 | 206 | 12 | 106 | 474 | 4 | 345 | 3.24e-34 | 135 |
Msa1154260 | AT3G22104.2 | 30.155 | 388 | 206 | 12 | 106 | 474 | 4 | 345 | 3.24e-34 | 135 |
Msa1154260 | AT3G22104.3 | 30.155 | 388 | 206 | 12 | 106 | 474 | 4 | 345 | 3.24e-34 | 135 |
Msa1154260 | AT5G17580.2 | 26.205 | 477 | 309 | 12 | 31 | 495 | 18 | 463 | 6.45e-34 | 136 |
Msa1154260 | AT5G17580.1 | 26.205 | 477 | 309 | 12 | 31 | 495 | 3 | 448 | 1.50e-33 | 135 |
Msa1154260 | AT3G49900.1 | 28.512 | 242 | 136 | 10 | 389 | 599 | 198 | 433 | 1.66e-12 | 70.5 |
Msa1154260 | AT3G49900.2 | 28.163 | 245 | 136 | 11 | 389 | 599 | 198 | 436 | 6.22e-11 | 65.5 |
Find 184 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAAATGTTTCTCTTCATCTT+TGG | 0.209542 | 7_4:+41709634 | Msa1154260:three_prime_UTR |
GGTATTCTTCTGTCATTTCT+AGG | 0.221446 | 7_4:-41707875 | None:intergenic |
CAATCATCCGTACACATTAT+TGG | 0.231204 | 7_4:+41706412 | Msa1154260:five_prime_UTR |
TGCAAAGAGCAATTAGTTTC+TGG | 0.240250 | 7_4:+41708065 | Msa1154260:CDS |
AAAAGTTGTGTTAGTGTATA+TGG | 0.266044 | 7_4:+41706317 | Msa1154260:five_prime_UTR |
GTGTAAGAGTTGCAAAATTT+AGG | 0.283416 | 7_4:-41706655 | None:intergenic |
CTGGTGTCCTCCTGGAAAAT+TGG | 0.284753 | 7_4:-41707763 | None:intergenic |
CTTGTTCTGTTAATGCTGTA+TGG | 0.294581 | 7_4:-41709022 | None:intergenic |
ATCTCCTCCACTATATTTAG+AGG | 0.297450 | 7_4:-41707999 | None:intergenic |
ATTCCCTTGACTTTCTTGTT+TGG | 0.326393 | 7_4:+41708407 | Msa1154260:CDS |
ATTTGTCAAACTTGCTCCTT+AGG | 0.330918 | 7_4:+41709871 | Msa1154260:three_prime_UTR |
TTGAAAGAAGGATATCATTA+AGG | 0.332998 | 7_4:+41708483 | Msa1154260:CDS |
ACACTGTGATGGTGAATCTA+AGG | 0.338620 | 7_4:+41708100 | Msa1154260:CDS |
ATGATTGATAAAGCAGAAAA+TGG | 0.344798 | 7_4:+41709374 | Msa1154260:CDS |
CTGGAATCGTCTTAGATTGC+AGG | 0.350034 | 7_4:-41709703 | None:intergenic |
AATGCCGTGTCGGGGAGTTC+AGG | 0.363949 | 7_4:+41709179 | Msa1154260:CDS |
TATTGCTGTATGGGAAGTTA+AGG | 0.371809 | 7_4:-41709962 | None:intergenic |
TGGCTTCAGCAACCATCTTC+CGG | 0.381051 | 7_4:-41707707 | None:intergenic |
CTAGGATTTGTATTGCTGTA+TGG | 0.382092 | 7_4:-41709972 | None:intergenic |
TCCGATGGGATTGGTTCTAA+TGG | 0.384085 | 7_4:+41708650 | Msa1154260:CDS |
CAAACATCACTGAAGGGTAT+TGG | 0.387098 | 7_4:+41708263 | Msa1154260:CDS |
GATATCATTAAGGTTGGAAA+TGG | 0.388010 | 7_4:+41708493 | Msa1154260:CDS |
AAACATCACTGAAGGGTATT+GGG | 0.388227 | 7_4:+41708264 | Msa1154260:CDS |
GCAGTGTCTCTGTGTGCATC+TGG | 0.397290 | 7_4:-41709722 | None:intergenic |
CTTGTTTGGCATGTTAAAGA+TGG | 0.398461 | 7_4:+41708421 | Msa1154260:CDS |
GTATTGGGAAGTGTCAATTA+TGG | 0.400883 | 7_4:+41708279 | Msa1154260:CDS |
AGCCGTCGACATTTATTTGA+AGG | 0.403248 | 7_4:+41708820 | Msa1154260:CDS |
TGAAACACTGGAACCCTTGT+TGG | 0.405530 | 7_4:-41707727 | None:intergenic |
TTTGCAACTCTTACACTACT+AGG | 0.408962 | 7_4:+41706662 | Msa1154260:CDS |
CAAGTTCAATTGCGAAACTA+AGG | 0.414838 | 7_4:-41709658 | None:intergenic |
TTAAAGATGGCTATCATGTT+AGG | 0.417004 | 7_4:+41708434 | Msa1154260:CDS |
TGAAAATAAAACTAAGGAAA+AGG | 0.419108 | 7_4:-41706541 | None:intergenic |
CTTTCAAGCTCAAGCCTACA+TGG | 0.421438 | 7_4:-41708467 | None:intergenic |
GTACGGATGATTGCAGGTTC+AGG | 0.422116 | 7_4:-41706402 | None:intergenic |
TATATGTGCCATGGGAAGAA+TGG | 0.424923 | 7_4:+41708196 | Msa1154260:CDS |
CTTCCGGATCTTCCCACTTA+GGG | 0.425399 | 7_4:-41707691 | None:intergenic |
TCAAATGTCTGGTGTCCTCC+TGG | 0.430176 | 7_4:-41707771 | None:intergenic |
TTGTTCTGTTAATGCTGTAT+GGG | 0.435254 | 7_4:-41709021 | None:intergenic |
TGTAAACTTAAGCAAGGATC+AGG | 0.435983 | 7_4:-41708731 | None:intergenic |
TCGCTTCCGCAACTCAAACT+AGG | 0.437173 | 7_4:-41709990 | None:intergenic |
TGGTGTCCTCCTGGAAAATT+GGG | 0.437510 | 7_4:-41707762 | None:intergenic |
AAGAAGGATATCATTAAGGT+TGG | 0.441280 | 7_4:+41708487 | Msa1154260:CDS |
TCAATGACACGAGCATAATC+AGG | 0.441641 | 7_4:-41708782 | None:intergenic |
TAATGTGTACGGATGATTGC+AGG | 0.442042 | 7_4:-41706408 | None:intergenic |
ATATGTGCCATGGGAAGAAT+GGG | 0.445842 | 7_4:+41708197 | Msa1154260:CDS |
GGGTTCCAGTGTTTCAAACT+TGG | 0.447494 | 7_4:+41707734 | Msa1154260:CDS |
TGCAATTCTTCCTATCCCCT+TGG | 0.448238 | 7_4:-41709420 | None:intergenic |
GACATTACAATTGTTGTTGA+TGG | 0.448885 | 7_4:+41707292 | Msa1154260:CDS |
GTTGCAAAATTTAGGAGTAG+TGG | 0.451556 | 7_4:-41706647 | None:intergenic |
TGGTGAATCTAAGGAAATAA+AGG | 0.452867 | 7_4:+41708109 | Msa1154260:CDS |
AGCTGGAGATTTCAAGATTG+AGG | 0.454447 | 7_4:+41709303 | Msa1154260:CDS |
TCATCGCAAGTTCAAATGTC+TGG | 0.454966 | 7_4:-41707782 | None:intergenic |
CGAGTGCAGCCATGTCTCCT+AGG | 0.456610 | 7_4:+41709240 | Msa1154260:CDS |
CAAGAAAGTCAAGGGAATGA+TGG | 0.459394 | 7_4:-41708402 | None:intergenic |
GTCAATTATGGAATCAATCA+AGG | 0.462880 | 7_4:+41708291 | Msa1154260:CDS |
CTCAGCTGCACAACGTAGTC+GGG | 0.466601 | 7_4:-41707850 | None:intergenic |
CTTGCGATGAAGTTCTGTTA+TGG | 0.470748 | 7_4:+41707795 | Msa1154260:CDS |
ATTGTGATGGTCACCTGAAA+AGG | 0.478641 | 7_4:-41709595 | None:intergenic |
TCTTCCGGATCTTCCCACTT+AGG | 0.479881 | 7_4:-41707692 | None:intergenic |
TAGGATTTGTATTGCTGTAT+GGG | 0.482312 | 7_4:-41709971 | None:intergenic |
TTTCCCTTGGTTACCCTAAG+TGG | 0.486130 | 7_4:+41707678 | Msa1154260:CDS |
CCATGGCACATATAACTCTC+TGG | 0.487049 | 7_4:-41708187 | None:intergenic |
AAGTCCAACTACTATAGAAA+AGG | 0.489212 | 7_4:+41708322 | Msa1154260:CDS |
TTACCCTAAGTGGGAAGATC+CGG | 0.489913 | 7_4:+41707688 | Msa1154260:CDS |
TTGTTGCAGTGGCTACCAAC+AGG | 0.491935 | 7_4:+41709745 | Msa1154260:three_prime_UTR |
GCTGGAGATTTCAAGATTGA+GGG | 0.494686 | 7_4:+41709304 | Msa1154260:CDS |
TTTCCTTTCCTAGCAACCTA+AGG | 0.495523 | 7_4:-41709887 | None:intergenic |
TAGAAATGACAGAAGAATAC+CGG | 0.497733 | 7_4:+41707877 | Msa1154260:CDS |
ACACCTCCATTCCTTTCTGT+TGG | 0.498389 | 7_4:+41709826 | Msa1154260:three_prime_UTR |
GCTCTTCCTCCTTGTGTCTG+AGG | 0.498730 | 7_4:-41706516 | None:intergenic |
GGATATGAATCCGATGGGAT+TGG | 0.499189 | 7_4:+41708641 | Msa1154260:CDS |
AGCGCAACTGCTCAAAATAC+AGG | 0.499703 | 7_4:-41709151 | None:intergenic |
AGAGAATCGAGAACTGAAGC+TGG | 0.499912 | 7_4:+41709286 | Msa1154260:CDS |
AGGAAGTCTAGGGGAACAGA+GGG | 0.501713 | 7_4:+41709485 | Msa1154260:CDS |
TTCTTTACCTCTCTTTCCAA+GGG | 0.502762 | 7_4:+41709404 | Msa1154260:CDS |
GTGTCGGGGAGTTCAGGAGA+TGG | 0.504014 | 7_4:+41709185 | Msa1154260:CDS |
GTTCATCATGTAGTTTCCCT+TGG | 0.504486 | 7_4:+41707665 | Msa1154260:intron |
ACATTACAATTGTTGTTGAT+GGG | 0.505506 | 7_4:+41707293 | Msa1154260:CDS |
ACCATGCTGCACAGAATGAC+AGG | 0.507865 | 7_4:+41709102 | Msa1154260:CDS |
AAATTTAGGAGTAGTGGTAG+TGG | 0.508904 | 7_4:-41706641 | None:intergenic |
TAGTTTCTACAATTGTCCTC+TGG | 0.511419 | 7_4:-41708346 | None:intergenic |
TTTCTTTACCTCTCTTTCCA+AGG | 0.515094 | 7_4:+41709403 | Msa1154260:CDS |
AGATTTCAAGATTGAGGGTG+AGG | 0.515783 | 7_4:+41709309 | Msa1154260:CDS |
AAAGAGTGAAAATAAAACTA+AGG | 0.516545 | 7_4:-41706547 | None:intergenic |
TGTCGGGGAGTTCAGGAGAT+GGG | 0.520284 | 7_4:+41709186 | Msa1154260:CDS |
AAAAGCAAGTAGGAAGTCTA+GGG | 0.521721 | 7_4:+41709475 | Msa1154260:CDS |
CATAGTTCTCTGCTAAAAGT+AGG | 0.521946 | 7_4:+41708674 | Msa1154260:CDS |
CTCTTTGTAACGGGATAGGA+AGG | 0.523039 | 7_4:+41706564 | Msa1154260:five_prime_UTR |
GAGGAGATAGAAATCACAAA+AGG | 0.526489 | 7_4:+41708014 | Msa1154260:CDS |
GCTCCTTAGGTTGCTAGGAA+AGG | 0.526916 | 7_4:+41709884 | Msa1154260:three_prime_UTR |
GAGGAAGAAGCGGAAGACTA+CGG | 0.527391 | 7_4:+41708620 | Msa1154260:CDS |
TCCTATCCCCTTGGAAAGAG+AGG | 0.527410 | 7_4:-41709411 | None:intergenic |
GGAGTCATTTCTGCTACATA+AGG | 0.529774 | 7_4:+41707315 | Msa1154260:CDS |
GAGGGTGAGGCTGAGTGAGT+TGG | 0.529782 | 7_4:+41709322 | Msa1154260:CDS |
AATTGATTGCTATGTGTTGA+GGG | 0.530471 | 7_4:+41706351 | Msa1154260:five_prime_UTR |
ACCTCTCTTTCCAAGGGGAT+AGG | 0.535768 | 7_4:+41709410 | Msa1154260:CDS |
AACTTGCTCCTTAGGTTGCT+AGG | 0.536109 | 7_4:+41709879 | Msa1154260:three_prime_UTR |
ACTCAGCTGCACAACGTAGT+CGG | 0.537711 | 7_4:-41707851 | None:intergenic |
GAGTCTCCACTCTGCAGAGA+TGG | 0.538497 | 7_4:-41708539 | None:intergenic |
CCAGAGAGTTATATGTGCCA+TGG | 0.541278 | 7_4:+41708187 | Msa1154260:CDS |
TAGGAGATATTCTCTCTCAT+AGG | 0.541681 | 7_4:+41709523 | Msa1154260:CDS |
GGTGTTATGCCTCTGCGACT+AGG | 0.541721 | 7_4:-41709808 | None:intergenic |
CAAACTGTAGCTTATAGCTA+TGG | 0.550167 | 7_4:-41706451 | None:intergenic |
TTCACTCTTTGTAACGGGAT+AGG | 0.551855 | 7_4:+41706560 | Msa1154260:five_prime_UTR |
TAGGAAGTCTAGGGGAACAG+AGG | 0.551922 | 7_4:+41709484 | Msa1154260:CDS |
GAGGCTGAGTGAGTTGGAGA+AGG | 0.553823 | 7_4:+41709328 | Msa1154260:CDS |
ACATTACAAGATGTGGAGAA+TGG | 0.554501 | 7_4:+41709785 | Msa1154260:three_prime_UTR |
TTCCCTTGGTTACCCTAAGT+GGG | 0.556169 | 7_4:+41707679 | Msa1154260:CDS |
AGAGACACTGCTTGTTGCAG+TGG | 0.557772 | 7_4:+41709734 | Msa1154260:three_prime_UTR |
AAGTGGGAAGATCCGGAAGA+TGG | 0.559265 | 7_4:+41707695 | Msa1154260:CDS |
AACTGTATCCACGTCAAACA+AGG | 0.561755 | 7_4:-41708561 | None:intergenic |
TTATGCTCAAACATCACTGA+AGG | 0.563509 | 7_4:+41708256 | Msa1154260:CDS |
AAGCTCCAAGTTTGAAACAC+TGG | 0.565146 | 7_4:-41707739 | None:intergenic |
AAGCTCAAGCCTACATGGAA+TGG | 0.565173 | 7_4:-41708462 | None:intergenic |
CTATCATCCAATAATGTGTA+CGG | 0.566905 | 7_4:-41706419 | None:intergenic |
CAGAGAGTTATATGTGCCAT+GGG | 0.567364 | 7_4:+41708188 | Msa1154260:CDS |
CTAGGAGACATGGCTGCACT+CGG | 0.571055 | 7_4:-41709239 | None:intergenic |
AAACACTACATTACAAGATG+TGG | 0.571710 | 7_4:+41709778 | Msa1154260:three_prime_UTR |
TGACAGGCTTCCACTGCAGA+TGG | 0.573993 | 7_4:+41709118 | Msa1154260:CDS |
ATGCCAAACAAGAAAGTCAA+GGG | 0.574699 | 7_4:-41708410 | None:intergenic |
ATCACAATGTGTAAATGAGT+TGG | 0.575755 | 7_4:+41709610 | Msa1154260:three_prime_UTR |
TGAAAAGGTAGAAATAATAG+CGG | 0.575889 | 7_4:-41709580 | None:intergenic |
TACTAGAGAATTTCTTGCTG+CGG | 0.576816 | 7_4:+41708591 | Msa1154260:CDS |
ATTTAGAGGTAACATCTCAC+AGG | 0.576926 | 7_4:-41707985 | None:intergenic |
GATGGTTGCTGAAGCCAACA+AGG | 0.578445 | 7_4:+41707713 | Msa1154260:CDS |
TTGACGTGGATACAGTTCAC+AGG | 0.579795 | 7_4:+41708567 | Msa1154260:CDS |
TAGGTGCCACCATTCCATGT+AGG | 0.580216 | 7_4:+41708453 | Msa1154260:CDS |
TAATTGATTGCTATGTGTTG+AGG | 0.582794 | 7_4:+41706350 | Msa1154260:five_prime_UTR |
TTGTCTTTCAAAATCTTCAG+AGG | 0.582903 | 7_4:+41707943 | Msa1154260:CDS |
AGTGATGCGTAGTTGTCCCT+AGG | 0.583178 | 7_4:-41709257 | None:intergenic |
TGTTTAATGATGCTTCCTGT+TGG | 0.585892 | 7_4:-41709760 | None:intergenic |
CATTACAATTGTTGTTGATG+GGG | 0.586267 | 7_4:+41707294 | Msa1154260:CDS |
GCCTGTCATTCTGTGCAGCA+TGG | 0.587678 | 7_4:-41709103 | None:intergenic |
AGAAATCACAAAAGGATCTG+TGG | 0.587984 | 7_4:+41708022 | Msa1154260:CDS |
GACTACGGATATGAATCCGA+TGG | 0.588057 | 7_4:+41708635 | Msa1154260:CDS |
TTTCTTGCTGCGGATTGAAG+AGG | 0.588755 | 7_4:+41708601 | Msa1154260:CDS |
GTAGGCTTGAGCTTGAAAGA+AGG | 0.589390 | 7_4:+41708471 | Msa1154260:CDS |
TATGCTCGTGTCATTGATGA+TGG | 0.590269 | 7_4:+41708788 | Msa1154260:CDS |
ACAAATCCTAGTTTGAGTTG+CGG | 0.591389 | 7_4:+41709984 | Msa1154260:three_prime_UTR |
TACCTTCAAATAAATGTCGA+CGG | 0.594449 | 7_4:-41708822 | None:intergenic |
AACTCATTTACACATTGTGA+TGG | 0.597218 | 7_4:-41709608 | None:intergenic |
TGGAATCGTCTTAGATTGCA+GGG | 0.600775 | 7_4:-41709702 | None:intergenic |
GCGGATTGAAGAGGAAGAAG+CGG | 0.602675 | 7_4:+41708610 | Msa1154260:CDS |
GAAAAGGTAGAAATAATAGC+GGG | 0.603402 | 7_4:-41709579 | None:intergenic |
GAGTGCAGCCATGTCTCCTA+GGG | 0.603694 | 7_4:+41709241 | Msa1154260:CDS |
AGGACGCCAACAGAAAGGAA+TGG | 0.603917 | 7_4:-41709832 | None:intergenic |
CATGCCAAACAAGAAAGTCA+AGG | 0.605476 | 7_4:-41708411 | None:intergenic |
TTATCTAAATTACACTGTGA+TGG | 0.607505 | 7_4:+41708089 | Msa1154260:CDS |
GATGTTACCTCTAAATATAG+TGG | 0.608574 | 7_4:+41707992 | Msa1154260:CDS |
GTAGTTGTCCCTAGGAGACA+TGG | 0.609118 | 7_4:-41709249 | None:intergenic |
AATTTCTGTAAACTTAAGCA+AGG | 0.609664 | 7_4:-41708737 | None:intergenic |
GGAAATAAAGGATGAGTGCG+TGG | 0.609921 | 7_4:+41708121 | Msa1154260:CDS |
TCCATTAGAACCAATCCCAT+CGG | 0.611977 | 7_4:-41708651 | None:intergenic |
TCAAAATCTTCAGAGGTCAG+TGG | 0.615237 | 7_4:+41707950 | Msa1154260:CDS |
TGGAGACTCCTTGTTTGACG+TGG | 0.616985 | 7_4:+41708553 | Msa1154260:CDS |
ACTACGGATATGAATCCGAT+GGG | 0.617539 | 7_4:+41708636 | Msa1154260:CDS |
AAATATCTGTTCTTGAGACG+AGG | 0.617565 | 7_4:-41707908 | None:intergenic |
CTCAAGCCTACATGGAATGG+TGG | 0.617895 | 7_4:-41708459 | None:intergenic |
CTTCCCACTTAGGGTAACCA+AGG | 0.621549 | 7_4:-41707682 | None:intergenic |
ATCTCCTGAACTCCCCGACA+CGG | 0.634657 | 7_4:-41709183 | None:intergenic |
ACTTGTACCACCATCTGCAG+TGG | 0.636178 | 7_4:-41709128 | None:intergenic |
GAGCAAATGTTCATGAAACA+AGG | 0.641551 | 7_4:+41709350 | Msa1154260:CDS |
GTTACCTCTAAATATAGTGG+AGG | 0.652145 | 7_4:+41707995 | Msa1154260:CDS |
AGAAATGACAGAAGAATACC+GGG | 0.655554 | 7_4:+41707878 | Msa1154260:CDS |
TCTTTACCTCTCTTTCCAAG+GGG | 0.657565 | 7_4:+41709405 | Msa1154260:CDS |
CAGGCTTCCACTGCAGATGG+TGG | 0.658123 | 7_4:+41709121 | Msa1154260:CDS |
AGGATGAGTGCGTGGCATGG+TGG | 0.659308 | 7_4:+41708129 | Msa1154260:CDS |
CTTATACCATCTCTGCAGAG+TGG | 0.662626 | 7_4:+41708533 | Msa1154260:CDS |
GCAGACACACCTCAGACACA+AGG | 0.663549 | 7_4:+41706507 | Msa1154260:five_prime_UTR |
TAAAGGATGAGTGCGTGGCA+TGG | 0.669308 | 7_4:+41708126 | Msa1154260:CDS |
TATGCTCAAACATCACTGAA+GGG | 0.669855 | 7_4:+41708257 | Msa1154260:CDS |
GGAGAATGGCCTAGTCGCAG+AGG | 0.671003 | 7_4:+41709799 | Msa1154260:three_prime_UTR |
TTCCCACTTAGGGTAACCAA+GGG | 0.672159 | 7_4:-41707681 | None:intergenic |
CTACTATAGAAAAGGACCAG+AGG | 0.676803 | 7_4:+41708330 | Msa1154260:CDS |
ATTGCAGGGACTATGAAGAG+TGG | 0.686741 | 7_4:-41709688 | None:intergenic |
ATGTGCCATGGGAAGAATGG+GGG | 0.687594 | 7_4:+41708199 | Msa1154260:CDS |
GACACACCTCAGACACAAGG+AGG | 0.691013 | 7_4:+41706510 | Msa1154260:five_prime_UTR |
ACGCCAACAGAAAGGAATGG+AGG | 0.698256 | 7_4:-41709829 | None:intergenic |
ATGGTTGCTGAAGCCAACAA+GGG | 0.702263 | 7_4:+41707714 | Msa1154260:CDS |
AAAGCAAGTAGGAAGTCTAG+GGG | 0.706742 | 7_4:+41709476 | Msa1154260:CDS |
GGAAGTCTAGGGGAACAGAG+GGG | 0.710110 | 7_4:+41709486 | Msa1154260:CDS |
TATGTGCCATGGGAAGAATG+GGG | 0.721508 | 7_4:+41708198 | Msa1154260:CDS |
CTATCACAGAGAATAAGTAG+CGG | 0.734925 | 7_4:+41709212 | Msa1154260:CDS |
GGGACAACTACGCATCACTG+CGG | 0.795492 | 7_4:+41709261 | Msa1154260:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAAGTTTTATATGATAAATT+TGG | + | chr7_4:41707378-41707397 | Msa1154260:intron | 10.0% |
!!! | TTCTTTTCATTTTTATAACA+TGG | - | chr7_4:41706298-41706317 | None:intergenic | 15.0% |
!! | ATATTTATGGATTCTAATTA+AGG | - | chr7_4:41707448-41707467 | None:intergenic | 15.0% |
!! | AATTCATGTTAACATATTTA+TGG | - | chr7_4:41707461-41707480 | None:intergenic | 15.0% |
!!! | AAATACATTGTATCATTTTA+AGG | - | chr7_4:41709855-41709874 | None:intergenic | 15.0% |
!! | TGAAAATAAAACTAAGGAAA+AGG | - | chr7_4:41706544-41706563 | None:intergenic | 20.0% |
!! | AAAGAGTGAAAATAAAACTA+AGG | - | chr7_4:41706550-41706569 | None:intergenic | 20.0% |
!!! | TTTATTTTCACTCTTTGTAA+CGG | + | chr7_4:41706554-41706573 | Msa1154260:five_prime_UTR | 20.0% |
!! | AAGAAGCAAAAGATAAATAA+GGG | - | chr7_4:41706713-41706732 | None:intergenic | 20.0% |
!! | TAAGAAGCAAAAGATAAATA+AGG | - | chr7_4:41706714-41706733 | None:intergenic | 20.0% |
!!! | AATCATGTTTTTCTTCTTTA+TGG | + | chr7_4:41707244-41707263 | Msa1154260:intron | 20.0% |
!! | AAATTTGGTTATTATGACTT+TGG | + | chr7_4:41707393-41707412 | Msa1154260:intron | 20.0% |
!! | TAATATGAGTATTCAAAAGA+TGG | - | chr7_4:41707536-41707555 | None:intergenic | 20.0% |
!!! | TAAAAGCTAATTTGTTGTAA+TGG | + | chr7_4:41707643-41707662 | Msa1154260:intron | 20.0% |
! | AAAAGTTGTGTTAGTGTATA+TGG | + | chr7_4:41706317-41706336 | Msa1154260:five_prime_UTR | 25.0% |
!! | TTATTTTCACTCTTTGTAAC+GGG | + | chr7_4:41706555-41706574 | Msa1154260:five_prime_UTR | 25.0% |
! | GAAGGAAGAAAAAACAAATA+TGG | + | chr7_4:41706582-41706601 | Msa1154260:exon | 25.0% |
! | AGAAGCAAAAGATAAATAAG+GGG | - | chr7_4:41706712-41706731 | None:intergenic | 25.0% |
! | GTGTATTGTACTGTATTATA+TGG | + | chr7_4:41706754-41706773 | Msa1154260:intron | 25.0% |
! | GAATTAAGATTAAGATGCTT+TGG | + | chr7_4:41707143-41707162 | Msa1154260:intron | 25.0% |
!! | ACATTACAATTGTTGTTGAT+GGG | + | chr7_4:41707293-41707312 | Msa1154260:CDS | 25.0% |
! | TTTCTTTGGTATTTCAAAGT+AGG | - | chr7_4:41707499-41707518 | None:intergenic | 25.0% |
! | TTATCTAAATTACACTGTGA+TGG | + | chr7_4:41708089-41708108 | Msa1154260:CDS | 25.0% |
! | TTGAAAGAAGGATATCATTA+AGG | + | chr7_4:41708483-41708502 | Msa1154260:CDS | 25.0% |
! | AATTTCTGTAAACTTAAGCA+AGG | - | chr7_4:41708740-41708759 | None:intergenic | 25.0% |
! | ACAATTAAGTGCCTAAATAT+TGG | - | chr7_4:41708885-41708904 | None:intergenic | 25.0% |
! | ATGATTGATAAAGCAGAAAA+TGG | + | chr7_4:41709374-41709393 | Msa1154260:CDS | 25.0% |
! | TGAAAAGGTAGAAATAATAG+CGG | - | chr7_4:41709583-41709602 | None:intergenic | 25.0% |
TAATTGATTGCTATGTGTTG+AGG | + | chr7_4:41706350-41706369 | Msa1154260:five_prime_UTR | 30.0% | |
AATTGATTGCTATGTGTTGA+GGG | + | chr7_4:41706351-41706370 | Msa1154260:five_prime_UTR | 30.0% | |
CTATCATCCAATAATGTGTA+CGG | - | chr7_4:41706422-41706441 | None:intergenic | 30.0% | |
GTGTAAGAGTTGCAAAATTT+AGG | - | chr7_4:41706658-41706677 | None:intergenic | 30.0% | |
TACTAGGTACTTCAGTAATA+AGG | + | chr7_4:41706678-41706697 | Msa1154260:intron | 30.0% | |
! | ATGTTTTTCTTCTTTATGGC+AGG | + | chr7_4:41707248-41707267 | Msa1154260:intron | 30.0% |
! | GACATTACAATTGTTGTTGA+TGG | + | chr7_4:41707292-41707311 | Msa1154260:CDS | 30.0% |
! | CATTACAATTGTTGTTGATG+GGG | + | chr7_4:41707294-41707313 | Msa1154260:CDS | 30.0% |
AATTGAATATGTACGAGGTT+AGG | - | chr7_4:41707357-41707376 | None:intergenic | 30.0% | |
CTTACAATTGAATATGTACG+AGG | - | chr7_4:41707362-41707381 | None:intergenic | 30.0% | |
GACTTTGGATTTCTATGAAT+TGG | + | chr7_4:41707408-41707427 | Msa1154260:intron | 30.0% | |
ATTTCAAAGTAGGCACTTAT+GGG | - | chr7_4:41707489-41707508 | None:intergenic | 30.0% | |
TATTTCAAAGTAGGCACTTA+TGG | - | chr7_4:41707490-41707509 | None:intergenic | 30.0% | |
!!! | AAGGCATCAACTTTTTTCTT+TGG | - | chr7_4:41707513-41707532 | None:intergenic | 30.0% |
ATGAGTATTCAAAAGATGGA+AGG | - | chr7_4:41707532-41707551 | None:intergenic | 30.0% | |
TAGAAATGACAGAAGAATAC+CGG | + | chr7_4:41707877-41707896 | Msa1154260:CDS | 30.0% | |
TTGTCTTTCAAAATCTTCAG+AGG | + | chr7_4:41707943-41707962 | Msa1154260:CDS | 30.0% | |
GATGTTACCTCTAAATATAG+TGG | + | chr7_4:41707992-41708011 | Msa1154260:CDS | 30.0% | |
TGGTGAATCTAAGGAAATAA+AGG | + | chr7_4:41708109-41708128 | Msa1154260:CDS | 30.0% | |
GTCAATTATGGAATCAATCA+AGG | + | chr7_4:41708291-41708310 | Msa1154260:CDS | 30.0% | |
AAGTCCAACTACTATAGAAA+AGG | + | chr7_4:41708322-41708341 | Msa1154260:CDS | 30.0% | |
TTAAAGATGGCTATCATGTT+AGG | + | chr7_4:41708434-41708453 | Msa1154260:CDS | 30.0% | |
AAGAAGGATATCATTAAGGT+TGG | + | chr7_4:41708487-41708506 | Msa1154260:CDS | 30.0% | |
GATATCATTAAGGTTGGAAA+TGG | + | chr7_4:41708493-41708512 | Msa1154260:CDS | 30.0% | |
TACCTTCAAATAAATGTCGA+CGG | - | chr7_4:41708825-41708844 | None:intergenic | 30.0% | |
TTTCCCTGATTCCAATATTT+AGG | + | chr7_4:41708871-41708890 | Msa1154260:intron | 30.0% | |
! | CTTTTGCAAGATTGAGAATA+TGG | - | chr7_4:41708912-41708931 | None:intergenic | 30.0% |
TTGTTCTGTTAATGCTGTAT+GGG | - | chr7_4:41709024-41709043 | None:intergenic | 30.0% | |
!! | ATTGCAAATTTTAGCAGTCA+AGG | + | chr7_4:41709437-41709456 | Msa1154260:CDS | 30.0% |
GAAAAGGTAGAAATAATAGC+GGG | - | chr7_4:41709582-41709601 | None:intergenic | 30.0% | |
!!! | GCTATTATTTCTACCTTTTC+AGG | + | chr7_4:41709582-41709601 | Msa1154260:three_prime_UTR | 30.0% |
AACTCATTTACACATTGTGA+TGG | - | chr7_4:41709611-41709630 | None:intergenic | 30.0% | |
ATCACAATGTGTAAATGAGT+TGG | + | chr7_4:41709610-41709629 | Msa1154260:three_prime_UTR | 30.0% | |
CAAATGTTTCTCTTCATCTT+TGG | + | chr7_4:41709634-41709653 | Msa1154260:three_prime_UTR | 30.0% | |
AAACACTACATTACAAGATG+TGG | + | chr7_4:41709778-41709797 | Msa1154260:three_prime_UTR | 30.0% | |
TAGGATTTGTATTGCTGTAT+GGG | - | chr7_4:41709974-41709993 | None:intergenic | 30.0% | |
! | TATGTGTTGAGGGTCTTTTA+GGG | + | chr7_4:41706361-41706380 | Msa1154260:five_prime_UTR | 35.0% |
CAATCATCCGTACACATTAT+TGG | + | chr7_4:41706412-41706431 | Msa1154260:five_prime_UTR | 35.0% | |
CAAACTGTAGCTTATAGCTA+TGG | - | chr7_4:41706454-41706473 | None:intergenic | 35.0% | |
! | AGAAGAAGAGAGTGAGTTTT+CGG | - | chr7_4:41706611-41706630 | None:intergenic | 35.0% |
AAATTTAGGAGTAGTGGTAG+TGG | - | chr7_4:41706644-41706663 | None:intergenic | 35.0% | |
GTTGCAAAATTTAGGAGTAG+TGG | - | chr7_4:41706650-41706669 | None:intergenic | 35.0% | |
TTTGCAACTCTTACACTACT+AGG | + | chr7_4:41706662-41706681 | Msa1154260:CDS | 35.0% | |
ACTAAATTTCCATCCAACAC+AGG | + | chr7_4:41706970-41706989 | Msa1154260:intron | 35.0% | |
! | GGTAGAATTACATGCTTTTG+AGG | + | chr7_4:41707022-41707041 | Msa1154260:intron | 35.0% |
!!! | TGCTTTTGAGGTAGCTTTTA+TGG | + | chr7_4:41707034-41707053 | Msa1154260:intron | 35.0% |
!!! | GCTTTTGAGGTAGCTTTTAT+GGG | + | chr7_4:41707035-41707054 | Msa1154260:intron | 35.0% |
AGATTAAGATGCTTTGGTTG+TGG | + | chr7_4:41707149-41707168 | Msa1154260:intron | 35.0% | |
CTGATCAACTCAAGACTATT+CGG | + | chr7_4:41707562-41707581 | Msa1154260:intron | 35.0% | |
! | GGTATTCTTCTGTCATTTCT+AGG | - | chr7_4:41707878-41707897 | None:intergenic | 35.0% |
AGAAATGACAGAAGAATACC+GGG | + | chr7_4:41707878-41707897 | Msa1154260:CDS | 35.0% | |
AAATATCTGTTCTTGAGACG+AGG | - | chr7_4:41707911-41707930 | None:intergenic | 35.0% | |
ATTTAGAGGTAACATCTCAC+AGG | - | chr7_4:41707988-41708007 | None:intergenic | 35.0% | |
GTTACCTCTAAATATAGTGG+AGG | + | chr7_4:41707995-41708014 | Msa1154260:CDS | 35.0% | |
ATCTCCTCCACTATATTTAG+AGG | - | chr7_4:41708002-41708021 | None:intergenic | 35.0% | |
GAGGAGATAGAAATCACAAA+AGG | + | chr7_4:41708014-41708033 | Msa1154260:CDS | 35.0% | |
AGAAATCACAAAAGGATCTG+TGG | + | chr7_4:41708022-41708041 | Msa1154260:CDS | 35.0% | |
! | TGCAAAGAGCAATTAGTTTC+TGG | + | chr7_4:41708065-41708084 | Msa1154260:CDS | 35.0% |
TTATGCTCAAACATCACTGA+AGG | + | chr7_4:41708256-41708275 | Msa1154260:CDS | 35.0% | |
TATGCTCAAACATCACTGAA+GGG | + | chr7_4:41708257-41708276 | Msa1154260:CDS | 35.0% | |
!! | AAACATCACTGAAGGGTATT+GGG | + | chr7_4:41708264-41708283 | Msa1154260:CDS | 35.0% |
!! | GTATTGGGAAGTGTCAATTA+TGG | + | chr7_4:41708279-41708298 | Msa1154260:CDS | 35.0% |
! | TGGTCCTTTTCTATAGTAGT+TGG | - | chr7_4:41708329-41708348 | None:intergenic | 35.0% |
TAGTTTCTACAATTGTCCTC+TGG | - | chr7_4:41708349-41708368 | None:intergenic | 35.0% | |
ATTCCCTTGACTTTCTTGTT+TGG | + | chr7_4:41708407-41708426 | Msa1154260:CDS | 35.0% | |
ATGCCAAACAAGAAAGTCAA+GGG | - | chr7_4:41708413-41708432 | None:intergenic | 35.0% | |
CTTGTTTGGCATGTTAAAGA+TGG | + | chr7_4:41708421-41708440 | Msa1154260:CDS | 35.0% | |
TACTAGAGAATTTCTTGCTG+CGG | + | chr7_4:41708591-41708610 | Msa1154260:CDS | 35.0% | |
CATAGTTCTCTGCTAAAAGT+AGG | + | chr7_4:41708674-41708693 | Msa1154260:CDS | 35.0% | |
TGTAAACTTAAGCAAGGATC+AGG | - | chr7_4:41708734-41708753 | None:intergenic | 35.0% | |
GTGCCTAAATATTGGAATCA+GGG | - | chr7_4:41708877-41708896 | None:intergenic | 35.0% | |
AGTGCCTAAATATTGGAATC+AGG | - | chr7_4:41708878-41708897 | None:intergenic | 35.0% | |
CTTGTTCTGTTAATGCTGTA+TGG | - | chr7_4:41709025-41709044 | None:intergenic | 35.0% | |
CTATCACAGAGAATAAGTAG+CGG | + | chr7_4:41709212-41709231 | Msa1154260:CDS | 35.0% | |
GAGCAAATGTTCATGAAACA+AGG | + | chr7_4:41709350-41709369 | Msa1154260:CDS | 35.0% | |
TTTCTTTACCTCTCTTTCCA+AGG | + | chr7_4:41709403-41709422 | Msa1154260:CDS | 35.0% | |
TTCTTTACCTCTCTTTCCAA+GGG | + | chr7_4:41709404-41709423 | Msa1154260:CDS | 35.0% | |
!! | TAGACTTCCTACTTGCTTTT+TGG | - | chr7_4:41709475-41709494 | None:intergenic | 35.0% |
AAAAAGCAAGTAGGAAGTCT+AGG | + | chr7_4:41709474-41709493 | Msa1154260:CDS | 35.0% | |
AAAAGCAAGTAGGAAGTCTA+GGG | + | chr7_4:41709475-41709494 | Msa1154260:CDS | 35.0% | |
TAGGAGATATTCTCTCTCAT+AGG | + | chr7_4:41709523-41709542 | Msa1154260:CDS | 35.0% | |
CAAGTTCAATTGCGAAACTA+AGG | - | chr7_4:41709661-41709680 | None:intergenic | 35.0% | |
TGTTTAATGATGCTTCCTGT+TGG | - | chr7_4:41709763-41709782 | None:intergenic | 35.0% | |
ACATTACAAGATGTGGAGAA+TGG | + | chr7_4:41709785-41709804 | Msa1154260:three_prime_UTR | 35.0% | |
! | ATTTGTCAAACTTGCTCCTT+AGG | + | chr7_4:41709871-41709890 | Msa1154260:three_prime_UTR | 35.0% |
TATTGCTGTATGGGAAGTTA+AGG | - | chr7_4:41709965-41709984 | None:intergenic | 35.0% | |
CTAGGATTTGTATTGCTGTA+TGG | - | chr7_4:41709975-41709994 | None:intergenic | 35.0% | |
! | CTATGTGTTGAGGGTCTTTT+AGG | + | chr7_4:41706360-41706379 | Msa1154260:five_prime_UTR | 40.0% |
TAATGTGTACGGATGATTGC+AGG | - | chr7_4:41706411-41706430 | None:intergenic | 40.0% | |
! | TTCACTCTTTGTAACGGGAT+AGG | + | chr7_4:41706560-41706579 | Msa1154260:five_prime_UTR | 40.0% |
! | CTTGATTAGCTAGCTTCAAG+AGG | + | chr7_4:41706901-41706920 | Msa1154260:intron | 40.0% |
! | TTTTTCCCTGAGGTCTTTGT+AGG | + | chr7_4:41706993-41707012 | Msa1154260:intron | 40.0% |
CAAAACCTACAAAGACCTCA+GGG | - | chr7_4:41707001-41707020 | None:intergenic | 40.0% | |
TCAAAACCTACAAAGACCTC+AGG | - | chr7_4:41707002-41707021 | None:intergenic | 40.0% | |
! | TGAGGTCTTTGTAGGTTTTG+AGG | + | chr7_4:41707001-41707020 | Msa1154260:intron | 40.0% |
GTTGTGGTAGAAGGAATAAG+AGG | + | chr7_4:41707165-41707184 | Msa1154260:intron | 40.0% | |
GGAGTCATTTCTGCTACATA+AGG | + | chr7_4:41707315-41707334 | Msa1154260:CDS | 40.0% | |
GTTCATCATGTAGTTTCCCT+TGG | + | chr7_4:41707665-41707684 | Msa1154260:intron | 40.0% | |
! | AAGCTCCAAGTTTGAAACAC+TGG | - | chr7_4:41707742-41707761 | None:intergenic | 40.0% |
TCATCGCAAGTTCAAATGTC+TGG | - | chr7_4:41707785-41707804 | None:intergenic | 40.0% | |
CTTGCGATGAAGTTCTGTTA+TGG | + | chr7_4:41707795-41707814 | Msa1154260:CDS | 40.0% | |
TCAAAATCTTCAGAGGTCAG+TGG | + | chr7_4:41707950-41707969 | Msa1154260:CDS | 40.0% | |
! | ACACTGTGATGGTGAATCTA+AGG | + | chr7_4:41708100-41708119 | Msa1154260:CDS | 40.0% |
CAGAGAGTTATATGTGCCAT+GGG | + | chr7_4:41708188-41708207 | Msa1154260:CDS | 40.0% | |
TATATGTGCCATGGGAAGAA+TGG | + | chr7_4:41708196-41708215 | Msa1154260:CDS | 40.0% | |
ATATGTGCCATGGGAAGAAT+GGG | + | chr7_4:41708197-41708216 | Msa1154260:CDS | 40.0% | |
! | CAAACATCACTGAAGGGTAT+TGG | + | chr7_4:41708263-41708282 | Msa1154260:CDS | 40.0% |
CTACTATAGAAAAGGACCAG+AGG | + | chr7_4:41708330-41708349 | Msa1154260:CDS | 40.0% | |
! | ATGGAAGAGCTTTTGTCTGT+TGG | - | chr7_4:41708386-41708405 | None:intergenic | 40.0% |
CAAGAAAGTCAAGGGAATGA+TGG | - | chr7_4:41708405-41708424 | None:intergenic | 40.0% | |
CATGCCAAACAAGAAAGTCA+AGG | - | chr7_4:41708414-41708433 | None:intergenic | 40.0% | |
AACTGTATCCACGTCAAACA+AGG | - | chr7_4:41708564-41708583 | None:intergenic | 40.0% | |
ACTACGGATATGAATCCGAT+GGG | + | chr7_4:41708636-41708655 | Msa1154260:CDS | 40.0% | |
TCCATTAGAACCAATCCCAT+CGG | - | chr7_4:41708654-41708673 | None:intergenic | 40.0% | |
TCAATGACACGAGCATAATC+AGG | - | chr7_4:41708785-41708804 | None:intergenic | 40.0% | |
! | TATGCTCGTGTCATTGATGA+TGG | + | chr7_4:41708788-41708807 | Msa1154260:CDS | 40.0% |
AGCCGTCGACATTTATTTGA+AGG | + | chr7_4:41708820-41708839 | Msa1154260:CDS | 40.0% | |
GTGCATTGTCAACATGAAGT+AGG | - | chr7_4:41708982-41709001 | None:intergenic | 40.0% | |
AGCTGGAGATTTCAAGATTG+AGG | + | chr7_4:41709303-41709322 | Msa1154260:CDS | 40.0% | |
GCTGGAGATTTCAAGATTGA+GGG | + | chr7_4:41709304-41709323 | Msa1154260:CDS | 40.0% | |
AGATTTCAAGATTGAGGGTG+AGG | + | chr7_4:41709309-41709328 | Msa1154260:CDS | 40.0% | |
TCTTTACCTCTCTTTCCAAG+GGG | + | chr7_4:41709405-41709424 | Msa1154260:CDS | 40.0% | |
!! | GCAAATTTTAGCAGTCAAGG+TGG | + | chr7_4:41709440-41709459 | Msa1154260:CDS | 40.0% |
!! | AATTTTAGCAGTCAAGGTGG+AGG | + | chr7_4:41709443-41709462 | Msa1154260:CDS | 40.0% |
GAAATCGCCAAAAAGCAAGT+AGG | + | chr7_4:41709465-41709484 | Msa1154260:CDS | 40.0% | |
AAAGCAAGTAGGAAGTCTAG+GGG | + | chr7_4:41709476-41709495 | Msa1154260:CDS | 40.0% | |
ATTGTGATGGTCACCTGAAA+AGG | - | chr7_4:41709598-41709617 | None:intergenic | 40.0% | |
TGGAATCGTCTTAGATTGCA+GGG | - | chr7_4:41709705-41709724 | None:intergenic | 40.0% | |
!! | TTTTAAGGACGCCAACAGAA+AGG | - | chr7_4:41709840-41709859 | None:intergenic | 40.0% |
TTTCCTTTCCTAGCAACCTA+AGG | - | chr7_4:41709890-41709909 | None:intergenic | 40.0% | |
! | CTCTTTGTAACGGGATAGGA+AGG | + | chr7_4:41706564-41706583 | Msa1154260:five_prime_UTR | 45.0% |
AGGGAAAAACCTGTGTTGGA+TGG | - | chr7_4:41706982-41707001 | None:intergenic | 45.0% | |
GATGCTTTGGTTGTGGTAGA+AGG | + | chr7_4:41707156-41707175 | Msa1154260:intron | 45.0% | |
AGAAGGAATAAGAGGACGCA+TGG | + | chr7_4:41707173-41707192 | Msa1154260:intron | 45.0% | |
GAAGGAATAAGAGGACGCAT+GGG | + | chr7_4:41707174-41707193 | Msa1154260:intron | 45.0% | |
! | AGGATTTTCGCTGATGTTGC+TGG | + | chr7_4:41707268-41707287 | Msa1154260:intron | 45.0% |
TTTCCCTTGGTTACCCTAAG+TGG | + | chr7_4:41707678-41707697 | Msa1154260:CDS | 45.0% | |
TTCCCTTGGTTACCCTAAGT+GGG | + | chr7_4:41707679-41707698 | Msa1154260:CDS | 45.0% | |
TTCCCACTTAGGGTAACCAA+GGG | - | chr7_4:41707684-41707703 | None:intergenic | 45.0% | |
TTACCCTAAGTGGGAAGATC+CGG | + | chr7_4:41707688-41707707 | Msa1154260:CDS | 45.0% | |
ATGGTTGCTGAAGCCAACAA+GGG | + | chr7_4:41707714-41707733 | Msa1154260:CDS | 45.0% | |
TGAAACACTGGAACCCTTGT+TGG | - | chr7_4:41707730-41707749 | None:intergenic | 45.0% | |
GGGTTCCAGTGTTTCAAACT+TGG | + | chr7_4:41707734-41707753 | Msa1154260:CDS | 45.0% | |
! | TTGGAGCTTCCCAATTTTCC+AGG | + | chr7_4:41707753-41707772 | Msa1154260:CDS | 45.0% |
TGGTGTCCTCCTGGAAAATT+GGG | - | chr7_4:41707765-41707784 | None:intergenic | 45.0% | |
!! | TTGAGACGAGGTTTTGATCC+CGG | - | chr7_4:41707899-41707918 | None:intergenic | 45.0% |
GGAAATAAAGGATGAGTGCG+TGG | + | chr7_4:41708121-41708140 | Msa1154260:CDS | 45.0% | |
CCATGGCACATATAACTCTC+TGG | - | chr7_4:41708190-41708209 | None:intergenic | 45.0% | |
CCAGAGAGTTATATGTGCCA+TGG | + | chr7_4:41708187-41708206 | Msa1154260:CDS | 45.0% | |
TATGTGCCATGGGAAGAATG+GGG | + | chr7_4:41708198-41708217 | Msa1154260:CDS | 45.0% | |
! | AGCTTTTGTCTGTTGGCATG+AGG | - | chr7_4:41708379-41708398 | None:intergenic | 45.0% |
AAGCTCAAGCCTACATGGAA+TGG | - | chr7_4:41708465-41708484 | None:intergenic | 45.0% | |
CTTTCAAGCTCAAGCCTACA+TGG | - | chr7_4:41708470-41708489 | None:intergenic | 45.0% | |
GTAGGCTTGAGCTTGAAAGA+AGG | + | chr7_4:41708471-41708490 | Msa1154260:CDS | 45.0% | |
CTTATACCATCTCTGCAGAG+TGG | + | chr7_4:41708533-41708552 | Msa1154260:CDS | 45.0% | |
TTGACGTGGATACAGTTCAC+AGG | + | chr7_4:41708567-41708586 | Msa1154260:CDS | 45.0% | |
! | TTTCTTGCTGCGGATTGAAG+AGG | + | chr7_4:41708601-41708620 | Msa1154260:CDS | 45.0% |
GACTACGGATATGAATCCGA+TGG | + | chr7_4:41708635-41708654 | Msa1154260:CDS | 45.0% | |
GGATATGAATCCGATGGGAT+TGG | + | chr7_4:41708641-41708660 | Msa1154260:CDS | 45.0% | |
!! | TCCGATGGGATTGGTTCTAA+TGG | + | chr7_4:41708650-41708669 | Msa1154260:CDS | 45.0% |
AGCGCAACTGCTCAAAATAC+AGG | - | chr7_4:41709154-41709173 | None:intergenic | 45.0% | |
AGAGAATCGAGAACTGAAGC+TGG | + | chr7_4:41709286-41709305 | Msa1154260:CDS | 45.0% | |
TGCAATTCTTCCTATCCCCT+TGG | - | chr7_4:41709423-41709442 | None:intergenic | 45.0% | |
ATTGCAGGGACTATGAAGAG+TGG | - | chr7_4:41709691-41709710 | None:intergenic | 45.0% | |
CTGGAATCGTCTTAGATTGC+AGG | - | chr7_4:41709706-41709725 | None:intergenic | 45.0% | |
ACACCTCCATTCCTTTCTGT+TGG | + | chr7_4:41709826-41709845 | Msa1154260:three_prime_UTR | 45.0% | |
! | AACTTGCTCCTTAGGTTGCT+AGG | + | chr7_4:41709879-41709898 | Msa1154260:three_prime_UTR | 45.0% |
GTACGGATGATTGCAGGTTC+AGG | - | chr7_4:41706405-41706424 | None:intergenic | 50.0% | |
CCTCAGGGAAAAACCTGTGT+TGG | - | chr7_4:41706986-41707005 | None:intergenic | 50.0% | |
! | CCAACACAGGTTTTTCCCTG+AGG | + | chr7_4:41706983-41707002 | Msa1154260:intron | 50.0% |
CTTCCCACTTAGGGTAACCA+AGG | - | chr7_4:41707685-41707704 | None:intergenic | 50.0% | |
CTTCCGGATCTTCCCACTTA+GGG | - | chr7_4:41707694-41707713 | None:intergenic | 50.0% | |
TCTTCCGGATCTTCCCACTT+AGG | - | chr7_4:41707695-41707714 | None:intergenic | 50.0% | |
AAGTGGGAAGATCCGGAAGA+TGG | + | chr7_4:41707695-41707714 | Msa1154260:CDS | 50.0% | |
TGGCTTCAGCAACCATCTTC+CGG | - | chr7_4:41707710-41707729 | None:intergenic | 50.0% | |
GATGGTTGCTGAAGCCAACA+AGG | + | chr7_4:41707713-41707732 | Msa1154260:CDS | 50.0% | |
! | GAGCTTCCCAATTTTCCAGG+AGG | + | chr7_4:41707756-41707775 | Msa1154260:CDS | 50.0% |
CTGGTGTCCTCCTGGAAAAT+TGG | - | chr7_4:41707766-41707785 | None:intergenic | 50.0% | |
TCAAATGTCTGGTGTCCTCC+TGG | - | chr7_4:41707774-41707793 | None:intergenic | 50.0% | |
ACTCAGCTGCACAACGTAGT+CGG | - | chr7_4:41707854-41707873 | None:intergenic | 50.0% | |
TAAAGGATGAGTGCGTGGCA+TGG | + | chr7_4:41708126-41708145 | Msa1154260:CDS | 50.0% | |
ATGTGCCATGGGAAGAATGG+GGG | + | chr7_4:41708199-41708218 | Msa1154260:CDS | 50.0% | |
TCTAACCCCCATTCTTCCCA+TGG | - | chr7_4:41708207-41708226 | None:intergenic | 50.0% | |
! | TAGGTGCCACCATTCCATGT+AGG | + | chr7_4:41708453-41708472 | Msa1154260:CDS | 50.0% |
CTCAAGCCTACATGGAATGG+TGG | - | chr7_4:41708462-41708481 | None:intergenic | 50.0% | |
! | TGGAGACTCCTTGTTTGACG+TGG | + | chr7_4:41708553-41708572 | Msa1154260:CDS | 50.0% |
! | GCGGATTGAAGAGGAAGAAG+CGG | + | chr7_4:41708610-41708629 | Msa1154260:CDS | 50.0% |
GAGGAAGAAGCGGAAGACTA+CGG | + | chr7_4:41708620-41708639 | Msa1154260:CDS | 50.0% | |
ACCATGCTGCACAGAATGAC+AGG | + | chr7_4:41709102-41709121 | Msa1154260:CDS | 50.0% | |
ACTTGTACCACCATCTGCAG+TGG | - | chr7_4:41709131-41709150 | None:intergenic | 50.0% | |
GCGCTTGAAAAATGCCGTGT+CGG | + | chr7_4:41709169-41709188 | Msa1154260:CDS | 50.0% | |
CGCTTGAAAAATGCCGTGTC+GGG | + | chr7_4:41709170-41709189 | Msa1154260:CDS | 50.0% | |
GCTTGAAAAATGCCGTGTCG+GGG | + | chr7_4:41709171-41709190 | Msa1154260:CDS | 50.0% | |
GTAGTTGTCCCTAGGAGACA+TGG | - | chr7_4:41709252-41709271 | None:intergenic | 50.0% | |
AGTGATGCGTAGTTGTCCCT+AGG | - | chr7_4:41709260-41709279 | None:intergenic | 50.0% | |
ACCTCTCTTTCCAAGGGGAT+AGG | + | chr7_4:41709410-41709429 | Msa1154260:CDS | 50.0% | |
TCCTATCCCCTTGGAAAGAG+AGG | - | chr7_4:41709414-41709433 | None:intergenic | 50.0% | |
TAGGAAGTCTAGGGGAACAG+AGG | + | chr7_4:41709484-41709503 | Msa1154260:CDS | 50.0% | |
AGGAAGTCTAGGGGAACAGA+GGG | + | chr7_4:41709485-41709504 | Msa1154260:CDS | 50.0% | |
AGGGGAACAGAGGGGAAAAA+TGG | + | chr7_4:41709494-41709513 | Msa1154260:CDS | 50.0% | |
GAACAGAGGGGAAAAATGGC+AGG | + | chr7_4:41709498-41709517 | Msa1154260:CDS | 50.0% | |
AGGGGAAAAATGGCAGGAGT+AGG | + | chr7_4:41709504-41709523 | Msa1154260:CDS | 50.0% | |
! | AGAGACACTGCTTGTTGCAG+TGG | + | chr7_4:41709734-41709753 | Msa1154260:three_prime_UTR | 50.0% |
TTGTTGCAGTGGCTACCAAC+AGG | + | chr7_4:41709745-41709764 | Msa1154260:three_prime_UTR | 50.0% | |
ACGCCAACAGAAAGGAATGG+AGG | - | chr7_4:41709832-41709851 | None:intergenic | 50.0% | |
AGGACGCCAACAGAAAGGAA+TGG | - | chr7_4:41709835-41709854 | None:intergenic | 50.0% | |
! | GCTCCTTAGGTTGCTAGGAA+AGG | + | chr7_4:41709884-41709903 | Msa1154260:three_prime_UTR | 50.0% |
GCAGACACACCTCAGACACA+AGG | + | chr7_4:41706507-41706526 | Msa1154260:five_prime_UTR | 55.0% | |
GACACACCTCAGACACAAGG+AGG | + | chr7_4:41706510-41706529 | Msa1154260:five_prime_UTR | 55.0% | |
GCTCTTCCTCCTTGTGTCTG+AGG | - | chr7_4:41706519-41706538 | None:intergenic | 55.0% | |
CTCAGCTGCACAACGTAGTC+GGG | - | chr7_4:41707853-41707872 | None:intergenic | 55.0% | |
GAGTCTCCACTCTGCAGAGA+TGG | - | chr7_4:41708542-41708561 | None:intergenic | 55.0% | |
GCACCTCTTTCCCTCTGTTC+AGG | + | chr7_4:41708998-41709017 | Msa1154260:intron | 55.0% | |
GCTGTATGGGCCTGAACAGA+GGG | - | chr7_4:41709011-41709030 | None:intergenic | 55.0% | |
TGCTGTATGGGCCTGAACAG+AGG | - | chr7_4:41709012-41709031 | None:intergenic | 55.0% | |
GCCTGTCATTCTGTGCAGCA+TGG | - | chr7_4:41709106-41709125 | None:intergenic | 55.0% | |
TGACAGGCTTCCACTGCAGA+TGG | + | chr7_4:41709118-41709137 | Msa1154260:CDS | 55.0% | |
ATCTCCTGAACTCCCCGACA+CGG | - | chr7_4:41709186-41709205 | None:intergenic | 55.0% | |
TGTCGGGGAGTTCAGGAGAT+GGG | + | chr7_4:41709186-41709205 | Msa1154260:CDS | 55.0% | |
CTAGGAGACATGGCTGCACT+CGG | - | chr7_4:41709242-41709261 | None:intergenic | 55.0% | |
GAGTGCAGCCATGTCTCCTA+GGG | + | chr7_4:41709241-41709260 | Msa1154260:CDS | 55.0% | |
GGGACAACTACGCATCACTG+CGG | + | chr7_4:41709261-41709280 | Msa1154260:CDS | 55.0% | |
! | GAGGCTGAGTGAGTTGGAGA+AGG | + | chr7_4:41709328-41709347 | Msa1154260:CDS | 55.0% |
GGAAGTCTAGGGGAACAGAG+GGG | + | chr7_4:41709486-41709505 | Msa1154260:CDS | 55.0% | |
GCAGTGTCTCTGTGTGCATC+TGG | - | chr7_4:41709725-41709744 | None:intergenic | 55.0% | |
! | GGTGTTATGCCTCTGCGACT+AGG | - | chr7_4:41709811-41709830 | None:intergenic | 55.0% |
AGGATGAGTGCGTGGCATGG+TGG | + | chr7_4:41708129-41708148 | Msa1154260:CDS | 60.0% | |
GGGCCTGAACAGAGGGAAAG+AGG | - | chr7_4:41709004-41709023 | None:intergenic | 60.0% | |
CAGGCTTCCACTGCAGATGG+TGG | + | chr7_4:41709121-41709140 | Msa1154260:CDS | 60.0% | |
AATGCCGTGTCGGGGAGTTC+AGG | + | chr7_4:41709179-41709198 | Msa1154260:CDS | 60.0% | |
GTGTCGGGGAGTTCAGGAGA+TGG | + | chr7_4:41709185-41709204 | Msa1154260:CDS | 60.0% | |
CGAGTGCAGCCATGTCTCCT+AGG | + | chr7_4:41709240-41709259 | Msa1154260:CDS | 60.0% | |
GAGGGTGAGGCTGAGTGAGT+TGG | + | chr7_4:41709322-41709341 | Msa1154260:CDS | 60.0% | |
GGAGAATGGCCTAGTCGCAG+AGG | + | chr7_4:41709799-41709818 | Msa1154260:three_prime_UTR | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 41706292 | 41710005 | 41706292 | ID=Msa1154260;Name=Msa1154260 |
chr7_4 | mRNA | 41706292 | 41710005 | 41706292 | ID=Msa1154260-mRNA-1;Parent=Msa1154260;Name=Msa1154260-mRNA-1;_AED=0.01;_eAED=0.01;_QI=309|1|1|1|1|1|4|461|612 |
chr7_4 | exon | 41706292 | 41706683 | 41706292 | ID=Msa1154260-mRNA-1:exon:10145;Parent=Msa1154260-mRNA-1 |
chr7_4 | exon | 41707270 | 41707336 | 41707270 | ID=Msa1154260-mRNA-1:exon:10146;Parent=Msa1154260-mRNA-1 |
chr7_4 | exon | 41707678 | 41708841 | 41707678 | ID=Msa1154260-mRNA-1:exon:10147;Parent=Msa1154260-mRNA-1 |
chr7_4 | exon | 41709020 | 41710005 | 41709020 | ID=Msa1154260-mRNA-1:exon:10148;Parent=Msa1154260-mRNA-1 |
chr7_4 | five_prime_UTR | 41706292 | 41706600 | 41706292 | ID=Msa1154260-mRNA-1:five_prime_utr;Parent=Msa1154260-mRNA-1 |
chr7_4 | CDS | 41706601 | 41706683 | 41706601 | ID=Msa1154260-mRNA-1:cds;Parent=Msa1154260-mRNA-1 |
chr7_4 | CDS | 41707270 | 41707336 | 41707270 | ID=Msa1154260-mRNA-1:cds;Parent=Msa1154260-mRNA-1 |
chr7_4 | CDS | 41707678 | 41708841 | 41707678 | ID=Msa1154260-mRNA-1:cds;Parent=Msa1154260-mRNA-1 |
chr7_4 | CDS | 41709020 | 41709544 | 41709020 | ID=Msa1154260-mRNA-1:cds;Parent=Msa1154260-mRNA-1 |
chr7_4 | three_prime_UTR | 41709545 | 41710005 | 41709545 | ID=Msa1154260-mRNA-1:three_prime_utr;Parent=Msa1154260-mRNA-1 |
Gene Sequence |
Protein sequence |