Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358290 | XP_003611079.1 | 98.955 | 287 | 3 | 0 | 1 | 287 | 1 | 287 | 0.0 | 580 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358290 | sp|Q7XSQ9|PIP12_ORYSJ | 87.762 | 286 | 33 | 2 | 3 | 287 | 4 | 288 | 0.0 | 514 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358290 | G7KC21 | 98.955 | 287 | 3 | 0 | 1 | 287 | 1 | 287 | 0.0 | 580 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014770 | Msa1358290 | 0.842375 | 2.687132e-58 | -8.615850e-47 |
| Msa0025160 | Msa1358290 | 0.861259 | 1.163046e-63 | -8.615850e-47 |
| Msa0032460 | Msa1358290 | 0.868541 | 6.047940e-66 | -8.615850e-47 |
| Msa0033220 | Msa1358290 | 0.809503 | 1.832155e-50 | -8.615850e-47 |
| Msa0035270 | Msa1358290 | 0.814554 | 1.452485e-51 | -8.615850e-47 |
| Msa0035340 | Msa1358290 | 0.829678 | 4.500426e-55 | -8.615850e-47 |
| Msa0035380 | Msa1358290 | 0.817171 | 3.786060e-52 | -8.615850e-47 |
| Msa0054390 | Msa1358290 | 0.817148 | 3.831703e-52 | -8.615850e-47 |
| Msa0054690 | Msa1358290 | 0.808520 | 2.975156e-50 | -8.615850e-47 |
| Msa0072520 | Msa1358290 | 0.842742 | 2.147406e-58 | -8.615850e-47 |
| Msa0077340 | Msa1358290 | 0.831702 | 1.437041e-55 | -8.615850e-47 |
| Msa0080030 | Msa1358290 | 0.802164 | 6.389786e-49 | -8.615850e-47 |
| Msa0080610 | Msa1358290 | 0.806160 | 9.411914e-50 | -8.615850e-47 |
| Msa0080820 | Msa1358290 | 0.801789 | 7.627973e-49 | -8.615850e-47 |
| Msa0102110 | Msa1358290 | 0.815890 | 7.331124e-52 | -8.615850e-47 |
| Msa0108630 | Msa1358290 | 0.815918 | 7.225565e-52 | -8.615850e-47 |
| Msa0108880 | Msa1358290 | 0.823263 | 1.521784e-53 | -8.615850e-47 |
| Msa1349690 | Msa1358290 | 0.988002 | 2.421812e-172 | -8.615850e-47 |
| Msa1357070 | Msa1358290 | 0.803950 | 2.728825e-49 | -8.615850e-47 |
| Msa1358290 | Msa1359690 | 0.805537 | 1.272509e-49 | -8.615850e-47 |
| Msa1358290 | Msa1363010 | 0.819622 | 1.054485e-52 | -8.615850e-47 |
| Msa1358290 | Msa1374790 | 0.808763 | 2.640033e-50 | -8.615850e-47 |
| Msa1358290 | Msa1375350 | 0.847092 | 1.438844e-59 | -8.615850e-47 |
| Msa1358290 | Msa1381030 | 0.804308 | 2.298700e-49 | -8.615850e-47 |
| Msa1358290 | Msa1383310 | 0.842484 | 2.514318e-58 | -8.615850e-47 |
| Msa1358290 | Msa1387500 | 0.800422 | 1.452259e-48 | -8.615850e-47 |
| Msa1358290 | Msa1392740 | 0.987815 | 1.223655e-171 | -8.615850e-47 |
| Msa1358290 | Msa1393780 | 0.804739 | 1.869504e-49 | -8.615850e-47 |
| Msa1358290 | Msa1405460 | 0.837471 | 5.097239e-57 | -8.615850e-47 |
| Msa1358290 | Msa1407840 | 0.842292 | 2.826700e-58 | -8.615850e-47 |
| Msa1358290 | Msa1409410 | 0.826390 | 2.784595e-54 | -8.615850e-47 |
| Msa1358290 | Msa1410160 | 0.805884 | 1.075964e-49 | -8.615850e-47 |
| Msa1358290 | Msa1414170 | 0.820538 | 6.507265e-53 | -8.615850e-47 |
| Msa1358290 | Msa1426320 | 0.802791 | 4.744481e-49 | -8.615850e-47 |
| Msa1358290 | Msa1437810 | 0.845239 | 4.596777e-59 | -8.615850e-47 |
| Msa1358290 | Msa1440430 | 0.804398 | 2.202144e-49 | -8.615850e-47 |
| Msa1358290 | Msa1451820 | 0.807361 | 5.248531e-50 | -8.615850e-47 |
| Msa1358290 | Msa1454500 | 0.829641 | 4.593773e-55 | -8.615850e-47 |
| Msa1358290 | Msa1462490 | 0.800530 | 1.380201e-48 | -8.615850e-47 |
| Msa0610690 | Msa1358290 | 0.815934 | 7.166960e-52 | -8.615850e-47 |
| Msa0619710 | Msa1358290 | 0.834432 | 3.008092e-56 | -8.615850e-47 |
| Msa0625340 | Msa1358290 | 0.826009 | 3.432175e-54 | -8.615850e-47 |
| Msa0625620 | Msa1358290 | 0.800967 | 1.123881e-48 | -8.615850e-47 |
| Msa0661150 | Msa1358290 | 0.808318 | 3.285507e-50 | -8.615850e-47 |
| Msa0666700 | Msa1358290 | 0.802724 | 4.896978e-49 | -8.615850e-47 |
| Msa0687090 | Msa1358290 | 0.807911 | 4.009974e-50 | -8.615850e-47 |
| Msa0689660 | Msa1358290 | 0.800619 | 1.323747e-48 | -8.615850e-47 |
| Msa0700460 | Msa1358290 | 0.809090 | 2.246509e-50 | -8.615850e-47 |
| Msa0706150 | Msa1358290 | 0.829356 | 5.388395e-55 | -8.615850e-47 |
| Msa0716480 | Msa1358290 | 0.855423 | 6.374360e-62 | -8.615850e-47 |
| Msa0740710 | Msa1358290 | 0.844634 | 6.693579e-59 | -8.615850e-47 |
| Msa0747000 | Msa1358290 | 0.804509 | 2.087533e-49 | -8.615850e-47 |
| Msa0752780 | Msa1358290 | 0.958777 | 1.015033e-116 | -8.615850e-47 |
| Msa0761310 | Msa1358290 | 0.806227 | 9.111756e-50 | -8.615850e-47 |
| Msa0780910 | Msa1358290 | 0.850084 | 2.134363e-60 | -8.615850e-47 |
| Msa0811690 | Msa1358290 | 0.828467 | 8.846327e-55 | -8.615850e-47 |
| Msa0821160 | Msa1358290 | 0.839902 | 1.200280e-57 | -8.615850e-47 |
| Msa0829300 | Msa1358290 | 0.825757 | 3.939277e-54 | -8.615850e-47 |
| Msa0829330 | Msa1358290 | 0.820045 | 8.439471e-53 | -8.615850e-47 |
| Msa0837460 | Msa1358290 | 0.858973 | 5.701324e-63 | -8.615850e-47 |
| Msa0120790 | Msa1358290 | 0.822003 | 2.988335e-53 | -8.615850e-47 |
| Msa0123070 | Msa1358290 | 0.802317 | 5.941702e-49 | -8.615850e-47 |
| Msa0125360 | Msa1358290 | 0.817655 | 2.946072e-52 | -8.615850e-47 |
| Msa0146820 | Msa1358290 | 0.802458 | 5.557220e-49 | -8.615850e-47 |
| Msa0154620 | Msa1358290 | 0.848595 | 5.543637e-60 | -8.615850e-47 |
| Msa0161930 | Msa1358290 | 0.806410 | 8.340149e-50 | -8.615850e-47 |
| Msa0173290 | Msa1358290 | 0.857544 | 1.518030e-62 | -8.615850e-47 |
| Msa0174290 | Msa1358290 | 0.802653 | 5.065288e-49 | -8.615850e-47 |
| Msa0176060 | Msa1358290 | 0.823368 | 1.438347e-53 | -8.615850e-47 |
| Msa0185960 | Msa1358290 | 0.867303 | 1.511890e-65 | -8.615850e-47 |
| Msa1262590 | Msa1358290 | 0.828740 | 7.600522e-55 | -8.615850e-47 |
| Msa1263780 | Msa1358290 | 0.804237 | 2.379024e-49 | -8.615850e-47 |
| Msa1303880 | Msa1358290 | 0.842856 | 2.002241e-58 | -8.615850e-47 |
| Msa1306570 | Msa1358290 | 0.840841 | 6.818284e-58 | -8.615850e-47 |
| Msa0381730 | Msa1358290 | 0.828358 | 9.397988e-55 | -8.615850e-47 |
| Msa0405680 | Msa1358290 | 0.802044 | 6.760745e-49 | -8.615850e-47 |
| Msa0422050 | Msa1358290 | 0.848882 | 4.618227e-60 | -8.615850e-47 |
| Msa0431200 | Msa1358290 | 0.840060 | 1.091201e-57 | -8.615850e-47 |
| Msa0432010 | Msa1358290 | 0.803258 | 3.797760e-49 | -8.615850e-47 |
| Msa0457570 | Msa1358290 | 0.805668 | 1.194584e-49 | -8.615850e-47 |
| Msa0468700 | Msa1358290 | 0.849429 | 3.252694e-60 | -8.615850e-47 |
| Msa0476280 | Msa1358290 | 0.811380 | 7.207828e-51 | -8.615850e-47 |
| Msa0994720 | Msa1358290 | 0.824726 | 6.902736e-54 | -8.615850e-47 |
| Msa1002640 | Msa1358290 | 0.828640 | 8.034386e-55 | -8.615850e-47 |
| Msa1025560 | Msa1358290 | 0.838475 | 2.812513e-57 | -8.615850e-47 |
| Msa1033430 | Msa1358290 | 0.810278 | 1.248054e-50 | -8.615850e-47 |
| Msa1034600 | Msa1358290 | 0.837806 | 4.182670e-57 | -8.615850e-47 |
| Msa1040150 | Msa1358290 | 0.845083 | 5.066019e-59 | -8.615850e-47 |
| Msa1042160 | Msa1358290 | 0.822203 | 2.685957e-53 | -8.615850e-47 |
| Msa1042190 | Msa1358290 | 0.824281 | 8.789982e-54 | -8.615850e-47 |
| Msa1044680 | Msa1358290 | 0.806168 | 9.376531e-50 | -8.615850e-47 |
| Msa1064370 | Msa1358290 | 0.838597 | 2.615637e-57 | -8.615850e-47 |
| Msa1073050 | Msa1358290 | 0.823511 | 1.331797e-53 | -8.615850e-47 |
| Msa1074370 | Msa1358290 | 0.801074 | 1.069104e-48 | -8.615850e-47 |
| Msa1077990 | Msa1358290 | 0.834730 | 2.531405e-56 | -8.615850e-47 |
| Msa1078820 | Msa1358290 | 0.820019 | 8.557915e-53 | -8.615850e-47 |
| Msa1105640 | Msa1358290 | 0.830384 | 3.027289e-55 | -8.615850e-47 |
| Msa0275080 | Msa1358290 | 0.804386 | 2.214371e-49 | -8.615850e-47 |
| Msa0286580 | Msa1358290 | 0.815721 | 7.994706e-52 | -8.615850e-47 |
| Msa0315980 | Msa1358290 | 0.812825 | 3.489339e-51 | -8.615850e-47 |
| Msa0325350 | Msa1358290 | 0.830199 | 3.359856e-55 | -8.615850e-47 |
| Msa0342840 | Msa1358290 | 0.802338 | 5.881740e-49 | -8.615850e-47 |
| Msa0346740 | Msa1358290 | 0.879189 | 1.526491e-69 | -8.615850e-47 |
| Msa0355080 | Msa1358290 | -0.801077 | 1.067204e-48 | -8.615850e-47 |
| Msa1114690 | Msa1358290 | 0.817043 | 4.046188e-52 | -8.615850e-47 |
| Msa1123970 | Msa1358290 | 0.818866 | 1.567237e-52 | -8.615850e-47 |
| Msa1128130 | Msa1358290 | 0.810736 | 9.936278e-51 | -8.615850e-47 |
| Msa1154260 | Msa1358290 | 0.803954 | 2.724327e-49 | -8.615850e-47 |
| Msa1154550 | Msa1358290 | 0.812819 | 3.499396e-51 | -8.615850e-47 |
| Msa1167470 | Msa1358290 | 0.827875 | 1.228281e-54 | -8.615850e-47 |
| Msa1169650 | Msa1358290 | 0.815604 | 8.488682e-52 | -8.615850e-47 |
| Msa1205110 | Msa1358290 | 0.827175 | 1.808659e-54 | -8.615850e-47 |
| Msa1216090 | Msa1358290 | 0.840641 | 7.695366e-58 | -8.615850e-47 |
| Msa1216110 | Msa1358290 | 0.832054 | 1.176361e-55 | -8.615850e-47 |
| Msa1216340 | Msa1358290 | 0.856544 | 2.994451e-62 | -8.615850e-47 |
| Msa1219930 | Msa1358290 | 0.852560 | 4.259932e-61 | -8.615850e-47 |
| Msa0500650 | Msa1358290 | 0.813925 | 2.000129e-51 | -8.615850e-47 |
| Msa0514580 | Msa1358290 | 0.834232 | 3.376121e-56 | -8.615850e-47 |
| Msa0517250 | Msa1358290 | 0.820071 | 8.322646e-53 | -8.615850e-47 |
| Msa0520260 | Msa1358290 | 0.849445 | 3.218179e-60 | -8.615850e-47 |
| Msa0521510 | Msa1358290 | 0.804354 | 2.249371e-49 | -8.615850e-47 |
| Msa0529030 | Msa1358290 | 0.840258 | 9.692830e-58 | -8.615850e-47 |
| Msa0530780 | Msa1358290 | 0.802091 | 6.612727e-49 | -8.615850e-47 |
| Msa0531960 | Msa1358290 | 0.807252 | 5.533858e-50 | -8.615850e-47 |
| Msa0563940 | Msa1358290 | 0.809484 | 1.849905e-50 | -8.615850e-47 |
| Msa0570010 | Msa1358290 | 0.823230 | 1.548985e-53 | -8.615850e-47 |
| Msa0574050 | Msa1358290 | 0.805865 | 1.086062e-49 | -8.615850e-47 |
| Msa0579160 | Msa1358290 | 0.825767 | 3.917653e-54 | -8.615850e-47 |
| Msa0579220 | Msa1358290 | 0.825205 | 5.321865e-54 | -8.615850e-47 |
| Msa0591170 | Msa1358290 | 0.827684 | 1.365308e-54 | -8.615850e-47 |
| Msa0851850 | Msa1358290 | 0.813529 | 2.443799e-51 | -8.615850e-47 |
| Msa0865420 | Msa1358290 | 0.800454 | 1.430739e-48 | -8.615850e-47 |
| Msa0894790 | Msa1358290 | 0.833757 | 4.438200e-56 | -8.615850e-47 |
| Msa0901120 | Msa1358290 | 0.815280 | 1.002133e-51 | -8.615850e-47 |
| Msa0909760 | Msa1358290 | 0.818133 | 2.297827e-52 | -8.615850e-47 |
| Msa0921590 | Msa1358290 | 0.843206 | 1.615572e-58 | -8.615850e-47 |
| Msa0940910 | Msa1358290 | 0.802983 | 4.329769e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358290 | MtrunA17_Chr5g0397391 | 98.955 | 287 | 3 | 0 | 1 | 287 | 1 | 287 | 0.0 | 580 |
| Msa1358290 | MtrunA17_Chr8g0386961 | 93.357 | 286 | 19 | 0 | 1 | 286 | 1 | 286 | 0.0 | 553 |
| Msa1358290 | MtrunA17_Chr4g0006001 | 84.375 | 288 | 41 | 2 | 2 | 286 | 3 | 289 | 3.35e-180 | 498 |
| Msa1358290 | MtrunA17_Chr5g0436701 | 84.615 | 286 | 42 | 1 | 3 | 286 | 4 | 289 | 7.71e-180 | 496 |
| Msa1358290 | MtrunA17_Chr3g0113211 | 84.321 | 287 | 43 | 1 | 3 | 287 | 4 | 290 | 5.57e-179 | 494 |
| Msa1358290 | MtrunA17_Chr7g0264111 | 74.144 | 263 | 61 | 2 | 29 | 285 | 16 | 277 | 1.87e-140 | 397 |
| Msa1358290 | MtrunA17_Chr2g0326621 | 68.519 | 270 | 77 | 2 | 23 | 285 | 11 | 279 | 8.04e-136 | 385 |
| Msa1358290 | MtrunA17_Chr1g0199731 | 70.943 | 265 | 70 | 2 | 27 | 285 | 14 | 277 | 4.02e-135 | 383 |
| Msa1358290 | MtrunA17_Chr4g0029071 | 68.539 | 267 | 77 | 2 | 25 | 285 | 12 | 277 | 1.89e-131 | 374 |
| Msa1358290 | MtrunA17_Chr3g0145671 | 68.679 | 265 | 82 | 1 | 21 | 285 | 6 | 269 | 5.87e-131 | 372 |
| Msa1358290 | MtrunA17_Chr1g0188771 | 36.207 | 232 | 129 | 6 | 52 | 278 | 21 | 238 | 5.94e-33 | 121 |
| Msa1358290 | MtrunA17_Chr2g0331261 | 36.325 | 234 | 134 | 5 | 47 | 277 | 15 | 236 | 1.39e-32 | 120 |
| Msa1358290 | MtrunA17_Chr6g0478191 | 39.419 | 241 | 128 | 8 | 52 | 287 | 21 | 248 | 1.94e-32 | 120 |
| Msa1358290 | MtrunA17_Chr8g0340161 | 36.325 | 234 | 132 | 6 | 46 | 274 | 11 | 232 | 8.41e-32 | 118 |
| Msa1358290 | MtrunA17_Chr1g0212671 | 34.836 | 244 | 139 | 7 | 41 | 278 | 10 | 239 | 5.23e-29 | 110 |
| Msa1358290 | MtrunA17_Chr7g0264961 | 33.745 | 243 | 137 | 7 | 42 | 277 | 11 | 236 | 5.42e-28 | 108 |
| Msa1358290 | MtrunA17_Chr7g0222791 | 34.426 | 244 | 140 | 7 | 41 | 278 | 10 | 239 | 5.49e-28 | 108 |
| Msa1358290 | MtrunA17_Chr4g0030861 | 32.773 | 238 | 145 | 5 | 41 | 275 | 10 | 235 | 9.95e-28 | 107 |
| Msa1358290 | MtrunA17_Chr1g0146161 | 33.766 | 231 | 126 | 7 | 52 | 275 | 19 | 229 | 2.30e-27 | 106 |
| Msa1358290 | MtrunA17_Chr5g0399341 | 37.168 | 226 | 126 | 6 | 52 | 274 | 19 | 231 | 1.33e-26 | 104 |
| Msa1358290 | MtrunA17_Chr1g0146171 | 33.476 | 233 | 124 | 8 | 52 | 275 | 19 | 229 | 4.25e-26 | 103 |
| Msa1358290 | MtrunA17_Chr5g0435051 | 29.688 | 192 | 122 | 4 | 84 | 275 | 68 | 246 | 2.74e-19 | 85.1 |
| Msa1358290 | MtrunA17_Chr2g0284591 | 32.627 | 236 | 136 | 7 | 55 | 287 | 39 | 254 | 4.62e-19 | 84.7 |
| Msa1358290 | MtrunA17_Chr8g0379901 | 28.870 | 239 | 146 | 7 | 43 | 277 | 30 | 248 | 9.22e-19 | 84.0 |
| Msa1358290 | MtrunA17_Chr5g0426131 | 27.632 | 228 | 150 | 5 | 47 | 274 | 32 | 244 | 1.20e-18 | 83.6 |
| Msa1358290 | MtrunA17_Chr3g0079421 | 31.250 | 192 | 119 | 4 | 84 | 275 | 54 | 232 | 3.91e-18 | 82.0 |
| Msa1358290 | MtrunA17_Chr2g0284611 | 31.120 | 241 | 143 | 7 | 50 | 287 | 36 | 256 | 6.00e-18 | 81.6 |
| Msa1358290 | MtrunA17_Chr2g0284631 | 29.075 | 227 | 145 | 6 | 41 | 267 | 80 | 290 | 9.89e-18 | 82.0 |
| Msa1358290 | MtrunA17_Chr4g0038591 | 28.205 | 195 | 118 | 7 | 99 | 279 | 95 | 281 | 3.32e-17 | 80.5 |
| Msa1358290 | MtrunA17_Chr8g0379911 | 27.615 | 239 | 156 | 6 | 49 | 287 | 35 | 256 | 3.77e-17 | 79.3 |
| Msa1358290 | MtrunA17_Chr4g0038611 | 29.688 | 192 | 119 | 6 | 99 | 279 | 32 | 218 | 5.85e-17 | 79.0 |
| Msa1358290 | MtrunA17_Chr4g0020781 | 31.282 | 195 | 120 | 4 | 84 | 278 | 15 | 195 | 5.92e-17 | 77.8 |
| Msa1358290 | MtrunA17_Chr2g0284581 | 30.043 | 233 | 146 | 6 | 55 | 287 | 41 | 256 | 9.53e-17 | 78.2 |
| Msa1358290 | MtrunA17_Chr4g0001221 | 28.302 | 212 | 135 | 6 | 56 | 267 | 79 | 273 | 4.91e-16 | 76.6 |
| Msa1358290 | MtrunA17_Chr2g0284601 | 30.653 | 199 | 124 | 4 | 89 | 287 | 24 | 208 | 5.79e-16 | 75.1 |
| Msa1358290 | MtrunA17_Chr7g0217331 | 27.966 | 236 | 150 | 7 | 50 | 284 | 35 | 251 | 6.12e-16 | 75.9 |
| Msa1358290 | MtrunA17_Chr4g0044201 | 25.221 | 226 | 136 | 6 | 55 | 277 | 38 | 233 | 1.68e-15 | 74.7 |
| Msa1358290 | MtrunA17_Chr2g0333771 | 30.516 | 213 | 129 | 7 | 56 | 267 | 84 | 278 | 1.77e-15 | 75.1 |
| Msa1358290 | MtrunA17_Chr1g0201331 | 28.319 | 226 | 142 | 8 | 56 | 279 | 78 | 285 | 6.33e-13 | 67.8 |
| Msa1358290 | MtrunA17_Chr1g0184541 | 24.820 | 278 | 184 | 7 | 2 | 272 | 6 | 265 | 2.80e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1358290 | AT4G00430.1 | 86.316 | 285 | 38 | 1 | 3 | 287 | 4 | 287 | 0.0 | 506 |
| Msa1358290 | AT2G45960.1 | 85.614 | 285 | 39 | 2 | 3 | 287 | 4 | 286 | 1.19e-180 | 499 |
| Msa1358290 | AT4G23400.1 | 86.972 | 284 | 36 | 1 | 3 | 286 | 4 | 286 | 1.99e-175 | 486 |
| Msa1358290 | AT1G01620.1 | 86.667 | 285 | 36 | 2 | 3 | 287 | 4 | 286 | 2.31e-174 | 483 |
| Msa1358290 | AT3G61430.2 | 85.263 | 285 | 40 | 2 | 3 | 287 | 4 | 286 | 4.66e-172 | 477 |
| Msa1358290 | AT3G61430.1 | 85.263 | 285 | 40 | 2 | 3 | 287 | 4 | 286 | 4.66e-172 | 477 |
| Msa1358290 | AT2G45960.2 | 85.433 | 254 | 35 | 2 | 3 | 256 | 4 | 255 | 2.44e-159 | 444 |
| Msa1358290 | AT2G45960.3 | 85.433 | 254 | 35 | 2 | 3 | 256 | 4 | 255 | 7.91e-158 | 442 |
| Msa1358290 | AT1G01620.2 | 89.302 | 215 | 22 | 1 | 73 | 287 | 1 | 214 | 1.20e-138 | 390 |
| Msa1358290 | AT2G37170.2 | 72.308 | 260 | 65 | 3 | 27 | 280 | 55 | 313 | 7.58e-135 | 385 |
| Msa1358290 | AT2G37170.1 | 72.308 | 260 | 65 | 3 | 27 | 280 | 12 | 270 | 1.96e-134 | 382 |
| Msa1358290 | AT3G53420.1 | 72.308 | 260 | 65 | 2 | 27 | 280 | 14 | 272 | 3.06e-134 | 382 |
| Msa1358290 | AT3G53420.2 | 72.308 | 260 | 65 | 2 | 27 | 280 | 14 | 272 | 3.06e-134 | 382 |
| Msa1358290 | AT4G35100.1 | 71.103 | 263 | 75 | 1 | 23 | 285 | 9 | 270 | 3.11e-134 | 381 |
| Msa1358290 | AT4G35100.2 | 71.103 | 263 | 75 | 1 | 23 | 285 | 9 | 270 | 3.11e-134 | 381 |
| Msa1358290 | AT3G54820.1 | 67.636 | 275 | 82 | 2 | 17 | 285 | 3 | 276 | 6.14e-134 | 380 |
| Msa1358290 | AT2G39010.1 | 68.000 | 275 | 81 | 2 | 17 | 285 | 3 | 276 | 3.68e-133 | 379 |
| Msa1358290 | AT2G16850.1 | 71.984 | 257 | 71 | 1 | 29 | 285 | 13 | 268 | 1.22e-132 | 377 |
| Msa1358290 | AT2G37180.1 | 71.154 | 260 | 68 | 3 | 27 | 280 | 12 | 270 | 2.37e-132 | 377 |
| Msa1358290 | AT5G60660.1 | 70.076 | 264 | 72 | 2 | 28 | 285 | 15 | 277 | 3.80e-132 | 376 |
| Msa1358290 | AT4G00430.2 | 82.547 | 212 | 36 | 1 | 3 | 214 | 4 | 214 | 6.05e-126 | 358 |
| Msa1358290 | AT2G39010.2 | 64.000 | 200 | 65 | 2 | 17 | 210 | 3 | 201 | 1.42e-84 | 253 |
| Msa1358290 | AT5G47450.1 | 37.872 | 235 | 131 | 6 | 43 | 274 | 10 | 232 | 6.62e-31 | 116 |
| Msa1358290 | AT1G73190.1 | 35.146 | 239 | 127 | 7 | 52 | 278 | 24 | 246 | 8.24e-31 | 116 |
| Msa1358290 | AT4G01470.1 | 34.711 | 242 | 139 | 6 | 41 | 277 | 10 | 237 | 1.64e-30 | 115 |
| Msa1358290 | AT3G16240.1 | 36.364 | 231 | 132 | 5 | 47 | 274 | 14 | 232 | 2.13e-30 | 115 |
| Msa1358290 | AT1G17810.1 | 36.170 | 235 | 130 | 5 | 52 | 278 | 24 | 246 | 6.61e-30 | 114 |
| Msa1358290 | AT2G36830.1 | 34.286 | 245 | 134 | 9 | 41 | 276 | 10 | 236 | 7.73e-28 | 108 |
| Msa1358290 | AT3G26520.1 | 33.188 | 229 | 138 | 5 | 52 | 277 | 22 | 238 | 1.75e-27 | 107 |
| Msa1358290 | AT4G17340.1 | 36.596 | 235 | 134 | 6 | 43 | 274 | 10 | 232 | 6.61e-27 | 105 |
| Msa1358290 | AT3G47440.1 | 33.190 | 232 | 135 | 6 | 52 | 278 | 23 | 239 | 3.05e-25 | 101 |
| Msa1358290 | AT2G25810.1 | 33.906 | 233 | 137 | 8 | 52 | 282 | 19 | 236 | 1.50e-24 | 99.4 |
| Msa1358290 | AT4G19030.1 | 29.286 | 280 | 172 | 9 | 3 | 277 | 13 | 271 | 2.42e-19 | 86.3 |
| Msa1358290 | AT1G31885.1 | 31.556 | 225 | 141 | 7 | 45 | 267 | 36 | 249 | 9.76e-19 | 85.1 |
| Msa1358290 | AT4G18910.1 | 28.512 | 242 | 162 | 6 | 38 | 277 | 36 | 268 | 7.53e-17 | 79.3 |
| Msa1358290 | AT5G37820.1 | 30.726 | 179 | 109 | 5 | 89 | 266 | 77 | 241 | 1.35e-16 | 78.6 |
| Msa1358290 | AT5G37820.2 | 29.891 | 184 | 114 | 5 | 84 | 266 | 108 | 277 | 1.63e-16 | 78.6 |
| Msa1358290 | AT2G34390.1 | 26.119 | 268 | 168 | 9 | 16 | 277 | 20 | 263 | 7.14e-16 | 76.6 |
| Msa1358290 | AT1G31885.2 | 31.892 | 185 | 116 | 5 | 85 | 267 | 19 | 195 | 8.58e-16 | 75.9 |
| Msa1358290 | AT2G34390.2 | 27.511 | 229 | 144 | 8 | 55 | 277 | 9 | 221 | 5.64e-14 | 70.5 |
| Msa1358290 | AT3G06100.1 | 29.707 | 239 | 140 | 8 | 52 | 286 | 46 | 260 | 1.65e-13 | 69.7 |
| Msa1358290 | AT3G06100.2 | 29.661 | 236 | 138 | 8 | 55 | 286 | 1 | 212 | 4.03e-13 | 67.8 |
| Msa1358290 | AT4G10380.1 | 26.316 | 266 | 160 | 9 | 20 | 267 | 29 | 276 | 4.62e-13 | 68.6 |
| Msa1358290 | AT1G80760.1 | 29.004 | 231 | 143 | 8 | 49 | 277 | 77 | 288 | 9.43e-13 | 67.8 |
| Msa1358290 | AT5G37810.1 | 24.742 | 194 | 133 | 4 | 84 | 277 | 72 | 252 | 2.53e-12 | 66.2 |
Find 84 sgRNAs with CRISPR-Local
Find 272 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGAATTGCTTGGGCTTT+TGG | 0.161774 | tig0016220:+496065 | Msa1358290:CDS |
| TATTGCACTGCTGGAATTTC+AGG | 0.165208 | tig0016220:+496110 | Msa1358290:CDS |
| TAATTTATATAGTGGGAATT+TGG | 0.202728 | tig0016220:-495694 | None:intergenic |
| TCATTGTTTATTTGCTTTGC+TGG | 0.234108 | tig0016220:-495656 | None:intergenic |
| TTGGCTACAATTCCCATTAC+TGG | 0.294571 | tig0016220:+497015 | Msa1358290:CDS |
| TTCTGGGTTGGACCTTTCAT+TGG | 0.308099 | tig0016220:+497218 | Msa1358290:CDS |
| GCCCTTGTCTATTGCACTGC+TGG | 0.332113 | tig0016220:+496101 | Msa1358290:CDS |
| GGAGAGGGAGGAAGATGTTA+AGG | 0.347098 | tig0016220:+495806 | Msa1358290:CDS |
| ACCAACAGAAGCACACTTAG+AGG | 0.357180 | tig0016220:-496039 | None:intergenic |
| AGTGGTTATAATTTATATAG+TGG | 0.373629 | tig0016220:-495702 | None:intergenic |
| TGTGCTTCTGTTGGTATTCA+AGG | 0.382436 | tig0016220:+496047 | Msa1358290:CDS |
| GATCCGAGCAATTCCTTTCA+AGG | 0.393867 | tig0016220:+497274 | Msa1358290:CDS |
| ACTCAGAAGTGATTAGTATT+GGG | 0.395145 | tig0016220:+495753 | Msa1358290:five_prime_UTR |
| TTGGTATTCAAGGAATTGCT+TGG | 0.400234 | tig0016220:+496057 | Msa1358290:CDS |
| ATACATATGAATATATGATT+TGG | 0.400235 | tig0016220:-497363 | None:intergenic |
| GCTCGTTATGAGTTGTATAA+AGG | 0.401946 | tig0016220:+496657 | Msa1358290:CDS |
| ACAATTCCCATTACTGGAAC+TGG | 0.407279 | tig0016220:+497021 | Msa1358290:CDS |
| GAATTGCTCGGATCACTATC+TGG | 0.408932 | tig0016220:-497265 | None:intergenic |
| ATGGTCTCTGTTGTATATTA+TGG | 0.412666 | tig0016220:-497073 | None:intergenic |
| AGAGTCTCTTGCATTTCTCT+TGG | 0.418783 | tig0016220:-496784 | None:intergenic |
| AGGGAGGAAGATGTTAAGGT+TGG | 0.422571 | tig0016220:+495810 | Msa1358290:CDS |
| AACTCAGAAGTGATTAGTAT+TGG | 0.426324 | tig0016220:+495752 | Msa1358290:five_prime_UTR |
| TGCAAGAGACTCTCACGTTC+CGG | 0.436085 | tig0016220:+496794 | Msa1358290:CDS |
| TGGTATTCAAGGAATTGCTT+GGG | 0.437803 | tig0016220:+496058 | Msa1358290:CDS |
| TACACCAAGGGTGATGGTCT+TGG | 0.441240 | tig0016220:+496705 | Msa1358290:CDS |
| CTTGGAGCTATCTGTGGTGC+TGG | 0.453990 | tig0016220:+496609 | Msa1358290:CDS |
| TTCTCAGAAAAGAATGCATT+GGG | 0.454430 | tig0016220:+495843 | Msa1358290:CDS |
| AATTACTCCCTTGCCTTGAA+AGG | 0.455988 | tig0016220:-497287 | None:intergenic |
| CCAGCACCTTTGTTTGAGCC+AGG | 0.466057 | tig0016220:+495909 | Msa1358290:CDS |
| TTAATGCCAGTTCCAGTAAT+GGG | 0.469401 | tig0016220:-497027 | None:intergenic |
| GCTTTGCTGGCTAATAATAA+CGG | 0.473041 | tig0016220:-495643 | None:intergenic |
| ATAAATCCAGCGGTGACATT+CGG | 0.475431 | tig0016220:+496525 | Msa1358290:CDS |
| CCCTCTAAGTGTGCTTCTGT+TGG | 0.477771 | tig0016220:+496038 | Msa1358290:CDS |
| TACATAATAATGCAGTGTCT+TGG | 0.479630 | tig0016220:+496591 | Msa1358290:CDS |
| GACCATGACTTCAACTCTCC+TGG | 0.486464 | tig0016220:-495927 | None:intergenic |
| AGCACACATGCCGATGATGA+TGG | 0.492805 | tig0016220:-497313 | None:intergenic |
| AACTCTCCTGGCTCAAACAA+AGG | 0.498554 | tig0016220:-495915 | None:intergenic |
| CATCACTGTCTTAACTGTGA+TGG | 0.500492 | tig0016220:+496001 | Msa1358290:CDS |
| GTGGTTATAATTTATATAGT+GGG | 0.500798 | tig0016220:-495701 | None:intergenic |
| GTTCTCAGAAAAGAATGCAT+TGG | 0.502108 | tig0016220:+495842 | Msa1358290:CDS |
| GGTCTTGGAGCTGAGATTGT+TGG | 0.502760 | tig0016220:+496720 | Msa1358290:CDS |
| CCTGGCTCAAACAAAGGTGC+TGG | 0.505994 | tig0016220:-495909 | None:intergenic |
| TGCATTTCTCTTGGCATCAG+TGG | 0.515764 | tig0016220:-496775 | None:intergenic |
| TAACTGTGATGGGTGTGAAT+AGG | 0.515829 | tig0016220:+496012 | Msa1358290:CDS |
| GAAAAGAATGCATTGGGCAC+AGG | 0.516964 | tig0016220:+495849 | Msa1358290:CDS |
| ATTAACCCAGCTAGGAGTCT+TGG | 0.521008 | tig0016220:+497045 | Msa1358290:CDS |
| TATACAACAGAGACCATGCT+TGG | 0.521813 | tig0016220:+497079 | Msa1358290:CDS |
| AGCTCCAAGACCATCACCCT+TGG | 0.522666 | tig0016220:-496709 | None:intergenic |
| AGCAATTCCTTTCAAGGCAA+GGG | 0.527223 | tig0016220:+497280 | Msa1358290:CDS |
| GAGTGATAGCAAGGACTACA+AGG | 0.528511 | tig0016220:+495878 | Msa1358290:CDS |
| GCAGCACCAAGACTCCTAGC+TGG | 0.528907 | tig0016220:-497051 | None:intergenic |
| CCATCACCCTTGGTGTAACC+AGG | 0.529590 | tig0016220:-496699 | None:intergenic |
| CAGTTAAGACAGTGATGTAA+AGG | 0.533154 | tig0016220:-495995 | None:intergenic |
| TTGCCTTGAAAGGAATTGCT+CGG | 0.539077 | tig0016220:-497277 | None:intergenic |
| AACAAACCGAATGTCACCGC+TGG | 0.543714 | tig0016220:-496531 | None:intergenic |
| ATCACTGTCTTAACTGTGAT+GGG | 0.546772 | tig0016220:+496002 | Msa1358290:CDS |
| CGTGAACTGAACACATTGAA+TGG | 0.548268 | tig0016220:+497425 | Msa1358290:three_prime_UTR |
| GCAAGTGCAGCTCCAATGAA+AGG | 0.549715 | tig0016220:-497230 | None:intergenic |
| AGTAATTAATCCATCATCAT+CGG | 0.554525 | tig0016220:+497303 | Msa1358290:exon |
| ATTGAAGTTTATAATATCAG+TGG | 0.559259 | tig0016220:-495720 | None:intergenic |
| GGAGCAAATGTTGTGAATCC+TGG | 0.560797 | tig0016220:+496681 | Msa1358290:CDS |
| AGGAGCTCAGAGTGATAGCA+AGG | 0.561366 | tig0016220:+495869 | Msa1358290:CDS |
| GGCTCAAACAAAGGTGCTGG+TGG | 0.561806 | tig0016220:-495906 | None:intergenic |
| GTTAATGCCAGTTCCAGTAA+TGG | 0.566105 | tig0016220:-497028 | None:intergenic |
| CCTGGTTACACCAAGGGTGA+TGG | 0.571890 | tig0016220:+496699 | Msa1358290:CDS |
| GAGCAATTCCTTTCAAGGCA+AGG | 0.588614 | tig0016220:+497279 | Msa1358290:CDS |
| CGTTATGAGTTGTATAAAGG+TGG | 0.591045 | tig0016220:+496660 | Msa1358290:CDS |
| CAGTGTCTTGGAGCTATCTG+TGG | 0.593126 | tig0016220:+496603 | Msa1358290:CDS |
| ACAGCAAACCCAATTGGAAG+AGG | 0.593192 | tig0016220:-496979 | None:intergenic |
| CAGCACCAAGACTCCTAGCT+GGG | 0.594486 | tig0016220:-497050 | None:intergenic |
| GTAGAATACTGCTCTTGTCA+AGG | 0.594791 | tig0016220:-496571 | None:intergenic |
| ATACAACAGAGACCATGCTT+GGG | 0.595986 | tig0016220:+497080 | Msa1358290:CDS |
| AGCCAGGAGAGTTGAAGTCA+TGG | 0.598254 | tig0016220:+495925 | Msa1358290:CDS |
| TTCCAGCAGTGCAATAGACA+AGG | 0.608111 | tig0016220:-496103 | None:intergenic |
| TGTGGTGCTGGTGTAGTGAA+AGG | 0.611215 | tig0016220:+496621 | Msa1358290:CDS |
| CCAACAGAAGCACACTTAGA+GGG | 0.621914 | tig0016220:-496038 | None:intergenic |
| ATACATGGTCATCCCAAGCA+TGG | 0.639779 | tig0016220:-497092 | None:intergenic |
| GAACTGGCATTAACCCAGCT+AGG | 0.641090 | tig0016220:+497037 | Msa1358290:CDS |
| ATTGAATGGTCTGTGGAGTG+TGG | 0.650898 | tig0016220:+497439 | Msa1358290:three_prime_UTR |
| TCCAGCAGTGCAATAGACAA+GGG | 0.662213 | tig0016220:-496102 | None:intergenic |
| GTGAATCCTGGTTACACCAA+GGG | 0.663817 | tig0016220:+496693 | Msa1358290:CDS |
| TGAACACATTGAATGGTCTG+TGG | 0.671527 | tig0016220:+497432 | Msa1358290:three_prime_UTR |
| AGGTGGGCACATAAATCCAG+CGG | 0.718916 | tig0016220:+496515 | Msa1358290:intron |
| TGTGAATCCTGGTTACACCA+AGG | 0.762851 | tig0016220:+496692 | Msa1358290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACTTTACTTTTTTTCTTTT+AGG | - | tig0016220:495619-495638 | None:intergenic | 15.0% |
| !! | ATACATATGAATATATGATT+TGG | - | tig0016220:497366-497385 | None:intergenic | 15.0% |
| !!! | AACTTTACTTTTTTTCTTTT+AGG | - | tig0016220:495619-495638 | None:intergenic | 15.0% |
| !! | ATACATATGAATATATGATT+TGG | - | tig0016220:497366-497385 | None:intergenic | 15.0% |
| !!! | TAATTTATATAGTGGGAATT+TGG | - | tig0016220:495697-495716 | None:intergenic | 20.0% |
| !! | GTGGTTATAATTTATATAGT+GGG | - | tig0016220:495704-495723 | None:intergenic | 20.0% |
| !! | AGTGGTTATAATTTATATAG+TGG | - | tig0016220:495705-495724 | None:intergenic | 20.0% |
| !! | ATTGAAGTTTATAATATCAG+TGG | - | tig0016220:495723-495742 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTCTCTCTCTTTT+TGG | - | tig0016220:495783-495802 | None:intergenic | 20.0% |
| !! | AAGAGAGAGAAAAAAAAATA+TGG | + | tig0016220:495785-495804 | Msa1358290:exon | 20.0% |
| !! | AGATTAATATATAAGATGTG+AGG | + | tig0016220:496405-496424 | Msa1358290:intron | 20.0% |
| !! | GATTAATATATAAGATGTGA+GGG | + | tig0016220:496406-496425 | Msa1358290:intron | 20.0% |
| !!! | ATGTTTGTATTTGTAGATTT+TGG | + | tig0016220:496954-496973 | Msa1358290:intron | 20.0% |
| !! | CAGAACAAAAAATAAATTGA+AGG | - | tig0016220:497146-497165 | None:intergenic | 20.0% |
| !!! | TATTTAATGTTTGAGTTTTG+TGG | + | tig0016220:497177-497196 | Msa1358290:intron | 20.0% |
| !!! | TAATTTATATAGTGGGAATT+TGG | - | tig0016220:495697-495716 | None:intergenic | 20.0% |
| !! | GTGGTTATAATTTATATAGT+GGG | - | tig0016220:495704-495723 | None:intergenic | 20.0% |
| !! | AGTGGTTATAATTTATATAG+TGG | - | tig0016220:495705-495724 | None:intergenic | 20.0% |
| !! | ATTGAAGTTTATAATATCAG+TGG | - | tig0016220:495723-495742 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTCTCTCTCTTTT+TGG | - | tig0016220:495783-495802 | None:intergenic | 20.0% |
| !! | AAGAGAGAGAAAAAAAAATA+TGG | + | tig0016220:495785-495804 | Msa1358290:exon | 20.0% |
| !! | AGATTAATATATAAGATGTG+AGG | + | tig0016220:496405-496424 | Msa1358290:intron | 20.0% |
| !! | GATTAATATATAAGATGTGA+GGG | + | tig0016220:496406-496425 | Msa1358290:intron | 20.0% |
| !!! | ATGTTTGTATTTGTAGATTT+TGG | + | tig0016220:496954-496973 | Msa1358290:intron | 20.0% |
| !! | CAGAACAAAAAATAAATTGA+AGG | - | tig0016220:497146-497165 | None:intergenic | 20.0% |
| !!! | TATTTAATGTTTGAGTTTTG+TGG | + | tig0016220:497177-497196 | Msa1358290:intron | 20.0% |
| ! | AGAGAAAAAAAAATATGGAG+AGG | + | tig0016220:495790-495809 | Msa1358290:exon | 25.0% |
| ! | GAGAAAAAAAAATATGGAGA+GGG | + | tig0016220:495791-495810 | Msa1358290:exon | 25.0% |
| !! | AAGTCTTTAATCTGAAATGT+TGG | + | tig0016220:496282-496301 | Msa1358290:intron | 25.0% |
| !! | TTTAATCTGAAATGTTGGTT+TGG | + | tig0016220:496287-496306 | Msa1358290:intron | 25.0% |
| !!! | TGATATATGCTTCATTTTTG+CGG | + | tig0016220:496915-496934 | Msa1358290:intron | 25.0% |
| !!! | AAATTAAACAGTGGATTTTC+TGG | + | tig0016220:497201-497220 | Msa1358290:intron | 25.0% |
| !!! | AATTAAACAGTGGATTTTCT+GGG | + | tig0016220:497202-497221 | Msa1358290:intron | 25.0% |
| ! | AGTAATTAATCCATCATCAT+CGG | + | tig0016220:497303-497322 | Msa1358290:exon | 25.0% |
| !!! | TTTTTTGTGTGTGTCTATTT+TGG | + | tig0016220:497340-497359 | Msa1358290:three_prime_UTR | 25.0% |
| ! | AAGAAAAACTCAAAAGAACT+AGG | - | tig0016220:497504-497523 | None:intergenic | 25.0% |
| ! | AGAGAAAAAAAAATATGGAG+AGG | + | tig0016220:495790-495809 | Msa1358290:exon | 25.0% |
| ! | GAGAAAAAAAAATATGGAGA+GGG | + | tig0016220:495791-495810 | Msa1358290:exon | 25.0% |
| !! | AAGTCTTTAATCTGAAATGT+TGG | + | tig0016220:496282-496301 | Msa1358290:intron | 25.0% |
| !! | TTTAATCTGAAATGTTGGTT+TGG | + | tig0016220:496287-496306 | Msa1358290:intron | 25.0% |
| !!! | TGATATATGCTTCATTTTTG+CGG | + | tig0016220:496915-496934 | Msa1358290:intron | 25.0% |
| !!! | AAATTAAACAGTGGATTTTC+TGG | + | tig0016220:497201-497220 | Msa1358290:intron | 25.0% |
| !!! | AATTAAACAGTGGATTTTCT+GGG | + | tig0016220:497202-497221 | Msa1358290:intron | 25.0% |
| ! | AGTAATTAATCCATCATCAT+CGG | + | tig0016220:497303-497322 | Msa1358290:exon | 25.0% |
| !!! | TTTTTTGTGTGTGTCTATTT+TGG | + | tig0016220:497340-497359 | Msa1358290:three_prime_UTR | 25.0% |
| ! | AAGAAAAACTCAAAAGAACT+AGG | - | tig0016220:497504-497523 | None:intergenic | 25.0% |
| !!! | TTTTCTTTTAGGATAGAGTG+TGG | - | tig0016220:495608-495627 | None:intergenic | 30.0% |
| TCATTGTTTATTTGCTTTGC+TGG | - | tig0016220:495659-495678 | None:intergenic | 30.0% | |
| AACTCAGAAGTGATTAGTAT+TGG | + | tig0016220:495752-495771 | Msa1358290:five_prime_UTR | 30.0% | |
| ACTCAGAAGTGATTAGTATT+GGG | + | tig0016220:495753-495772 | Msa1358290:five_prime_UTR | 30.0% | |
| AAAAAAAAATATGGAGAGGG+AGG | + | tig0016220:495794-495813 | Msa1358290:exon | 30.0% | |
| TTCTCAGAAAAGAATGCATT+GGG | + | tig0016220:495843-495862 | Msa1358290:CDS | 30.0% | |
| GTCAGTATTAGTGTCATATT+CGG | - | tig0016220:496184-496203 | None:intergenic | 30.0% | |
| TTTCAGATTAAAGACTTGTC+CGG | - | tig0016220:496279-496298 | None:intergenic | 30.0% | |
| TTTGAACAAAACTAACGAGA+TGG | + | tig0016220:496484-496503 | Msa1358290:intron | 30.0% | |
| TACATAATAATGCAGTGTCT+TGG | + | tig0016220:496591-496610 | Msa1358290:CDS | 30.0% | |
| TGAAATTCATTTACACGTAC+CGG | - | tig0016220:496816-496835 | None:intergenic | 30.0% | |
| ATGGTCTCTGTTGTATATTA+TGG | - | tig0016220:497076-497095 | None:intergenic | 30.0% | |
| ! | TTTTGTGGCAAATTAAACAG+TGG | + | tig0016220:497192-497211 | Msa1358290:intron | 30.0% |
| !!! | TTTTCTTTTAGGATAGAGTG+TGG | - | tig0016220:495608-495627 | None:intergenic | 30.0% |
| TCATTGTTTATTTGCTTTGC+TGG | - | tig0016220:495659-495678 | None:intergenic | 30.0% | |
| AACTCAGAAGTGATTAGTAT+TGG | + | tig0016220:495752-495771 | Msa1358290:five_prime_UTR | 30.0% | |
| ACTCAGAAGTGATTAGTATT+GGG | + | tig0016220:495753-495772 | Msa1358290:five_prime_UTR | 30.0% | |
| AAAAAAAAATATGGAGAGGG+AGG | + | tig0016220:495794-495813 | Msa1358290:exon | 30.0% | |
| TTCTCAGAAAAGAATGCATT+GGG | + | tig0016220:495843-495862 | Msa1358290:CDS | 30.0% | |
| GTCAGTATTAGTGTCATATT+CGG | - | tig0016220:496184-496203 | None:intergenic | 30.0% | |
| TTTCAGATTAAAGACTTGTC+CGG | - | tig0016220:496279-496298 | None:intergenic | 30.0% | |
| TTTGAACAAAACTAACGAGA+TGG | + | tig0016220:496484-496503 | Msa1358290:intron | 30.0% | |
| TACATAATAATGCAGTGTCT+TGG | + | tig0016220:496591-496610 | Msa1358290:CDS | 30.0% | |
| TGAAATTCATTTACACGTAC+CGG | - | tig0016220:496816-496835 | None:intergenic | 30.0% | |
| ATGGTCTCTGTTGTATATTA+TGG | - | tig0016220:497076-497095 | None:intergenic | 30.0% | |
| ! | TTTTGTGGCAAATTAAACAG+TGG | + | tig0016220:497192-497211 | Msa1358290:intron | 30.0% |
| ! | GCTTTGCTGGCTAATAATAA+CGG | - | tig0016220:495646-495665 | None:intergenic | 35.0% |
| GTTCTCAGAAAAGAATGCAT+TGG | + | tig0016220:495842-495861 | Msa1358290:CDS | 35.0% | |
| !! | TCATGGTCATTTTATAGAGC+TGG | + | tig0016220:495942-495961 | Msa1358290:CDS | 35.0% |
| !! | CATGGTCATTTTATAGAGCT+GGG | + | tig0016220:495943-495962 | Msa1358290:CDS | 35.0% |
| !! | ATGGTCATTTTATAGAGCTG+GGG | + | tig0016220:495944-495963 | Msa1358290:CDS | 35.0% |
| CAGTTAAGACAGTGATGTAA+AGG | - | tig0016220:495998-496017 | None:intergenic | 35.0% | |
| ATCACTGTCTTAACTGTGAT+GGG | + | tig0016220:496002-496021 | Msa1358290:CDS | 35.0% | |
| TTGGTATTCAAGGAATTGCT+TGG | + | tig0016220:496057-496076 | Msa1358290:CDS | 35.0% | |
| TGGTATTCAAGGAATTGCTT+GGG | + | tig0016220:496058-496077 | Msa1358290:CDS | 35.0% | |
| TCAATGTGTCACATAAACAC+CGG | + | tig0016220:496257-496276 | Msa1358290:intron | 35.0% | |
| AAGATGTGAGGGACTAAATT+AGG | + | tig0016220:496417-496436 | Msa1358290:intron | 35.0% | |
| AGATGTGAGGGACTAAATTA+GGG | + | tig0016220:496418-496437 | Msa1358290:intron | 35.0% | |
| AACAAAACTAACGAGATGGT+TGG | + | tig0016220:496488-496507 | Msa1358290:intron | 35.0% | |
| ACAAAACTAACGAGATGGTT+GGG | + | tig0016220:496489-496508 | Msa1358290:intron | 35.0% | |
| GCTCGTTATGAGTTGTATAA+AGG | + | tig0016220:496657-496676 | Msa1358290:CDS | 35.0% | |
| CGTTATGAGTTGTATAAAGG+TGG | + | tig0016220:496660-496679 | Msa1358290:CDS | 35.0% | |
| AAAAACACAGCAAACCCAAT+TGG | - | tig0016220:496988-497007 | None:intergenic | 35.0% | |
| !!! | AATTGGGTTTGCTGTGTTTT+TGG | + | tig0016220:496987-497006 | Msa1358290:CDS | 35.0% |
| TTAATGCCAGTTCCAGTAAT+GGG | - | tig0016220:497030-497049 | None:intergenic | 35.0% | |
| ! | GCTTTGCTGGCTAATAATAA+CGG | - | tig0016220:495646-495665 | None:intergenic | 35.0% |
| GTTCTCAGAAAAGAATGCAT+TGG | + | tig0016220:495842-495861 | Msa1358290:CDS | 35.0% | |
| !! | TCATGGTCATTTTATAGAGC+TGG | + | tig0016220:495942-495961 | Msa1358290:CDS | 35.0% |
| !! | CATGGTCATTTTATAGAGCT+GGG | + | tig0016220:495943-495962 | Msa1358290:CDS | 35.0% |
| !! | ATGGTCATTTTATAGAGCTG+GGG | + | tig0016220:495944-495963 | Msa1358290:CDS | 35.0% |
| CAGTTAAGACAGTGATGTAA+AGG | - | tig0016220:495998-496017 | None:intergenic | 35.0% | |
| ATCACTGTCTTAACTGTGAT+GGG | + | tig0016220:496002-496021 | Msa1358290:CDS | 35.0% | |
| TTGGTATTCAAGGAATTGCT+TGG | + | tig0016220:496057-496076 | Msa1358290:CDS | 35.0% | |
| TGGTATTCAAGGAATTGCTT+GGG | + | tig0016220:496058-496077 | Msa1358290:CDS | 35.0% | |
| TCAATGTGTCACATAAACAC+CGG | + | tig0016220:496257-496276 | Msa1358290:intron | 35.0% | |
| AAGATGTGAGGGACTAAATT+AGG | + | tig0016220:496417-496436 | Msa1358290:intron | 35.0% | |
| AGATGTGAGGGACTAAATTA+GGG | + | tig0016220:496418-496437 | Msa1358290:intron | 35.0% | |
| AACAAAACTAACGAGATGGT+TGG | + | tig0016220:496488-496507 | Msa1358290:intron | 35.0% | |
| ACAAAACTAACGAGATGGTT+GGG | + | tig0016220:496489-496508 | Msa1358290:intron | 35.0% | |
| GCTCGTTATGAGTTGTATAA+AGG | + | tig0016220:496657-496676 | Msa1358290:CDS | 35.0% | |
| CGTTATGAGTTGTATAAAGG+TGG | + | tig0016220:496660-496679 | Msa1358290:CDS | 35.0% | |
| AAAAACACAGCAAACCCAAT+TGG | - | tig0016220:496988-497007 | None:intergenic | 35.0% | |
| !!! | AATTGGGTTTGCTGTGTTTT+TGG | + | tig0016220:496987-497006 | Msa1358290:CDS | 35.0% |
| TTAATGCCAGTTCCAGTAAT+GGG | - | tig0016220:497030-497049 | None:intergenic | 35.0% | |
| CATCACTGTCTTAACTGTGA+TGG | + | tig0016220:496001-496020 | Msa1358290:CDS | 40.0% | |
| !! | TAACTGTGATGGGTGTGAAT+AGG | + | tig0016220:496012-496031 | Msa1358290:CDS | 40.0% |
| TGTGCTTCTGTTGGTATTCA+AGG | + | tig0016220:496047-496066 | Msa1358290:CDS | 40.0% | |
| TATTGCACTGCTGGAATTTC+AGG | + | tig0016220:496110-496129 | Msa1358290:CDS | 40.0% | |
| GCATCACCATCTTGAAATTG+TGG | - | tig0016220:496447-496466 | None:intergenic | 40.0% | |
| ATAAATCCAGCGGTGACATT+CGG | + | tig0016220:496525-496544 | Msa1358290:CDS | 40.0% | |
| !! | GGTGACATTCGGTTTGTTTT+TGG | + | tig0016220:496536-496555 | Msa1358290:CDS | 40.0% |
| !!! | CATTCGGTTTGTTTTTGGCT+AGG | + | tig0016220:496541-496560 | Msa1358290:CDS | 40.0% |
| GTAGAATACTGCTCTTGTCA+AGG | - | tig0016220:496574-496593 | None:intergenic | 40.0% | |
| ! | TGGTGTAGTGAAAGGTTTTG+AGG | + | tig0016220:496629-496648 | Msa1358290:CDS | 40.0% |
| !! | GGTGTAGTGAAAGGTTTTGA+GGG | + | tig0016220:496630-496649 | Msa1358290:CDS | 40.0% |
| AGAGTCTCTTGCATTTCTCT+TGG | - | tig0016220:496787-496806 | None:intergenic | 40.0% | |
| !! | ATTTTGGCACCTCTTCCAAT+TGG | + | tig0016220:496970-496989 | Msa1358290:CDS | 40.0% |
| ! | TTTTGGCACCTCTTCCAATT+GGG | + | tig0016220:496971-496990 | Msa1358290:CDS | 40.0% |
| !!! | TGCTGTGTTTTTGGTTCACT+TGG | + | tig0016220:496996-497015 | Msa1358290:CDS | 40.0% |
| TTGGCTACAATTCCCATTAC+TGG | + | tig0016220:497015-497034 | Msa1358290:CDS | 40.0% | |
| ACAATTCCCATTACTGGAAC+TGG | + | tig0016220:497021-497040 | Msa1358290:CDS | 40.0% | |
| GTTAATGCCAGTTCCAGTAA+TGG | - | tig0016220:497031-497050 | None:intergenic | 40.0% | |
| TATACAACAGAGACCATGCT+TGG | + | tig0016220:497079-497098 | Msa1358290:CDS | 40.0% | |
| ATACAACAGAGACCATGCTT+GGG | + | tig0016220:497080-497099 | Msa1358290:CDS | 40.0% | |
| ACAAAGTGGAAGGACATACA+TGG | - | tig0016220:497110-497129 | None:intergenic | 40.0% | |
| CAACAGCATAACAAAGTGGA+AGG | - | tig0016220:497120-497139 | None:intergenic | 40.0% | |
| ! | TCCACTTTGTTATGCTGTTG+TGG | + | tig0016220:497120-497139 | Msa1358290:intron | 40.0% |
| !! | AAACAGTGGATTTTCTGGGT+TGG | + | tig0016220:497206-497225 | Msa1358290:intron | 40.0% |
| TTGCCTTGAAAGGAATTGCT+CGG | - | tig0016220:497280-497299 | None:intergenic | 40.0% | |
| AGCAATTCCTTTCAAGGCAA+GGG | + | tig0016220:497280-497299 | Msa1358290:CDS | 40.0% | |
| AATTACTCCCTTGCCTTGAA+AGG | - | tig0016220:497290-497309 | None:intergenic | 40.0% | |
| CGTGAACTGAACACATTGAA+TGG | + | tig0016220:497425-497444 | Msa1358290:three_prime_UTR | 40.0% | |
| TGAACACATTGAATGGTCTG+TGG | + | tig0016220:497432-497451 | Msa1358290:three_prime_UTR | 40.0% | |
| CATCACTGTCTTAACTGTGA+TGG | + | tig0016220:496001-496020 | Msa1358290:CDS | 40.0% | |
| !! | TAACTGTGATGGGTGTGAAT+AGG | + | tig0016220:496012-496031 | Msa1358290:CDS | 40.0% |
| TGTGCTTCTGTTGGTATTCA+AGG | + | tig0016220:496047-496066 | Msa1358290:CDS | 40.0% | |
| TATTGCACTGCTGGAATTTC+AGG | + | tig0016220:496110-496129 | Msa1358290:CDS | 40.0% | |
| GCATCACCATCTTGAAATTG+TGG | - | tig0016220:496447-496466 | None:intergenic | 40.0% | |
| ATAAATCCAGCGGTGACATT+CGG | + | tig0016220:496525-496544 | Msa1358290:CDS | 40.0% | |
| !! | GGTGACATTCGGTTTGTTTT+TGG | + | tig0016220:496536-496555 | Msa1358290:CDS | 40.0% |
| !!! | CATTCGGTTTGTTTTTGGCT+AGG | + | tig0016220:496541-496560 | Msa1358290:CDS | 40.0% |
| GTAGAATACTGCTCTTGTCA+AGG | - | tig0016220:496574-496593 | None:intergenic | 40.0% | |
| ! | TGGTGTAGTGAAAGGTTTTG+AGG | + | tig0016220:496629-496648 | Msa1358290:CDS | 40.0% |
| !! | GGTGTAGTGAAAGGTTTTGA+GGG | + | tig0016220:496630-496649 | Msa1358290:CDS | 40.0% |
| AGAGTCTCTTGCATTTCTCT+TGG | - | tig0016220:496787-496806 | None:intergenic | 40.0% | |
| !! | ATTTTGGCACCTCTTCCAAT+TGG | + | tig0016220:496970-496989 | Msa1358290:CDS | 40.0% |
| ! | TTTTGGCACCTCTTCCAATT+GGG | + | tig0016220:496971-496990 | Msa1358290:CDS | 40.0% |
| !!! | TGCTGTGTTTTTGGTTCACT+TGG | + | tig0016220:496996-497015 | Msa1358290:CDS | 40.0% |
| TTGGCTACAATTCCCATTAC+TGG | + | tig0016220:497015-497034 | Msa1358290:CDS | 40.0% | |
| ACAATTCCCATTACTGGAAC+TGG | + | tig0016220:497021-497040 | Msa1358290:CDS | 40.0% | |
| GTTAATGCCAGTTCCAGTAA+TGG | - | tig0016220:497031-497050 | None:intergenic | 40.0% | |
| TATACAACAGAGACCATGCT+TGG | + | tig0016220:497079-497098 | Msa1358290:CDS | 40.0% | |
| ATACAACAGAGACCATGCTT+GGG | + | tig0016220:497080-497099 | Msa1358290:CDS | 40.0% | |
| ACAAAGTGGAAGGACATACA+TGG | - | tig0016220:497110-497129 | None:intergenic | 40.0% | |
| CAACAGCATAACAAAGTGGA+AGG | - | tig0016220:497120-497139 | None:intergenic | 40.0% | |
| ! | TCCACTTTGTTATGCTGTTG+TGG | + | tig0016220:497120-497139 | Msa1358290:intron | 40.0% |
| !! | AAACAGTGGATTTTCTGGGT+TGG | + | tig0016220:497206-497225 | Msa1358290:intron | 40.0% |
| TTGCCTTGAAAGGAATTGCT+CGG | - | tig0016220:497280-497299 | None:intergenic | 40.0% | |
| AGCAATTCCTTTCAAGGCAA+GGG | + | tig0016220:497280-497299 | Msa1358290:CDS | 40.0% | |
| AATTACTCCCTTGCCTTGAA+AGG | - | tig0016220:497290-497309 | None:intergenic | 40.0% | |
| CGTGAACTGAACACATTGAA+TGG | + | tig0016220:497425-497444 | Msa1358290:three_prime_UTR | 40.0% | |
| TGAACACATTGAATGGTCTG+TGG | + | tig0016220:497432-497451 | Msa1358290:three_prime_UTR | 40.0% | |
| AGGGAGGAAGATGTTAAGGT+TGG | + | tig0016220:495810-495829 | Msa1358290:CDS | 45.0% | |
| GAAAAGAATGCATTGGGCAC+AGG | + | tig0016220:495849-495868 | Msa1358290:CDS | 45.0% | |
| GAGTGATAGCAAGGACTACA+AGG | + | tig0016220:495878-495897 | Msa1358290:CDS | 45.0% | |
| AACTCTCCTGGCTCAAACAA+AGG | - | tig0016220:495918-495937 | None:intergenic | 45.0% | |
| ! | CCAACAGAAGCACACTTAGA+GGG | - | tig0016220:496041-496060 | None:intergenic | 45.0% |
| ! | ACCAACAGAAGCACACTTAG+AGG | - | tig0016220:496042-496061 | None:intergenic | 45.0% |
| ! | CAAGGAATTGCTTGGGCTTT+TGG | + | tig0016220:496065-496084 | Msa1358290:CDS | 45.0% |
| TCCAGCAGTGCAATAGACAA+GGG | - | tig0016220:496105-496124 | None:intergenic | 45.0% | |
| TTCCAGCAGTGCAATAGACA+AGG | - | tig0016220:496106-496125 | None:intergenic | 45.0% | |
| GGGACTCCACAATTTCAAGA+TGG | + | tig0016220:496438-496457 | Msa1358290:intron | 45.0% | |
| GGAGCAAATGTTGTGAATCC+TGG | + | tig0016220:496681-496700 | Msa1358290:CDS | 45.0% | |
| TGTGAATCCTGGTTACACCA+AGG | + | tig0016220:496692-496711 | Msa1358290:CDS | 45.0% | |
| GTGAATCCTGGTTACACCAA+GGG | + | tig0016220:496693-496712 | Msa1358290:CDS | 45.0% | |
| TGCATTTCTCTTGGCATCAG+TGG | - | tig0016220:496778-496797 | None:intergenic | 45.0% | |
| ACAGCAAACCCAATTGGAAG+AGG | - | tig0016220:496982-497001 | None:intergenic | 45.0% | |
| ATTAACCCAGCTAGGAGTCT+TGG | + | tig0016220:497045-497064 | Msa1358290:CDS | 45.0% | |
| ATACATGGTCATCCCAAGCA+TGG | - | tig0016220:497095-497114 | None:intergenic | 45.0% | |
| GCCACAACAGCATAACAAAG+TGG | - | tig0016220:497124-497143 | None:intergenic | 45.0% | |
| ! | TTCTGGGTTGGACCTTTCAT+TGG | + | tig0016220:497218-497237 | Msa1358290:CDS | 45.0% |
| GAATTGCTCGGATCACTATC+TGG | - | tig0016220:497268-497287 | None:intergenic | 45.0% | |
| GATCCGAGCAATTCCTTTCA+AGG | + | tig0016220:497274-497293 | Msa1358290:CDS | 45.0% | |
| GAGCAATTCCTTTCAAGGCA+AGG | + | tig0016220:497279-497298 | Msa1358290:CDS | 45.0% | |
| ATTGAATGGTCTGTGGAGTG+TGG | + | tig0016220:497439-497458 | Msa1358290:three_prime_UTR | 45.0% | |
| AGGGAGGAAGATGTTAAGGT+TGG | + | tig0016220:495810-495829 | Msa1358290:CDS | 45.0% | |
| GAAAAGAATGCATTGGGCAC+AGG | + | tig0016220:495849-495868 | Msa1358290:CDS | 45.0% | |
| GAGTGATAGCAAGGACTACA+AGG | + | tig0016220:495878-495897 | Msa1358290:CDS | 45.0% | |
| AACTCTCCTGGCTCAAACAA+AGG | - | tig0016220:495918-495937 | None:intergenic | 45.0% | |
| ! | CCAACAGAAGCACACTTAGA+GGG | - | tig0016220:496041-496060 | None:intergenic | 45.0% |
| ! | ACCAACAGAAGCACACTTAG+AGG | - | tig0016220:496042-496061 | None:intergenic | 45.0% |
| ! | CAAGGAATTGCTTGGGCTTT+TGG | + | tig0016220:496065-496084 | Msa1358290:CDS | 45.0% |
| TCCAGCAGTGCAATAGACAA+GGG | - | tig0016220:496105-496124 | None:intergenic | 45.0% | |
| TTCCAGCAGTGCAATAGACA+AGG | - | tig0016220:496106-496125 | None:intergenic | 45.0% | |
| GGGACTCCACAATTTCAAGA+TGG | + | tig0016220:496438-496457 | Msa1358290:intron | 45.0% | |
| GGAGCAAATGTTGTGAATCC+TGG | + | tig0016220:496681-496700 | Msa1358290:CDS | 45.0% | |
| TGTGAATCCTGGTTACACCA+AGG | + | tig0016220:496692-496711 | Msa1358290:CDS | 45.0% | |
| GTGAATCCTGGTTACACCAA+GGG | + | tig0016220:496693-496712 | Msa1358290:CDS | 45.0% | |
| TGCATTTCTCTTGGCATCAG+TGG | - | tig0016220:496778-496797 | None:intergenic | 45.0% | |
| ACAGCAAACCCAATTGGAAG+AGG | - | tig0016220:496982-497001 | None:intergenic | 45.0% | |
| ATTAACCCAGCTAGGAGTCT+TGG | + | tig0016220:497045-497064 | Msa1358290:CDS | 45.0% | |
| ATACATGGTCATCCCAAGCA+TGG | - | tig0016220:497095-497114 | None:intergenic | 45.0% | |
| GCCACAACAGCATAACAAAG+TGG | - | tig0016220:497124-497143 | None:intergenic | 45.0% | |
| ! | TTCTGGGTTGGACCTTTCAT+TGG | + | tig0016220:497218-497237 | Msa1358290:CDS | 45.0% |
| GAATTGCTCGGATCACTATC+TGG | - | tig0016220:497268-497287 | None:intergenic | 45.0% | |
| GATCCGAGCAATTCCTTTCA+AGG | + | tig0016220:497274-497293 | Msa1358290:CDS | 45.0% | |
| GAGCAATTCCTTTCAAGGCA+AGG | + | tig0016220:497279-497298 | Msa1358290:CDS | 45.0% | |
| ATTGAATGGTCTGTGGAGTG+TGG | + | tig0016220:497439-497458 | Msa1358290:three_prime_UTR | 45.0% | |
| GGAGAGGGAGGAAGATGTTA+AGG | + | tig0016220:495806-495825 | Msa1358290:CDS | 50.0% | |
| AGGAGCTCAGAGTGATAGCA+AGG | + | tig0016220:495869-495888 | Msa1358290:CDS | 50.0% | |
| AGCCAGGAGAGTTGAAGTCA+TGG | + | tig0016220:495925-495944 | Msa1358290:CDS | 50.0% | |
| GACCATGACTTCAACTCTCC+TGG | - | tig0016220:495930-495949 | None:intergenic | 50.0% | |
| CCCTCTAAGTGTGCTTCTGT+TGG | + | tig0016220:496038-496057 | Msa1358290:CDS | 50.0% | |
| ! | GGAATTGCTTGGGCTTTTGG+TGG | + | tig0016220:496068-496087 | Msa1358290:CDS | 50.0% |
| CTAACGAGATGGTTGGGAAC+AGG | + | tig0016220:496495-496514 | Msa1358290:intron | 50.0% | |
| AGGTGGGCACATAAATCCAG+CGG | + | tig0016220:496515-496534 | Msa1358290:intron | 50.0% | |
| AACAAACCGAATGTCACCGC+TGG | - | tig0016220:496534-496553 | None:intergenic | 50.0% | |
| CAGTGTCTTGGAGCTATCTG+TGG | + | tig0016220:496603-496622 | Msa1358290:CDS | 50.0% | |
| !! | TGTGGTGCTGGTGTAGTGAA+AGG | + | tig0016220:496621-496640 | Msa1358290:CDS | 50.0% |
| ! | TACACCAAGGGTGATGGTCT+TGG | + | tig0016220:496705-496724 | Msa1358290:CDS | 50.0% |
| GGTCTTGGAGCTGAGATTGT+TGG | + | tig0016220:496720-496739 | Msa1358290:CDS | 50.0% | |
| TGCAAGAGACTCTCACGTTC+CGG | + | tig0016220:496794-496813 | Msa1358290:CDS | 50.0% | |
| GAACTGGCATTAACCCAGCT+AGG | + | tig0016220:497037-497056 | Msa1358290:CDS | 50.0% | |
| GCAAGTGCAGCTCCAATGAA+AGG | - | tig0016220:497233-497252 | None:intergenic | 50.0% | |
| AGCACACATGCCGATGATGA+TGG | - | tig0016220:497316-497335 | None:intergenic | 50.0% | |
| GGAGAGGGAGGAAGATGTTA+AGG | + | tig0016220:495806-495825 | Msa1358290:CDS | 50.0% | |
| AGGAGCTCAGAGTGATAGCA+AGG | + | tig0016220:495869-495888 | Msa1358290:CDS | 50.0% | |
| AGCCAGGAGAGTTGAAGTCA+TGG | + | tig0016220:495925-495944 | Msa1358290:CDS | 50.0% | |
| GACCATGACTTCAACTCTCC+TGG | - | tig0016220:495930-495949 | None:intergenic | 50.0% | |
| CCCTCTAAGTGTGCTTCTGT+TGG | + | tig0016220:496038-496057 | Msa1358290:CDS | 50.0% | |
| ! | GGAATTGCTTGGGCTTTTGG+TGG | + | tig0016220:496068-496087 | Msa1358290:CDS | 50.0% |
| CTAACGAGATGGTTGGGAAC+AGG | + | tig0016220:496495-496514 | Msa1358290:intron | 50.0% | |
| AGGTGGGCACATAAATCCAG+CGG | + | tig0016220:496515-496534 | Msa1358290:intron | 50.0% | |
| AACAAACCGAATGTCACCGC+TGG | - | tig0016220:496534-496553 | None:intergenic | 50.0% | |
| CAGTGTCTTGGAGCTATCTG+TGG | + | tig0016220:496603-496622 | Msa1358290:CDS | 50.0% | |
| !! | TGTGGTGCTGGTGTAGTGAA+AGG | + | tig0016220:496621-496640 | Msa1358290:CDS | 50.0% |
| ! | TACACCAAGGGTGATGGTCT+TGG | + | tig0016220:496705-496724 | Msa1358290:CDS | 50.0% |
| GGTCTTGGAGCTGAGATTGT+TGG | + | tig0016220:496720-496739 | Msa1358290:CDS | 50.0% | |
| TGCAAGAGACTCTCACGTTC+CGG | + | tig0016220:496794-496813 | Msa1358290:CDS | 50.0% | |
| GAACTGGCATTAACCCAGCT+AGG | + | tig0016220:497037-497056 | Msa1358290:CDS | 50.0% | |
| GCAAGTGCAGCTCCAATGAA+AGG | - | tig0016220:497233-497252 | None:intergenic | 50.0% | |
| AGCACACATGCCGATGATGA+TGG | - | tig0016220:497316-497335 | None:intergenic | 50.0% | |
| !! | GGCTCAAACAAAGGTGCTGG+TGG | - | tig0016220:495909-495928 | None:intergenic | 55.0% |
| ! | CCTGGCTCAAACAAAGGTGC+TGG | - | tig0016220:495912-495931 | None:intergenic | 55.0% |
| ! | CCAGCACCTTTGTTTGAGCC+AGG | + | tig0016220:495909-495928 | Msa1358290:CDS | 55.0% |
| GCCCTTGTCTATTGCACTGC+TGG | + | tig0016220:496101-496120 | Msa1358290:CDS | 55.0% | |
| ACGAGATGGTTGGGAACAGG+TGG | + | tig0016220:496498-496517 | Msa1358290:intron | 55.0% | |
| CGAGATGGTTGGGAACAGGT+GGG | + | tig0016220:496499-496518 | Msa1358290:intron | 55.0% | |
| CTTGGAGCTATCTGTGGTGC+TGG | + | tig0016220:496609-496628 | Msa1358290:CDS | 55.0% | |
| ! | CCATCACCCTTGGTGTAACC+AGG | - | tig0016220:496702-496721 | None:intergenic | 55.0% |
| CCTGGTTACACCAAGGGTGA+TGG | + | tig0016220:496699-496718 | Msa1358290:CDS | 55.0% | |
| AGCTCCAAGACCATCACCCT+TGG | - | tig0016220:496712-496731 | None:intergenic | 55.0% | |
| CAGCACCAAGACTCCTAGCT+GGG | - | tig0016220:497053-497072 | None:intergenic | 55.0% | |
| !! | GGCTCAAACAAAGGTGCTGG+TGG | - | tig0016220:495909-495928 | None:intergenic | 55.0% |
| ! | CCTGGCTCAAACAAAGGTGC+TGG | - | tig0016220:495912-495931 | None:intergenic | 55.0% |
| ! | CCAGCACCTTTGTTTGAGCC+AGG | + | tig0016220:495909-495928 | Msa1358290:CDS | 55.0% |
| GCCCTTGTCTATTGCACTGC+TGG | + | tig0016220:496101-496120 | Msa1358290:CDS | 55.0% | |
| ACGAGATGGTTGGGAACAGG+TGG | + | tig0016220:496498-496517 | Msa1358290:intron | 55.0% | |
| CGAGATGGTTGGGAACAGGT+GGG | + | tig0016220:496499-496518 | Msa1358290:intron | 55.0% | |
| CTTGGAGCTATCTGTGGTGC+TGG | + | tig0016220:496609-496628 | Msa1358290:CDS | 55.0% | |
| ! | CCATCACCCTTGGTGTAACC+AGG | - | tig0016220:496702-496721 | None:intergenic | 55.0% |
| CCTGGTTACACCAAGGGTGA+TGG | + | tig0016220:496699-496718 | Msa1358290:CDS | 55.0% | |
| AGCTCCAAGACCATCACCCT+TGG | - | tig0016220:496712-496731 | None:intergenic | 55.0% | |
| CAGCACCAAGACTCCTAGCT+GGG | - | tig0016220:497053-497072 | None:intergenic | 55.0% | |
| GCAGCACCAAGACTCCTAGC+TGG | - | tig0016220:497054-497073 | None:intergenic | 60.0% | |
| GCAGCACCAAGACTCCTAGC+TGG | - | tig0016220:497054-497073 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0016220 | gene | 495596 | 497566 | 495596 | ID=Msa1358290;Name=Msa1358290 |
| tig0016220 | mRNA | 495596 | 497566 | 495596 | ID=Msa1358290-mRNA-1;Parent=Msa1358290;Name=Msa1358290-mRNA-1;_AED=0.02;_eAED=0.02;_QI=208|1|1|1|1|1|4|259|287 |
| tig0016220 | exon | 495596 | 496131 | 495596 | ID=Msa1358290-mRNA-1:exon:10711;Parent=Msa1358290-mRNA-1 |
| tig0016220 | exon | 496517 | 496815 | 496517 | ID=Msa1358290-mRNA-1:exon:10712;Parent=Msa1358290-mRNA-1 |
| tig0016220 | exon | 496970 | 497110 | 496970 | ID=Msa1358290-mRNA-1:exon:10713;Parent=Msa1358290-mRNA-1 |
| tig0016220 | exon | 497212 | 497566 | 497212 | ID=Msa1358290-mRNA-1:exon:10714;Parent=Msa1358290-mRNA-1 |
| tig0016220 | five_prime_UTR | 495596 | 495803 | 495596 | ID=Msa1358290-mRNA-1:five_prime_utr;Parent=Msa1358290-mRNA-1 |
| tig0016220 | CDS | 495804 | 496131 | 495804 | ID=Msa1358290-mRNA-1:cds;Parent=Msa1358290-mRNA-1 |
| tig0016220 | CDS | 496517 | 496815 | 496517 | ID=Msa1358290-mRNA-1:cds;Parent=Msa1358290-mRNA-1 |
| tig0016220 | CDS | 496970 | 497110 | 496970 | ID=Msa1358290-mRNA-1:cds;Parent=Msa1358290-mRNA-1 |
| tig0016220 | CDS | 497212 | 497307 | 497212 | ID=Msa1358290-mRNA-1:cds;Parent=Msa1358290-mRNA-1 |
| tig0016220 | three_prime_UTR | 497308 | 497566 | 497308 | ID=Msa1358290-mRNA-1:three_prime_utr;Parent=Msa1358290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
