Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1157800 | XP_003624504.2 | 96.040 | 404 | 10 | 3 | 1 | 401 | 1 | 401 | 0.0 | 774 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1157800 | G7KX98 | 96.040 | 404 | 10 | 3 | 1 | 401 | 1 | 401 | 0.0 | 774 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0693210 | Msa1157800 | 0.810173 | 1.314567e-50 | -8.615850e-47 |
| Msa0838370 | Msa1157800 | 0.821526 | 3.852695e-53 | -8.615850e-47 |
| Msa1157800 | Msa1157840 | 0.910391 | 1.974567e-82 | -8.615850e-47 |
| Msa1157800 | Msa1339730 | 0.827505 | 1.507795e-54 | -8.615850e-47 |
| Msa0858440 | Msa1157800 | 0.828119 | 1.072970e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1157800 | MtrunA17_Chr7g0252191 | 96.040 | 404 | 10 | 3 | 1 | 401 | 1 | 401 | 0.0 | 774 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1157800 | AT5G13970.1 | 36.591 | 440 | 200 | 18 | 1 | 398 | 1 | 403 | 5.09e-58 | 195 |
| Msa1157800 | AT5G13310.1 | 31.579 | 418 | 197 | 16 | 5 | 395 | 11 | 366 | 3.80e-24 | 103 |
| Msa1157800 | AT5G13310.2 | 31.579 | 418 | 197 | 16 | 5 | 395 | 11 | 366 | 3.80e-24 | 103 |
Find 160 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTCAAACTTGGGGTCT+TGG | 0.177783 | 7_4:-46834374 | Msa1157800:three_prime_UTR |
| ATCAAACCGAACACGTTTAT+TGG | 0.185704 | 7_4:+46835113 | None:intergenic |
| TTGGGTTTGGGTTTGGGTTC+GGG | 0.192664 | 7_4:+46836586 | None:intergenic |
| TCCATGGTTGATTCAATTCT+TGG | 0.219134 | 7_4:+46836703 | None:intergenic |
| TCGGGTTTGGGTTTGGGTTT+GGG | 0.231681 | 7_4:+46836580 | None:intergenic |
| AATTGAAGTGTAAGGGTATA+AGG | 0.232892 | 7_4:+46836794 | None:intergenic |
| ATCGGGTTTGGGTTTGGGTT+TGG | 0.236858 | 7_4:+46836579 | None:intergenic |
| TCGGAATCGGGTTTGGGTTT+GGG | 0.244347 | 7_4:+46836574 | None:intergenic |
| TTCGGAATCGGGTTTGGGTT+TGG | 0.258842 | 7_4:+46836573 | None:intergenic |
| TTTGGGTTTGGGTTTGGGTT+CGG | 0.259289 | 7_4:+46836585 | None:intergenic |
| AGTTTCCTTGCACAGATAAA+AGG | 0.269056 | 7_4:-46834856 | Msa1157800:CDS |
| CATGGATGACAAAGCAAATA+AGG | 0.282071 | 7_4:-46834890 | Msa1157800:CDS |
| GAAGATTTAGCCGACTATAT+AGG | 0.290792 | 7_4:+46836875 | None:intergenic |
| TTTAGGTTCGGAATCGGGTT+TGG | 0.298031 | 7_4:+46836567 | None:intergenic |
| GAAGAAGTAGGGTAGGGTTT+AGG | 0.306341 | 7_4:+46836550 | None:intergenic |
| TTCCTTCTTCCGCCTCTCTT+TGG | 0.309715 | 7_4:-46836633 | Msa1157800:CDS |
| TCATAGTGCAGTACAGAAAA+AGG | 0.310729 | 7_4:+46834134 | None:intergenic |
| TCTTTCAAACTTGGGGTCTT+GGG | 0.321528 | 7_4:-46834373 | Msa1157800:three_prime_UTR |
| AGATTTCTTCTTCGGTATAA+AGG | 0.324848 | 7_4:+46834783 | None:intergenic |
| TTAGGTTCGGAATCGGGTTT+GGG | 0.336204 | 7_4:+46836568 | None:intergenic |
| CTTCCGAGAGACTCTTGAAT+TGG | 0.339867 | 7_4:-46836856 | Msa1157800:five_prime_UTR |
| TCATCGGCAGCTATGCTAAC+AGG | 0.343183 | 7_4:+46834694 | None:intergenic |
| AGCCTACTGTGTAGCATGTT+TGG | 0.351455 | 7_4:-46834546 | Msa1157800:exon |
| TCAAACCGAACACGTTTATT+GGG | 0.352578 | 7_4:+46835114 | None:intergenic |
| GAAGGATTGCGAATATAATC+AGG | 0.355445 | 7_4:+46834949 | None:intergenic |
| CCACTGTTCATCATTGTAAT+CGG | 0.362769 | 7_4:+46836429 | None:intergenic |
| GGGATAAGTTCACGTGCGTT+TGG | 0.366157 | 7_4:-46835324 | Msa1157800:CDS |
| GAAATCTGGTGATGTCACTA+TGG | 0.375778 | 7_4:-46834767 | Msa1157800:CDS |
| ATGATGAACAGTGGGAAATT+AGG | 0.378613 | 7_4:-46836420 | Msa1157800:CDS |
| TTCGGGTTTGATTTCGTCTT+CGG | 0.382495 | 7_4:+46836603 | None:intergenic |
| TTGTAATCGGAGGGTTTAGA+TGG | 0.383913 | 7_4:+46836442 | None:intergenic |
| AGGCTCTTGGCAAAGAGGGC+AGG | 0.383943 | 7_4:-46835389 | Msa1157800:CDS |
| GTAGGGTTTAGGTTCGGAAT+CGG | 0.390443 | 7_4:+46836561 | None:intergenic |
| AAGATTTAGCCGACTATATA+GGG | 0.392613 | 7_4:+46836876 | None:intergenic |
| GCAAATTCCTGTGACTTTGA+TGG | 0.394108 | 7_4:+46834982 | None:intergenic |
| CTCAAGCTCAACTTTGAAAC+CGG | 0.394462 | 7_4:+46836516 | None:intergenic |
| ATGCAAAGTATCAATTTGAT+TGG | 0.400728 | 7_4:+46835230 | None:intergenic |
| CTCTTGGCAAAGAGGGCAGG+GGG | 0.408776 | 7_4:-46835386 | Msa1157800:CDS |
| TGCAATGGAGGAGGATGAAC+AGG | 0.420285 | 7_4:-46834647 | Msa1157800:CDS |
| GAGATAAATGAAGATGGAAT+CGG | 0.420742 | 7_4:-46835345 | Msa1157800:CDS |
| TAGGGTTTAGGTTCGGAATC+GGG | 0.420901 | 7_4:+46836562 | None:intergenic |
| CTGTGTAGCATGTTTGGAAT+AGG | 0.422588 | 7_4:-46834540 | Msa1157800:exon |
| ACATCACCAGATTTCTTCTT+CGG | 0.424129 | 7_4:+46834775 | None:intergenic |
| GGCTCTTGGCAAAGAGGGCA+GGG | 0.430694 | 7_4:-46835388 | Msa1157800:CDS |
| TAACGGAGGCAGGCAAGCTA+TGG | 0.434562 | 7_4:+46834516 | None:intergenic |
| GGAGAGAATAAGCTTGAAGT+TGG | 0.439007 | 7_4:-46834745 | Msa1157800:CDS |
| TTTCTGAAAATTGAAGTGTA+AGG | 0.439939 | 7_4:+46836786 | None:intergenic |
| GTTCGAGCTGAGAGAGCCTT+CGG | 0.440856 | 7_4:-46836667 | Msa1157800:CDS |
| TACACCCTTTCACACATTTG+TGG | 0.443402 | 7_4:-46834346 | Msa1157800:three_prime_UTR |
| TTTATACCGAAGAAGAAATC+TGG | 0.445367 | 7_4:-46834781 | Msa1157800:CDS |
| AGAGAGGCGGAAGAAGGAAT+TGG | 0.449764 | 7_4:+46836637 | None:intergenic |
| AGGTAAAGGAAGGAACTTAT+TGG | 0.456749 | 7_4:+46836827 | None:intergenic |
| TTACTCTTCAAAATTGACTT+GGG | 0.458046 | 7_4:+46835159 | None:intergenic |
| GGAGGATCATTATGACAAAC+AGG | 0.458179 | 7_4:-46835409 | Msa1157800:CDS |
| ATTGAAGTGTAAGGGTATAA+GGG | 0.458238 | 7_4:+46836795 | None:intergenic |
| GAAGAAAACCGACGAGGACT+TGG | 0.459863 | 7_4:-46834572 | Msa1157800:CDS |
| AACTTACTATGTGGTGCCAC+TGG | 0.466588 | 7_4:-46834464 | Msa1157800:three_prime_UTR |
| GCTCTTGGCAAAGAGGGCAG+GGG | 0.470014 | 7_4:-46835387 | Msa1157800:CDS |
| ATCAAACATAATAATTTGAG+TGG | 0.470697 | 7_4:-46834236 | Msa1157800:three_prime_UTR |
| AGATAAATGAAGATGGAATC+GGG | 0.470704 | 7_4:-46835344 | Msa1157800:CDS |
| TGGGAAATTAGGTCTTCTAT+TGG | 0.477993 | 7_4:-46836409 | Msa1157800:CDS |
| AGAAGAAGAAGAAGTAGGGT+AGG | 0.481258 | 7_4:+46836543 | None:intergenic |
| GACCAAAGAGAGGCGGAAGA+AGG | 0.495545 | 7_4:+46836631 | None:intergenic |
| ATCACAGGCAGATGAAGCTT+TGG | 0.495942 | 7_4:-46834824 | Msa1157800:CDS |
| ATCATGTGCCTGGATTTGTC+TGG | 0.497841 | 7_4:-46834317 | Msa1157800:three_prime_UTR |
| CATTATGACAAACAGGCTCT+TGG | 0.497963 | 7_4:-46835402 | Msa1157800:CDS |
| TTCTGAAAATTGAAGTGTAA+GGG | 0.498764 | 7_4:+46836787 | None:intergenic |
| TTTACTCTTCAAAATTGACT+TGG | 0.500079 | 7_4:+46835158 | None:intergenic |
| GCATCACCACCACCGACGTC+TGG | 0.501233 | 7_4:+46835189 | None:intergenic |
| TGATTTGAAGTCTACACTAC+AGG | 0.503366 | 7_4:+46834263 | None:intergenic |
| AAGGGTAAAGGTAAAGGTAA+AGG | 0.504566 | 7_4:+46836813 | None:intergenic |
| AAGCTAAAGCTTGGAAATGA+AGG | 0.504758 | 7_4:+46834438 | None:intergenic |
| CAAGGGAGTCTAACGGAGGC+AGG | 0.507713 | 7_4:+46834506 | None:intergenic |
| GAATAAGCTTGAAGTTGGAA+AGG | 0.511820 | 7_4:-46834740 | Msa1157800:CDS |
| CTAGGCCCAATAAACGTGTT+CGG | 0.516488 | 7_4:-46835119 | Msa1157800:CDS |
| AGAAGTTGAACCGCAAGTAC+AGG | 0.519023 | 7_4:-46834594 | Msa1157800:CDS |
| TAACTTTCCCAGACAAATCC+AGG | 0.519948 | 7_4:+46834309 | None:intergenic |
| AGCTGCATCCTCTTCCATTG+AGG | 0.521556 | 7_4:+46835014 | None:intergenic |
| AAGATAATCCTTCAGAGTCT+AGG | 0.526294 | 7_4:-46835137 | Msa1157800:CDS |
| AGGATGAGAAGGAAGGAACC+AGG | 0.526315 | 7_4:-46835056 | Msa1157800:CDS |
| TGCTAGGATTAAGTTGAAGC+AGG | 0.527169 | 7_4:-46835265 | Msa1157800:CDS |
| GGGTATAAGGGTAAAGGTAA+AGG | 0.528963 | 7_4:+46836807 | None:intergenic |
| GTGGAAAGACATCATGTGCC+TGG | 0.529409 | 7_4:-46834327 | Msa1157800:three_prime_UTR |
| AAAAGGTTCAAATGCATCAC+AGG | 0.530303 | 7_4:-46834839 | Msa1157800:CDS |
| ATGAGGGAGATAAATGAAGA+TGG | 0.530531 | 7_4:-46835351 | Msa1157800:CDS |
| GGTCTTCATTCGAACATCCC+TGG | 0.538346 | 7_4:+46835038 | None:intergenic |
| GTGTAAGGGTATAAGGGTAA+AGG | 0.539705 | 7_4:+46836801 | None:intergenic |
| GTGCCATTGCATACCATAGT+TGG | 0.540052 | 7_4:-46834160 | Msa1157800:three_prime_UTR |
| GAAGACCTCCTCAATGGAAG+AGG | 0.542891 | 7_4:-46835022 | Msa1157800:CDS |
| TCGAATGAAGACCTCCTCAA+TGG | 0.542894 | 7_4:-46835028 | Msa1157800:CDS |
| AAATGTGTGAAAGGGTGTAT+TGG | 0.546808 | 7_4:+46834350 | None:intergenic |
| TCTTGGCAAAGAGGGCAGGG+GGG | 0.547481 | 7_4:-46835385 | Msa1157800:CDS |
| GAAAACCGACGAGGACTTGG+AGG | 0.553003 | 7_4:-46834569 | Msa1157800:CDS |
| AAATCAGCCATCAAAGTCAC+AGG | 0.553173 | 7_4:-46834989 | Msa1157800:CDS |
| GTAAAGGTAAAGGTAAAGGA+AGG | 0.554232 | 7_4:+46836817 | None:intergenic |
| TTCGGTATAAAGGTAACAGA+TGG | 0.555047 | 7_4:+46834793 | None:intergenic |
| GAAGAAGAAGAAGTAGGGTA+GGG | 0.556342 | 7_4:+46836544 | None:intergenic |
| AAATTATGTAAGCTAAAGCT+TGG | 0.560413 | 7_4:+46834429 | None:intergenic |
| AAACAGGCTCTTGGCAAAGA+GGG | 0.560590 | 7_4:-46835393 | Msa1157800:CDS |
| AGTAGGGTAGGGTTTAGGTT+CGG | 0.561424 | 7_4:+46836555 | None:intergenic |
| CGATTACAATGATGAACAGT+GGG | 0.564558 | 7_4:-46836428 | Msa1157800:CDS |
| AACTCTGAAACTATCTTCCA+TGG | 0.565209 | 7_4:+46836687 | None:intergenic |
| AACGGAGGCAGGCAAGCTAT+GGG | 0.568439 | 7_4:+46834517 | None:intergenic |
| AAATGACGATGAGGATGAGA+AGG | 0.570275 | 7_4:-46835067 | Msa1157800:CDS |
| TCTTTCCACAAATGTGTGAA+AGG | 0.570740 | 7_4:+46834341 | None:intergenic |
| CTGTTCATCATTGTAATCGG+AGG | 0.571258 | 7_4:+46836432 | None:intergenic |
| TCTGAATGTGACGATAAAGA+TGG | 0.574709 | 7_4:-46835090 | Msa1157800:CDS |
| TCACTTTATGCAGGATGAGG+AGG | 0.583527 | 7_4:-46835427 | Msa1157800:intron |
| TCAAACATAATAATTTGAGT+GGG | 0.584246 | 7_4:-46834235 | Msa1157800:three_prime_UTR |
| CAAAATCGAGGGTGCAATCG+AGG | 0.584390 | 7_4:+46836386 | None:intergenic |
| AAATCTGGTGATGTCACTAT+GGG | 0.584932 | 7_4:-46834766 | Msa1157800:CDS |
| CATCGGCAGCTATGCTAACA+GGG | 0.589427 | 7_4:+46834695 | None:intergenic |
| TTATTGGGCCTAGACTCTGA+AGG | 0.592184 | 7_4:+46835129 | None:intergenic |
| GAAGAAGATGAAAACGCTGC+GGG | 0.592652 | 7_4:-46836466 | Msa1157800:CDS |
| CAAACTACACATTGGAGACA+AGG | 0.593156 | 7_4:+46834488 | None:intergenic |
| CAAACAGGCTCTTGGCAAAG+AGG | 0.593885 | 7_4:-46835394 | Msa1157800:CDS |
| GGCAGCTATGCTAACAGGGA+AGG | 0.594716 | 7_4:+46834699 | None:intergenic |
| TGTTCATCATTGTAATCGGA+GGG | 0.595003 | 7_4:+46836433 | None:intergenic |
| TGCATCCTCTTCCATTGAGG+AGG | 0.595415 | 7_4:+46835017 | None:intergenic |
| TACTCTTCAAAATTGACTTG+GGG | 0.595453 | 7_4:+46835160 | None:intergenic |
| CCTACACCAGACGTCGGTGG+TGG | 0.598318 | 7_4:-46835195 | Msa1157800:CDS |
| GGGCTAATCATACCGCTGCT+AGG | 0.601553 | 7_4:-46835281 | Msa1157800:CDS |
| CTTTCCACAAATGTGTGAAA+GGG | 0.608159 | 7_4:+46834342 | None:intergenic |
| CAGCGGTATGATTAGCCCGT+GGG | 0.608205 | 7_4:+46835286 | None:intergenic |
| ACCAAGAATTGAATCAACCA+TGG | 0.615154 | 7_4:-46836704 | Msa1157800:exon |
| TCATGTGCCTGGATTTGTCT+GGG | 0.615655 | 7_4:-46834316 | Msa1157800:three_prime_UTR |
| GGATTTGATCCCTATATAGT+CGG | 0.616560 | 7_4:-46836885 | Msa1157800:five_prime_UTR |
| GACGATGAGGATGAGAAGGA+AGG | 0.618740 | 7_4:-46835063 | Msa1157800:CDS |
| AGGAATTGGAAGAGAACCGA+AGG | 0.619269 | 7_4:+46836651 | None:intergenic |
| TGATGTATGTGCAATGGAGG+AGG | 0.619859 | 7_4:-46834656 | Msa1157800:CDS |
| AGGCTCCTCCAAGTCCTCGT+CGG | 0.620365 | 7_4:+46834564 | None:intergenic |
| GCAGCGGTATGATTAGCCCG+TGG | 0.621262 | 7_4:+46835285 | None:intergenic |
| TTGCCAACTATGGTATGCAA+TGG | 0.623950 | 7_4:+46834157 | None:intergenic |
| CCACCACCGACGTCTGGTGT+AGG | 0.628069 | 7_4:+46835195 | None:intergenic |
| AAAAGGTACCTCAAAATCGA+GGG | 0.631629 | 7_4:+46836375 | None:intergenic |
| CAAACATAATAATTTGAGTG+GGG | 0.632845 | 7_4:-46834234 | Msa1157800:three_prime_UTR |
| GTATAAAGGTAACAGATGGA+AGG | 0.634228 | 7_4:+46834797 | None:intergenic |
| AAGCTCAACTTTGAAACCGG+AGG | 0.634277 | 7_4:+46836519 | None:intergenic |
| TTCGGAGAGAGACCAAAGAG+AGG | 0.642699 | 7_4:+46836621 | None:intergenic |
| AGTCCAATTCAAGAGTCTCT+CGG | 0.642854 | 7_4:+46836853 | None:intergenic |
| CAGTGATGTATGTGCAATGG+AGG | 0.643095 | 7_4:-46834659 | Msa1157800:CDS |
| GGATGAACAGGAAGTTATCG+AGG | 0.649044 | 7_4:-46834635 | Msa1157800:CDS |
| GTAAGTTGCAAACTACACAT+TGG | 0.650077 | 7_4:+46834480 | None:intergenic |
| AAACAGTGATGTATGTGCAA+TGG | 0.651519 | 7_4:-46834662 | Msa1157800:CDS |
| TTCCAAACATGCTACACAGT+AGG | 0.652049 | 7_4:+46834544 | None:intergenic |
| GGATGAGAAGGAAGGAACCA+GGG | 0.660887 | 7_4:-46835055 | Msa1157800:CDS |
| CCGATTACAATGATGAACAG+TGG | 0.663245 | 7_4:-46836429 | Msa1157800:CDS |
| GTAGTTTGCAACTTACTATG+TGG | 0.664500 | 7_4:-46834473 | Msa1157800:three_prime_UTR |
| GGAGAGAGACCAAAGAGAGG+CGG | 0.670179 | 7_4:+46836624 | None:intergenic |
| TTGGAGACAAGGGAGTCTAA+CGG | 0.671112 | 7_4:+46834499 | None:intergenic |
| AAACTACACATTGGAGACAA+GGG | 0.682350 | 7_4:+46834489 | None:intergenic |
| TAAAGATGGAAATGACGATG+AGG | 0.682586 | 7_4:-46835076 | Msa1157800:CDS |
| AGAAGAAGATGAAAACGCTG+CGG | 0.684735 | 7_4:-46836467 | Msa1157800:CDS |
| GGATGACAAAGCAAATAAGG+AGG | 0.689367 | 7_4:-46834887 | Msa1157800:CDS |
| CTTCAACTTAATCCTAGCAG+CGG | 0.691169 | 7_4:+46835269 | None:intergenic |
| TTGGAAATGAAGGAAACCAG+TGG | 0.702744 | 7_4:+46834448 | None:intergenic |
| AAACCTACACCAGACGTCGG+TGG | 0.708641 | 7_4:-46835198 | Msa1157800:CDS |
| GAGACAAGGGAGTCTAACGG+AGG | 0.737301 | 7_4:+46834502 | None:intergenic |
| GAGAAACCTACACCAGACGT+CGG | 0.745038 | 7_4:-46835201 | Msa1157800:CDS |
| GTACAGGAAGAAAACCGACG+AGG | 0.795841 | 7_4:-46834578 | Msa1157800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAATTAAAAAGAATGAAT+GGG | + | chr7_4:46834252-46834271 | None:intergenic | 15.0% |
| !!! | TTTGTTCTTTAATTTGTATT+TGG | - | chr7_4:46834735-46834754 | Msa1157800:CDS | 15.0% |
| !! | TGTAATCAAATAAACAAAAT+TGG | + | chr7_4:46834761-46834780 | None:intergenic | 15.0% |
| !! | TGAAGTAATAATAAAGATTA+TGG | - | chr7_4:46834874-46834893 | Msa1157800:CDS | 15.0% |
| !! | CAAGAATTAAAAAGAATGAA+TGG | + | chr7_4:46834253-46834272 | None:intergenic | 20.0% |
| !! | AAAGGGATAAAAGAAAAAAA+AGG | + | chr7_4:46834638-46834657 | None:intergenic | 20.0% |
| !! | ATTAATGAGAATGATGAAAA+GGG | + | chr7_4:46834655-46834674 | None:intergenic | 20.0% |
| !! | AATTAATGAGAATGATGAAA+AGG | + | chr7_4:46834656-46834675 | None:intergenic | 20.0% |
| !!! | AAAATGCTATCTTTTAACAT+TGG | - | chr7_4:46834703-46834722 | Msa1157800:CDS | 20.0% |
| !! | ACATGTAAAAAATTGAATCT+AGG | + | chr7_4:46834787-46834806 | None:intergenic | 20.0% |
| !! | TAACTTATTAAAACAGCTTA+AGG | + | chr7_4:46835135-46835154 | None:intergenic | 20.0% |
| !!! | AATTTTGATTGCACTAATAA+GGG | + | chr7_4:46835222-46835241 | None:intergenic | 20.0% |
| !!! | AAATTTTGATTGCACTAATA+AGG | + | chr7_4:46835223-46835242 | None:intergenic | 20.0% |
| !! | AAGTAAAATGTTGAATTTAG+AGG | + | chr7_4:46835261-46835280 | None:intergenic | 20.0% |
| !!! | AATTCAACATTTTACTTTAG+AGG | - | chr7_4:46835264-46835283 | Msa1157800:CDS | 20.0% |
| !!! | ATTCAACATTTTACTTTAGA+GGG | - | chr7_4:46835265-46835284 | Msa1157800:CDS | 20.0% |
| !! | AGTATACAAGATATAAAGTT+AGG | - | chr7_4:46835346-46835365 | Msa1157800:CDS | 20.0% |
| !! | ATCAAACATAATAATTTGAG+TGG | - | chr7_4:46836757-46836776 | Msa1157800:five_prime_UTR | 20.0% |
| !! | TCAAACATAATAATTTGAGT+GGG | - | chr7_4:46836758-46836777 | Msa1157800:five_prime_UTR | 20.0% |
| !! | TTCTGAAAATTGAAGTGTAA+GGG | + | chr7_4:46834209-46834228 | None:intergenic | 25.0% |
| !! | TTTCTGAAAATTGAAGTGTA+AGG | + | chr7_4:46834210-46834229 | None:intergenic | 25.0% |
| ! | ATGTTAAAGTTCATAAGAAG+AGG | - | chr7_4:46834803-46834822 | Msa1157800:CDS | 25.0% |
| ! | ACGTAACTTATAATGATAAG+TGG | + | chr7_4:46834982-46835001 | None:intergenic | 25.0% |
| ! | TATACTAATCACAGATTTGT+TGG | + | chr7_4:46835332-46835351 | None:intergenic | 25.0% |
| !! | AGATATAAAGTTAGGTTTTC+TGG | - | chr7_4:46835354-46835373 | Msa1157800:CDS | 25.0% |
| !! | ATGCAAAGTATCAATTTGAT+TGG | + | chr7_4:46835766-46835785 | None:intergenic | 25.0% |
| !! | TTACTCTTCAAAATTGACTT+GGG | + | chr7_4:46835837-46835856 | None:intergenic | 25.0% |
| ! | TTTACTCTTCAAAATTGACT+TGG | + | chr7_4:46835838-46835857 | None:intergenic | 25.0% |
| !!! | GTATAATGTGTGTATTTTGA+AGG | + | chr7_4:46836065-46836084 | None:intergenic | 25.0% |
| ! | AAATTATGTAAGCTAAAGCT+TGG | + | chr7_4:46836567-46836586 | None:intergenic | 25.0% |
| !! | TGTTTCTTTTCTTTCAAACT+TGG | - | chr7_4:46836611-46836630 | Msa1157800:CDS | 25.0% |
| !! | GTTTCTTTTCTTTCAAACTT+GGG | - | chr7_4:46836612-46836631 | Msa1157800:CDS | 25.0% |
| !! | TTTCTTTTCTTTCAAACTTG+GGG | - | chr7_4:46836613-46836632 | Msa1157800:CDS | 25.0% |
| ! | CAAACATAATAATTTGAGTG+GGG | - | chr7_4:46836759-46836778 | Msa1157800:five_prime_UTR | 25.0% |
| AAGATTTAGCCGACTATATA+GGG | + | chr7_4:46834120-46834139 | None:intergenic | 30.0% | |
| ! | ATTGAAGTGTAAGGGTATAA+GGG | + | chr7_4:46834201-46834220 | None:intergenic | 30.0% |
| ! | AATTGAAGTGTAAGGGTATA+AGG | + | chr7_4:46834202-46834221 | None:intergenic | 30.0% |
| ATACCCTGAAAGTAAATTTC+AGG | - | chr7_4:46834830-46834849 | Msa1157800:CDS | 30.0% | |
| TACCCTGAAAGTAAATTTCA+GGG | - | chr7_4:46834831-46834850 | Msa1157800:CDS | 30.0% | |
| GAGATAAATGAAGATGGAAT+CGG | - | chr7_4:46835648-46835667 | Msa1157800:intron | 30.0% | |
| AGATAAATGAAGATGGAATC+GGG | - | chr7_4:46835649-46835668 | Msa1157800:intron | 30.0% | |
| !! | TACTCTTCAAAATTGACTTG+GGG | + | chr7_4:46835836-46835855 | None:intergenic | 30.0% |
| !! | TTTTGATTCTTCAACTGACA+TGG | - | chr7_4:46836085-46836104 | Msa1157800:intron | 30.0% |
| AGATTTCTTCTTCGGTATAA+AGG | + | chr7_4:46836213-46836232 | None:intergenic | 30.0% | |
| TTTATACCGAAGAAGAAATC+TGG | - | chr7_4:46836212-46836231 | Msa1157800:intron | 30.0% | |
| GGATTTGATCCCTATATAGT+CGG | - | chr7_4:46834108-46834127 | Msa1157800:three_prime_UTR | 35.0% | |
| GAAGATTTAGCCGACTATAT+AGG | + | chr7_4:46834121-46834140 | None:intergenic | 35.0% | |
| AGGTAAAGGAAGGAACTTAT+TGG | + | chr7_4:46834169-46834188 | None:intergenic | 35.0% | |
| GTAAAGGTAAAGGTAAAGGA+AGG | + | chr7_4:46834179-46834198 | None:intergenic | 35.0% | |
| AAGGGTAAAGGTAAAGGTAA+AGG | + | chr7_4:46834183-46834202 | None:intergenic | 35.0% | |
| ACCAAGAATTGAATCAACCA+TGG | - | chr7_4:46834289-46834308 | Msa1157800:three_prime_UTR | 35.0% | |
| ! | TCCATGGTTGATTCAATTCT+TGG | + | chr7_4:46834293-46834312 | None:intergenic | 35.0% |
| !! | AACTCTGAAACTATCTTCCA+TGG | + | chr7_4:46834309-46834328 | None:intergenic | 35.0% |
| AGGAAGAAGAAGAAGAAGTA+GGG | + | chr7_4:46834457-46834476 | None:intergenic | 35.0% | |
| TGTTCATCATTGTAATCGGA+GGG | + | chr7_4:46834563-46834582 | None:intergenic | 35.0% | |
| CCACTGTTCATCATTGTAAT+CGG | + | chr7_4:46834567-46834586 | None:intergenic | 35.0% | |
| CGATTACAATGATGAACAGT+GGG | - | chr7_4:46834565-46834584 | Msa1157800:CDS | 35.0% | |
| ATGATGAACAGTGGGAAATT+AGG | - | chr7_4:46834573-46834592 | Msa1157800:CDS | 35.0% | |
| TGGGAAATTAGGTCTTCTAT+TGG | - | chr7_4:46834584-46834603 | Msa1157800:CDS | 35.0% | |
| !! | AAAAGGTACCTCAAAATCGA+GGG | + | chr7_4:46834621-46834640 | None:intergenic | 35.0% |
| !! | AAAAAGGTACCTCAAAATCG+AGG | + | chr7_4:46834622-46834641 | None:intergenic | 35.0% |
| CACCCTGAAATTTACTTTCA+GGG | + | chr7_4:46834836-46834855 | None:intergenic | 35.0% | |
| ACACCCTGAAATTTACTTTC+AGG | + | chr7_4:46834837-46834856 | None:intergenic | 35.0% | |
| TTTCAGGGTGTATCTATTGT+AGG | - | chr7_4:46834846-46834865 | Msa1157800:CDS | 35.0% | |
| TTCAGGGTGTATCTATTGTA+GGG | - | chr7_4:46834847-46834866 | Msa1157800:CDS | 35.0% | |
| !! | GCTGTTTTCATAAGCTATCT+TGG | - | chr7_4:46835068-46835087 | Msa1157800:CDS | 35.0% |
| AAGCTATCTTGGTGAACTTA+TGG | - | chr7_4:46835079-46835098 | Msa1157800:CDS | 35.0% | |
| !! | TGCAATCAAAATTTGCTACG+AGG | - | chr7_4:46835229-46835248 | Msa1157800:CDS | 35.0% |
| AAAGCAACCAAAAACGAGAA+GGG | + | chr7_4:46835442-46835461 | None:intergenic | 35.0% | |
| TTGACTGAATCACTTTATGC+AGG | - | chr7_4:46835557-46835576 | Msa1157800:intron | 35.0% | |
| ATGAGGGAGATAAATGAAGA+TGG | - | chr7_4:46835642-46835661 | Msa1157800:intron | 35.0% | |
| AAGATAATCCTTCAGAGTCT+AGG | - | chr7_4:46835856-46835875 | Msa1157800:intron | 35.0% | |
| TCAAACCGAACACGTTTATT+GGG | + | chr7_4:46835882-46835901 | None:intergenic | 35.0% | |
| ATCAAACCGAACACGTTTAT+TGG | + | chr7_4:46835883-46835902 | None:intergenic | 35.0% | |
| TCTGAATGTGACGATAAAGA+TGG | - | chr7_4:46835903-46835922 | Msa1157800:intron | 35.0% | |
| TAAAGATGGAAATGACGATG+AGG | - | chr7_4:46835917-46835936 | Msa1157800:intron | 35.0% | |
| GAAGGATTGCGAATATAATC+AGG | + | chr7_4:46836047-46836066 | None:intergenic | 35.0% | |
| CATGGATGACAAAGCAAATA+AGG | - | chr7_4:46836103-46836122 | Msa1157800:intron | 35.0% | |
| AGTTTCCTTGCACAGATAAA+AGG | - | chr7_4:46836137-46836156 | Msa1157800:intron | 35.0% | |
| ! | TTGAACCTTTTATCTGTGCA+AGG | + | chr7_4:46836145-46836164 | None:intergenic | 35.0% |
| AAAAGGTTCAAATGCATCAC+AGG | - | chr7_4:46836154-46836173 | Msa1157800:intron | 35.0% | |
| GTATAAAGGTAACAGATGGA+AGG | + | chr7_4:46836199-46836218 | None:intergenic | 35.0% | |
| TTCGGTATAAAGGTAACAGA+TGG | + | chr7_4:46836203-46836222 | None:intergenic | 35.0% | |
| ACATCACCAGATTTCTTCTT+CGG | + | chr7_4:46836221-46836240 | None:intergenic | 35.0% | |
| ! | AAATCTGGTGATGTCACTAT+GGG | - | chr7_4:46836227-46836246 | Msa1157800:intron | 35.0% |
| GAATAAGCTTGAAGTTGGAA+AGG | - | chr7_4:46836253-46836272 | Msa1157800:intron | 35.0% | |
| ! | ACTGTTTTCAGTGTCATCAT+CGG | + | chr7_4:46836318-46836337 | None:intergenic | 35.0% |
| AAACAGTGATGTATGTGCAA+TGG | - | chr7_4:46836331-46836350 | Msa1157800:intron | 35.0% | |
| AAACTACACATTGGAGACAA+GGG | + | chr7_4:46836507-46836526 | None:intergenic | 35.0% | |
| GTAAGTTGCAAACTACACAT+TGG | + | chr7_4:46836516-46836535 | None:intergenic | 35.0% | |
| ! | GTAGTTTGCAACTTACTATG+TGG | - | chr7_4:46836520-46836539 | Msa1157800:CDS | 35.0% |
| AAGCTAAAGCTTGGAAATGA+AGG | + | chr7_4:46836558-46836577 | None:intergenic | 35.0% | |
| ! | AAATGTGTGAAAGGGTGTAT+TGG | + | chr7_4:46836646-46836665 | None:intergenic | 35.0% |
| CTTTCCACAAATGTGTGAAA+GGG | + | chr7_4:46836654-46836673 | None:intergenic | 35.0% | |
| TCTTTCCACAAATGTGTGAA+AGG | + | chr7_4:46836655-46836674 | None:intergenic | 35.0% | |
| ! | TGATTTGAAGTCTACACTAC+AGG | + | chr7_4:46836733-46836752 | None:intergenic | 35.0% |
| TCATAGTGCAGTACAGAAAA+AGG | + | chr7_4:46836862-46836881 | None:intergenic | 35.0% | |
| AGTCCAATTCAAGAGTCTCT+CGG | + | chr7_4:46834143-46834162 | None:intergenic | 40.0% | |
| GGGTATAAGGGTAAAGGTAA+AGG | + | chr7_4:46834189-46834208 | None:intergenic | 40.0% | |
| ! | GTGTAAGGGTATAAGGGTAA+AGG | + | chr7_4:46834195-46834214 | None:intergenic | 40.0% |
| ! | TTCGGGTTTGATTTCGTCTT+CGG | + | chr7_4:46834393-46834412 | None:intergenic | 40.0% |
| GAAGAAGAAGAAGTAGGGTA+GGG | + | chr7_4:46834452-46834471 | None:intergenic | 40.0% | |
| AGAAGAAGAAGAAGTAGGGT+AGG | + | chr7_4:46834453-46834472 | None:intergenic | 40.0% | |
| GAGGAAGAAGAAGAAGAAGT+AGG | + | chr7_4:46834458-46834477 | None:intergenic | 40.0% | |
| ACTTCTTCTTCTTCTTCCTC+CGG | - | chr7_4:46834458-46834477 | Msa1157800:three_prime_UTR | 40.0% | |
| !! | CTCAAGCTCAACTTTGAAAC+CGG | + | chr7_4:46834480-46834499 | None:intergenic | 40.0% |
| AGAAGAAGATGAAAACGCTG+CGG | - | chr7_4:46834526-46834545 | Msa1157800:three_prime_UTR | 40.0% | |
| TTGTAATCGGAGGGTTTAGA+TGG | + | chr7_4:46834554-46834573 | None:intergenic | 40.0% | |
| CTGTTCATCATTGTAATCGG+AGG | + | chr7_4:46834564-46834583 | None:intergenic | 40.0% | |
| CCGATTACAATGATGAACAG+TGG | - | chr7_4:46834564-46834583 | Msa1157800:CDS | 40.0% | |
| TCAGGGTGTATCTATTGTAG+GGG | - | chr7_4:46834848-46834867 | Msa1157800:CDS | 40.0% | |
| CAAGTAAGCCAATTCAAGAC+AGG | - | chr7_4:46835196-46835215 | Msa1157800:CDS | 40.0% | |
| AATAAGGGCCTGTCTTGAAT+TGG | + | chr7_4:46835207-46835226 | None:intergenic | 40.0% | |
| ! | AGCTAAACCCTTCTCGTTTT+TGG | - | chr7_4:46835432-46835451 | Msa1157800:intron | 40.0% |
| CAAAGCAACCAAAAACGAGA+AGG | + | chr7_4:46835443-46835462 | None:intergenic | 40.0% | |
| GAATCACTTTATGCAGGATG+AGG | - | chr7_4:46835563-46835582 | Msa1157800:intron | 40.0% | |
| GGAGGATCATTATGACAAAC+AGG | - | chr7_4:46835584-46835603 | Msa1157800:intron | 40.0% | |
| CATTATGACAAACAGGCTCT+TGG | - | chr7_4:46835591-46835610 | Msa1157800:intron | 40.0% | |
| !!! | GAGATTTTTCAAGAGACCCA+CGG | - | chr7_4:46835691-46835710 | Msa1157800:intron | 40.0% |
| !!! | AGATTTTTCAAGAGACCCAC+GGG | - | chr7_4:46835692-46835711 | Msa1157800:intron | 40.0% |
| CTTCAACTTAATCCTAGCAG+CGG | + | chr7_4:46835727-46835746 | None:intergenic | 40.0% | |
| !! | TGCTAGGATTAAGTTGAAGC+AGG | - | chr7_4:46835728-46835747 | Msa1157800:intron | 40.0% |
| AAATGACGATGAGGATGAGA+AGG | - | chr7_4:46835926-46835945 | Msa1157800:intron | 40.0% | |
| AAATCAGCCATCAAAGTCAC+AGG | - | chr7_4:46836004-46836023 | Msa1157800:intron | 40.0% | |
| GCAAATTCCTGTGACTTTGA+TGG | + | chr7_4:46836014-46836033 | None:intergenic | 40.0% | |
| GGATGACAAAGCAAATAAGG+AGG | - | chr7_4:46836106-46836125 | Msa1157800:intron | 40.0% | |
| ! | GAAATCTGGTGATGTCACTA+TGG | - | chr7_4:46836226-46836245 | Msa1157800:intron | 40.0% |
| GGAGAGAATAAGCTTGAAGT+TGG | - | chr7_4:46836248-46836267 | Msa1157800:intron | 40.0% | |
| TTCCAAACATGCTACACAGT+AGG | + | chr7_4:46836452-46836471 | None:intergenic | 40.0% | |
| ! | CTGTGTAGCATGTTTGGAAT+AGG | - | chr7_4:46836453-46836472 | Msa1157800:CDS | 40.0% |
| CAAACTACACATTGGAGACA+AGG | + | chr7_4:46836508-46836527 | None:intergenic | 40.0% | |
| TTGGAAATGAAGGAAACCAG+TGG | + | chr7_4:46836548-46836567 | None:intergenic | 40.0% | |
| TTCTTTCAAACTTGGGGTCT+TGG | - | chr7_4:46836619-46836638 | Msa1157800:CDS | 40.0% | |
| TCTTTCAAACTTGGGGTCTT+GGG | - | chr7_4:46836620-46836639 | Msa1157800:CDS | 40.0% | |
| TACACCCTTTCACACATTTG+TGG | - | chr7_4:46836647-46836666 | Msa1157800:CDS | 40.0% | |
| TAACTTTCCCAGACAAATCC+AGG | + | chr7_4:46836687-46836706 | None:intergenic | 40.0% | |
| TTGCCAACTATGGTATGCAA+TGG | + | chr7_4:46836839-46836858 | None:intergenic | 40.0% | |
| CAGAAAAAGGTTGCCAACTA+TGG | + | chr7_4:46836849-46836868 | None:intergenic | 40.0% | |
| CTTCCGAGAGACTCTTGAAT+TGG | - | chr7_4:46834137-46834156 | Msa1157800:three_prime_UTR | 45.0% | |
| AGGAATTGGAAGAGAACCGA+AGG | + | chr7_4:46834345-46834364 | None:intergenic | 45.0% | |
| ! | TTTGGGTTTGGGTTTGGGTT+CGG | + | chr7_4:46834411-46834430 | None:intergenic | 45.0% |
| TTAGGTTCGGAATCGGGTTT+GGG | + | chr7_4:46834428-46834447 | None:intergenic | 45.0% | |
| ! | TTTAGGTTCGGAATCGGGTT+TGG | + | chr7_4:46834429-46834448 | None:intergenic | 45.0% |
| ! | TAGGGTTTAGGTTCGGAATC+GGG | + | chr7_4:46834434-46834453 | None:intergenic | 45.0% |
| ! | GTAGGGTTTAGGTTCGGAAT+CGG | + | chr7_4:46834435-46834454 | None:intergenic | 45.0% |
| ! | AGTAGGGTAGGGTTTAGGTT+CGG | + | chr7_4:46834441-46834460 | None:intergenic | 45.0% |
| GAAGAAGTAGGGTAGGGTTT+AGG | + | chr7_4:46834446-46834465 | None:intergenic | 45.0% | |
| !! | AAGCTCAACTTTGAAACCGG+AGG | + | chr7_4:46834477-46834496 | None:intergenic | 45.0% |
| GAAGAAGATGAAAACGCTGC+GGG | - | chr7_4:46834527-46834546 | Msa1157800:three_prime_UTR | 45.0% | |
| GAACCAGCTTCACTCAACTT+AGG | - | chr7_4:46834914-46834933 | Msa1157800:CDS | 45.0% | |
| CACTCAACTTAGGCTCTGTT+TGG | - | chr7_4:46834924-46834943 | Msa1157800:CDS | 45.0% | |
| TCACTTTATGCAGGATGAGG+AGG | - | chr7_4:46835566-46835585 | Msa1157800:intron | 45.0% | |
| AAACAGGCTCTTGGCAAAGA+GGG | - | chr7_4:46835600-46835619 | Msa1157800:intron | 45.0% | |
| GGGGGATCGTTTGTATATGA+GGG | - | chr7_4:46835626-46835645 | Msa1157800:intron | 45.0% | |
| TTATTGGGCCTAGACTCTGA+AGG | + | chr7_4:46835867-46835886 | None:intergenic | 45.0% | |
| CTAGGCCCAATAAACGTGTT+CGG | - | chr7_4:46835874-46835893 | Msa1157800:intron | 45.0% | |
| TCGAATGAAGACCTCCTCAA+TGG | - | chr7_4:46835965-46835984 | Msa1157800:intron | 45.0% | |
| ATCACAGGCAGATGAAGCTT+TGG | - | chr7_4:46836169-46836188 | Msa1157800:intron | 45.0% | |
| CAGTGATGTATGTGCAATGG+AGG | - | chr7_4:46836334-46836353 | Msa1157800:intron | 45.0% | |
| TGATGTATGTGCAATGGAGG+AGG | - | chr7_4:46836337-46836356 | Msa1157800:intron | 45.0% | |
| GGATGAACAGGAAGTTATCG+AGG | - | chr7_4:46836358-46836377 | Msa1157800:intron | 45.0% | |
| AGAAGTTGAACCGCAAGTAC+AGG | - | chr7_4:46836399-46836418 | Msa1157800:CDS | 45.0% | |
| ! | CGGTTTTCTTCCTGTACTTG+CGG | + | chr7_4:46836412-46836431 | None:intergenic | 45.0% |
| AGCCTACTGTGTAGCATGTT+TGG | - | chr7_4:46836447-46836466 | Msa1157800:CDS | 45.0% | |
| TTGGAGACAAGGGAGTCTAA+CGG | + | chr7_4:46836497-46836516 | None:intergenic | 45.0% | |
| !! | AACTTACTATGTGGTGCCAC+TGG | - | chr7_4:46836529-46836548 | Msa1157800:CDS | 45.0% |
| ATCATGTGCCTGGATTTGTC+TGG | - | chr7_4:46836676-46836695 | Msa1157800:CDS | 45.0% | |
| TCATGTGCCTGGATTTGTCT+GGG | - | chr7_4:46836677-46836696 | Msa1157800:CDS | 45.0% | |
| ! | GTGCCATTGCATACCATAGT+TGG | - | chr7_4:46836833-46836852 | Msa1157800:five_prime_UTR | 45.0% |
| AGAGAGGCGGAAGAAGGAAT+TGG | + | chr7_4:46834359-46834378 | None:intergenic | 50.0% | |
| TTCCTTCTTCCGCCTCTCTT+TGG | - | chr7_4:46834360-46834379 | Msa1157800:three_prime_UTR | 50.0% | |
| TTCGGAGAGAGACCAAAGAG+AGG | + | chr7_4:46834375-46834394 | None:intergenic | 50.0% | |
| ! | TTGGGTTTGGGTTTGGGTTC+GGG | + | chr7_4:46834410-46834429 | None:intergenic | 50.0% |
| ! | TCGGGTTTGGGTTTGGGTTT+GGG | + | chr7_4:46834416-46834435 | None:intergenic | 50.0% |
| ! | ATCGGGTTTGGGTTTGGGTT+TGG | + | chr7_4:46834417-46834436 | None:intergenic | 50.0% |
| ! | TCGGAATCGGGTTTGGGTTT+GGG | + | chr7_4:46834422-46834441 | None:intergenic | 50.0% |
| ! | TTCGGAATCGGGTTTGGGTT+TGG | + | chr7_4:46834423-46834442 | None:intergenic | 50.0% |
| ! | CAAAATCGAGGGTGCAATCG+AGG | + | chr7_4:46834610-46834629 | None:intergenic | 50.0% |
| ! | CGATTGCACCCTCGATTTTG+AGG | - | chr7_4:46834610-46834629 | Msa1157800:CDS | 50.0% |
| ! | GAGCCTAAGTTGAGTGAAGC+TGG | + | chr7_4:46834920-46834939 | None:intergenic | 50.0% |
| CAAACAGGCTCTTGGCAAAG+AGG | - | chr7_4:46835599-46835618 | Msa1157800:intron | 50.0% | |
| GGGGGGATCGTTTGTATATG+AGG | - | chr7_4:46835625-46835644 | Msa1157800:intron | 50.0% | |
| GGGATAAGTTCACGTGCGTT+TGG | - | chr7_4:46835669-46835688 | Msa1157800:intron | 50.0% | |
| GAGAAACCTACACCAGACGT+CGG | - | chr7_4:46835792-46835811 | Msa1157800:intron | 50.0% | |
| GACGATGAGGATGAGAAGGA+AGG | - | chr7_4:46835930-46835949 | Msa1157800:intron | 50.0% | |
| AGGATGAGAAGGAAGGAACC+AGG | - | chr7_4:46835937-46835956 | Msa1157800:intron | 50.0% | |
| GGATGAGAAGGAAGGAACCA+GGG | - | chr7_4:46835938-46835957 | Msa1157800:intron | 50.0% | |
| GGTCTTCATTCGAACATCCC+TGG | + | chr7_4:46835958-46835977 | None:intergenic | 50.0% | |
| GAAGACCTCCTCAATGGAAG+AGG | - | chr7_4:46835971-46835990 | Msa1157800:intron | 50.0% | |
| TGCATCCTCTTCCATTGAGG+AGG | + | chr7_4:46835979-46835998 | None:intergenic | 50.0% | |
| AGCTGCATCCTCTTCCATTG+AGG | + | chr7_4:46835982-46836001 | None:intergenic | 50.0% | |
| CATCGGCAGCTATGCTAACA+GGG | + | chr7_4:46836301-46836320 | None:intergenic | 50.0% | |
| TCATCGGCAGCTATGCTAAC+AGG | + | chr7_4:46836302-46836321 | None:intergenic | 50.0% | |
| TGCAATGGAGGAGGATGAAC+AGG | - | chr7_4:46836346-46836365 | Msa1157800:intron | 50.0% | |
| GTACAGGAAGAAAACCGACG+AGG | - | chr7_4:46836415-46836434 | Msa1157800:CDS | 50.0% | |
| GAAGAAAACCGACGAGGACT+TGG | - | chr7_4:46836421-46836440 | Msa1157800:CDS | 50.0% | |
| GTGGAAAGACATCATGTGCC+TGG | - | chr7_4:46836666-46836685 | Msa1157800:CDS | 50.0% | |
| GTTCGAGCTGAGAGAGCCTT+CGG | - | chr7_4:46834326-46834345 | Msa1157800:three_prime_UTR | 55.0% | |
| GACCAAAGAGAGGCGGAAGA+AGG | + | chr7_4:46834365-46834384 | None:intergenic | 55.0% | |
| GGAGAGAGACCAAAGAGAGG+CGG | + | chr7_4:46834372-46834391 | None:intergenic | 55.0% | |
| ! | CAGCGGTATGATTAGCCCGT+GGG | + | chr7_4:46835710-46835729 | None:intergenic | 55.0% |
| GGGCTAATCATACCGCTGCT+AGG | - | chr7_4:46835712-46835731 | Msa1157800:intron | 55.0% | |
| AAACCTACACCAGACGTCGG+TGG | - | chr7_4:46835795-46835814 | Msa1157800:intron | 55.0% | |
| GGCAGCTATGCTAACAGGGA+AGG | + | chr7_4:46836297-46836316 | None:intergenic | 55.0% | |
| GAAAACCGACGAGGACTTGG+AGG | - | chr7_4:46836424-46836443 | Msa1157800:CDS | 55.0% | |
| AACGGAGGCAGGCAAGCTAT+GGG | + | chr7_4:46836479-46836498 | None:intergenic | 55.0% | |
| TAACGGAGGCAGGCAAGCTA+TGG | + | chr7_4:46836480-46836499 | None:intergenic | 55.0% | |
| GAGACAAGGGAGTCTAACGG+AGG | + | chr7_4:46836494-46836513 | None:intergenic | 55.0% | |
| AGGCTCTTGGCAAAGAGGGC+AGG | - | chr7_4:46835604-46835623 | Msa1157800:intron | 60.0% | |
| GGCTCTTGGCAAAGAGGGCA+GGG | - | chr7_4:46835605-46835624 | Msa1157800:intron | 60.0% | |
| GCTCTTGGCAAAGAGGGCAG+GGG | - | chr7_4:46835606-46835625 | Msa1157800:intron | 60.0% | |
| CTCTTGGCAAAGAGGGCAGG+GGG | - | chr7_4:46835607-46835626 | Msa1157800:intron | 60.0% | |
| TCTTGGCAAAGAGGGCAGGG+GGG | - | chr7_4:46835608-46835627 | Msa1157800:intron | 60.0% | |
| ! | GCAGCGGTATGATTAGCCCG+TGG | + | chr7_4:46835711-46835730 | None:intergenic | 60.0% |
| AGGCTCCTCCAAGTCCTCGT+CGG | + | chr7_4:46836432-46836451 | None:intergenic | 60.0% | |
| CAAGGGAGTCTAACGGAGGC+AGG | + | chr7_4:46836490-46836509 | None:intergenic | 60.0% | |
| CCACCACCGACGTCTGGTGT+AGG | + | chr7_4:46835801-46835820 | None:intergenic | 65.0% | |
| CCTACACCAGACGTCGGTGG+TGG | - | chr7_4:46835798-46835817 | Msa1157800:intron | 65.0% | |
| GCATCACCACCACCGACGTC+TGG | + | chr7_4:46835807-46835826 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 46834105 | 46836910 | 46834105 | ID=Msa1157800;Name=Msa1157800 |
| chr7_4 | mRNA | 46834105 | 46836910 | 46834105 | ID=Msa1157800-mRNA-1;Parent=Msa1157800;Name=Msa1157800-mRNA-1;_AED=0.18;_eAED=0.18;_QI=203|1|1|1|1|1|2|450|401 |
| chr7_4 | exon | 46834105 | 46835436 | 46834105 | ID=Msa1157800-mRNA-1:exon:12399;Parent=Msa1157800-mRNA-1 |
| chr7_4 | exon | 46836384 | 46836910 | 46836384 | ID=Msa1157800-mRNA-1:exon:12398;Parent=Msa1157800-mRNA-1 |
| chr7_4 | five_prime_UTR | 46836708 | 46836910 | 46836708 | ID=Msa1157800-mRNA-1:five_prime_utr;Parent=Msa1157800-mRNA-1 |
| chr7_4 | CDS | 46836384 | 46836707 | 46836384 | ID=Msa1157800-mRNA-1:cds;Parent=Msa1157800-mRNA-1 |
| chr7_4 | CDS | 46834555 | 46835436 | 46834555 | ID=Msa1157800-mRNA-1:cds;Parent=Msa1157800-mRNA-1 |
| chr7_4 | three_prime_UTR | 46834105 | 46834554 | 46834105 | ID=Msa1157800-mRNA-1:three_prime_utr;Parent=Msa1157800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
