Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159010 | XP_003624692.1 | 98.893 | 542 | 6 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1093 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159010 | sp|Q949Y5|EGY1_ARATH | 68.384 | 563 | 142 | 8 | 1 | 542 | 1 | 548 | 0.0 | 749 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159010 | A2Q1L2 | 98.893 | 542 | 6 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1093 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0066850 | Msa1159010 | 0.826636 | 2.433672e-54 | -8.615850e-47 |
| Msa1159010 | Msa1173380 | 0.809317 | 2.008652e-50 | -8.615850e-47 |
| Msa0530340 | Msa1159010 | 0.804898 | 1.731918e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159010 | MtrunA17_Chr7g0253961 | 98.893 | 542 | 6 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1093 |
| Msa1159010 | MtrunA17_Chr5g0436831 | 30.754 | 517 | 293 | 14 | 10 | 503 | 5 | 479 | 9.74e-54 | 190 |
| Msa1159010 | MtrunA17_Chr4g0003211 | 28.194 | 454 | 270 | 16 | 94 | 525 | 163 | 582 | 2.00e-27 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159010 | AT5G35220.1 | 68.384 | 563 | 142 | 8 | 1 | 542 | 1 | 548 | 0.0 | 749 |
| Msa1159010 | AT5G35210.1 | 89.431 | 123 | 13 | 0 | 329 | 451 | 1543 | 1665 | 3.85e-63 | 224 |
| Msa1159010 | AT5G05740.2 | 27.664 | 535 | 341 | 12 | 2 | 525 | 13 | 512 | 2.00e-46 | 170 |
| Msa1159010 | AT5G05740.3 | 27.444 | 532 | 343 | 12 | 2 | 525 | 13 | 509 | 1.55e-45 | 168 |
| Msa1159010 | AT5G05740.1 | 31.865 | 386 | 231 | 8 | 141 | 525 | 187 | 541 | 2.18e-43 | 162 |
| Msa1159010 | AT1G17870.1 | 29.018 | 448 | 274 | 13 | 94 | 525 | 133 | 552 | 8.41e-31 | 127 |
Find 173 sgRNAs with CRISPR-Local
Find 379 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCACTGCTCATTATAAATA+TGG | 0.190155 | 7_4:+48491412 | None:intergenic |
| CTGTTGGTTGGTTGGTTGTT+TGG | 0.210269 | 7_4:+48496615 | None:intergenic |
| CTGTTGTTTCTTCTCACTAT+TGG | 0.217624 | 7_4:-48494742 | Msa1159010:CDS |
| TGGCCTCAACTAGCCGATTT+TGG | 0.220465 | 7_4:+48494914 | None:intergenic |
| GTCAAGAATTTCACTAGTTC+TGG | 0.220592 | 7_4:+48494506 | None:intergenic |
| TGCCAAAGTGTTGTTTCTTC+TGG | 0.226330 | 7_4:+48494781 | None:intergenic |
| TCTTGACCCTTCTTCCTGTT+TGG | 0.230960 | 7_4:-48491509 | Msa1159010:CDS |
| CTTGACCCTTCTTCCTGTTT+GGG | 0.255687 | 7_4:-48491508 | Msa1159010:CDS |
| GGATATAGCATCTCCATATC+TGG | 0.256518 | 7_4:+48494461 | None:intergenic |
| ACTACAACTTTCTAAATAAA+TGG | 0.258424 | 7_4:+48491271 | None:intergenic |
| TGGACCTCTTTCACTTGCTT+GGG | 0.275717 | 7_4:-48491726 | Msa1159010:CDS |
| ATGTTCTCGCAGGGTGCTTT+TGG | 0.278867 | 7_4:-48492069 | Msa1159010:intron |
| TTTCAAGGTTCTTTGCTACT+TGG | 0.284871 | 7_4:-48493123 | Msa1159010:CDS |
| CAGTCATCTTTGTCCTCACT+TGG | 0.286074 | 7_4:-48495153 | Msa1159010:CDS |
| GTGGACCTCTTTCACTTGCT+TGG | 0.295844 | 7_4:-48491727 | Msa1159010:CDS |
| CACATCACTCTTGGCAGCTT+TGG | 0.298162 | 7_4:-48493566 | Msa1159010:CDS |
| TCGCTTGCGGGTCCCTTTGC+CGG | 0.305097 | 7_4:-48493240 | Msa1159010:CDS |
| GAAGGGGTTGTTGATTTATC+AGG | 0.311243 | 7_4:+48496192 | None:intergenic |
| CCTCTAGCATATGGTGTCTT+GGG | 0.315299 | 7_4:-48494419 | Msa1159010:CDS |
| TGTTGGTTGGTTGGTTGTTT+GGG | 0.323389 | 7_4:+48496616 | None:intergenic |
| CGTGTTCCATTTCCGTGTTA+TGG | 0.324339 | 7_4:-48496564 | Msa1159010:five_prime_UTR |
| GGATGAGCTTGCAGAGGAAC+TGG | 0.328392 | 7_4:-48491487 | Msa1159010:CDS |
| GTGACCAAAGAGGAGCCTTT+TGG | 0.334715 | 7_4:-48495006 | Msa1159010:CDS |
| GTGCTTCAACTTTCCCCATT+TGG | 0.339283 | 7_4:+48496350 | None:intergenic |
| ATTCACCCTCTTGTGATTGC+AGG | 0.348776 | 7_4:-48492790 | Msa1159010:CDS |
| TCTACTTGTGTACTTCTATC+AGG | 0.357405 | 7_4:+48493267 | None:intergenic |
| CTCAGCTTCTGTTGGTTGGT+TGG | 0.359170 | 7_4:+48496607 | None:intergenic |
| AACCGGTTCACTGTTCCTTC+AGG | 0.362957 | 7_4:-48496413 | Msa1159010:CDS |
| TGCTGATGTAAAGAAAATTA+AGG | 0.367055 | 7_4:-48495058 | Msa1159010:CDS |
| TTCCCCAAAAGGCTCCTCTT+TGG | 0.372775 | 7_4:+48495002 | None:intergenic |
| AATTGAATTAACCTTTCCTT+TGG | 0.375547 | 7_4:+48491365 | None:intergenic |
| TCCAGATGTAGCTGGAGATT+TGG | 0.375838 | 7_4:-48493166 | Msa1159010:CDS |
| CTATACTGAAGCCCCAGATA+TGG | 0.376906 | 7_4:-48494474 | Msa1159010:CDS |
| TCATTTAAGCATGGTTTCTC+TGG | 0.385090 | 7_4:+48491591 | None:intergenic |
| CTTCCAGTGGGGTGCCTTGA+CGG | 0.386309 | 7_4:-48492600 | Msa1159010:CDS |
| ACCTCTAGCATATGGTGTCT+TGG | 0.395634 | 7_4:-48494420 | Msa1159010:CDS |
| CAATTCACATGTATCCAAAT+GGG | 0.399438 | 7_4:-48496364 | Msa1159010:CDS |
| TCAATTCACATGTATCCAAA+TGG | 0.399722 | 7_4:-48496365 | Msa1159010:CDS |
| GTTGATGATGAAGGTGAAAA+TGG | 0.400731 | 7_4:-48496279 | Msa1159010:CDS |
| GCAATCACAAGAGGGTGAAT+TGG | 0.402120 | 7_4:+48492793 | None:intergenic |
| AACCGGAACTCTGAGTTTAG+AGG | 0.402939 | 7_4:+48496438 | None:intergenic |
| AAAGGTGCACTAATGGTCTT+TGG | 0.405079 | 7_4:-48492045 | Msa1159010:CDS |
| CACTTATACATTGCTAGGGC+TGG | 0.407316 | 7_4:-48492016 | Msa1159010:CDS |
| AGTTGATTCTTTCAAACTCA+TGG | 0.408022 | 7_4:-48495109 | Msa1159010:CDS |
| AAGCATGTTAAAAGCTTGTA+TGG | 0.409658 | 7_4:+48492620 | None:intergenic |
| TTCATTCCCCACATCACTCT+TGG | 0.410966 | 7_4:-48493575 | Msa1159010:CDS |
| CGTGGTCCACCCCGTGGATC+AGG | 0.411187 | 7_4:+48494841 | None:intergenic |
| TGGGGTGCCTTGACGGTGGC+AGG | 0.417438 | 7_4:-48492593 | Msa1159010:CDS |
| TTTCAATCAATAACAAAGAC+GGG | 0.418124 | 7_4:-48496302 | Msa1159010:CDS |
| CAGGTTCCTCCACCATAAAA+AGG | 0.418306 | 7_4:+48494875 | None:intergenic |
| TCAAGAATTTCACTAGTTCT+GGG | 0.419903 | 7_4:+48494507 | None:intergenic |
| GTTCCTAGCATGTTGTTTCA+AGG | 0.423181 | 7_4:-48493138 | Msa1159010:CDS |
| GGATCAGGACTGTCTGAATC+AGG | 0.423642 | 7_4:+48494856 | None:intergenic |
| CAGCTTTGGTGCTATTACTC+AGG | 0.424343 | 7_4:-48493552 | Msa1159010:intron |
| AGCAGTGAAATGAAATATAT+AGG | 0.433869 | 7_4:-48491398 | Msa1159010:three_prime_UTR |
| CTGACCACTTATACATTGCT+AGG | 0.438531 | 7_4:-48492021 | Msa1159010:CDS |
| AACAGTGAACCGGTTTGAAC+CGG | 0.439164 | 7_4:+48496421 | None:intergenic |
| CAAGTAGACATATCGCTTGC+GGG | 0.439171 | 7_4:-48493252 | Msa1159010:CDS |
| ATTGGTACCTCGGTGGAGAT+AGG | 0.444124 | 7_4:-48494724 | Msa1159010:CDS |
| TCTTCTCAGCTTCTGTTGGT+TGG | 0.444512 | 7_4:+48496603 | None:intergenic |
| TTAACACCATAACACGGAAA+TGG | 0.447212 | 7_4:+48496558 | None:intergenic |
| TTCCTGAAGGAACAGTGAAC+CGG | 0.447813 | 7_4:+48496411 | None:intergenic |
| TCTGGGGCTTCAGTATAGTT+AGG | 0.447919 | 7_4:+48494479 | None:intergenic |
| CTCCTCTTTGGTCACCCAAA+AGG | 0.448155 | 7_4:+48495014 | None:intergenic |
| TCCCTCTAAACTCAGAGTTC+CGG | 0.449415 | 7_4:-48496440 | Msa1159010:CDS |
| GGTGGACCACGTGTTAGCTT+TGG | 0.449705 | 7_4:-48494829 | Msa1159010:CDS |
| TTCAAACTCATGGAACTCCT+TGG | 0.452837 | 7_4:-48495099 | Msa1159010:CDS |
| CTCAGAGTTCCGGTTCAAAC+CGG | 0.459234 | 7_4:-48496430 | Msa1159010:CDS |
| TCTGCAAGCTCATCCCAAAC+AGG | 0.459412 | 7_4:+48491495 | None:intergenic |
| ACATGGAGACAGACATTTGT+GGG | 0.464417 | 7_4:-48491552 | Msa1159010:CDS |
| TTAAAGCCTCTATCTTCATC+AGG | 0.474419 | 7_4:+48496216 | None:intergenic |
| GATATAGCATCTCCATATCT+GGG | 0.477330 | 7_4:+48494462 | None:intergenic |
| ACCAAATCTCCAGCTACATC+TGG | 0.477559 | 7_4:+48493165 | None:intergenic |
| TCAGCAGGATCAACCTTCTC+AGG | 0.479830 | 7_4:+48495075 | None:intergenic |
| TGACGGTGGCAGGTCTGTGC+AGG | 0.486800 | 7_4:-48492583 | Msa1159010:intron |
| GACGTTGCGGTTCAGAGGGA+TGG | 0.488357 | 7_4:+48496533 | None:intergenic |
| TAGCTTTGGTTTGCTGCGTA+AGG | 0.490822 | 7_4:-48494815 | Msa1159010:CDS |
| GGAGATAGGAATTGCATCTC+AGG | 0.493700 | 7_4:-48494710 | Msa1159010:intron |
| CCTTCTCCCAGTTCCCCAAA+AGG | 0.498326 | 7_4:+48494991 | None:intergenic |
| AAGTGTTGTTTCTTCTGGCT+CGG | 0.498944 | 7_4:+48494786 | None:intergenic |
| ACACTCTTCTCAGCTTCTGT+TGG | 0.499259 | 7_4:+48496599 | None:intergenic |
| TTCAGACAGTCCTGATCCAC+GGG | 0.502482 | 7_4:-48494851 | Msa1159010:CDS |
| TCTTCTCACTATTGGTACCT+CGG | 0.503620 | 7_4:-48494734 | Msa1159010:CDS |
| CTCTAGCATATGGTGTCTTG+GGG | 0.503901 | 7_4:-48494418 | Msa1159010:CDS |
| GGACCTCTTTCACTTGCTTG+GGG | 0.505016 | 7_4:-48491725 | Msa1159010:CDS |
| AGGCAACACTGTTGTTACAT+TGG | 0.508938 | 7_4:+48496236 | None:intergenic |
| GGTAACGCTGACTCAACAAA+TGG | 0.509174 | 7_4:+48494440 | None:intergenic |
| CAGCCCTAGCAATGTATAAG+TGG | 0.509270 | 7_4:+48492017 | None:intergenic |
| TGATAGCACAGCACCGGCAA+AGG | 0.510784 | 7_4:+48493227 | None:intergenic |
| GCTCATCCCAAACAGGAAGA+AGG | 0.512501 | 7_4:+48491502 | None:intergenic |
| AAAATGTACCCTTTGAGAAG+TGG | 0.514807 | 7_4:+48496170 | None:intergenic |
| AACCCCTTCCACTTCTCAAA+GGG | 0.516182 | 7_4:-48496178 | Msa1159010:intron |
| AATCCCCAAGCAAGTGAAAG+AGG | 0.516614 | 7_4:+48491722 | None:intergenic |
| TTAATCAGTAGAGCAACTCT+TGG | 0.517207 | 7_4:-48493099 | Msa1159010:CDS |
| CCACCGTCAAGGCACCCCAC+TGG | 0.518725 | 7_4:+48492597 | None:intergenic |
| TATGGCTATGTGCAGGAGGT+TGG | 0.519283 | 7_4:-48493647 | Msa1159010:intron |
| TCAGCGTTACCTCTAGCATA+TGG | 0.519937 | 7_4:-48494428 | Msa1159010:CDS |
| CATAATATTCGTGTTAACAA+TGG | 0.524389 | 7_4:+48491319 | None:intergenic |
| GATAGCACAGCACCGGCAAA+GGG | 0.535952 | 7_4:+48493228 | None:intergenic |
| CTTTGGTTTGCTGCGTAAGG+AGG | 0.537726 | 7_4:-48494812 | Msa1159010:CDS |
| GTGATGTGGGGAATGAAGAA+AGG | 0.538215 | 7_4:+48493581 | None:intergenic |
| ACGTTGCGGTTCAGAGGGAT+GGG | 0.539275 | 7_4:+48496534 | None:intergenic |
| TCATCAAATCCAGATGTAGC+TGG | 0.539401 | 7_4:-48493174 | Msa1159010:CDS |
| TTAAATGACGTGACAGAAGT+TGG | 0.539625 | 7_4:-48491576 | Msa1159010:CDS |
| AACATGGAGACAGACATTTG+TGG | 0.544900 | 7_4:-48491553 | Msa1159010:CDS |
| GGAACTCCTTGGACCTGAGA+AGG | 0.547475 | 7_4:-48495088 | Msa1159010:CDS |
| GGAGAAATGAAGAAGATGAA+AGG | 0.550917 | 7_4:+48496502 | None:intergenic |
| AAAGCTGCCAAGAGTGATGT+GGG | 0.551767 | 7_4:+48493568 | None:intergenic |
| AAACGACGTTGCGGTTCAGA+GGG | 0.551794 | 7_4:+48496529 | None:intergenic |
| AAAACGACGTTGCGGTTCAG+AGG | 0.552456 | 7_4:+48496528 | None:intergenic |
| ACGACAAAATCAAAACCAAA+CGG | 0.553988 | 7_4:+48496656 | None:intergenic |
| CTGGATTTGATGAAAGAAGA+AGG | 0.558511 | 7_4:+48493184 | None:intergenic |
| GAACCTTGAAACAACATGCT+AGG | 0.560365 | 7_4:+48493135 | None:intergenic |
| CAACCCCTTCCACTTCTCAA+AGG | 0.560620 | 7_4:-48496179 | Msa1159010:CDS |
| TGGATACATGTGAATTGAAA+CGG | 0.566171 | 7_4:+48496370 | None:intergenic |
| CTTGCAGAGGAACTGGGCAT+AGG | 0.570390 | 7_4:-48491480 | Msa1159010:CDS |
| AATTGAAACGGTGGTTGTAG+TGG | 0.573177 | 7_4:+48496382 | None:intergenic |
| CTCATCCCAAACAGGAAGAA+GGG | 0.573186 | 7_4:+48491503 | None:intergenic |
| AAGAATTTCACTAGTTCTGG+GGG | 0.574258 | 7_4:+48494509 | None:intergenic |
| ACTTATACATTGCTAGGGCT+GGG | 0.577424 | 7_4:-48492015 | Msa1159010:CDS |
| TGAAGCACGTTGATTTCGAT+AGG | 0.579208 | 7_4:-48496335 | Msa1159010:CDS |
| AGCCAGAAGAAACAACACTT+TGG | 0.580731 | 7_4:-48494783 | Msa1159010:CDS |
| ACCGGAACTCTGAGTTTAGA+GGG | 0.580910 | 7_4:+48496439 | None:intergenic |
| GAAAATCATTACCAAAGGAA+AGG | 0.581591 | 7_4:-48491376 | Msa1159010:three_prime_UTR |
| TACCCTTTGAGAAGTGGAAG+GGG | 0.582147 | 7_4:+48496176 | None:intergenic |
| TCTGTCACGTCATTTAAGCA+TGG | 0.582580 | 7_4:+48491582 | None:intergenic |
| AGCTGAGAAGAGTGTGTCTG+TGG | 0.585533 | 7_4:-48496591 | Msa1159010:five_prime_UTR |
| AATCGGCTAGTTGAGGCCAC+TGG | 0.587533 | 7_4:-48494910 | Msa1159010:CDS |
| GTACCCTTTGAGAAGTGGAA+GGG | 0.589632 | 7_4:+48496175 | None:intergenic |
| CAAAGCTGCCAAGAGTGATG+TGG | 0.590303 | 7_4:+48493567 | None:intergenic |
| TACATTGCTAGGGCTGGGAG+TGG | 0.592680 | 7_4:-48492010 | Msa1159010:intron |
| ATTCAGACAGTCCTGATCCA+CGG | 0.596032 | 7_4:-48494852 | Msa1159010:CDS |
| ACGTGACAGAAGTTGGAACA+TGG | 0.597819 | 7_4:-48491569 | Msa1159010:CDS |
| AATTCACATGTATCCAAATG+GGG | 0.601240 | 7_4:-48496363 | Msa1159010:CDS |
| AAAGACGGGGTTGATGATGA+AGG | 0.601506 | 7_4:-48496288 | Msa1159010:CDS |
| CAAGAATTTCACTAGTTCTG+GGG | 0.603253 | 7_4:+48494508 | None:intergenic |
| GATGAGCTTGCAGAGGAACT+GGG | 0.604398 | 7_4:-48491486 | Msa1159010:CDS |
| CGAAAATGATAGCACAGCAC+CGG | 0.604413 | 7_4:+48493221 | None:intergenic |
| ACCCTCTTGTGATTGCAGGA+TGG | 0.607627 | 7_4:-48492786 | Msa1159010:intron |
| TATAGGAAAATCATTACCAA+AGG | 0.607998 | 7_4:-48491381 | Msa1159010:three_prime_UTR |
| AAATTTAAGGGGAAAGAGAG+AGG | 0.608483 | 7_4:-48494953 | Msa1159010:CDS |
| GCACAGACCTGCCACCGTCA+AGG | 0.611900 | 7_4:+48492586 | None:intergenic |
| ACAAGTAGACATATCGCTTG+CGG | 0.612704 | 7_4:-48493253 | Msa1159010:CDS |
| GATCAACCTTCTCAGGTCCA+AGG | 0.613468 | 7_4:+48495082 | None:intergenic |
| GTGTTGCCTGATGAAGATAG+AGG | 0.614182 | 7_4:-48496222 | Msa1159010:CDS |
| TGTACCCTTTGAGAAGTGGA+AGG | 0.616046 | 7_4:+48496174 | None:intergenic |
| CTTGTGTACTTCTATCAGGA+AGG | 0.616260 | 7_4:+48493271 | None:intergenic |
| ACTCCAAAATCGGCTAGTTG+AGG | 0.625387 | 7_4:-48494917 | Msa1159010:CDS |
| TACCATCCTGCAATCACAAG+AGG | 0.630281 | 7_4:+48492784 | None:intergenic |
| TGTTTGGGATGAGCTTGCAG+AGG | 0.630439 | 7_4:-48491493 | Msa1159010:CDS |
| TGACCACTTATACATTGCTA+GGG | 0.633786 | 7_4:-48492020 | Msa1159010:CDS |
| CCAGTGGGGTGCCTTGACGG+TGG | 0.634620 | 7_4:-48492597 | Msa1159010:CDS |
| CATGGAGACAGACATTTGTG+GGG | 0.635920 | 7_4:-48491551 | Msa1159010:CDS |
| TCTAGCATATGGTGTCTTGG+GGG | 0.643894 | 7_4:-48494417 | Msa1159010:CDS |
| TAACCATTAAAACTAAAATG+TGG | 0.650160 | 7_4:+48491449 | None:intergenic |
| ACCATCCTGCAATCACAAGA+GGG | 0.650517 | 7_4:+48492785 | None:intergenic |
| GACAGTCCTGATCCACGGGG+TGG | 0.665591 | 7_4:-48494847 | Msa1159010:CDS |
| TCTCACTATTGGTACCTCGG+TGG | 0.666071 | 7_4:-48494731 | Msa1159010:CDS |
| TTCAATCAATAACAAAGACG+GGG | 0.671876 | 7_4:-48496301 | Msa1159010:CDS |
| CCCAAGACACCATATGCTAG+AGG | 0.678755 | 7_4:+48494419 | None:intergenic |
| AAGGTTGTACTTATCACCAG+TGG | 0.681260 | 7_4:+48494894 | None:intergenic |
| ATGGAGACAGACATTTGTGG+GGG | 0.683523 | 7_4:-48491550 | Msa1159010:CDS |
| ATATAGCATCTCCATATCTG+GGG | 0.687528 | 7_4:+48494463 | None:intergenic |
| AGCAAACCAAAGCTAACACG+TGG | 0.713698 | 7_4:+48494823 | None:intergenic |
| CTAACACGTGGTCCACCCCG+TGG | 0.717216 | 7_4:+48494835 | None:intergenic |
| AAAGGAATAAAACGACGTTG+CGG | 0.718101 | 7_4:+48496520 | None:intergenic |
| GTTGTACACAGATCCAAGTG+AGG | 0.722197 | 7_4:+48495140 | None:intergenic |
| ATGGGTTTAACACCATAACA+CGG | 0.726240 | 7_4:+48496552 | None:intergenic |
| AAGCTGCCAAGAGTGATGTG+GGG | 0.727064 | 7_4:+48493569 | None:intergenic |
| AGAATTTCACTAGTTCTGGG+GGG | 0.730909 | 7_4:+48494510 | None:intergenic |
| TGCAATTCCTATCTCCACCG+AGG | 0.740888 | 7_4:+48494717 | None:intergenic |
| ATACATGTGAATTGAAACGG+TGG | 0.789877 | 7_4:+48496373 | None:intergenic |
| TCAGACAGTCCTGATCCACG+GGG | 0.828272 | 7_4:-48494850 | Msa1159010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAACTTTATTTTATTAATTT+AGG | - | chr7_4:48494905-48494924 | Msa1159010:CDS | 10.0% |
| !! | TTATTTCATTATTCAATATT+AGG | - | chr7_4:48495233-48495252 | Msa1159010:intron | 10.0% |
| !! | TATTAAAAAGATTCAATACT+TGG | - | chr7_4:48492356-48492375 | Msa1159010:intron | 15.0% |
| !!! | ATACATTTTCTTATATCTTA+TGG | + | chr7_4:48493819-48493838 | None:intergenic | 15.0% |
| !!! | TTTTTGAAATTATAGAAGTT+AGG | + | chr7_4:48493886-48493905 | None:intergenic | 15.0% |
| !! | TAATTTCATATGTATAAAAG+TGG | + | chr7_4:48494037-48494056 | None:intergenic | 15.0% |
| !! | AAAGTACATTAAGTTTAATA+CGG | + | chr7_4:48495168-48495187 | None:intergenic | 15.0% |
| !!! | TTTTATTTTTATTGTTTTCC+AGG | - | chr7_4:48495263-48495282 | Msa1159010:intron | 15.0% |
| !!! | TTTTCAATCAATAACAAAGA+CGG | - | chr7_4:48491613-48491632 | Msa1159010:intron | 20.0% |
| !!! | AATGTTGATTCTTTGATATA+TGG | - | chr7_4:48491850-48491869 | Msa1159010:intron | 20.0% |
| !!! | TCATTCTATTTTGGTTTTTA+TGG | - | chr7_4:48492561-48492580 | Msa1159010:intron | 20.0% |
| !!! | TTTTGTCAACTAACTTTTAA+TGG | - | chr7_4:48492593-48492612 | Msa1159010:CDS | 20.0% |
| !!! | AAAATTAAGGATAAGCTTTT+TGG | - | chr7_4:48492871-48492890 | Msa1159010:intron | 20.0% |
| !! | TTTACTGTATTACAAAAAAC+TGG | - | chr7_4:48493612-48493631 | Msa1159010:CDS | 20.0% |
| !!! | AAATTAGTTTTTACGCTAAA+AGG | - | chr7_4:48494051-48494070 | Msa1159010:intron | 20.0% |
| !! | GAAAACTACATAAATAAGAT+AGG | + | chr7_4:48494159-48494178 | None:intergenic | 20.0% |
| !! | TACATTATATTTATACCTGA+TGG | - | chr7_4:48494245-48494264 | Msa1159010:intron | 20.0% |
| !!! | ATGCTTAATTTTACTTGTTT+GGG | + | chr7_4:48494314-48494333 | None:intergenic | 20.0% |
| !!! | AATGCTTAATTTTACTTGTT+TGG | + | chr7_4:48494315-48494334 | None:intergenic | 20.0% |
| !! | GTATAATAGCAAAAAATAGA+CGG | + | chr7_4:48494521-48494540 | None:intergenic | 20.0% |
| !!! | AAATTATATTCTAGAAAGGA+AGG | + | chr7_4:48494860-48494879 | None:intergenic | 20.0% |
| !!! | GGTAAAATTATATTCTAGAA+AGG | + | chr7_4:48494864-48494883 | None:intergenic | 20.0% |
| !! | CCAATTTAATAATAACCAAT+TGG | + | chr7_4:48495451-48495470 | None:intergenic | 20.0% |
| !! | CCAATTGGTTATTATTAAAT+TGG | - | chr7_4:48495448-48495467 | Msa1159010:intron | 20.0% |
| !!! | TAATTTTGACTGTATGAAAT+GGG | - | chr7_4:48495547-48495566 | Msa1159010:intron | 20.0% |
| !!! | GATATGCATAGTTTTTTTAT+TGG | - | chr7_4:48495572-48495591 | Msa1159010:intron | 20.0% |
| !! | GCATTTAGTATTTACTAATA+TGG | - | chr7_4:48495667-48495686 | Msa1159010:intron | 20.0% |
| !! | CATGTAATGAAACAAAAATT+AGG | + | chr7_4:48495830-48495849 | None:intergenic | 20.0% |
| !!! | ATTTTTTGTTATATTTTCGC+AGG | - | chr7_4:48496214-48496233 | Msa1159010:CDS | 20.0% |
| !!! | TAACCACATTTTAGTTTTAA+TGG | - | chr7_4:48496464-48496483 | Msa1159010:CDS | 20.0% |
| !! | TAACCATTAAAACTAAAATG+TGG | + | chr7_4:48496470-48496489 | None:intergenic | 20.0% |
| !! | TGTAAAGAAAAAGAATACTA+TGG | - | chr7_4:48496621-48496640 | Msa1159010:five_prime_UTR | 20.0% |
| !! | ACTACAACTTTCTAAATAAA+TGG | + | chr7_4:48496648-48496667 | None:intergenic | 20.0% |
| ! | ATTTCTCCATTGAAGAAAAA+TGG | - | chr7_4:48491429-48491448 | Msa1159010:three_prime_UTR | 25.0% |
| ! | TTTCTCCATTGAAGAAAAAT+GGG | - | chr7_4:48491430-48491449 | Msa1159010:three_prime_UTR | 25.0% |
| ! | TTTCAATCAATAACAAAGAC+GGG | - | chr7_4:48491614-48491633 | Msa1159010:intron | 25.0% |
| ! | ACAGTTTCTAACTATAGTAT+AGG | + | chr7_4:48492121-48492140 | None:intergenic | 25.0% |
| !! | GTTTGAGAAATTTTGTATTG+CGG | + | chr7_4:48492234-48492253 | None:intergenic | 25.0% |
| !! | CAAAACACTTACATAGTTTT+TGG | + | chr7_4:48492468-48492487 | None:intergenic | 25.0% |
| !! | TGTTGTCTATCATTCTATTT+TGG | - | chr7_4:48492552-48492571 | Msa1159010:intron | 25.0% |
| !! | TTAATTTTCTTTACATCAGC+AGG | + | chr7_4:48492859-48492878 | None:intergenic | 25.0% |
| ! | TGCTGATGTAAAGAAAATTA+AGG | - | chr7_4:48492858-48492877 | Msa1159010:intron | 25.0% |
| !!! | TTTTTGGTTATTCAACCTTT+TGG | - | chr7_4:48492887-48492906 | Msa1159010:intron | 25.0% |
| !!! | TTTTGGTTATTCAACCTTTT+GGG | - | chr7_4:48492888-48492907 | Msa1159010:intron | 25.0% |
| !! | TTCTTTTCATCGGAAATTTA+AGG | - | chr7_4:48492950-48492969 | Msa1159010:intron | 25.0% |
| !! | TCTTTTCATCGGAAATTTAA+GGG | - | chr7_4:48492951-48492970 | Msa1159010:intron | 25.0% |
| !!! | TTTTTTCCATACTCCAAAAT+CGG | - | chr7_4:48492989-48493008 | Msa1159010:intron | 25.0% |
| !! | TGATAAGTACAACCTTTTTA+TGG | - | chr7_4:48493029-48493048 | Msa1159010:intron | 25.0% |
| !!! | AAACTTAATTGTTTTAAGCC+GGG | + | chr7_4:48493735-48493754 | None:intergenic | 25.0% |
| !!! | CAAACTTAATTGTTTTAAGC+CGG | + | chr7_4:48493736-48493755 | None:intergenic | 25.0% |
| ! | GGTAAAAGAGAAAAAAAAAG+AGG | + | chr7_4:48493865-48493884 | None:intergenic | 25.0% |
| ! | AAAAGTTCAAGAAGCAAAAA+GGG | + | chr7_4:48494222-48494241 | None:intergenic | 25.0% |
| !! | ATATTTATACCTGATGGATA+TGG | - | chr7_4:48494251-48494270 | Msa1159010:intron | 25.0% |
| !!! | GTATTTTAGTATGCATCTAA+AGG | - | chr7_4:48494585-48494604 | Msa1159010:intron | 25.0% |
| ! | ATTTAGGTAAAATACTCTAG+TGG | - | chr7_4:48494921-48494940 | Msa1159010:CDS | 25.0% |
| ! | GTTTGTCCTATTTCAAATTT+CGG | - | chr7_4:48495424-48495443 | Msa1159010:intron | 25.0% |
| !!! | CTAATTTTGACTGTATGAAA+TGG | - | chr7_4:48495546-48495565 | Msa1159010:intron | 25.0% |
| !! | TGCTTTGAATTTCACAATTA+AGG | + | chr7_4:48495622-48495641 | None:intergenic | 25.0% |
| ! | GATAAGTAGAAACAATTGAT+CGG | - | chr7_4:48495711-48495730 | Msa1159010:intron | 25.0% |
| ! | CATGAATGAGAATATTTATG+TGG | + | chr7_4:48495752-48495771 | None:intergenic | 25.0% |
| ! | AAATATTCTCATTCATGAGT+TGG | - | chr7_4:48495755-48495774 | Msa1159010:intron | 25.0% |
| !! | GTAAGTCTAATATTTTGCTT+AGG | - | chr7_4:48495928-48495947 | Msa1159010:intron | 25.0% |
| ! | AGTTTAACCATAACATGAAT+TGG | - | chr7_4:48495997-48496016 | Msa1159010:intron | 25.0% |
| ! | TTCACTGCTCATTATAAATA+TGG | + | chr7_4:48496507-48496526 | None:intergenic | 25.0% |
| ! | AGCAGTGAAATGAAATATAT+AGG | - | chr7_4:48496518-48496537 | Msa1159010:five_prime_UTR | 25.0% |
| ! | TATAGGAAAATCATTACCAA+AGG | - | chr7_4:48496535-48496554 | Msa1159010:five_prime_UTR | 25.0% |
| ! | AATTGAATTAACCTTTCCTT+TGG | + | chr7_4:48496554-48496573 | None:intergenic | 25.0% |
| !!! | TAACAATGGTTTTATCACAA+GGG | + | chr7_4:48496586-48496605 | None:intergenic | 25.0% |
| !!! | TTAACAATGGTTTTATCACA+AGG | + | chr7_4:48496587-48496606 | None:intergenic | 25.0% |
| ! | CATAATATTCGTGTTAACAA+TGG | + | chr7_4:48496600-48496619 | None:intergenic | 25.0% |
| ACGACAAAATCAAAACCAAA+CGG | + | chr7_4:48491263-48491282 | None:intergenic | 30.0% | |
| !!! | GGTTTTGATTTTGTCGTATT+TGG | - | chr7_4:48491266-48491285 | Msa1159010:three_prime_UTR | 30.0% |
| !! | AAGTTCCCATTTTTCTTCAA+TGG | + | chr7_4:48491438-48491457 | None:intergenic | 30.0% |
| TGGATACATGTGAATTGAAA+CGG | + | chr7_4:48491549-48491568 | None:intergenic | 30.0% | |
| TCAATTCACATGTATCCAAA+TGG | - | chr7_4:48491551-48491570 | Msa1159010:CDS | 30.0% | |
| CAATTCACATGTATCCAAAT+GGG | - | chr7_4:48491552-48491571 | Msa1159010:CDS | 30.0% | |
| AATTCACATGTATCCAAATG+GGG | - | chr7_4:48491553-48491572 | Msa1159010:CDS | 30.0% | |
| TTCAATCAATAACAAAGACG+GGG | - | chr7_4:48491615-48491634 | Msa1159010:intron | 30.0% | |
| CTTTGATATATGGCTCTTAT+TGG | - | chr7_4:48491860-48491879 | Msa1159010:intron | 30.0% | |
| TAAGCTTTCTATGACTGTTT+GGG | + | chr7_4:48492060-48492079 | None:intergenic | 30.0% | |
| ATAAGCTTTCTATGACTGTT+TGG | + | chr7_4:48492061-48492080 | None:intergenic | 30.0% | |
| AACTATAGTATAGGCATGTT+TGG | + | chr7_4:48492112-48492131 | None:intergenic | 30.0% | |
| !!! | CACTTACATAGTTTTTGGTT+GGG | + | chr7_4:48492463-48492482 | None:intergenic | 30.0% |
| !!! | ACACTTACATAGTTTTTGGT+TGG | + | chr7_4:48492464-48492483 | None:intergenic | 30.0% |
| ! | AGTTGATTCTTTCAAACTCA+TGG | - | chr7_4:48492807-48492826 | Msa1159010:CDS | 30.0% |
| ! | CTTTTCATCGGAAATTTAAG+GGG | - | chr7_4:48492952-48492971 | Msa1159010:intron | 30.0% |
| ! | TAAGTACAACCTTTTTATGG+TGG | - | chr7_4:48493032-48493051 | Msa1159010:intron | 30.0% |
| TTTGAACATCAGTTTGTGAT+TGG | - | chr7_4:48493249-48493268 | Msa1159010:CDS | 30.0% | |
| GATCTGATGAATCAAAAACA+TGG | + | chr7_4:48493378-48493397 | None:intergenic | 30.0% | |
| ! | TCAAGAATTTCACTAGTTCT+GGG | + | chr7_4:48493412-48493431 | None:intergenic | 30.0% |
| ! | TGGATTGAGTTTTCAAAACA+TGG | - | chr7_4:48493632-48493651 | Msa1159010:CDS | 30.0% |
| !!! | TAAACATCCTACTTTTTACC+CGG | - | chr7_4:48493714-48493733 | Msa1159010:intron | 30.0% |
| TGAGACATTGTATAGTAGTA+TGG | + | chr7_4:48493911-48493930 | None:intergenic | 30.0% | |
| CTACTATACAATGTCTCATT+AGG | - | chr7_4:48493913-48493932 | Msa1159010:intron | 30.0% | |
| ! | TATGTTGATTGACTCACTAT+TGG | - | chr7_4:48493962-48493981 | Msa1159010:intron | 30.0% |
| GTCAAAAGTTTCAGTTAGTT+TGG | - | chr7_4:48494000-48494019 | Msa1159010:intron | 30.0% | |
| !!! | CAGTTTTTTACACAATTCCA+TGG | - | chr7_4:48494183-48494202 | Msa1159010:intron | 30.0% |
| AAAGTTCAAGAAGCAAAAAG+GGG | + | chr7_4:48494221-48494240 | None:intergenic | 30.0% | |
| CAAAAGTTCAAGAAGCAAAA+AGG | + | chr7_4:48494223-48494242 | None:intergenic | 30.0% | |
| TAATGTCCAAATTGAACCAT+CGG | - | chr7_4:48494482-48494501 | Msa1159010:CDS | 30.0% | |
| ! | ATATTCTAGAAAGGAAGGAA+GGG | + | chr7_4:48494855-48494874 | None:intergenic | 30.0% |
| ! | TATATTCTAGAAAGGAAGGA+AGG | + | chr7_4:48494856-48494875 | None:intergenic | 30.0% |
| TAAAATAAAGTTGCAAGCAC+TGG | + | chr7_4:48494898-48494917 | None:intergenic | 30.0% | |
| TGCAATCATATCATATCACT+TGG | + | chr7_4:48494985-48495004 | None:intergenic | 30.0% | |
| ! | AGTATGCATACTGTATGTTT+TGG | - | chr7_4:48495040-48495059 | Msa1159010:CDS | 30.0% |
| ! | TTTTTATTGTTTTCCAGGTG+TGG | - | chr7_4:48495268-48495287 | Msa1159010:intron | 30.0% |
| ! | TTTTATTGTTTTCCAGGTGT+GGG | - | chr7_4:48495269-48495288 | Msa1159010:intron | 30.0% |
| AAGCATGTTAAAAGCTTGTA+TGG | + | chr7_4:48495299-48495318 | None:intergenic | 30.0% | |
| ACATTTACTTGTCATACAGA+AGG | - | chr7_4:48495382-48495401 | Msa1159010:intron | 30.0% | |
| ! | ATTGGTCCGAAATTTGAAAT+AGG | + | chr7_4:48495433-48495452 | None:intergenic | 30.0% |
| ATTTCAAATTTCGGACCAAT+TGG | - | chr7_4:48495433-48495452 | Msa1159010:intron | 30.0% | |
| ! | TGTAACTATTACCAGTCTTT+TGG | - | chr7_4:48496057-48496076 | Msa1159010:intron | 30.0% |
| AAGCTGTTGAAAAGAGAAAA+GGG | + | chr7_4:48496168-48496187 | None:intergenic | 30.0% | |
| ! | AATTTTCATGATACTTGCAC+AGG | - | chr7_4:48496256-48496275 | Msa1159010:CDS | 30.0% |
| ! | AATAATTGATCTTTTGCCAG+AGG | - | chr7_4:48496299-48496318 | Msa1159010:CDS | 30.0% |
| GAAAATCATTACCAAAGGAA+AGG | - | chr7_4:48496540-48496559 | Msa1159010:five_prime_UTR | 30.0% | |
| !!! | AACAATGGTTTTATCACAAG+GGG | + | chr7_4:48496585-48496604 | None:intergenic | 30.0% |
| TTAACACCATAACACGGAAA+TGG | + | chr7_4:48491361-48491380 | None:intergenic | 35.0% | |
| ATGGGTTTAACACCATAACA+CGG | + | chr7_4:48491367-48491386 | None:intergenic | 35.0% | |
| AAAGGAATAAAACGACGTTG+CGG | + | chr7_4:48491399-48491418 | None:intergenic | 35.0% | |
| GGAGAAATGAAGAAGATGAA+AGG | + | chr7_4:48491417-48491436 | None:intergenic | 35.0% | |
| ATACATGTGAATTGAAACGG+TGG | + | chr7_4:48491546-48491565 | None:intergenic | 35.0% | |
| !! | GTTGATGATGAAGGTGAAAA+TGG | - | chr7_4:48491637-48491656 | Msa1159010:intron | 35.0% |
| TTAAAGCCTCTATCTTCATC+AGG | + | chr7_4:48491703-48491722 | None:intergenic | 35.0% | |
| ! | AAAATGTACCCTTTGAGAAG+TGG | + | chr7_4:48491749-48491768 | None:intergenic | 35.0% |
| ! | TCTTGTGTTCTTTTCTTGCT+TGG | - | chr7_4:48491786-48491805 | Msa1159010:intron | 35.0% |
| TAGTATAGGCATGTTTGGAT+TGG | + | chr7_4:48492107-48492126 | None:intergenic | 35.0% | |
| GTTAGAAACTGTTACAGACT+TGG | - | chr7_4:48492129-48492148 | Msa1159010:intron | 35.0% | |
| TTAGTCTACCTAGTGTTTAG+TGG | - | chr7_4:48492172-48492191 | Msa1159010:intron | 35.0% | |
| CTCAAACTGTTGTCAAATAG+CGG | - | chr7_4:48492247-48492266 | Msa1159010:intron | 35.0% | |
| TATAGCAATTGCAGTGTAGT+GGG | - | chr7_4:48492271-48492290 | Msa1159010:intron | 35.0% | |
| CCAAATATCACCAAACAAAG+AGG | + | chr7_4:48492330-48492349 | None:intergenic | 35.0% | |
| ! | CCTCTTTGTTTGGTGATATT+TGG | - | chr7_4:48492327-48492346 | Msa1159010:intron | 35.0% |
| !!! | AGTTTTTGGTTGGGAACAAA+TGG | + | chr7_4:48492454-48492473 | None:intergenic | 35.0% |
| !!! | TGTGGGTTTTTTAACACATG+AGG | + | chr7_4:48492662-48492681 | None:intergenic | 35.0% |
| AAATTTAAGGGGAAAGAGAG+AGG | - | chr7_4:48492963-48492982 | Msa1159010:intron | 35.0% | |
| !! | CTGTTGTTTCTTCTCACTAT+TGG | - | chr7_4:48493174-48493193 | Msa1159010:CDS | 35.0% |
| ATAGACACGACAGAAGAAAA+TGG | + | chr7_4:48493341-48493360 | None:intergenic | 35.0% | |
| !! | AAGAATTTCACTAGTTCTGG+GGG | + | chr7_4:48493410-48493429 | None:intergenic | 35.0% |
| !! | CAAGAATTTCACTAGTTCTG+GGG | + | chr7_4:48493411-48493430 | None:intergenic | 35.0% |
| GTCAAGAATTTCACTAGTTC+TGG | + | chr7_4:48493413-48493432 | None:intergenic | 35.0% | |
| ATATAGCATCTCCATATCTG+GGG | + | chr7_4:48493456-48493475 | None:intergenic | 35.0% | |
| GATATAGCATCTCCATATCT+GGG | + | chr7_4:48493457-48493476 | None:intergenic | 35.0% | |
| CAAACGCACACAAAAAAGAA+CGG | + | chr7_4:48493556-48493575 | None:intergenic | 35.0% | |
| CAAAACATGGTCTATGACTA+CGG | - | chr7_4:48493645-48493664 | Msa1159010:intron | 35.0% | |
| ! | TTTTAAGCCGGGTAAAAAGT+AGG | + | chr7_4:48493724-48493743 | None:intergenic | 35.0% |
| ACTATGTAGTACTGTGACAA+CGG | - | chr7_4:48493778-48493797 | Msa1159010:intron | 35.0% | |
| TCTACTTGTGTACTTCTATC+AGG | + | chr7_4:48494652-48494671 | None:intergenic | 35.0% | |
| !!! | TCATTTTCGATGTTTGCTGT+TGG | - | chr7_4:48494709-48494728 | Msa1159010:intron | 35.0% |
| CTGGATTTGATGAAAGAAGA+AGG | + | chr7_4:48494735-48494754 | None:intergenic | 35.0% | |
| TTTCAAGGTTCTTTGCTACT+TGG | - | chr7_4:48494793-48494812 | Msa1159010:CDS | 35.0% | |
| TTAATCAGTAGAGCAACTCT+TGG | - | chr7_4:48494817-48494836 | Msa1159010:CDS | 35.0% | |
| !! | CAAGCACTGGATCTATATTT+AGG | + | chr7_4:48494885-48494904 | None:intergenic | 35.0% |
| ! | ATGATTGCAGCACATCTTTT+TGG | - | chr7_4:48494996-48495015 | Msa1159010:CDS | 35.0% |
| ! | TGATTGCAGCACATCTTTTT+GGG | - | chr7_4:48494997-48495016 | Msa1159010:CDS | 35.0% |
| TGTTAAGAACCACAGATTTG+GGG | + | chr7_4:48495206-48495225 | None:intergenic | 35.0% | |
| GTGTTAAGAACCACAGATTT+GGG | + | chr7_4:48495207-48495226 | None:intergenic | 35.0% | |
| TGTGTTAAGAACCACAGATT+TGG | + | chr7_4:48495208-48495227 | None:intergenic | 35.0% | |
| GCAGGTAAATACATTGCTTA+CGG | - | chr7_4:48495351-48495370 | Msa1159010:intron | 35.0% | |
| AGTAGAAACAATTGATCGGT+AGG | - | chr7_4:48495715-48495734 | Msa1159010:intron | 35.0% | |
| TTTCATTACATGTTCTCGCA+GGG | - | chr7_4:48495838-48495857 | Msa1159010:intron | 35.0% | |
| !! | TTTTGGAAAAGGTGCACTAA+TGG | - | chr7_4:48495864-48495883 | Msa1159010:intron | 35.0% |
| TGACCACTTATACATTGCTA+GGG | - | chr7_4:48495896-48495915 | Msa1159010:intron | 35.0% | |
| GCTCTAACCAATTCATGTTA+TGG | + | chr7_4:48496007-48496026 | None:intergenic | 35.0% | |
| CTGAAAAATGACCAAAAGAC+TGG | + | chr7_4:48496071-48496090 | None:intergenic | 35.0% | |
| AGCTGTTGAAAAGAGAAAAG+GGG | + | chr7_4:48496167-48496186 | None:intergenic | 35.0% | |
| CAAGCTGTTGAAAAGAGAAA+AGG | + | chr7_4:48496169-48496188 | None:intergenic | 35.0% | |
| ! | CTTTTCTCTTTTCAACAGCT+TGG | - | chr7_4:48496167-48496186 | Msa1159010:intron | 35.0% |
| TCATTTAAGCATGGTTTCTC+TGG | + | chr7_4:48496328-48496347 | None:intergenic | 35.0% | |
| TTAAATGACGTGACAGAAGT+TGG | - | chr7_4:48496340-48496359 | Msa1159010:CDS | 35.0% | |
| ! | TGTTGGTTGGTTGGTTGTTT+GGG | + | chr7_4:48491303-48491322 | None:intergenic | 40.0% |
| !!! | GTAGTGGATTTTGTTCCTGA+AGG | + | chr7_4:48491521-48491540 | None:intergenic | 40.0% |
| AATTGAAACGGTGGTTGTAG+TGG | + | chr7_4:48491537-48491556 | None:intergenic | 40.0% | |
| !! | TGAAGCACGTTGATTTCGAT+AGG | - | chr7_4:48491581-48491600 | Msa1159010:CDS | 40.0% |
| AGGCAACACTGTTGTTACAT+TGG | + | chr7_4:48491683-48491702 | None:intergenic | 40.0% | |
| !! | GAAGGGGTTGTTGATTTATC+AGG | + | chr7_4:48491727-48491746 | None:intergenic | 40.0% |
| ! | TGTGTTCTTTTCTTGCTTGG+TGG | - | chr7_4:48491789-48491808 | Msa1159010:intron | 40.0% |
| TGTTTAGTGGCTGAAGTGTA+CGG | - | chr7_4:48492185-48492204 | Msa1159010:intron | 40.0% | |
| CTATAGCAATTGCAGTGTAG+TGG | - | chr7_4:48492270-48492289 | Msa1159010:intron | 40.0% | |
| AGAGATTTGAACGAAGAAGG+AGG | - | chr7_4:48492294-48492313 | Msa1159010:intron | 40.0% | |
| AGAGAGGAATCCTCTTTGTT+TGG | - | chr7_4:48492317-48492336 | Msa1159010:intron | 40.0% | |
| CTCCTTCTTCAAGAAACTTG+TGG | + | chr7_4:48492382-48492401 | None:intergenic | 40.0% | |
| CACAAGTTTCTTGAAGAAGG+AGG | - | chr7_4:48492380-48492399 | Msa1159010:intron | 40.0% | |
| TAAGCTTCTTCGTGGTAGAA+GGG | + | chr7_4:48492514-48492533 | None:intergenic | 40.0% | |
| ATTAGAAGTTGCTGATCCGT+GGG | + | chr7_4:48492636-48492655 | None:intergenic | 40.0% | |
| CAACAGGAACATTGATCTGT+GGG | + | chr7_4:48492679-48492698 | None:intergenic | 40.0% | |
| CTCACGCTTAAAAATGCAAC+AGG | + | chr7_4:48492695-48492714 | None:intergenic | 40.0% | |
| TTCAAACTCATGGAACTCCT+TGG | - | chr7_4:48492817-48492836 | Msa1159010:CDS | 40.0% | |
| !!! | AACTAGCCGATTTTGGAGTA+TGG | + | chr7_4:48492998-48493017 | None:intergenic | 40.0% |
| AAGGTTGTACTTATCACCAG+TGG | + | chr7_4:48493025-48493044 | None:intergenic | 40.0% | |
| ! | GTACAACCTTTTTATGGTGG+AGG | - | chr7_4:48493035-48493054 | Msa1159010:intron | 40.0% |
| !! | AAGTGTTGTTTCTTCTGGCT+CGG | + | chr7_4:48493133-48493152 | None:intergenic | 40.0% |
| AGCCAGAAGAAACAACACTT+TGG | - | chr7_4:48493133-48493152 | Msa1159010:CDS | 40.0% | |
| !! | TGCCAAAGTGTTGTTTCTTC+TGG | + | chr7_4:48493138-48493157 | None:intergenic | 40.0% |
| TCTTCTCACTATTGGTACCT+CGG | - | chr7_4:48493182-48493201 | Msa1159010:CDS | 40.0% | |
| GAATTGCATCTCAGGTATGT+TGG | - | chr7_4:48493214-48493233 | Msa1159010:CDS | 40.0% | |
| !! | AGAATTTCACTAGTTCTGGG+GGG | + | chr7_4:48493409-48493428 | None:intergenic | 40.0% |
| GGATATAGCATCTCCATATC+TGG | + | chr7_4:48493458-48493477 | None:intergenic | 40.0% | |
| ! | GGCAGGTATTTCTACTTGTA+CGG | + | chr7_4:48494077-48494096 | None:intergenic | 40.0% |
| AATCTGCAATCCAGCACATA+TGG | + | chr7_4:48494098-48494117 | None:intergenic | 40.0% | |
| AGACTGAATGCAAAAGTGAC+TGG | + | chr7_4:48494412-48494431 | None:intergenic | 40.0% | |
| TTACTGCCGATGGTTCAATT+TGG | + | chr7_4:48494491-48494510 | None:intergenic | 40.0% | |
| AACTACATAACACACAGCCA+TGG | + | chr7_4:48494616-48494635 | None:intergenic | 40.0% | |
| CTTGTGTACTTCTATCAGGA+AGG | + | chr7_4:48494648-48494667 | None:intergenic | 40.0% | |
| ACAAGTAGACATATCGCTTG+CGG | - | chr7_4:48494663-48494682 | Msa1159010:intron | 40.0% | |
| TCATCAAATCCAGATGTAGC+TGG | - | chr7_4:48494742-48494761 | Msa1159010:CDS | 40.0% | |
| !! | GTTCCTAGCATGTTGTTTCA+AGG | - | chr7_4:48494778-48494797 | Msa1159010:CDS | 40.0% |
| GAACCTTGAAACAACATGCT+AGG | + | chr7_4:48494784-48494803 | None:intergenic | 40.0% | |
| ! | TCTAGTGGATCGTTATGTGT+GGG | - | chr7_4:48494936-48494955 | Msa1159010:CDS | 40.0% |
| CATATCACTTGGAAACAGCT+TGG | + | chr7_4:48494974-48494993 | None:intergenic | 40.0% | |
| CAGTGTGTCAAAGTTAACTG+TGG | + | chr7_4:48495066-48495085 | None:intergenic | 40.0% | |
| CAAATCAATCCCCAAATCTG+TGG | - | chr7_4:48495194-48495213 | Msa1159010:intron | 40.0% | |
| ! | AGCTTTTAACATGCTTCCAG+TGG | - | chr7_4:48495303-48495322 | Msa1159010:intron | 40.0% |
| ! | GCTTTTAACATGCTTCCAGT+GGG | - | chr7_4:48495304-48495323 | Msa1159010:intron | 40.0% |
| ! | CTTTTAACATGCTTCCAGTG+GGG | - | chr7_4:48495305-48495324 | Msa1159010:intron | 40.0% |
| GTTTCATTACATGTTCTCGC+AGG | - | chr7_4:48495837-48495856 | Msa1159010:intron | 40.0% | |
| ! | AAAGGTGCACTAATGGTCTT+TGG | - | chr7_4:48495871-48495890 | Msa1159010:intron | 40.0% |
| CTGACCACTTATACATTGCT+AGG | - | chr7_4:48495895-48495914 | Msa1159010:intron | 40.0% | |
| ACTTATACATTGCTAGGGCT+GGG | - | chr7_4:48495901-48495920 | Msa1159010:intron | 40.0% | |
| TTGGTTAGAGCTGTGACTAA+AGG | - | chr7_4:48496016-48496035 | Msa1159010:intron | 40.0% | |
| TGGTTAGAGCTGTGACTAAA+GGG | - | chr7_4:48496017-48496036 | Msa1159010:intron | 40.0% | |
| ! | TTCTCTTTTCAACAGCTTGG+TGG | - | chr7_4:48496170-48496189 | Msa1159010:intron | 40.0% |
| TCTGTCACGTCATTTAAGCA+TGG | + | chr7_4:48496337-48496356 | None:intergenic | 40.0% | |
| AACATGGAGACAGACATTTG+TGG | - | chr7_4:48496363-48496382 | Msa1159010:CDS | 40.0% | |
| ACATGGAGACAGACATTTGT+GGG | - | chr7_4:48496364-48496383 | Msa1159010:CDS | 40.0% | |
| ! | CTGTTGGTTGGTTGGTTGTT+TGG | + | chr7_4:48491304-48491323 | None:intergenic | 45.0% |
| TCTTCTCAGCTTCTGTTGGT+TGG | + | chr7_4:48491316-48491335 | None:intergenic | 45.0% | |
| ACACTCTTCTCAGCTTCTGT+TGG | + | chr7_4:48491320-48491339 | None:intergenic | 45.0% | |
| CGTGTTCCATTTCCGTGTTA+TGG | - | chr7_4:48491352-48491371 | Msa1159010:three_prime_UTR | 45.0% | |
| TCCCTCTAAACTCAGAGTTC+CGG | - | chr7_4:48491476-48491495 | Msa1159010:CDS | 45.0% | |
| ACCGGAACTCTGAGTTTAGA+GGG | + | chr7_4:48491480-48491499 | None:intergenic | 45.0% | |
| AACCGGAACTCTGAGTTTAG+AGG | + | chr7_4:48491481-48491500 | None:intergenic | 45.0% | |
| !! | AACAGTGAACCGGTTTGAAC+CGG | + | chr7_4:48491498-48491517 | None:intergenic | 45.0% |
| TTCCTGAAGGAACAGTGAAC+CGG | + | chr7_4:48491508-48491527 | None:intergenic | 45.0% | |
| GTGCTTCAACTTTCCCCATT+TGG | + | chr7_4:48491569-48491588 | None:intergenic | 45.0% | |
| !! | AAAGACGGGGTTGATGATGA+AGG | - | chr7_4:48491628-48491647 | Msa1159010:intron | 45.0% |
| GTGTTGCCTGATGAAGATAG+AGG | - | chr7_4:48491694-48491713 | Msa1159010:intron | 45.0% | |
| AACCCCTTCCACTTCTCAAA+GGG | - | chr7_4:48491738-48491757 | Msa1159010:intron | 45.0% | |
| ! | TACCCTTTGAGAAGTGGAAG+GGG | + | chr7_4:48491743-48491762 | None:intergenic | 45.0% |
| ! | GTACCCTTTGAGAAGTGGAA+GGG | + | chr7_4:48491744-48491763 | None:intergenic | 45.0% |
| ! | TGTACCCTTTGAGAAGTGGA+AGG | + | chr7_4:48491745-48491764 | None:intergenic | 45.0% |
| CACTTCAGCCACTAAACACT+AGG | + | chr7_4:48492183-48492202 | None:intergenic | 45.0% | |
| GGGAGAGATTTGAACGAAGA+AGG | - | chr7_4:48492291-48492310 | Msa1159010:intron | 45.0% | |
| GGCCACAAGTTTCTTGAAGA+AGG | - | chr7_4:48492377-48492396 | Msa1159010:intron | 45.0% | |
| TTGGGAACAAATGGAGAGGA+GGG | + | chr7_4:48492445-48492464 | None:intergenic | 45.0% | |
| TTGGTTGGGAACAAATGGAG+AGG | + | chr7_4:48492449-48492468 | None:intergenic | 45.0% | |
| CTAAGCTTCTTCGTGGTAGA+AGG | + | chr7_4:48492515-48492534 | None:intergenic | 45.0% | |
| AGATCTGCTAAGCTTCTTCG+TGG | + | chr7_4:48492522-48492541 | None:intergenic | 45.0% | |
| GTACATGTGCTTGAAACCCA+CGG | - | chr7_4:48492617-48492636 | Msa1159010:CDS | 45.0% | |
| CATTAGAAGTTGCTGATCCG+TGG | + | chr7_4:48492637-48492656 | None:intergenic | 45.0% | |
| GCAACAGGAACATTGATCTG+TGG | + | chr7_4:48492680-48492699 | None:intergenic | 45.0% | |
| CAGTCATCTTTGTCCTCACT+TGG | - | chr7_4:48492763-48492782 | Msa1159010:intron | 45.0% | |
| GTTGTACACAGATCCAAGTG+AGG | + | chr7_4:48492779-48492798 | None:intergenic | 45.0% | |
| !! | AACCTTTTGGGTGACCAAAG+AGG | - | chr7_4:48492900-48492919 | Msa1159010:intron | 45.0% |
| ! | TGACCAAAGAGGAGCCTTTT+GGG | - | chr7_4:48492911-48492930 | Msa1159010:intron | 45.0% |
| !!! | GGAGAAGGCGTTCTTTTCAT+CGG | - | chr7_4:48492940-48492959 | Msa1159010:intron | 45.0% |
| ! | ACTCCAAAATCGGCTAGTTG+AGG | - | chr7_4:48492999-48493018 | Msa1159010:intron | 45.0% |
| CAGGTTCCTCCACCATAAAA+AGG | + | chr7_4:48493044-48493063 | None:intergenic | 45.0% | |
| ATTCAGACAGTCCTGATCCA+CGG | - | chr7_4:48493064-48493083 | Msa1159010:intron | 45.0% | |
| AGCAAACCAAAGCTAACACG+TGG | + | chr7_4:48493096-48493115 | None:intergenic | 45.0% | |
| !! | TAGCTTTGGTTTGCTGCGTA+AGG | - | chr7_4:48493101-48493120 | Msa1159010:CDS | 45.0% |
| GGAGATAGGAATTGCATCTC+AGG | - | chr7_4:48493206-48493225 | Msa1159010:CDS | 45.0% | |
| CACGACAGAAGAAAATGGTC+AGG | + | chr7_4:48493336-48493355 | None:intergenic | 45.0% | |
| ! | TCTGGGGCTTCAGTATAGTT+AGG | + | chr7_4:48493440-48493459 | None:intergenic | 45.0% |
| CTATACTGAAGCCCCAGATA+TGG | - | chr7_4:48493442-48493461 | Msa1159010:intron | 45.0% | |
| !! | GGTAACGCTGACTCAACAAA+TGG | + | chr7_4:48493479-48493498 | None:intergenic | 45.0% |
| TCAGCGTTACCTCTAGCATA+TGG | - | chr7_4:48493488-48493507 | Msa1159010:intron | 45.0% | |
| ACCTCTAGCATATGGTGTCT+TGG | - | chr7_4:48493496-48493515 | Msa1159010:intron | 45.0% | |
| CCTCTAGCATATGGTGTCTT+GGG | - | chr7_4:48493497-48493516 | Msa1159010:intron | 45.0% | |
| CTCTAGCATATGGTGTCTTG+GGG | - | chr7_4:48493498-48493517 | Msa1159010:intron | 45.0% | |
| TCTAGCATATGGTGTCTTGG+GGG | - | chr7_4:48493499-48493518 | Msa1159010:intron | 45.0% | |
| ATGTAGTACTGTGACAACGG+CGG | - | chr7_4:48493781-48493800 | Msa1159010:intron | 45.0% | |
| GAAATACCTGCCATATGTGC+TGG | - | chr7_4:48494085-48494104 | Msa1159010:intron | 45.0% | |
| AAGCAAAAAGGGGACGTTGA+TGG | + | chr7_4:48494211-48494230 | None:intergenic | 45.0% | |
| TGCACATAGCCATATCCATC+AGG | + | chr7_4:48494263-48494282 | None:intergenic | 45.0% | |
| ! | TGATGGATATGGCTATGTGC+AGG | - | chr7_4:48494262-48494281 | Msa1159010:intron | 45.0% |
| GTGATGTGGGGAATGAAGAA+AGG | + | chr7_4:48494338-48494357 | None:intergenic | 45.0% | |
| TTCATTCCCCACATCACTCT+TGG | - | chr7_4:48494341-48494360 | Msa1159010:intron | 45.0% | |
| AAAGCTGCCAAGAGTGATGT+GGG | + | chr7_4:48494351-48494370 | None:intergenic | 45.0% | |
| !! | CAGCTTTGGTGCTATTACTC+AGG | - | chr7_4:48494364-48494383 | Msa1159010:intron | 45.0% |
| TGAATGCAAAAGTGACTGGC+TGG | + | chr7_4:48494408-48494427 | None:intergenic | 45.0% | |
| CGGTTAAAAGTTACTGCCGA+TGG | + | chr7_4:48494501-48494520 | None:intergenic | 45.0% | |
| TGCATCTAAAGGCTGATCCA+TGG | - | chr7_4:48494596-48494615 | Msa1159010:intron | 45.0% | |
| CAAGTAGACATATCGCTTGC+GGG | - | chr7_4:48494664-48494683 | Msa1159010:intron | 45.0% | |
| CGAAAATGATAGCACAGCAC+CGG | + | chr7_4:48494698-48494717 | None:intergenic | 45.0% | |
| TCCAGATGTAGCTGGAGATT+TGG | - | chr7_4:48494750-48494769 | Msa1159010:CDS | 45.0% | |
| ACCAAATCTCCAGCTACATC+TGG | + | chr7_4:48494754-48494773 | None:intergenic | 45.0% | |
| ! | CTCTAGTGGATCGTTATGTG+TGG | - | chr7_4:48494935-48494954 | Msa1159010:CDS | 45.0% |
| GCAATCACAAGAGGGTGAAT+TGG | + | chr7_4:48495126-48495145 | None:intergenic | 45.0% | |
| ATTCACCCTCTTGTGATTGC+AGG | - | chr7_4:48495126-48495145 | Msa1159010:CDS | 45.0% | |
| ACCATCCTGCAATCACAAGA+GGG | + | chr7_4:48495134-48495153 | None:intergenic | 45.0% | |
| TACCATCCTGCAATCACAAG+AGG | + | chr7_4:48495135-48495154 | None:intergenic | 45.0% | |
| TTGTATGGTTAACCCACACC+TGG | + | chr7_4:48495284-48495303 | None:intergenic | 45.0% | |
| CAGCCCTAGCAATGTATAAG+TGG | + | chr7_4:48495902-48495921 | None:intergenic | 45.0% | |
| CACTTATACATTGCTAGGGC+TGG | - | chr7_4:48495900-48495919 | Msa1159010:intron | 45.0% | |
| GGTTAGAGCTGTGACTAAAG+GGG | - | chr7_4:48496018-48496037 | Msa1159010:intron | 45.0% | |
| TGGACCTCTTTCACTTGCTT+GGG | - | chr7_4:48496190-48496209 | Msa1159010:CDS | 45.0% | |
| AATCCCCAAGCAAGTGAAAG+AGG | + | chr7_4:48496197-48496216 | None:intergenic | 45.0% | |
| ACGTGACAGAAGTTGGAACA+TGG | - | chr7_4:48496347-48496366 | Msa1159010:CDS | 45.0% | |
| CATGGAGACAGACATTTGTG+GGG | - | chr7_4:48496365-48496384 | Msa1159010:CDS | 45.0% | |
| ATGGAGACAGACATTTGTGG+GGG | - | chr7_4:48496366-48496385 | Msa1159010:CDS | 45.0% | |
| TCTTGACCCTTCTTCCTGTT+TGG | - | chr7_4:48496407-48496426 | Msa1159010:CDS | 45.0% | |
| CTTGACCCTTCTTCCTGTTT+GGG | - | chr7_4:48496408-48496427 | Msa1159010:CDS | 45.0% | |
| CTCATCCCAAACAGGAAGAA+GGG | + | chr7_4:48496416-48496435 | None:intergenic | 45.0% | |
| ! | CTCAGCTTCTGTTGGTTGGT+TGG | + | chr7_4:48491312-48491331 | None:intergenic | 50.0% |
| ! | AGCTGAGAAGAGTGTGTCTG+TGG | - | chr7_4:48491325-48491344 | Msa1159010:three_prime_UTR | 50.0% |
| AAACGACGTTGCGGTTCAGA+GGG | + | chr7_4:48491390-48491409 | None:intergenic | 50.0% | |
| AAAACGACGTTGCGGTTCAG+AGG | + | chr7_4:48491391-48491410 | None:intergenic | 50.0% | |
| CTCAGAGTTCCGGTTCAAAC+CGG | - | chr7_4:48491486-48491505 | Msa1159010:CDS | 50.0% | |
| ! | AACCGGTTCACTGTTCCTTC+AGG | - | chr7_4:48491503-48491522 | Msa1159010:CDS | 50.0% |
| CAACCCCTTCCACTTCTCAA+AGG | - | chr7_4:48491737-48491756 | Msa1159010:intron | 50.0% | |
| TGAACGAAGAAGGAGGAGAG+AGG | - | chr7_4:48492301-48492320 | Msa1159010:intron | 50.0% | |
| TGGGAACAAATGGAGAGGAG+GGG | + | chr7_4:48492444-48492463 | None:intergenic | 50.0% | |
| GTTGGGAACAAATGGAGAGG+AGG | + | chr7_4:48492446-48492465 | None:intergenic | 50.0% | |
| GATCAACCTTCTCAGGTCCA+AGG | + | chr7_4:48492837-48492856 | None:intergenic | 50.0% | |
| TCAGCAGGATCAACCTTCTC+AGG | + | chr7_4:48492844-48492863 | None:intergenic | 50.0% | |
| CTCCTCTTTGGTCACCCAAA+AGG | + | chr7_4:48492905-48492924 | None:intergenic | 50.0% | |
| ! | GTGACCAAAGAGGAGCCTTT+TGG | - | chr7_4:48492910-48492929 | Msa1159010:intron | 50.0% |
| ! | GACCAAAGAGGAGCCTTTTG+GGG | - | chr7_4:48492912-48492931 | Msa1159010:intron | 50.0% |
| TTCCCCAAAAGGCTCCTCTT+TGG | + | chr7_4:48492917-48492936 | None:intergenic | 50.0% | |
| !! | TGGCCTCAACTAGCCGATTT+TGG | + | chr7_4:48493005-48493024 | None:intergenic | 50.0% |
| GGATCAGGACTGTCTGAATC+AGG | + | chr7_4:48493063-48493082 | None:intergenic | 50.0% | |
| TTCAGACAGTCCTGATCCAC+GGG | - | chr7_4:48493065-48493084 | Msa1159010:intron | 50.0% | |
| !! | CTTTGGTTTGCTGCGTAAGG+AGG | - | chr7_4:48493104-48493123 | Msa1159010:CDS | 50.0% |
| TCTCACTATTGGTACCTCGG+TGG | - | chr7_4:48493185-48493204 | Msa1159010:CDS | 50.0% | |
| ATTGGTACCTCGGTGGAGAT+AGG | - | chr7_4:48493192-48493211 | Msa1159010:CDS | 50.0% | |
| TGCAATTCCTATCTCCACCG+AGG | + | chr7_4:48493202-48493221 | None:intergenic | 50.0% | |
| CCCAAGACACCATATGCTAG+AGG | + | chr7_4:48493500-48493519 | None:intergenic | 50.0% | |
| TGCAATCCAGCACATATGGC+AGG | + | chr7_4:48494094-48494113 | None:intergenic | 50.0% | |
| TGGATATGGCTATGTGCAGG+AGG | - | chr7_4:48494265-48494284 | Msa1159010:intron | 50.0% | |
| TATGGCTATGTGCAGGAGGT+TGG | - | chr7_4:48494269-48494288 | Msa1159010:intron | 50.0% | |
| AAGCTGCCAAGAGTGATGTG+GGG | + | chr7_4:48494350-48494369 | None:intergenic | 50.0% | |
| CAAAGCTGCCAAGAGTGATG+TGG | + | chr7_4:48494352-48494371 | None:intergenic | 50.0% | |
| CACATCACTCTTGGCAGCTT+TGG | - | chr7_4:48494350-48494369 | Msa1159010:intron | 50.0% | |
| CTGCCATTGTATGTGCAGAG+CGG | - | chr7_4:48495083-48495102 | Msa1159010:CDS | 50.0% | |
| GAACCGCTCTGCACATACAA+TGG | + | chr7_4:48495089-48495108 | None:intergenic | 50.0% | |
| ACCCTCTTGTGATTGCAGGA+TGG | - | chr7_4:48495130-48495149 | Msa1159010:CDS | 50.0% | |
| !! | ATGTTCTCGCAGGGTGCTTT+TGG | - | chr7_4:48495847-48495866 | Msa1159010:intron | 50.0% |
| !! | TCGCAGGGTGCTTTTGGAAA+AGG | - | chr7_4:48495853-48495872 | Msa1159010:intron | 50.0% |
| AGCTGTGACTAAAGGGGTTG+AGG | - | chr7_4:48496024-48496043 | Msa1159010:intron | 50.0% | |
| TGACTAAAGGGGTTGAGGAG+AGG | - | chr7_4:48496029-48496048 | Msa1159010:intron | 50.0% | |
| GACTAAAGGGGTTGAGGAGA+GGG | - | chr7_4:48496030-48496049 | Msa1159010:intron | 50.0% | |
| GTGGACCTCTTTCACTTGCT+TGG | - | chr7_4:48496189-48496208 | Msa1159010:CDS | 50.0% | |
| GGACCTCTTTCACTTGCTTG+GGG | - | chr7_4:48496191-48496210 | Msa1159010:CDS | 50.0% | |
| ATGGTTTCTCTGGTGACCTC+TGG | + | chr7_4:48496318-48496337 | None:intergenic | 50.0% | |
| GCTCATCCCAAACAGGAAGA+AGG | + | chr7_4:48496417-48496436 | None:intergenic | 50.0% | |
| TCTGCAAGCTCATCCCAAAC+AGG | + | chr7_4:48496424-48496443 | None:intergenic | 50.0% | |
| ! | TGTTTGGGATGAGCTTGCAG+AGG | - | chr7_4:48496423-48496442 | Msa1159010:CDS | 50.0% |
| GATGAGCTTGCAGAGGAACT+GGG | - | chr7_4:48496430-48496449 | Msa1159010:CDS | 50.0% | |
| ACGTTGCGGTTCAGAGGGAT+GGG | + | chr7_4:48491385-48491404 | None:intergenic | 55.0% | |
| GGAACAAATGGAGAGGAGGG+GGG | + | chr7_4:48492442-48492461 | None:intergenic | 55.0% | |
| GGGAACAAATGGAGAGGAGG+GGG | + | chr7_4:48492443-48492462 | None:intergenic | 55.0% | |
| TCTTCGTGGTAGAAGGGTGG+TGG | + | chr7_4:48492508-48492527 | None:intergenic | 55.0% | |
| GCTTCTTCGTGGTAGAAGGG+TGG | + | chr7_4:48492511-48492530 | None:intergenic | 55.0% | |
| GGAACTCCTTGGACCTGAGA+AGG | - | chr7_4:48492828-48492847 | Msa1159010:intron | 55.0% | |
| !! | AGAGGAGCCTTTTGGGGAAC+TGG | - | chr7_4:48492918-48492937 | Msa1159010:intron | 55.0% |
| !! | GAGGAGCCTTTTGGGGAACT+GGG | - | chr7_4:48492919-48492938 | Msa1159010:intron | 55.0% |
| CCTTCTCCCAGTTCCCCAAA+AGG | + | chr7_4:48492928-48492947 | None:intergenic | 55.0% | |
| !! | CCTTTTGGGGAACTGGGAGA+AGG | - | chr7_4:48492925-48492944 | Msa1159010:intron | 55.0% |
| ! | AATCGGCTAGTTGAGGCCAC+TGG | - | chr7_4:48493006-48493025 | Msa1159010:intron | 55.0% |
| TCAGACAGTCCTGATCCACG+GGG | - | chr7_4:48493066-48493085 | Msa1159010:intron | 55.0% | |
| ! | GGTGGACCACGTGTTAGCTT+TGG | - | chr7_4:48493087-48493106 | Msa1159010:intron | 55.0% |
| ! | AGGGGACGTTGATGGAACCA+TGG | + | chr7_4:48494203-48494222 | None:intergenic | 55.0% |
| !! | GATAGCACAGCACCGGCAAA+GGG | + | chr7_4:48494691-48494710 | None:intergenic | 55.0% |
| !! | TGATAGCACAGCACCGGCAA+AGG | + | chr7_4:48494692-48494711 | None:intergenic | 55.0% |
| TACATTGCTAGGGCTGGGAG+TGG | - | chr7_4:48495906-48495925 | Msa1159010:intron | 55.0% | |
| GGATGAGCTTGCAGAGGAAC+TGG | - | chr7_4:48496429-48496448 | Msa1159010:CDS | 55.0% | |
| CTTGCAGAGGAACTGGGCAT+AGG | - | chr7_4:48496436-48496455 | Msa1159010:CDS | 55.0% | |
| GACGTTGCGGTTCAGAGGGA+TGG | + | chr7_4:48491386-48491405 | None:intergenic | 60.0% | |
| ! | CTTCCAGTGGGGTGCCTTGA+CGG | - | chr7_4:48495316-48495335 | Msa1159010:intron | 60.0% |
| GACAGTCCTGATCCACGGGG+TGG | - | chr7_4:48493069-48493088 | Msa1159010:intron | 65.0% | |
| CTAACACGTGGTCCACCCCG+TGG | + | chr7_4:48493084-48493103 | None:intergenic | 65.0% | |
| TCGCTTGCGGGTCCCTTTGC+CGG | - | chr7_4:48494676-48494695 | Msa1159010:intron | 65.0% | |
| GCACAGACCTGCCACCGTCA+AGG | + | chr7_4:48495333-48495352 | None:intergenic | 65.0% | |
| TGACGGTGGCAGGTCTGTGC+AGG | - | chr7_4:48495333-48495352 | Msa1159010:intron | 65.0% | |
| CGTGGTCCACCCCGTGGATC+AGG | + | chr7_4:48493078-48493097 | None:intergenic | 70.0% | |
| ! | CCACCGTCAAGGCACCCCAC+TGG | + | chr7_4:48495322-48495341 | None:intergenic | 70.0% |
| ! | CCAGTGGGGTGCCTTGACGG+TGG | - | chr7_4:48495319-48495338 | Msa1159010:intron | 70.0% |
| ! | TGGGGTGCCTTGACGGTGGC+AGG | - | chr7_4:48495323-48495342 | Msa1159010:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 48491252 | 48496686 | 48491252 | ID=Msa1159010;Name=Msa1159010 |
| chr7_4 | mRNA | 48491252 | 48496686 | 48491252 | ID=Msa1159010-mRNA-1;Parent=Msa1159010;Name=Msa1159010-mRNA-1;_AED=0.05;_eAED=0.05;_QI=196|1|1|1|1|1|10|209|542 |
| chr7_4 | exon | 48491252 | 48491619 | 48491252 | ID=Msa1159010-mRNA-1:exon:13166;Parent=Msa1159010-mRNA-1 |
| chr7_4 | exon | 48491703 | 48491753 | 48491703 | ID=Msa1159010-mRNA-1:exon:13165;Parent=Msa1159010-mRNA-1 |
| chr7_4 | exon | 48492011 | 48492079 | 48492011 | ID=Msa1159010-mRNA-1:exon:13164;Parent=Msa1159010-mRNA-1 |
| chr7_4 | exon | 48492584 | 48492653 | 48492584 | ID=Msa1159010-mRNA-1:exon:13163;Parent=Msa1159010-mRNA-1 |
| chr7_4 | exon | 48492787 | 48492837 | 48492787 | ID=Msa1159010-mRNA-1:exon:13162;Parent=Msa1159010-mRNA-1 |
| chr7_4 | exon | 48493093 | 48493304 | 48493093 | ID=Msa1159010-mRNA-1:exon:13161;Parent=Msa1159010-mRNA-1 |
| chr7_4 | exon | 48493553 | 48493654 | 48493553 | ID=Msa1159010-mRNA-1:exon:13160;Parent=Msa1159010-mRNA-1 |
| chr7_4 | exon | 48494403 | 48494543 | 48494403 | ID=Msa1159010-mRNA-1:exon:13159;Parent=Msa1159010-mRNA-1 |
| chr7_4 | exon | 48494711 | 48495172 | 48494711 | ID=Msa1159010-mRNA-1:exon:13158;Parent=Msa1159010-mRNA-1 |
| chr7_4 | exon | 48496179 | 48496686 | 48496179 | ID=Msa1159010-mRNA-1:exon:13157;Parent=Msa1159010-mRNA-1 |
| chr7_4 | five_prime_UTR | 48496491 | 48496686 | 48496491 | ID=Msa1159010-mRNA-1:five_prime_utr;Parent=Msa1159010-mRNA-1 |
| chr7_4 | CDS | 48496179 | 48496490 | 48496179 | ID=Msa1159010-mRNA-1:cds;Parent=Msa1159010-mRNA-1 |
| chr7_4 | CDS | 48494711 | 48495172 | 48494711 | ID=Msa1159010-mRNA-1:cds;Parent=Msa1159010-mRNA-1 |
| chr7_4 | CDS | 48494403 | 48494543 | 48494403 | ID=Msa1159010-mRNA-1:cds;Parent=Msa1159010-mRNA-1 |
| chr7_4 | CDS | 48493553 | 48493654 | 48493553 | ID=Msa1159010-mRNA-1:cds;Parent=Msa1159010-mRNA-1 |
| chr7_4 | CDS | 48493093 | 48493304 | 48493093 | ID=Msa1159010-mRNA-1:cds;Parent=Msa1159010-mRNA-1 |
| chr7_4 | CDS | 48492787 | 48492837 | 48492787 | ID=Msa1159010-mRNA-1:cds;Parent=Msa1159010-mRNA-1 |
| chr7_4 | CDS | 48492584 | 48492653 | 48492584 | ID=Msa1159010-mRNA-1:cds;Parent=Msa1159010-mRNA-1 |
| chr7_4 | CDS | 48492011 | 48492079 | 48492011 | ID=Msa1159010-mRNA-1:cds;Parent=Msa1159010-mRNA-1 |
| chr7_4 | CDS | 48491703 | 48491753 | 48491703 | ID=Msa1159010-mRNA-1:cds;Parent=Msa1159010-mRNA-1 |
| chr7_4 | CDS | 48491461 | 48491619 | 48491461 | ID=Msa1159010-mRNA-1:cds;Parent=Msa1159010-mRNA-1 |
| chr7_4 | three_prime_UTR | 48491252 | 48491460 | 48491252 | ID=Msa1159010-mRNA-1:three_prime_utr;Parent=Msa1159010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
