Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066850 | sp|Q8VYD8|ORLIK_ARATH | 68.874 | 302 | 88 | 3 | 10 | 306 | 15 | 315 | 3.67e-143 | 409 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066850 | A0A072VK52 | 98.039 | 306 | 5 | 1 | 1 | 306 | 1 | 305 | 0.0 | 610 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006050 | Msa0066850 | 0.827389 | 1.607199e-54 | -8.615850e-47 |
| Msa0008250 | Msa0066850 | 0.815243 | 1.021669e-51 | -8.615850e-47 |
| Msa0009800 | Msa0066850 | 0.823066 | 1.691379e-53 | -8.615850e-47 |
| Msa0009890 | Msa0066850 | 0.811798 | 5.847160e-51 | -8.615850e-47 |
| Msa0013810 | Msa0066850 | 0.825272 | 5.132557e-54 | -8.615850e-47 |
| Msa0017420 | Msa0066850 | 0.804837 | 1.783555e-49 | -8.615850e-47 |
| Msa0024330 | Msa0066850 | 0.891107 | 5.369100e-74 | -8.615850e-47 |
| Msa0028950 | Msa0066850 | 0.834345 | 3.162941e-56 | -8.615850e-47 |
| Msa0030400 | Msa0066850 | 0.851990 | 6.191005e-61 | -8.615850e-47 |
| Msa0034340 | Msa0066850 | 0.822823 | 1.927426e-53 | -8.615850e-47 |
| Msa0044320 | Msa0066850 | 0.804520 | 2.077091e-49 | -8.615850e-47 |
| Msa0044380 | Msa0066850 | 0.817011 | 4.113788e-52 | -8.615850e-47 |
| Msa0045660 | Msa0066850 | 0.836124 | 1.124246e-56 | -8.615850e-47 |
| Msa0046360 | Msa0066850 | 0.818000 | 2.463110e-52 | -8.615850e-47 |
| Msa0047470 | Msa0066850 | 0.827255 | 1.730315e-54 | -8.615850e-47 |
| Msa0052550 | Msa0066850 | 0.809734 | 1.634592e-50 | -8.615850e-47 |
| Msa0056130 | Msa0066850 | 0.810875 | 9.273581e-51 | -8.615850e-47 |
| Msa0056160 | Msa0066850 | 0.818867 | 1.566205e-52 | -8.615850e-47 |
| Msa0061320 | Msa0066850 | 0.814897 | 1.219234e-51 | -8.615850e-47 |
| Msa0065690 | Msa0066850 | 0.824961 | 6.078325e-54 | -8.615850e-47 |
| Msa0066850 | Msa0090760 | 0.811808 | 5.816616e-51 | -8.615850e-47 |
| Msa0066850 | Msa0091340 | 0.831136 | 1.980486e-55 | -8.615850e-47 |
| Msa0066850 | Msa0094670 | 0.830912 | 2.247454e-55 | -8.615850e-47 |
| Msa0066850 | Msa0094970 | 0.801649 | 8.148903e-49 | -8.615850e-47 |
| Msa0066850 | Msa0097730 | 0.800175 | 1.630616e-48 | -8.615850e-47 |
| Msa0066850 | Msa0105210 | 0.805850 | 1.094034e-49 | -8.615850e-47 |
| Msa0066850 | Msa0115010 | 0.819617 | 1.056971e-52 | -8.615850e-47 |
| Msa0066850 | Msa0120120 | 0.819875 | 9.230146e-53 | -8.615850e-47 |
| Msa0066850 | Msa0120180 | 0.820937 | 5.268253e-53 | -8.615850e-47 |
| Msa0066850 | Msa0120980 | 0.813681 | 2.263184e-51 | -8.615850e-47 |
| Msa0066850 | Msa0131390 | 0.821252 | 4.457302e-53 | -8.615850e-47 |
| Msa0066850 | Msa0138800 | 0.811974 | 5.351373e-51 | -8.615850e-47 |
| Msa0066850 | Msa0146180 | 0.818689 | 1.719731e-52 | -8.615850e-47 |
| Msa0066850 | Msa0147990 | 0.812001 | 5.280828e-51 | -8.615850e-47 |
| Msa0066850 | Msa0163410 | 0.896276 | 4.308121e-76 | -8.615850e-47 |
| Msa0066850 | Msa0168960 | 0.835088 | 2.056677e-56 | -8.615850e-47 |
| Msa0066850 | Msa0171920 | 0.800318 | 1.524707e-48 | -8.615850e-47 |
| Msa0066850 | Msa0173280 | 0.807052 | 6.100613e-50 | -8.615850e-47 |
| Msa0066850 | Msa0173760 | 0.860350 | 2.195904e-63 | -8.615850e-47 |
| Msa0066850 | Msa0173850 | 0.838514 | 2.749244e-57 | -8.615850e-47 |
| Msa0066850 | Msa0177490 | 0.818782 | 1.637735e-52 | -8.615850e-47 |
| Msa0066850 | Msa0181010 | 0.823129 | 1.635863e-53 | -8.615850e-47 |
| Msa0066850 | Msa0181020 | 0.861348 | 1.092983e-63 | -8.615850e-47 |
| Msa0066850 | Msa0183490 | 0.810670 | 1.027207e-50 | -8.615850e-47 |
| Msa0066850 | Msa0206940 | 0.831890 | 1.291364e-55 | -8.615850e-47 |
| Msa0066850 | Msa0213020 | 0.856319 | 3.487374e-62 | -8.615850e-47 |
| Msa0066850 | Msa0216790 | 0.810021 | 1.417809e-50 | -8.615850e-47 |
| Msa0066850 | Msa0226800 | 0.849706 | 2.721329e-60 | -8.615850e-47 |
| Msa0066850 | Msa0228080 | 0.820209 | 7.739147e-53 | -8.615850e-47 |
| Msa0066850 | Msa0235180 | 0.805015 | 1.637149e-49 | -8.615850e-47 |
| Msa0066850 | Msa0250520 | 0.850267 | 1.896467e-60 | -8.615850e-47 |
| Msa0066850 | Msa0258380 | 0.810586 | 1.070594e-50 | -8.615850e-47 |
| Msa0066850 | Msa0269430 | 0.807656 | 4.544365e-50 | -8.615850e-47 |
| Msa0066850 | Msa0282860 | 0.805077 | 1.588545e-49 | -8.615850e-47 |
| Msa0066850 | Msa0292860 | 0.804992 | 1.654753e-49 | -8.615850e-47 |
| Msa0066850 | Msa0311570 | 0.830631 | 2.634500e-55 | -8.615850e-47 |
| Msa0066850 | Msa0313800 | 0.803622 | 3.193273e-49 | -8.615850e-47 |
| Msa0066850 | Msa0315010 | 0.801229 | 9.935475e-49 | -8.615850e-47 |
| Msa0066850 | Msa0327900 | 0.839310 | 1.710609e-57 | -8.615850e-47 |
| Msa0066850 | Msa0354490 | 0.834642 | 2.664289e-56 | -8.615850e-47 |
| Msa0066850 | Msa0379090 | 0.809998 | 1.434094e-50 | -8.615850e-47 |
| Msa0066850 | Msa0380360 | 0.805944 | 1.045140e-49 | -8.615850e-47 |
| Msa0066850 | Msa0387120 | 0.807015 | 6.213197e-50 | -8.615850e-47 |
| Msa0066850 | Msa0387790 | 0.803609 | 3.212507e-49 | -8.615850e-47 |
| Msa0066850 | Msa0393140 | 0.822360 | 2.469391e-53 | -8.615850e-47 |
| Msa0066850 | Msa0397040 | 0.806457 | 8.149589e-50 | -8.615850e-47 |
| Msa0066850 | Msa0400900 | 0.816565 | 5.179111e-52 | -8.615850e-47 |
| Msa0066850 | Msa0417150 | 0.802671 | 5.023056e-49 | -8.615850e-47 |
| Msa0066850 | Msa0419040 | 0.804808 | 1.808555e-49 | -8.615850e-47 |
| Msa0066850 | Msa0420800 | 0.801700 | 7.955829e-49 | -8.615850e-47 |
| Msa0066850 | Msa0426480 | 0.856248 | 3.657464e-62 | -8.615850e-47 |
| Msa0066850 | Msa0434630 | 0.800023 | 1.750171e-48 | -8.615850e-47 |
| Msa0066850 | Msa0438460 | 0.807154 | 5.804663e-50 | -8.615850e-47 |
| Msa0066850 | Msa0444310 | 0.819639 | 1.045223e-52 | -8.615850e-47 |
| Msa0066850 | Msa0448520 | 0.836106 | 1.136733e-56 | -8.615850e-47 |
| Msa0066850 | Msa0467080 | 0.816411 | 5.606758e-52 | -8.615850e-47 |
| Msa0066850 | Msa0471890 | 0.815835 | 7.542783e-52 | -8.615850e-47 |
| Msa0066850 | Msa0473010 | 0.813107 | 3.026390e-51 | -8.615850e-47 |
| Msa0066850 | Msa0473490 | 0.804243 | 2.372364e-49 | -8.615850e-47 |
| Msa0066850 | Msa0475740 | 0.813269 | 2.787380e-51 | -8.615850e-47 |
| Msa0066850 | Msa0476180 | 0.813745 | 2.190674e-51 | -8.615850e-47 |
| Msa0066850 | Msa0476820 | 0.804814 | 1.802786e-49 | -8.615850e-47 |
| Msa0066850 | Msa0489620 | 0.807507 | 4.886063e-50 | -8.615850e-47 |
| Msa0066850 | Msa0495510 | 0.824729 | 6.893597e-54 | -8.615850e-47 |
| Msa0066850 | Msa0512310 | 0.815761 | 7.833369e-52 | -8.615850e-47 |
| Msa0066850 | Msa0515680 | 0.806213 | 9.173963e-50 | -8.615850e-47 |
| Msa0066850 | Msa0517190 | 0.811476 | 6.870257e-51 | -8.615850e-47 |
| Msa0066850 | Msa0528170 | 0.800654 | 1.302199e-48 | -8.615850e-47 |
| Msa0066850 | Msa0528740 | 0.831763 | 1.388160e-55 | -8.615850e-47 |
| Msa0066850 | Msa0533140 | 0.814357 | 1.605642e-51 | -8.615850e-47 |
| Msa0066850 | Msa0534380 | 0.804513 | 2.083367e-49 | -8.615850e-47 |
| Msa0066850 | Msa0539320 | 0.825297 | 5.061268e-54 | -8.615850e-47 |
| Msa0066850 | Msa0541220 | 0.803301 | 3.722222e-49 | -8.615850e-47 |
| Msa0066850 | Msa0542040 | 0.813466 | 2.524050e-51 | -8.615850e-47 |
| Msa0066850 | Msa0545230 | 0.802521 | 5.393551e-49 | -8.615850e-47 |
| Msa0066850 | Msa0549740 | 0.825215 | 5.292754e-54 | -8.615850e-47 |
| Msa0066850 | Msa0553350 | 0.838148 | 3.415595e-57 | -8.615850e-47 |
| Msa0066850 | Msa0553520 | 0.808892 | 2.477635e-50 | -8.615850e-47 |
| Msa0066850 | Msa0555980 | 0.818678 | 1.728860e-52 | -8.615850e-47 |
| Msa0066850 | Msa0579610 | 0.835413 | 1.702682e-56 | -8.615850e-47 |
| Msa0066850 | Msa0581490 | 0.800486 | 1.409350e-48 | -8.615850e-47 |
| Msa0066850 | Msa0587900 | 0.813593 | 2.366823e-51 | -8.615850e-47 |
| Msa0066850 | Msa0589540 | 0.805660 | 1.199157e-49 | -8.615850e-47 |
| Msa0066850 | Msa0600820 | 0.801076 | 1.068022e-48 | -8.615850e-47 |
| Msa0066850 | Msa0612730 | 0.866635 | 2.468789e-65 | -8.615850e-47 |
| Msa0066850 | Msa0615850 | 0.852423 | 4.661564e-61 | -8.615850e-47 |
| Msa0066850 | Msa0622690 | 0.821497 | 3.912508e-53 | -8.615850e-47 |
| Msa0066850 | Msa0623270 | 0.842385 | 2.670439e-58 | -8.615850e-47 |
| Msa0066850 | Msa0625330 | 0.810202 | 1.295800e-50 | -8.615850e-47 |
| Msa0066850 | Msa0628060 | 0.803366 | 3.608120e-49 | -8.615850e-47 |
| Msa0066850 | Msa0635130 | 0.829227 | 5.792851e-55 | -8.615850e-47 |
| Msa0066850 | Msa0645040 | 0.805071 | 1.593064e-49 | -8.615850e-47 |
| Msa0066850 | Msa0647710 | 0.828218 | 1.015602e-54 | -8.615850e-47 |
| Msa0066850 | Msa0648630 | 0.807468 | 4.980890e-50 | -8.615850e-47 |
| Msa0066850 | Msa0650360 | 0.833191 | 6.144275e-56 | -8.615850e-47 |
| Msa0066850 | Msa0657300 | 0.810310 | 1.228474e-50 | -8.615850e-47 |
| Msa0066850 | Msa0672350 | 0.806559 | 7.755140e-50 | -8.615850e-47 |
| Msa0066850 | Msa0675790 | 0.811479 | 6.860115e-51 | -8.615850e-47 |
| Msa0066850 | Msa0677040 | 0.814342 | 1.617544e-51 | -8.615850e-47 |
| Msa0066850 | Msa0679780 | 0.818241 | 2.171931e-52 | -8.615850e-47 |
| Msa0066850 | Msa0688760 | 0.805058 | 1.603668e-49 | -8.615850e-47 |
| Msa0066850 | Msa0690530 | 0.828047 | 1.117085e-54 | -8.615850e-47 |
| Msa0066850 | Msa0692910 | 0.821291 | 4.365326e-53 | -8.615850e-47 |
| Msa0066850 | Msa0698900 | 0.844332 | 8.070745e-59 | -8.615850e-47 |
| Msa0066850 | Msa0702070 | 0.817708 | 2.866981e-52 | -8.615850e-47 |
| Msa0066850 | Msa0702120 | 0.826080 | 3.301425e-54 | -8.615850e-47 |
| Msa0066850 | Msa0704570 | 0.802057 | 6.720492e-49 | -8.615850e-47 |
| Msa0066850 | Msa0720380 | 0.801128 | 1.042065e-48 | -8.615850e-47 |
| Msa0066850 | Msa0734760 | 0.813300 | 2.744868e-51 | -8.615850e-47 |
| Msa0066850 | Msa0760950 | 0.850600 | 1.528782e-60 | -8.615850e-47 |
| Msa0066850 | Msa0789800 | 0.850645 | 1.485426e-60 | -8.615850e-47 |
| Msa0066850 | Msa0813630 | 0.819111 | 1.378960e-52 | -8.615850e-47 |
| Msa0066850 | Msa0829110 | 0.808903 | 2.464268e-50 | -8.615850e-47 |
| Msa0066850 | Msa0829430 | 0.803535 | 3.328589e-49 | -8.615850e-47 |
| Msa0066850 | Msa0829570 | 0.833199 | 6.118442e-56 | -8.615850e-47 |
| Msa0066850 | Msa0833630 | 0.802858 | 4.594390e-49 | -8.615850e-47 |
| Msa0066850 | Msa0840890 | 0.800927 | 1.145392e-48 | -8.615850e-47 |
| Msa0066850 | Msa0868040 | 0.802866 | 4.577907e-49 | -8.615850e-47 |
| Msa0066850 | Msa0873830 | 0.815454 | 9.170973e-52 | -8.615850e-47 |
| Msa0066850 | Msa0881050 | 0.818486 | 1.911842e-52 | -8.615850e-47 |
| Msa0066850 | Msa0899700 | 0.805365 | 1.382663e-49 | -8.615850e-47 |
| Msa0066850 | Msa0901140 | 0.809998 | 1.433839e-50 | -8.615850e-47 |
| Msa0066850 | Msa0929400 | 0.820967 | 5.185551e-53 | -8.615850e-47 |
| Msa0066850 | Msa0931730 | 0.804051 | 2.600354e-49 | -8.615850e-47 |
| Msa0066850 | Msa0934830 | 0.839626 | 1.416108e-57 | -8.615850e-47 |
| Msa0066850 | Msa0938370 | 0.807378 | 5.204290e-50 | -8.615850e-47 |
| Msa0066850 | Msa0966410 | 0.818070 | 2.375038e-52 | -8.615850e-47 |
| Msa0066850 | Msa0967670 | 0.823869 | 1.098113e-53 | -8.615850e-47 |
| Msa0066850 | Msa0971860 | 0.804739 | 1.869504e-49 | -8.615850e-47 |
| Msa0066850 | Msa0975080 | 0.838136 | 3.439080e-57 | -8.615850e-47 |
| Msa0066850 | Msa1029430 | 0.810002 | 1.431310e-50 | -8.615850e-47 |
| Msa0066850 | Msa1030440 | 0.805176 | 1.514807e-49 | -8.615850e-47 |
| Msa0066850 | Msa1039860 | 0.838218 | 3.277358e-57 | -8.615850e-47 |
| Msa0066850 | Msa1040390 | 0.817422 | 3.325810e-52 | -8.615850e-47 |
| Msa0066850 | Msa1044790 | 0.826116 | 3.235582e-54 | -8.615850e-47 |
| Msa0066850 | Msa1054890 | 0.822111 | 2.821816e-53 | -8.615850e-47 |
| Msa0066850 | Msa1061520 | 0.802516 | 5.406409e-49 | -8.615850e-47 |
| Msa0066850 | Msa1069440 | 0.827390 | 1.606313e-54 | -8.615850e-47 |
| Msa0066850 | Msa1081850 | 0.841818 | 3.772389e-58 | -8.615850e-47 |
| Msa0066850 | Msa1082150 | 0.810409 | 1.169442e-50 | -8.615850e-47 |
| Msa0066850 | Msa1084210 | 0.804987 | 1.659138e-49 | -8.615850e-47 |
| Msa0066850 | Msa1109500 | 0.814304 | 1.649406e-51 | -8.615850e-47 |
| Msa0066850 | Msa1117830 | 0.828155 | 1.052130e-54 | -8.615850e-47 |
| Msa0066850 | Msa1130070 | 0.803178 | 3.945569e-49 | -8.615850e-47 |
| Msa0066850 | Msa1130730 | 0.835109 | 2.031264e-56 | -8.615850e-47 |
| Msa0066850 | Msa1144420 | 0.808214 | 3.457130e-50 | -8.615850e-47 |
| Msa0066850 | Msa1145370 | 0.838040 | 3.641132e-57 | -8.615850e-47 |
| Msa0066850 | Msa1150130 | 0.805382 | 1.371177e-49 | -8.615850e-47 |
| Msa0066850 | Msa1157310 | 0.848458 | 6.050100e-60 | -8.615850e-47 |
| Msa0066850 | Msa1159010 | 0.826636 | 2.433672e-54 | -8.615850e-47 |
| Msa0066850 | Msa1161760 | 0.801596 | 8.355030e-49 | -8.615850e-47 |
| Msa0066850 | Msa1165810 | 0.800047 | 1.730681e-48 | -8.615850e-47 |
| Msa0066850 | Msa1173380 | 0.800533 | 1.378084e-48 | -8.615850e-47 |
| Msa0066850 | Msa1191390 | 0.843540 | 1.315619e-58 | -8.615850e-47 |
| Msa0066850 | Msa1193680 | 0.815705 | 8.062832e-52 | -8.615850e-47 |
| Msa0066850 | Msa1221540 | 0.807514 | 4.869665e-50 | -8.615850e-47 |
| Msa0066850 | Msa1222390 | 0.825740 | 3.974667e-54 | -8.615850e-47 |
| Msa0066850 | Msa1222580 | 0.801023 | 1.094630e-48 | -8.615850e-47 |
| Msa0066850 | Msa1228880 | 0.855344 | 6.720055e-62 | -8.615850e-47 |
| Msa0066850 | Msa1238700 | 0.868563 | 5.949621e-66 | -8.615850e-47 |
| Msa0066850 | Msa1277830 | 0.830425 | 2.957530e-55 | -8.615850e-47 |
| Msa0066850 | Msa1277930 | 0.808068 | 3.714489e-50 | -8.615850e-47 |
| Msa0066850 | Msa1280020 | 0.813311 | 2.728880e-51 | -8.615850e-47 |
| Msa0066850 | Msa1292620 | 0.806280 | 8.879669e-50 | -8.615850e-47 |
| Msa0066850 | Msa1293530 | 0.803881 | 2.820790e-49 | -8.615850e-47 |
| Msa0066850 | Msa1299160 | 0.805447 | 1.329319e-49 | -8.615850e-47 |
| Msa0066850 | Msa1309100 | 0.831129 | 1.988087e-55 | -8.615850e-47 |
| Msa0066850 | Msa1316720 | 0.867873 | 9.926820e-66 | -8.615850e-47 |
| Msa0066850 | Msa1326000 | 0.820293 | 7.403754e-53 | -8.615850e-47 |
| Msa0066850 | Msa1334020 | 0.813708 | 2.231884e-51 | -8.615850e-47 |
| Msa0066850 | Msa1334650 | 0.803988 | 2.679885e-49 | -8.615850e-47 |
| Msa0066850 | Msa1341790 | 0.801599 | 8.345099e-49 | -8.615850e-47 |
| Msa0066850 | Msa1345120 | 0.802863 | 4.585163e-49 | -8.615850e-47 |
| Msa0066850 | Msa1348770 | 0.800840 | 1.193524e-48 | -8.615850e-47 |
| Msa0066850 | Msa1365120 | 0.824555 | 7.576641e-54 | -8.615850e-47 |
| Msa0066850 | Msa1368800 | 0.805888 | 1.074081e-49 | -8.615850e-47 |
| Msa0066850 | Msa1371840 | 0.829085 | 6.268576e-55 | -8.615850e-47 |
| Msa0066850 | Msa1374850 | 0.810158 | 1.324465e-50 | -8.615850e-47 |
| Msa0066850 | Msa1378840 | 0.816533 | 5.264989e-52 | -8.615850e-47 |
| Msa0066850 | Msa1380720 | 0.822396 | 2.422073e-53 | -8.615850e-47 |
| Msa0066850 | Msa1392680 | 0.817083 | 3.963807e-52 | -8.615850e-47 |
| Msa0066850 | Msa1393720 | 0.821092 | 4.852854e-53 | -8.615850e-47 |
| Msa0066850 | Msa1397110 | 0.806736 | 7.115643e-50 | -8.615850e-47 |
| Msa0066850 | Msa1403900 | 0.805204 | 1.494709e-49 | -8.615850e-47 |
| Msa0066850 | Msa1406550 | 0.816905 | 4.345088e-52 | -8.615850e-47 |
| Msa0066850 | Msa1422490 | 0.806461 | 8.132710e-50 | -8.615850e-47 |
| Msa0066850 | Msa1422500 | 0.838483 | 2.800572e-57 | -8.615850e-47 |
| Msa0066850 | Msa1423190 | 0.812627 | 3.855425e-51 | -8.615850e-47 |
| Msa0066850 | Msa1430760 | 0.802059 | 6.714889e-49 | -8.615850e-47 |
| Msa0066850 | Msa1432350 | 0.804229 | 2.388219e-49 | -8.615850e-47 |
| Msa0066850 | Msa1439800 | 0.801967 | 7.011369e-49 | -8.615850e-47 |
| Msa0066850 | Msa1440180 | 0.840065 | 1.087960e-57 | -8.615850e-47 |
| Msa0066850 | Msa1440980 | 0.802148 | 6.436483e-49 | -8.615850e-47 |
| Msa0066850 | Msa1449740 | 0.838997 | 2.061514e-57 | -8.615850e-47 |
| Msa0066850 | Msa1458330 | 0.802204 | 6.269706e-49 | -8.615850e-47 |
| Msa0066850 | Msa1458920 | 0.808488 | 3.021559e-50 | -8.615850e-47 |
| Msa0066850 | Msa1459260 | 0.812492 | 4.126542e-51 | -8.615850e-47 |
| Msa0066850 | Msa1459590 | 0.803226 | 3.857751e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066850 | MtrunA17_Chr1g0178361 | 98.039 | 306 | 5 | 1 | 1 | 306 | 1 | 305 | 0.0 | 610 |
| Msa0066850 | MtrunA17_Chr4g0017941 | 69.231 | 247 | 74 | 1 | 60 | 306 | 68 | 312 | 1.21e-124 | 358 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0066850 | AT5G06130.2 | 68.874 | 302 | 88 | 3 | 10 | 306 | 15 | 315 | 3.73e-144 | 409 |
| Msa0066850 | AT5G06130.1 | 77.155 | 232 | 52 | 1 | 75 | 306 | 1 | 231 | 1.19e-129 | 369 |
| Msa0066850 | AT5G61670.2 | 69.880 | 249 | 73 | 1 | 58 | 306 | 61 | 307 | 6.62e-125 | 359 |
| Msa0066850 | AT5G61670.1 | 69.880 | 249 | 73 | 1 | 58 | 306 | 61 | 307 | 6.62e-125 | 359 |
Find 81 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAACAAAATCTTTCTTCTTA+TGG | 0.172110 | 1_2:-30960511 | Msa0066850:CDS |
| ATATCTGCAATAATTGTATT+TGG | 0.197063 | 1_2:-30959586 | Msa0066850:CDS |
| ATGGCAGCTGGAGCTGAAAT+TGG | 0.211679 | 1_2:-30958351 | Msa0066850:intron |
| GGAATAGATGATGGAATTTC+CGG | 0.218058 | 1_2:+30959978 | None:intergenic |
| TTTGAACATTAATCCGATTT+CGG | 0.296746 | 1_2:-30957855 | Msa0066850:CDS |
| TTTCCAGCACCAGAGCAATT+TGG | 0.301546 | 1_2:+30957782 | None:intergenic |
| TTTAAAAGGGGCAAAGAAAA+TGG | 0.310012 | 1_2:+30960812 | None:intergenic |
| AATTATATTCAGTGTCAATA+TGG | 0.322985 | 1_2:+30957406 | None:intergenic |
| TGCATTTGCCTTTGCAACTA+AGG | 0.340206 | 1_2:-30958289 | Msa0066850:intron |
| TAACTTTGGTGTGATTTCAT+TGG | 0.363903 | 1_2:+30960716 | None:intergenic |
| AGAGAAAGTATTCATTGGTT+TGG | 0.367720 | 1_2:+30960878 | None:intergenic |
| GGCAAATTGTTTGCCCTTGA+AGG | 0.375190 | 1_2:-30961072 | None:intergenic |
| CCCGAAAAGGATGCCACAAT+TGG | 0.377796 | 1_2:+30958126 | None:intergenic |
| TGTCCAACCTGCCTTTGCAC+TGG | 0.394247 | 1_2:-30957649 | Msa0066850:CDS |
| ATTAATCCGATTTCGGCATC+TGG | 0.402233 | 1_2:-30957848 | Msa0066850:CDS |
| CTATTGTCTGTTGTGTTGTT+CGG | 0.403463 | 1_2:-30960979 | Msa0066850:five_prime_UTR |
| GAAGGAGAGAAAGTATTCAT+TGG | 0.405939 | 1_2:+30960873 | None:intergenic |
| TTGAAGAAGCTCTATCTAAC+AGG | 0.406814 | 1_2:-30959619 | Msa0066850:CDS |
| ACAAAATCCTGAACCGTCTC+TGG | 0.410773 | 1_2:+30960579 | None:intergenic |
| TAGAATCATTGTATTGTGAA+TGG | 0.414621 | 1_2:+30960920 | None:intergenic |
| TGAAGGGCCAGAGACGGTTC+AGG | 0.418010 | 1_2:-30960586 | Msa0066850:CDS |
| TTTGGACACCTTGTCGTTGT+AGG | 0.425866 | 1_2:+30957800 | None:intergenic |
| ATGGAACTAGGACAGAATTC+TGG | 0.437091 | 1_2:+30957425 | None:intergenic |
| GAAGTACCAGATGCCGAAAT+CGG | 0.441052 | 1_2:+30957842 | None:intergenic |
| TTCAGTACTGATGTTAATTG+AGG | 0.445259 | 1_2:-30958085 | Msa0066850:CDS |
| TGTCCAAATTGCTCTGGTGC+TGG | 0.448257 | 1_2:-30957785 | Msa0066850:CDS |
| TAGAGCTTCTTCAAAGTGTT+GGG | 0.450361 | 1_2:+30959628 | None:intergenic |
| CTGGAGCTGAAATTGGGTAT+AGG | 0.452466 | 1_2:-30958344 | Msa0066850:CDS |
| CTCACCACGTGAGGAAGAAA+AGG | 0.455200 | 1_2:+30959957 | None:intergenic |
| AGTCAAATGGATCAATTCTC+AGG | 0.456133 | 1_2:+30957602 | None:intergenic |
| AATCTTTCTTCTTATGGAAG+AGG | 0.457917 | 1_2:-30960505 | Msa0066850:intron |
| TGCTCTTCTCCACAGGATGC+AGG | 0.457995 | 1_2:-30960741 | Msa0066850:CDS |
| TGCAAGTATTGCCTTGGAAC+TGG | 0.458275 | 1_2:-30958030 | Msa0066850:intron |
| TACTTCTGTTAGACCCCTGC+AGG | 0.461988 | 1_2:-30957825 | Msa0066850:CDS |
| CATGTAAAGAATTAGTCAAA+TGG | 0.467029 | 1_2:+30957589 | None:intergenic |
| TTATGGGATAGTGTCCTTCA+AGG | 0.476073 | 1_2:+30961058 | None:intergenic |
| ATAGAGCTTCTTCAAAGTGT+TGG | 0.477201 | 1_2:+30959627 | None:intergenic |
| CTGCAATAATTGTATTTGGC+GGG | 0.477772 | 1_2:-30959582 | Msa0066850:CDS |
| AGCTATGAATGGTGGAAAGT+GGG | 0.478179 | 1_2:+30960947 | None:intergenic |
| CAGGTTACTTGGCTTGCGCT+CGG | 0.481171 | 1_2:-30957898 | Msa0066850:CDS |
| GTCCAACCTGCCTTTGCACT+GGG | 0.482552 | 1_2:-30957648 | Msa0066850:CDS |
| GCCAACTGCTCCACCCGAAA+AGG | 0.487934 | 1_2:+30958113 | None:intergenic |
| TGGCAGCTGGAGCTGAAATT+GGG | 0.494726 | 1_2:-30958350 | Msa0066850:intron |
| TATAGGTGGCACGTCATATG+AGG | 0.498079 | 1_2:-30958327 | Msa0066850:CDS |
| TAGCTATGAATGGTGGAAAG+TGG | 0.506702 | 1_2:+30960946 | None:intergenic |
| TTGTCGTTGTAGGAACCTGC+AGG | 0.508146 | 1_2:+30957810 | None:intergenic |
| AAAGGTAGAATTGTGGAGGA+AGG | 0.517842 | 1_2:+30960855 | None:intergenic |
| CCGAAAAGGATGCCACAATT+GGG | 0.520908 | 1_2:+30958127 | None:intergenic |
| GGAAGAAAAGGAATAGATGA+TGG | 0.521082 | 1_2:+30959969 | None:intergenic |
| ACAAGGTGCAAGTATTGCCT+TGG | 0.523158 | 1_2:-30958036 | Msa0066850:CDS |
| TGCGCTCGGTGTTCCACAAG+TGG | 0.528281 | 1_2:-30957884 | Msa0066850:CDS |
| AATTGCGTGCTCTTCTCCAC+AGG | 0.533626 | 1_2:-30960748 | Msa0066850:CDS |
| ACAAGGTGTCCAAATTGCTC+TGG | 0.537901 | 1_2:-30957791 | Msa0066850:CDS |
| GTTCAAACATACACCACTTG+TGG | 0.537962 | 1_2:+30957871 | None:intergenic |
| TATGGGATAGTGTCCTTCAA+GGG | 0.540820 | 1_2:+30961059 | None:intergenic |
| ACAACAGACAATAGCAGCTA+AGG | 0.549190 | 1_2:+30960988 | None:intergenic |
| CTTCATCCCAGTGCAAAGGC+AGG | 0.549940 | 1_2:+30957642 | None:intergenic |
| AAATTGCTCTGGTGCTGGAA+AGG | 0.553692 | 1_2:-30957780 | Msa0066850:intron |
| GGAAGATGCAAATGAGATGC+CGG | 0.556353 | 1_2:-30959997 | Msa0066850:CDS |
| TCTGCAATAATTGTATTTGG+CGG | 0.560108 | 1_2:-30959583 | Msa0066850:CDS |
| GGAGATTGCGTGTGCAGCAG+CGG | 0.563072 | 1_2:-30960058 | Msa0066850:CDS |
| ATAGCATACCTTAGTTGCAA+AGG | 0.566228 | 1_2:+30958281 | None:intergenic |
| TGAAGGGAAAGGTAGAATTG+TGG | 0.569401 | 1_2:+30960848 | None:intergenic |
| ATCCCAGTGCAAAGGCAGGT+TGG | 0.571963 | 1_2:+30957646 | None:intergenic |
| TGTCGTTGTAGGAACCTGCA+GGG | 0.577519 | 1_2:+30957811 | None:intergenic |
| TGAATGGAATTAGCTATGAA+TGG | 0.579328 | 1_2:+30960936 | None:intergenic |
| AACTAGGACAGAATTCTGGC+AGG | 0.584086 | 1_2:+30957429 | None:intergenic |
| TTCAGTGTCAATATGGAACT+AGG | 0.585120 | 1_2:+30957413 | None:intergenic |
| CATTATTGAAGGGCCAGAGA+CGG | 0.585450 | 1_2:-30960592 | Msa0066850:CDS |
| CAGTCAAGTTGACCCAATTG+TGG | 0.589524 | 1_2:-30958139 | Msa0066850:CDS |
| GAGCTGAAATTGGGTATAGG+TGG | 0.607211 | 1_2:-30958341 | Msa0066850:CDS |
| CCTTTGCACTGGGATGAAGA+TGG | 0.608589 | 1_2:-30957638 | Msa0066850:CDS |
| TCATTGGAGCCTGCATCCTG+TGG | 0.609087 | 1_2:+30960732 | None:intergenic |
| AGGGAAAGGTAGAATTGTGG+AGG | 0.616825 | 1_2:+30960851 | None:intergenic |
| TGGCGGGCTTATTGCACCGA+CGG | 0.621713 | 1_2:-30959566 | Msa0066850:intron |
| CCATCTTCATCCCAGTGCAA+AGG | 0.623251 | 1_2:+30957638 | None:intergenic |
| TTGAGCAACAAGAGAAAACA+AGG | 0.624269 | 1_2:-30958053 | Msa0066850:CDS |
| ATGGAATTAGCTATGAATGG+TGG | 0.629375 | 1_2:+30960939 | None:intergenic |
| GTAGAAACATACCAGTTCCA+AGG | 0.632023 | 1_2:+30958019 | None:intergenic |
| GTCGTTGTAGGAACCTGCAG+GGG | 0.684640 | 1_2:+30957812 | None:intergenic |
| TGCAGGTTCCTACAACGACA+AGG | 0.684689 | 1_2:-30957808 | Msa0066850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAAAAAATACTTTTTTTAT+GGG | + | chr1_2:30957394-30957413 | None:intergenic | 10.0% |
| !!! | TCAAAAAAATACTTTTTTTA+TGG | + | chr1_2:30957395-30957414 | None:intergenic | 10.0% |
| !!! | TAAATTAATACTAAATTTTG+AGG | + | chr1_2:30960926-30960945 | None:intergenic | 10.0% |
| !! | AAACAAAATAAAAATGAATA+AGG | - | chr1_2:30960951-30960970 | Msa0066850:five_prime_UTR | 10.0% |
| !!! | TTAGTTTTTTTTTGCTTATT+GGG | - | chr1_2:30957737-30957756 | Msa0066850:intron | 15.0% |
| !!! | TTTTGAATAACTTATGAAAA+CGG | + | chr1_2:30958227-30958246 | None:intergenic | 15.0% |
| !!! | AATTGTGACAATTTAAATTT+TGG | - | chr1_2:30959474-30959493 | Msa0066850:intron | 15.0% |
| !!! | ATTGTGACAATTTAAATTTT+GGG | - | chr1_2:30959475-30959494 | Msa0066850:intron | 15.0% |
| !! | ATTATAGAAAATAGCATAAA+GGG | + | chr1_2:30959604-30959623 | None:intergenic | 15.0% |
| !! | AATTATAGAAAATAGCATAA+AGG | + | chr1_2:30959605-30959624 | None:intergenic | 15.0% |
| !!! | ATAAAAAGTTTTTGAAATCA+AGG | + | chr1_2:30959695-30959714 | None:intergenic | 15.0% |
| !!! | ATGTTAATGATTAATTTGTT+AGG | - | chr1_2:30959729-30959748 | Msa0066850:intron | 15.0% |
| !!! | TTATTTACCTTTAATTTAAG+TGG | - | chr1_2:30959955-30959974 | Msa0066850:intron | 15.0% |
| !!! | ATATTGAATCCTTATTTTAA+TGG | - | chr1_2:30960063-30960082 | Msa0066850:CDS | 15.0% |
| !!! | ATATGTGTTTTTTTTTGTTT+AGG | - | chr1_2:30960756-30960775 | Msa0066850:CDS | 15.0% |
| !! | ATAAAAATGAATAAGGAATT+AGG | - | chr1_2:30960958-30960977 | Msa0066850:five_prime_UTR | 15.0% |
| !! | TTGACTTAGAAAAAGAAAAT+TGG | + | chr1_2:30957661-30957680 | None:intergenic | 20.0% |
| !!! | AATTTTCTTTTTCTAAGTCA+AGG | - | chr1_2:30957660-30957679 | Msa0066850:intron | 20.0% |
| !! | AAGCAAAAAAAAACTAACTT+TGG | + | chr1_2:30957734-30957753 | None:intergenic | 20.0% |
| !!! | GTTAGTTTTTTTTTGCTTAT+TGG | - | chr1_2:30957736-30957755 | Msa0066850:intron | 20.0% |
| !!! | GTCAATTTTCATTCATATTA+TGG | - | chr1_2:30957991-30958010 | Msa0066850:intron | 20.0% |
| !! | AACTTACTATAAGATATAAG+CGG | + | chr1_2:30958306-30958325 | None:intergenic | 20.0% |
| !! | TAGTTTAAATAAGACACTTA+AGG | - | chr1_2:30958600-30958619 | Msa0066850:intron | 20.0% |
| !! | ATATCTGCAATAATTGTATT+TGG | - | chr1_2:30958847-30958866 | Msa0066850:intron | 20.0% |
| !! | TTATTATCTCTATTTGTCAT+AGG | - | chr1_2:30958969-30958988 | Msa0066850:intron | 20.0% |
| !! | AACATAGTGATACTTAATAA+GGG | + | chr1_2:30959014-30959033 | None:intergenic | 20.0% |
| !! | TAACATAGTGATACTTAATA+AGG | + | chr1_2:30959015-30959034 | None:intergenic | 20.0% |
| !!! | TTGTGACAATTTAAATTTTG+GGG | - | chr1_2:30959476-30959495 | Msa0066850:intron | 20.0% |
| !! | ATTAGTAGTACATAAAGTAT+AGG | - | chr1_2:30959622-30959641 | Msa0066850:CDS | 20.0% |
| !! | TCATAAATAGAGAAATCTTA+AGG | - | chr1_2:30959890-30959909 | Msa0066850:intron | 20.0% |
| !! | CATAAATAGAGAAATCTTAA+GGG | - | chr1_2:30959891-30959910 | Msa0066850:intron | 20.0% |
| !! | ATTTCTTTCTTTCTGATAAA+CGG | + | chr1_2:30960208-30960227 | None:intergenic | 20.0% |
| !!! | AAATTTGTAATTTTATGGAC+AGG | - | chr1_2:30960516-30960535 | Msa0066850:CDS | 20.0% |
| !! | AATTAAACAGTTGCATATAT+CGG | + | chr1_2:30960698-30960717 | None:intergenic | 20.0% |
| !!! | ATTAATACTAAATTTTGAGG+TGG | + | chr1_2:30960923-30960942 | None:intergenic | 20.0% |
| !! | AATTATATTCAGTGTCAATA+TGG | + | chr1_2:30961030-30961049 | None:intergenic | 20.0% |
| ! | TAGAATCATTGTATTGTGAA+TGG | + | chr1_2:30957516-30957535 | None:intergenic | 25.0% |
| !!! | TGGTTTTACTACCTTTAAAA+GGG | + | chr1_2:30957637-30957656 | None:intergenic | 25.0% |
| !!! | TTGGTTTTACTACCTTTAAA+AGG | + | chr1_2:30957638-30957657 | None:intergenic | 25.0% |
| ! | CTTAGAAAAAGAAAATTGGT+TGG | + | chr1_2:30957657-30957676 | None:intergenic | 25.0% |
| ! | CAAAATTTAAACTTTGCAAC+TGG | - | chr1_2:30957776-30957795 | Msa0066850:intron | 25.0% |
| ! | CAACAAAATCTTTCTTCTTA+TGG | - | chr1_2:30957922-30957941 | Msa0066850:intron | 25.0% |
| ! | TGACACTATTTAATGAACTA+TGG | + | chr1_2:30957975-30957994 | None:intergenic | 25.0% |
| !! | GTTTTCATGTAACTTATAAG+CGG | - | chr1_2:30958126-30958145 | Msa0066850:CDS | 25.0% |
| !! | TTGTTTGGATTGACTTATTT+CGG | + | chr1_2:30958282-30958301 | None:intergenic | 25.0% |
| ! | AGTACTTAAAGATATTGGTA+TGG | + | chr1_2:30958552-30958571 | None:intergenic | 25.0% |
| ! | TCTTCAGTACTTAAAGATAT+TGG | + | chr1_2:30958557-30958576 | None:intergenic | 25.0% |
| ! | TAAGACAATAAAATTACCGT+CGG | + | chr1_2:30958886-30958905 | None:intergenic | 25.0% |
| ! | ATACTTAATAAGGGTAACAA+AGG | + | chr1_2:30959005-30959024 | None:intergenic | 25.0% |
| ! | CACTATGTTAAGTTTAAATC+TGG | - | chr1_2:30959025-30959044 | Msa0066850:intron | 25.0% |
| !! | GTCTTATCATTTAAGATGAA+AGG | + | chr1_2:30959219-30959238 | None:intergenic | 25.0% |
| !!! | TGATATTTTGACAACCATTT+TGG | - | chr1_2:30959256-30959275 | Msa0066850:intron | 25.0% |
| !! | TTTTCTCTCTCTATTGTTTT+TGG | + | chr1_2:30959324-30959343 | None:intergenic | 25.0% |
| ! | AAAACAATAGAGAGAGAAAA+AGG | - | chr1_2:30959324-30959343 | Msa0066850:intron | 25.0% |
| !! | TGATATTTGTACAACCATTT+TGG | + | chr1_2:30959410-30959429 | None:intergenic | 25.0% |
| !!! | TATCATTTCTCTTTTGAGAA+TGG | - | chr1_2:30959425-30959444 | Msa0066850:intron | 25.0% |
| !! | ATCTTTTAATCATTTGCTCT+TGG | + | chr1_2:30959565-30959584 | None:intergenic | 25.0% |
| ! | GTAAATAAATGTGAGTGAAT+AGG | + | chr1_2:30959943-30959962 | None:intergenic | 25.0% |
| ! | TATGAGACCACTTAAATTAA+AGG | + | chr1_2:30959965-30959984 | None:intergenic | 25.0% |
| !! | TTTGAAATGAATGTAGATCA+TGG | + | chr1_2:30960044-30960063 | None:intergenic | 25.0% |
| !! | CAATTCTAGAAAGAATAGAA+AGG | + | chr1_2:30960485-30960504 | None:intergenic | 25.0% |
| ! | TTTGAACATTAATCCGATTT+CGG | - | chr1_2:30960578-30960597 | Msa0066850:CDS | 25.0% |
| ! | CATGTAAAGAATTAGTCAAA+TGG | + | chr1_2:30960847-30960866 | None:intergenic | 25.0% |
| TGAATGGAATTAGCTATGAA+TGG | + | chr1_2:30957500-30957519 | None:intergenic | 30.0% | |
| !! | AGAGAAAGTATTCATTGGTT+TGG | + | chr1_2:30957558-30957577 | None:intergenic | 30.0% |
| TTTAAAAGGGGCAAAGAAAA+TGG | + | chr1_2:30957624-30957643 | None:intergenic | 30.0% | |
| ! | ATTTTCTTTGCCCCTTTTAA+AGG | - | chr1_2:30957623-30957642 | Msa0066850:CDS | 30.0% |
| !! | GGTTTTACTACCTTTAAAAG+GGG | + | chr1_2:30957636-30957655 | None:intergenic | 30.0% |
| ! | TAACTTTGGTGTGATTTCAT+TGG | + | chr1_2:30957720-30957739 | None:intergenic | 30.0% |
| ! | AGCAACTTTTGCATTATTGA+AGG | - | chr1_2:30957830-30957849 | Msa0066850:CDS | 30.0% |
| ! | GCAACTTTTGCATTATTGAA+GGG | - | chr1_2:30957831-30957850 | Msa0066850:CDS | 30.0% |
| AATCTTTCTTCTTATGGAAG+AGG | - | chr1_2:30957928-30957947 | Msa0066850:intron | 30.0% | |
| !! | CTTATTTTCATAAGTACTCC+AGG | + | chr1_2:30958166-30958185 | None:intergenic | 30.0% |
| TGACTAATGAGAAATGAGTA+TGG | - | chr1_2:30958345-30958364 | Msa0066850:CDS | 30.0% | |
| CCAATAGCTTAATCAAAACA+AGG | + | chr1_2:30958510-30958529 | None:intergenic | 30.0% | |
| !!! | CCTTGTTTTGATTAAGCTAT+TGG | - | chr1_2:30958507-30958526 | Msa0066850:intron | 30.0% |
| TTCGATAGATGAGAAACAAA+AGG | + | chr1_2:30958707-30958726 | None:intergenic | 30.0% | |
| ! | TTAACTAATTCCGTGCTTTT+CGG | - | chr1_2:30958769-30958788 | Msa0066850:intron | 30.0% |
| TCTGCAATAATTGTATTTGG+CGG | - | chr1_2:30958850-30958869 | Msa0066850:intron | 30.0% | |
| AACAGACACTCAAGTAATTT+AGG | + | chr1_2:30958938-30958957 | None:intergenic | 30.0% | |
| TGTTAAGTTTAAATCTGGCT+TGG | - | chr1_2:30959030-30959049 | Msa0066850:intron | 30.0% | |
| !!! | TTTAAATCTGGCTTGGATTT+TGG | - | chr1_2:30959037-30959056 | Msa0066850:intron | 30.0% |
| TAAAGTGAGAATTAAACCCA+AGG | + | chr1_2:30959078-30959097 | None:intergenic | 30.0% | |
| ! | GATAAAAGTATGAGTGAACA+TGG | + | chr1_2:30959101-30959120 | None:intergenic | 30.0% |
| TCTTAAAGGTTGTACCAAAA+TGG | + | chr1_2:30959273-30959292 | None:intergenic | 30.0% | |
| GAACAACAAAGTTGTCTTAA+AGG | + | chr1_2:30959287-30959306 | None:intergenic | 30.0% | |
| GTAGAAAAGTTGTACCAAAA+TGG | - | chr1_2:30959393-30959412 | Msa0066850:intron | 30.0% | |
| !! | TCTCTTTTGAGAATGGATAA+AGG | - | chr1_2:30959432-30959451 | Msa0066850:intron | 30.0% |
| !! | CTCTTTTGAGAATGGATAAA+GGG | - | chr1_2:30959433-30959452 | Msa0066850:intron | 30.0% |
| TTAATCATTTGCTCTTGGAA+AGG | + | chr1_2:30959560-30959579 | None:intergenic | 30.0% | |
| TAGGAACTTTGTAAAATGAG+AGG | - | chr1_2:30959641-30959660 | Msa0066850:intron | 30.0% | |
| AGGAACTTTGTAAAATGAGA+GGG | - | chr1_2:30959642-30959661 | Msa0066850:intron | 30.0% | |
| !! | AAAGAATTTGTTAGCACAGT+AGG | - | chr1_2:30959757-30959776 | Msa0066850:intron | 30.0% |
| !! | AAGAATTTGTTAGCACAGTA+GGG | - | chr1_2:30959758-30959777 | Msa0066850:intron | 30.0% |
| !! | ACTCTAAAGGAGTATTATGA+AGG | + | chr1_2:30959801-30959820 | None:intergenic | 30.0% |
| !! | TTCAGTACTGATGTTAATTG+AGG | - | chr1_2:30960348-30960367 | Msa0066850:intron | 30.0% |
| ! | AATTTTATGGACAGGTTACT+TGG | - | chr1_2:30960524-30960543 | Msa0066850:CDS | 30.0% |
| ! | CTATTGTCTGTTGTGTTGTT+CGG | - | chr1_2:30957454-30957473 | Msa0066850:three_prime_UTR | 35.0% |
| ATGGAATTAGCTATGAATGG+TGG | + | chr1_2:30957497-30957516 | None:intergenic | 35.0% | |
| !! | GAAGGAGAGAAAGTATTCAT+TGG | + | chr1_2:30957563-30957582 | None:intergenic | 35.0% |
| !! | TTTTTGGTATGTGAAGGGAA+AGG | + | chr1_2:30957599-30957618 | None:intergenic | 35.0% |
| !!! | TGGAGTTTTTGGTATGTGAA+GGG | + | chr1_2:30957604-30957623 | None:intergenic | 35.0% |
| !!! | ATGGAGTTTTTGGTATGTGA+AGG | + | chr1_2:30957605-30957624 | None:intergenic | 35.0% |
| ! | GGCAAAGAAAATGGAGTTTT+TGG | + | chr1_2:30957615-30957634 | None:intergenic | 35.0% |
| ! | TAAGATATAAGCGGCTTGTT+TGG | + | chr1_2:30958297-30958316 | None:intergenic | 35.0% |
| TAATGAGAAATGAGTATGGC+AGG | - | chr1_2:30958349-30958368 | Msa0066850:intron | 35.0% | |
| ! | ACAAAGAGCTTTTAGTGAAG+AGG | - | chr1_2:30958409-30958428 | Msa0066850:intron | 35.0% |
| ! | CAAAGAGCTTTTAGTGAAGA+GGG | - | chr1_2:30958410-30958429 | Msa0066850:intron | 35.0% |
| !! | GGAATAGATGATGGAATTTC+CGG | + | chr1_2:30958458-30958477 | None:intergenic | 35.0% |
| GGAAGAAAAGGAATAGATGA+TGG | + | chr1_2:30958467-30958486 | None:intergenic | 35.0% | |
| !! | GTATTCGAAATGAGAGCATT+TGG | - | chr1_2:30958735-30958754 | Msa0066850:intron | 35.0% |
| ! | TAGAGCTTCTTCAAAGTGTT+GGG | + | chr1_2:30958808-30958827 | None:intergenic | 35.0% |
| ATAGAGCTTCTTCAAAGTGT+TGG | + | chr1_2:30958809-30958828 | None:intergenic | 35.0% | |
| TTGAAGAAGCTCTATCTAAC+AGG | - | chr1_2:30958814-30958833 | Msa0066850:intron | 35.0% | |
| CTGCAATAATTGTATTTGGC+GGG | - | chr1_2:30958851-30958870 | Msa0066850:intron | 35.0% | |
| GCATTTCACTATTGATCCTT+GGG | - | chr1_2:30959059-30959078 | Msa0066850:intron | 35.0% | |
| AATCAGCAGCAAACTATAGT+AGG | + | chr1_2:30959134-30959153 | None:intergenic | 35.0% | |
| ! | TTGTTGTTCTCTCTTCTCAT+TGG | - | chr1_2:30959298-30959317 | Msa0066850:intron | 35.0% |
| AACTTTGTAAAATGAGAGGG+TGG | - | chr1_2:30959645-30959664 | Msa0066850:intron | 35.0% | |
| !! | AGAATTTGTTAGCACAGTAG+GGG | - | chr1_2:30959759-30959778 | Msa0066850:intron | 35.0% |
| !! | CTAAAGGAGTATTATGAAGG+AGG | + | chr1_2:30959798-30959817 | None:intergenic | 35.0% |
| !!! | ATCCTTATTTTAATGGCAGC+TGG | - | chr1_2:30960070-30960089 | Msa0066850:intron | 35.0% |
| ATAGCATACCTTAGTTGCAA+AGG | + | chr1_2:30960155-30960174 | None:intergenic | 35.0% | |
| ! | ATGCCTGATCACAATTTGTT+TGG | - | chr1_2:30960261-30960280 | Msa0066850:intron | 35.0% |
| GAACCAAACAAATTGTGATC+AGG | + | chr1_2:30960267-30960286 | None:intergenic | 35.0% | |
| TTGAGCAACAAGAGAAAACA+AGG | - | chr1_2:30960380-30960399 | Msa0066850:intron | 35.0% | |
| TTTCTACACTGAAGTTGAAC+TGG | - | chr1_2:30960430-30960449 | Msa0066850:intron | 35.0% | |
| GCATATATCGGCAACAATTA+GGG | + | chr1_2:30960686-30960705 | None:intergenic | 35.0% | |
| TGCATATATCGGCAACAATT+AGG | + | chr1_2:30960687-30960706 | None:intergenic | 35.0% | |
| AGTCAAATGGATCAATTCTC+AGG | + | chr1_2:30960834-30960853 | None:intergenic | 35.0% | |
| TTCAGTGTCAATATGGAACT+AGG | + | chr1_2:30961023-30961042 | None:intergenic | 35.0% | |
| ACAACAGACAATAGCAGCTA+AGG | + | chr1_2:30957448-30957467 | None:intergenic | 40.0% | |
| ! | AGCTATGAATGGTGGAAAGT+GGG | + | chr1_2:30957489-30957508 | None:intergenic | 40.0% |
| ! | TAGCTATGAATGGTGGAAAG+TGG | + | chr1_2:30957490-30957509 | None:intergenic | 40.0% |
| AAAGGTAGAATTGTGGAGGA+AGG | + | chr1_2:30957581-30957600 | None:intergenic | 40.0% | |
| TGAAGGGAAAGGTAGAATTG+TGG | + | chr1_2:30957588-30957607 | None:intergenic | 40.0% | |
| ! | TCAGGATTTTGTTCAGATGC+AGG | - | chr1_2:30957865-30957884 | Msa0066850:CDS | 40.0% |
| AGAAATGAGTATGGCAGGTT+AGG | - | chr1_2:30958354-30958373 | Msa0066850:intron | 40.0% | |
| ! | TATTCCTTTTCTTCCTCACG+TGG | - | chr1_2:30958472-30958491 | Msa0066850:intron | 40.0% |
| !!! | GTTTTAAAACTCACCACGTG+AGG | + | chr1_2:30958488-30958507 | None:intergenic | 40.0% |
| CTACTTCAATCCGAAAAGCA+CGG | + | chr1_2:30958782-30958801 | None:intergenic | 40.0% | |
| GGCATTTCACTATTGATCCT+TGG | - | chr1_2:30959058-30959077 | Msa0066850:intron | 40.0% | |
| ! | TGGGGTGCAAGTTTAGTTTA+AGG | - | chr1_2:30959494-30959513 | Msa0066850:intron | 40.0% |
| ATCATTTGCTCTTGGAAAGG+AGG | + | chr1_2:30959557-30959576 | None:intergenic | 40.0% | |
| TTTCATAAATCAGACCCCGA+AGG | + | chr1_2:30959848-30959867 | None:intergenic | 40.0% | |
| CTCCAGCTGCCATTAAAATA+AGG | + | chr1_2:30960075-30960094 | None:intergenic | 40.0% | |
| TGCATTTGCCTTTGCAACTA+AGG | - | chr1_2:30960144-30960163 | Msa0066850:intron | 40.0% | |
| GTAGAAACATACCAGTTCCA+AGG | + | chr1_2:30960417-30960436 | None:intergenic | 40.0% | |
| GTTCAAACATACACCACTTG+TGG | + | chr1_2:30960565-30960584 | None:intergenic | 40.0% | |
| ATTAATCCGATTTCGGCATC+TGG | - | chr1_2:30960585-30960604 | Msa0066850:CDS | 40.0% | |
| ! | AGACTTGCATTTTGTTGCTC+TGG | - | chr1_2:30960880-30960899 | Msa0066850:exon | 40.0% |
| ATGGAACTAGGACAGAATTC+TGG | + | chr1_2:30961011-30961030 | None:intergenic | 40.0% | |
| AGGGAAAGGTAGAATTGTGG+AGG | + | chr1_2:30957585-30957604 | None:intergenic | 45.0% | |
| CATTATTGAAGGGCCAGAGA+CGG | - | chr1_2:30957841-30957860 | Msa0066850:CDS | 45.0% | |
| ACAAAATCCTGAACCGTCTC+TGG | + | chr1_2:30957857-30957876 | None:intergenic | 45.0% | |
| ! | TTTTGTTCAGATGCAGGTGC+AGG | - | chr1_2:30957871-30957890 | Msa0066850:CDS | 45.0% |
| ! | AGCTTTTAGTGAAGAGGGAG+AGG | - | chr1_2:30958415-30958434 | Msa0066850:intron | 45.0% |
| GGAAGATGCAAATGAGATGC+CGG | - | chr1_2:30958436-30958455 | Msa0066850:intron | 45.0% | |
| AGTATTATGAAGGAGGACCC+AGG | + | chr1_2:30959791-30959810 | None:intergenic | 45.0% | |
| CTGGAGCTGAAATTGGGTAT+AGG | - | chr1_2:30960089-30960108 | Msa0066850:intron | 45.0% | |
| GAGCTGAAATTGGGTATAGG+TGG | - | chr1_2:30960092-30960111 | Msa0066850:intron | 45.0% | |
| TATAGGTGGCACGTCATATG+AGG | - | chr1_2:30960106-30960125 | Msa0066850:intron | 45.0% | |
| CACAATTGGGTCAACTTGAC+TGG | + | chr1_2:30960296-30960315 | None:intergenic | 45.0% | |
| !! | CAGTCAAGTTGACCCAATTG+TGG | - | chr1_2:30960294-30960313 | Msa0066850:intron | 45.0% |
| CCGAAAAGGATGCCACAATT+GGG | + | chr1_2:30960309-30960328 | None:intergenic | 45.0% | |
| ! | CCCAATTGTGGCATCCTTTT+CGG | - | chr1_2:30960306-30960325 | Msa0066850:intron | 45.0% |
| ! | CCAATTGTGGCATCCTTTTC+GGG | - | chr1_2:30960307-30960326 | Msa0066850:intron | 45.0% |
| ! | ACAAGGTGCAAGTATTGCCT+TGG | - | chr1_2:30960397-30960416 | Msa0066850:intron | 45.0% |
| ! | TGCAAGTATTGCCTTGGAAC+TGG | - | chr1_2:30960403-30960422 | Msa0066850:intron | 45.0% |
| ! | GAAGTACCAGATGCCGAAAT+CGG | + | chr1_2:30960594-30960613 | None:intergenic | 45.0% |
| TTTGGACACCTTGTCGTTGT+AGG | + | chr1_2:30960636-30960655 | None:intergenic | 45.0% | |
| ! | ACAAGGTGTCCAAATTGCTC+TGG | - | chr1_2:30960642-30960661 | Msa0066850:intron | 45.0% |
| TTTCCAGCACCAGAGCAATT+TGG | + | chr1_2:30960654-30960673 | None:intergenic | 45.0% | |
| ! | AAATTGCTCTGGTGCTGGAA+AGG | - | chr1_2:30960653-30960672 | Msa0066850:intron | 45.0% |
| AACTAGGACAGAATTCTGGC+AGG | + | chr1_2:30961007-30961026 | None:intergenic | 45.0% | |
| !!! | AAAACTTTTTATTTTTTTAT+AGG | - | chr1_2:30959703-30959722 | Msa0066850:intron | 5.0% |
| !!! | TTATAAAATTTGTAATTTTA+TGG | - | chr1_2:30960511-30960530 | Msa0066850:CDS | 5.0% |
| AATTGCGTGCTCTTCTCCAC+AGG | - | chr1_2:30957685-30957704 | Msa0066850:intron | 50.0% | |
| ! | GCGGTTTTCGTAAGCTATCC+TGG | - | chr1_2:30958145-30958164 | Msa0066850:intron | 50.0% |
| CTCACCACGTGAGGAAGAAA+AGG | + | chr1_2:30958479-30958498 | None:intergenic | 50.0% | |
| CACAGTAGGGGTCAAAACCT+GGG | - | chr1_2:30959771-30959790 | Msa0066850:intron | 50.0% | |
| !! | GGTATCGGTTGGGACTCTAA+AGG | + | chr1_2:30959814-30959833 | None:intergenic | 50.0% |
| ATGGCAGCTGGAGCTGAAAT+TGG | - | chr1_2:30960082-30960101 | Msa0066850:intron | 50.0% | |
| TGGCAGCTGGAGCTGAAATT+GGG | - | chr1_2:30960083-30960102 | Msa0066850:intron | 50.0% | |
| CCCGAAAAGGATGCCACAAT+TGG | + | chr1_2:30960310-30960329 | None:intergenic | 50.0% | |
| !! | ATTGTGGCATCCTTTTCGGG+TGG | - | chr1_2:30960310-30960329 | Msa0066850:intron | 50.0% |
| TACTTCTGTTAGACCCCTGC+AGG | - | chr1_2:30960608-30960627 | Msa0066850:intron | 50.0% | |
| TGTCGTTGTAGGAACCTGCA+GGG | + | chr1_2:30960625-30960644 | None:intergenic | 50.0% | |
| TTGTCGTTGTAGGAACCTGC+AGG | + | chr1_2:30960626-30960645 | None:intergenic | 50.0% | |
| TGCAGGTTCCTACAACGACA+AGG | - | chr1_2:30960625-30960644 | Msa0066850:intron | 50.0% | |
| TGTCCAAATTGCTCTGGTGC+TGG | - | chr1_2:30960648-30960667 | Msa0066850:intron | 50.0% | |
| CCATCTTCATCCCAGTGCAA+AGG | + | chr1_2:30960798-30960817 | None:intergenic | 50.0% | |
| CCTTTGCACTGGGATGAAGA+TGG | - | chr1_2:30960795-30960814 | Msa0066850:CDS | 50.0% | |
| TGCTCTTCTCCACAGGATGC+AGG | - | chr1_2:30957692-30957711 | Msa0066850:intron | 55.0% | |
| TCATTGGAGCCTGCATCCTG+TGG | + | chr1_2:30957704-30957723 | None:intergenic | 55.0% | |
| GCACAGTAGGGGTCAAAACC+TGG | - | chr1_2:30959770-30959789 | Msa0066850:intron | 55.0% | |
| AAGGTGTACCCCAGCGGTAT+CGG | + | chr1_2:30959829-30959848 | None:intergenic | 55.0% | |
| ATACCGCTGGGGTACACCTT+CGG | - | chr1_2:30959829-30959848 | Msa0066850:intron | 55.0% | |
| !!! | TCCTTTTCGGGTGGAGCAGT+TGG | - | chr1_2:30960319-30960338 | Msa0066850:intron | 55.0% |
| !! | CAGGTTACTTGGCTTGCGCT+CGG | - | chr1_2:30960535-30960554 | Msa0066850:CDS | 55.0% |
| GTCGTTGTAGGAACCTGCAG+GGG | + | chr1_2:30960624-30960643 | None:intergenic | 55.0% | |
| TGTCCAACCTGCCTTTGCAC+TGG | - | chr1_2:30960784-30960803 | Msa0066850:CDS | 55.0% | |
| GTCCAACCTGCCTTTGCACT+GGG | - | chr1_2:30960785-30960804 | Msa0066850:CDS | 55.0% | |
| ATCCCAGTGCAAAGGCAGGT+TGG | + | chr1_2:30960790-30960809 | None:intergenic | 55.0% | |
| CTTCATCCCAGTGCAAAGGC+AGG | + | chr1_2:30960794-30960813 | None:intergenic | 55.0% | |
| TGAAGGGCCAGAGACGGTTC+AGG | - | chr1_2:30957847-30957866 | Msa0066850:CDS | 60.0% | |
| GGAGATTGCGTGTGCAGCAG+CGG | - | chr1_2:30958375-30958394 | Msa0066850:intron | 60.0% | |
| !! | TGGCGGGCTTATTGCACCGA+CGG | - | chr1_2:30958867-30958886 | Msa0066850:intron | 60.0% |
| AGAGTCCCAACCGATACCGC+TGG | - | chr1_2:30959816-30959835 | Msa0066850:intron | 60.0% | |
| GAGTCCCAACCGATACCGCT+GGG | - | chr1_2:30959817-30959836 | Msa0066850:intron | 60.0% | |
| AGTCCCAACCGATACCGCTG+GGG | - | chr1_2:30959818-30959837 | Msa0066850:intron | 60.0% | |
| !! | GTACCCCAGCGGTATCGGTT+GGG | + | chr1_2:30959824-30959843 | None:intergenic | 60.0% |
| !! | TGTACCCCAGCGGTATCGGT+TGG | + | chr1_2:30959825-30959844 | None:intergenic | 60.0% |
| TACCGCTGGGGTACACCTTC+GGG | - | chr1_2:30959830-30959849 | Msa0066850:intron | 60.0% | |
| GCCAACTGCTCCACCCGAAA+AGG | + | chr1_2:30960323-30960342 | None:intergenic | 60.0% | |
| !! | TGCGCTCGGTGTTCCACAAG+TGG | - | chr1_2:30960549-30960568 | Msa0066850:CDS | 60.0% |
| ACCGCTGGGGTACACCTTCG+GGG | - | chr1_2:30959831-30959850 | Msa0066850:intron | 65.0% | |
| ! | ACCCCGAAGGTGTACCCCAG+CGG | + | chr1_2:30959835-30959854 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 30957376 | 30961079 | 30957376 | ID=Msa0066850;Name=Msa0066850 |
| chr1_2 | mRNA | 30957376 | 30961079 | 30957376 | ID=Msa0066850-mRNA-1;Parent=Msa0066850;Name=Msa0066850-mRNA-1;_AED=0.10;_eAED=0.10;_QI=187|1|1|1|1|1|8|224|306 |
| chr1_2 | exon | 30957376 | 30957677 | 30957376 | ID=Msa0066850-mRNA-1:exon:10316;Parent=Msa0066850-mRNA-1 |
| chr1_2 | exon | 30957781 | 30957917 | 30957781 | ID=Msa0066850-mRNA-1:exon:10315;Parent=Msa0066850-mRNA-1 |
| chr1_2 | exon | 30958031 | 30958158 | 30958031 | ID=Msa0066850-mRNA-1:exon:10314;Parent=Msa0066850-mRNA-1 |
| chr1_2 | exon | 30958290 | 30958366 | 30958290 | ID=Msa0066850-mRNA-1:exon:10313;Parent=Msa0066850-mRNA-1 |
| chr1_2 | exon | 30959567 | 30959653 | 30959567 | ID=Msa0066850-mRNA-1:exon:10312;Parent=Msa0066850-mRNA-1 |
| chr1_2 | exon | 30959962 | 30960084 | 30959962 | ID=Msa0066850-mRNA-1:exon:10311;Parent=Msa0066850-mRNA-1 |
| chr1_2 | exon | 30960506 | 30960623 | 30960506 | ID=Msa0066850-mRNA-1:exon:10310;Parent=Msa0066850-mRNA-1 |
| chr1_2 | exon | 30960720 | 30961079 | 30960720 | ID=Msa0066850-mRNA-1:exon:10309;Parent=Msa0066850-mRNA-1 |
| chr1_2 | five_prime_UTR | 30960893 | 30961079 | 30960893 | ID=Msa0066850-mRNA-1:five_prime_utr;Parent=Msa0066850-mRNA-1 |
| chr1_2 | CDS | 30960720 | 30960892 | 30960720 | ID=Msa0066850-mRNA-1:cds;Parent=Msa0066850-mRNA-1 |
| chr1_2 | CDS | 30960506 | 30960623 | 30960506 | ID=Msa0066850-mRNA-1:cds;Parent=Msa0066850-mRNA-1 |
| chr1_2 | CDS | 30959962 | 30960084 | 30959962 | ID=Msa0066850-mRNA-1:cds;Parent=Msa0066850-mRNA-1 |
| chr1_2 | CDS | 30959567 | 30959653 | 30959567 | ID=Msa0066850-mRNA-1:cds;Parent=Msa0066850-mRNA-1 |
| chr1_2 | CDS | 30958290 | 30958366 | 30958290 | ID=Msa0066850-mRNA-1:cds;Parent=Msa0066850-mRNA-1 |
| chr1_2 | CDS | 30958031 | 30958158 | 30958031 | ID=Msa0066850-mRNA-1:cds;Parent=Msa0066850-mRNA-1 |
| chr1_2 | CDS | 30957781 | 30957917 | 30957781 | ID=Msa0066850-mRNA-1:cds;Parent=Msa0066850-mRNA-1 |
| chr1_2 | CDS | 30957600 | 30957677 | 30957600 | ID=Msa0066850-mRNA-1:cds;Parent=Msa0066850-mRNA-1 |
| chr1_2 | three_prime_UTR | 30957376 | 30957599 | 30957376 | ID=Msa0066850-mRNA-1:three_prime_utr;Parent=Msa0066850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
