Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159310 | XP_003624751.1 | 94.495 | 436 | 24 | 0 | 1 | 436 | 1 | 436 | 0.0 | 853 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159310 | sp|Q9FN79|BDG5_ARATH | 47.991 | 448 | 203 | 7 | 5 | 435 | 2 | 436 | 1.19e-143 | 420 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159310 | G7L2L1 | 94.495 | 436 | 24 | 0 | 1 | 436 | 1 | 436 | 0.0 | 853 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0619480 | Msa1159310 | 0.813488 | 2.495748e-51 | -8.615850e-47 |
| Msa0659640 | Msa1159310 | 0.811091 | 8.327082e-51 | -8.615850e-47 |
| Msa1118180 | Msa1159310 | 0.903046 | 5.194481e-79 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159310 | MtrunA17_Chr7g0254351 | 94.495 | 436 | 24 | 0 | 1 | 436 | 1 | 436 | 0.0 | 853 |
| Msa1159310 | MtrunA17_Chr1g0189081 | 37.687 | 467 | 232 | 9 | 20 | 435 | 32 | 490 | 5.65e-111 | 335 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159310 | AT5G17720.1 | 47.991 | 448 | 203 | 7 | 5 | 435 | 2 | 436 | 1.21e-144 | 420 |
| Msa1159310 | AT5G17780.2 | 49.762 | 420 | 193 | 6 | 23 | 436 | 12 | 419 | 1.09e-143 | 417 |
| Msa1159310 | AT5G17780.1 | 49.762 | 420 | 191 | 7 | 23 | 436 | 12 | 417 | 9.62e-143 | 414 |
| Msa1159310 | AT1G64670.1 | 36.797 | 462 | 235 | 10 | 20 | 433 | 5 | 457 | 7.24e-108 | 327 |
| Msa1159310 | AT1G64670.3 | 36.797 | 462 | 235 | 10 | 20 | 433 | 52 | 504 | 1.60e-107 | 328 |
| Msa1159310 | AT1G64670.2 | 36.797 | 462 | 235 | 10 | 20 | 433 | 60 | 512 | 2.25e-107 | 327 |
| Msa1159310 | AT5G41900.1 | 35.684 | 468 | 240 | 10 | 20 | 433 | 5 | 465 | 3.48e-102 | 312 |
| Msa1159310 | AT4G24140.1 | 33.811 | 488 | 240 | 11 | 22 | 435 | 17 | 495 | 8.41e-97 | 299 |
Find 101 sgRNAs with CRISPR-Local
Find 326 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCTTGTTGTTGCTCTAAA+TGG | 0.105119 | 7_4:+48923684 | Msa1159310:CDS |
| TTATGTGTTCTTCCTCATTT+TGG | 0.121606 | 7_4:+48924662 | Msa1159310:CDS |
| CAAGGATATATAAGTGTTTA+AGG | 0.166368 | 7_4:-48923293 | None:intergenic |
| TGCTTCAATTTGGTAGAAAA+AGG | 0.210140 | 7_4:+48923798 | Msa1159310:CDS |
| TACAGCTACCATACCTATTA+AGG | 0.218823 | 7_4:-48923954 | None:intergenic |
| CATCATTAAGTTGAAGTTAA+AGG | 0.220250 | 7_4:+48925934 | Msa1159310:CDS |
| AAGAACATGTTTAGAGGAAT+AGG | 0.269297 | 7_4:+48923773 | Msa1159310:CDS |
| TCATCTGGTTGCACACTCTA+TGG | 0.276171 | 7_4:+48924861 | Msa1159310:CDS |
| GCTATAGACCTGTTGGGATT+TGG | 0.300946 | 7_4:+48924742 | Msa1159310:CDS |
| GGAATAGGTTTGCTTCAATT+TGG | 0.301537 | 7_4:+48923788 | Msa1159310:CDS |
| ATTATGTTAATTTCAGCATT+TGG | 0.316822 | 7_4:-48925959 | None:intergenic |
| GATGTGAGTCTTGTCTTTCA+TGG | 0.339240 | 7_4:+48923882 | Msa1159310:CDS |
| TATGTCATGGTACGAGCATT+TGG | 0.343618 | 7_4:+48925460 | Msa1159310:CDS |
| AAAGCACTTGAAAAGTTTGC+TGG | 0.352230 | 7_4:+48925398 | Msa1159310:CDS |
| GTTGTTAAGGAACCCTTAAT+AGG | 0.359077 | 7_4:+48923941 | Msa1159310:CDS |
| ACTTAATGATGCACTCCTTT+GGG | 0.362108 | 7_4:-48925922 | None:intergenic |
| AACTTAATGATGCACTCCTT+TGG | 0.368252 | 7_4:-48925923 | None:intergenic |
| GAGCAAGTGGAAATGCGTTT+AGG | 0.380714 | 7_4:-48923242 | None:intergenic |
| TCCTTGTTGTTGCTCTAAAT+GGG | 0.383538 | 7_4:+48923685 | Msa1159310:CDS |
| GATCACAGCACTGTGCTATT+AGG | 0.387386 | 7_4:+48925992 | Msa1159310:CDS |
| CAGTGTAATTGCATTGGCTT+TGG | 0.392465 | 7_4:+48924885 | Msa1159310:CDS |
| GGAATTGAATGAAATGAAAT+TGG | 0.392886 | 7_4:+48926242 | Msa1159310:three_prime_UTR |
| GACTCTTTCCAAATCCCAAC+AGG | 0.393861 | 7_4:-48924750 | None:intergenic |
| TACAAACAATCTCTTGGCTT+TGG | 0.394547 | 7_4:-48924772 | None:intergenic |
| GAAGCAATTTGCACAAAGTC+TGG | 0.397626 | 7_4:+48926021 | Msa1159310:CDS |
| CACAAAGTCTGGAGCATACA+TGG | 0.399799 | 7_4:+48926032 | Msa1159310:CDS |
| TGTGATTTCTGCAATAGATT+AGG | 0.408283 | 7_4:-48925496 | None:intergenic |
| ATGTCATGGTACGAGCATTT+GGG | 0.409196 | 7_4:+48925461 | Msa1159310:CDS |
| AAATTCTCATATTTAATCAA+TGG | 0.421450 | 7_4:-48926070 | None:intergenic |
| AGATTGTTTGTACACTTTGA+AGG | 0.424010 | 7_4:+48924783 | Msa1159310:CDS |
| CTGGTTCTTCATTTATGTCA+TGG | 0.433000 | 7_4:+48925447 | Msa1159310:CDS |
| AGGGAGGAAGAAAATTCTAA+TGG | 0.442240 | 7_4:+48923818 | Msa1159310:CDS |
| TACCTTGATGAACGCATTGA+TGG | 0.450597 | 7_4:+48923653 | Msa1159310:CDS |
| GTGGTTCAACCATTGCAGTT+AGG | 0.451583 | 7_4:+48924832 | Msa1159310:CDS |
| TCTTGTCTTTCATGGGTGAA+TGG | 0.458063 | 7_4:+48923890 | Msa1159310:CDS |
| ACAGCTACCATACCTATTAA+GGG | 0.460389 | 7_4:-48923953 | None:intergenic |
| GAGAGGAAGAACATGTTTAG+AGG | 0.465924 | 7_4:+48923767 | Msa1159310:CDS |
| CATCTGGTTGCACACTCTAT+GGG | 0.468936 | 7_4:+48924862 | Msa1159310:CDS |
| AAAGTGTACAAACAATCTCT+TGG | 0.469127 | 7_4:-48924778 | None:intergenic |
| TTGATTGCTATAGACCTGTT+GGG | 0.476348 | 7_4:+48924736 | Msa1159310:CDS |
| TCCATGCATAATGTGATATG+TGG | 0.487596 | 7_4:+48925809 | Msa1159310:CDS |
| TGAATGAAATGAAATTGGTC+AGG | 0.492997 | 7_4:+48926247 | Msa1159310:three_prime_UTR |
| ATTGCAGAAATCACAGGATG+TGG | 0.498456 | 7_4:+48925504 | Msa1159310:CDS |
| CTAGAGACATTGAGTGGTAT+TGG | 0.499170 | 7_4:-48923502 | None:intergenic |
| ACTGGACATACTCATCAATC+AGG | 0.499834 | 7_4:+48925779 | Msa1159310:CDS |
| TTTCAGATAGTTTGTATGAG+AGG | 0.502992 | 7_4:+48923750 | Msa1159310:CDS |
| ATGTGAGTCTTGTCTTTCAT+GGG | 0.513620 | 7_4:+48923883 | Msa1159310:CDS |
| ATTGATTGCTATAGACCTGT+TGG | 0.519702 | 7_4:+48924735 | Msa1159310:CDS |
| GAAAATTCTAATGGAAAATG+TGG | 0.521958 | 7_4:+48923827 | Msa1159310:CDS |
| GACATACTCATCAATCAGGT+TGG | 0.522121 | 7_4:+48925783 | Msa1159310:CDS |
| TTGTGGCCAATGTTATCAGC+TGG | 0.524346 | 7_4:+48925428 | Msa1159310:CDS |
| ACAGTGCTGTGATCTGCATT+TGG | 0.538453 | 7_4:-48925983 | None:intergenic |
| TATGGGCAGTGTAATTGCAT+TGG | 0.539095 | 7_4:+48924879 | Msa1159310:CDS |
| GTGGAAGGATAGTGAAAAGT+TGG | 0.541215 | 7_4:+48923849 | Msa1159310:CDS |
| GTGAAAAGTTGGTCTGATTG+TGG | 0.541770 | 7_4:+48923860 | Msa1159310:CDS |
| GAAATCACAGGATGTGGGAG+AGG | 0.545446 | 7_4:+48925510 | Msa1159310:CDS |
| CCCCATCAATGCGTTCATCA+AGG | 0.550900 | 7_4:-48923655 | None:intergenic |
| TGAACAAGCATCATTGCCCT+CGG | 0.553528 | 7_4:-48925375 | None:intergenic |
| TAAAGTTCATTACTCGCAAG+AGG | 0.555328 | 7_4:+48925537 | Msa1159310:CDS |
| TGGAATGGAGAGGGAGCAAG+TGG | 0.556037 | 7_4:-48923255 | None:intergenic |
| ACCTTGATGAACGCATTGAT+GGG | 0.567521 | 7_4:+48923654 | Msa1159310:CDS |
| GAGAATGTTATATTCTTGCA+TGG | 0.571660 | 7_4:+48924637 | Msa1159310:CDS |
| GCAGCCGTACTCTTCTTCCG+AGG | 0.574494 | 7_4:+48925358 | Msa1159310:intron |
| TAATCTATTGCAGAAATCAC+AGG | 0.576577 | 7_4:+48925498 | Msa1159310:CDS |
| CCCACATATCACATTATGCA+TGG | 0.577899 | 7_4:-48925810 | None:intergenic |
| ATGGGAGAGACAGAAGAAGA+TGG | 0.581802 | 7_4:+48923703 | Msa1159310:CDS |
| CTAATGGAAAATGTGGTGGA+AGG | 0.582282 | 7_4:+48923834 | Msa1159310:CDS |
| CACTGTTTGAGTCCAAAATG+AGG | 0.584177 | 7_4:-48924674 | None:intergenic |
| AGTTTGCTGGAAAGAAATTG+TGG | 0.585913 | 7_4:+48925411 | Msa1159310:CDS |
| TTCTTGATAACAGACATGAC+TGG | 0.588836 | 7_4:+48925761 | Msa1159310:CDS |
| GTTAAAATAAATGTTATACA+AGG | 0.593759 | 7_4:+48925881 | Msa1159310:CDS |
| AATTCTAATGGAAAATGTGG+TGG | 0.594988 | 7_4:+48923830 | Msa1159310:CDS |
| TTGCCCTCGGAAGAAGAGTA+CGG | 0.598092 | 7_4:-48925362 | None:intergenic |
| AAGTGATAATGGAATGGAGA+GGG | 0.599161 | 7_4:-48923264 | None:intergenic |
| TGTCTTTCATGGGTGAATGG+TGG | 0.601295 | 7_4:+48923893 | Msa1159310:CDS |
| CAGCCGTACTCTTCTTCCGA+GGG | 0.605517 | 7_4:+48925359 | Msa1159310:intron |
| GTACACTTTGAAGGATCATG+TGG | 0.607082 | 7_4:+48924792 | Msa1159310:CDS |
| CATCAAGAAGATCAAAGATG+AGG | 0.610753 | 7_4:-48923607 | None:intergenic |
| GAAGAACCAGCTGATAACAT+TGG | 0.613682 | 7_4:-48925434 | None:intergenic |
| GTGATGAATGATGAAGATGA+TGG | 0.620573 | 7_4:+48923725 | Msa1159310:CDS |
| TGAAAACTACCTAACTGCAA+TGG | 0.630112 | 7_4:-48924841 | None:intergenic |
| TTGCAGAAATCACAGGATGT+GGG | 0.630242 | 7_4:+48925505 | Msa1159310:CDS |
| AGCCACCGGTGAAAACTGCA+AGG | 0.634654 | 7_4:+48924603 | Msa1159310:intron |
| TAGAGATCAAGTTGTCCCAA+AGG | 0.636770 | 7_4:+48925907 | Msa1159310:CDS |
| CCATGCATAATGTGATATGT+GGG | 0.638365 | 7_4:+48925810 | Msa1159310:CDS |
| TGATGAACGCATTGATGGGG+TGG | 0.639506 | 7_4:+48923658 | Msa1159310:CDS |
| AGGTACTTACAGGAGCAACA+AGG | 0.643454 | 7_4:-48924942 | None:intergenic |
| TTGAATATATAATTTCTGAG+TGG | 0.651587 | 7_4:+48926221 | Msa1159310:three_prime_UTR |
| TTTAGAGCAACAACAAGGAG+AGG | 0.653335 | 7_4:-48923681 | None:intergenic |
| GGTACTTACAGGAGCAACAA+GGG | 0.656634 | 7_4:-48924941 | None:intergenic |
| AAAGTGATAATGGAATGGAG+AGG | 0.659573 | 7_4:-48923265 | None:intergenic |
| ACAAAGTCTGGAGCATACAT+GGG | 0.661023 | 7_4:+48926033 | Msa1159310:CDS |
| TCCCATTTAGAGCAACAACA+AGG | 0.665324 | 7_4:-48923686 | None:intergenic |
| AGTACTACATCAAAGAGACA+AGG | 0.697104 | 7_4:-48923311 | None:intergenic |
| CCTTGATGAACGCATTGATG+GGG | 0.701791 | 7_4:+48923655 | Msa1159310:CDS |
| GCCACCGGTGAAAACTGCAA+GGG | 0.704203 | 7_4:+48924604 | Msa1159310:intron |
| AAGAATATAACATTCTCACA+AGG | 0.713736 | 7_4:-48924631 | None:intergenic |
| CATGCATAATGTGATATGTG+GGG | 0.714654 | 7_4:+48925811 | Msa1159310:CDS |
| AAACTGCTAGAGACATTGAG+TGG | 0.716848 | 7_4:-48923508 | None:intergenic |
| GGAAATGATTGAGAAATCTG+TGG | 0.717663 | 7_4:+48924813 | Msa1159310:CDS |
| ATGCATAATGTGATATGTGG+GGG | 0.727700 | 7_4:+48925812 | Msa1159310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAATAAAAAAGAAAATT+AGG | - | chr7_4:48925323-48925342 | None:intergenic | 10.0% |
| !! | ACAAAAAGAAATAAATAAAA+AGG | - | chr7_4:48925722-48925741 | None:intergenic | 10.0% |
| !! | AAGAAATAAAAAAGAAAATT+AGG | - | chr7_4:48925323-48925342 | None:intergenic | 10.0% |
| !! | ACAAAAAGAAATAAATAAAA+AGG | - | chr7_4:48925722-48925741 | None:intergenic | 10.0% |
| !!! | AAATAGTTTGACTTTATTAT+TGG | + | chr7_4:48924115-48924134 | Msa1159310:intron | 15.0% |
| !! | ATTTATATAACAAAAGACAT+AGG | - | chr7_4:48924424-48924443 | None:intergenic | 15.0% |
| !!! | TTCTTTTTTATTTCTTCTTA+TGG | + | chr7_4:48925327-48925346 | Msa1159310:intron | 15.0% |
| !!! | TTGAAAATTTTGACAAAAAA+TGG | + | chr7_4:48925857-48925876 | Msa1159310:CDS | 15.0% |
| !! | GTTAAAATAAATGTTATACA+AGG | + | chr7_4:48925881-48925900 | Msa1159310:CDS | 15.0% |
| !! | AAATTCTCATATTTAATCAA+TGG | - | chr7_4:48926073-48926092 | None:intergenic | 15.0% |
| !!! | TAAATATGAGAATTTCTTTT+TGG | + | chr7_4:48926078-48926097 | Msa1159310:three_prime_UTR | 15.0% |
| !!! | AAATAGTTTGACTTTATTAT+TGG | + | chr7_4:48924115-48924134 | Msa1159310:intron | 15.0% |
| !! | ATTTATATAACAAAAGACAT+AGG | - | chr7_4:48924424-48924443 | None:intergenic | 15.0% |
| !!! | TTCTTTTTTATTTCTTCTTA+TGG | + | chr7_4:48925327-48925346 | Msa1159310:intron | 15.0% |
| !!! | TTGAAAATTTTGACAAAAAA+TGG | + | chr7_4:48925857-48925876 | Msa1159310:CDS | 15.0% |
| !! | GTTAAAATAAATGTTATACA+AGG | + | chr7_4:48925881-48925900 | Msa1159310:CDS | 15.0% |
| !! | AAATTCTCATATTTAATCAA+TGG | - | chr7_4:48926073-48926092 | None:intergenic | 15.0% |
| !!! | TAAATATGAGAATTTCTTTT+TGG | + | chr7_4:48926078-48926097 | Msa1159310:three_prime_UTR | 15.0% |
| !! | CATTAATAAAAACTAGAATC+TGG | + | chr7_4:48923466-48923485 | Msa1159310:five_prime_UTR | 20.0% |
| !!! | TAAACTTCATTTTGTTGTTA+AGG | + | chr7_4:48923928-48923947 | Msa1159310:CDS | 20.0% |
| !!! | TTTTGTGCTACATATTTTTT+TGG | + | chr7_4:48925030-48925049 | Msa1159310:intron | 20.0% |
| !!! | TATGTTTTGATGTTTTTACT+CGG | + | chr7_4:48925113-48925132 | Msa1159310:intron | 20.0% |
| !!! | TTTAATTTGCATCAAACTTA+TGG | + | chr7_4:48925188-48925207 | Msa1159310:intron | 20.0% |
| !!! | TTTATTTCTTCTTATGGTTT+TGG | + | chr7_4:48925333-48925352 | Msa1159310:intron | 20.0% |
| !!! | GTAATAACCATTTTATTGAA+AGG | + | chr7_4:48925559-48925578 | Msa1159310:intron | 20.0% |
| !!! | AAATAAATAAAAAGGTGTGT+CGG | - | chr7_4:48925714-48925733 | None:intergenic | 20.0% |
| !!! | TATTTCTTTTTGTCTTTTTC+AGG | + | chr7_4:48925729-48925748 | Msa1159310:intron | 20.0% |
| !!! | ATTTCTTTTTGTCTTTTTCA+GGG | + | chr7_4:48925730-48925749 | Msa1159310:intron | 20.0% |
| !! | ATTATGTTAATTTCAGCATT+TGG | - | chr7_4:48925962-48925981 | None:intergenic | 20.0% |
| !!! | AGAATTTCTTTTTGGTAATT+TGG | + | chr7_4:48926086-48926105 | Msa1159310:three_prime_UTR | 20.0% |
| !! | TTGAATATATAATTTCTGAG+TGG | + | chr7_4:48926221-48926240 | Msa1159310:three_prime_UTR | 20.0% |
| !! | CATTAATAAAAACTAGAATC+TGG | + | chr7_4:48923466-48923485 | Msa1159310:five_prime_UTR | 20.0% |
| !!! | TAAACTTCATTTTGTTGTTA+AGG | + | chr7_4:48923928-48923947 | Msa1159310:CDS | 20.0% |
| !!! | TTTTGTGCTACATATTTTTT+TGG | + | chr7_4:48925030-48925049 | Msa1159310:intron | 20.0% |
| !!! | TATGTTTTGATGTTTTTACT+CGG | + | chr7_4:48925113-48925132 | Msa1159310:intron | 20.0% |
| !!! | TTTAATTTGCATCAAACTTA+TGG | + | chr7_4:48925188-48925207 | Msa1159310:intron | 20.0% |
| !!! | TTTATTTCTTCTTATGGTTT+TGG | + | chr7_4:48925333-48925352 | Msa1159310:intron | 20.0% |
| !!! | GTAATAACCATTTTATTGAA+AGG | + | chr7_4:48925559-48925578 | Msa1159310:intron | 20.0% |
| !!! | AAATAAATAAAAAGGTGTGT+CGG | - | chr7_4:48925714-48925733 | None:intergenic | 20.0% |
| !!! | TATTTCTTTTTGTCTTTTTC+AGG | + | chr7_4:48925729-48925748 | Msa1159310:intron | 20.0% |
| !!! | ATTTCTTTTTGTCTTTTTCA+GGG | + | chr7_4:48925730-48925749 | Msa1159310:intron | 20.0% |
| !! | ATTATGTTAATTTCAGCATT+TGG | - | chr7_4:48925962-48925981 | None:intergenic | 20.0% |
| !!! | AGAATTTCTTTTTGGTAATT+TGG | + | chr7_4:48926086-48926105 | Msa1159310:three_prime_UTR | 20.0% |
| !! | TTGAATATATAATTTCTGAG+TGG | + | chr7_4:48926221-48926240 | Msa1159310:three_prime_UTR | 20.0% |
| !!! | AAGAAAAAGTGATAATGGAA+TGG | - | chr7_4:48923273-48923292 | None:intergenic | 25.0% |
| ! | TAAGGAAGAAAAAGTGATAA+TGG | - | chr7_4:48923278-48923297 | None:intergenic | 25.0% |
| ! | CAAGGATATATAAGTGTTTA+AGG | - | chr7_4:48923296-48923315 | None:intergenic | 25.0% |
| !!! | CAATTGTTCATCCATTTTTT+TGG | - | chr7_4:48923548-48923567 | None:intergenic | 25.0% |
| ! | GAAAATTCTAATGGAAAATG+TGG | + | chr7_4:48923827-48923846 | Msa1159310:CDS | 25.0% |
| ! | AATAAGCTAAAAACAGCTTA+TGG | - | chr7_4:48923986-48924005 | None:intergenic | 25.0% |
| !!! | CTTATTTTCATAAACTCTTC+AGG | + | chr7_4:48924072-48924091 | Msa1159310:intron | 25.0% |
| !! | TAAGCATTTGTGTTACTATT+TGG | + | chr7_4:48924178-48924197 | Msa1159310:intron | 25.0% |
| !!! | GTTGTTTTCATAAACCATTA+TGG | - | chr7_4:48924269-48924288 | None:intergenic | 25.0% |
| !! | ATTGAGTTGTTTATCGAAAA+TGG | + | chr7_4:48924398-48924417 | Msa1159310:intron | 25.0% |
| ! | AATAATCAAACAAGGTTGTT+TGG | - | chr7_4:48924510-48924529 | None:intergenic | 25.0% |
| ! | ACACAGAAAATAATCAAACA+AGG | - | chr7_4:48924518-48924537 | None:intergenic | 25.0% |
| ! | AAGAATATAACATTCTCACA+AGG | - | chr7_4:48924634-48924653 | None:intergenic | 25.0% |
| !! | TTTACATTTTCAGAGAAACA+TGG | - | chr7_4:48924703-48924722 | None:intergenic | 25.0% |
| !!! | GTGATTGATTTTACACAATT+GGG | - | chr7_4:48924922-48924941 | None:intergenic | 25.0% |
| !!! | TGCATTCATGTTTTAAGAAT+TGG | + | chr7_4:48924983-48925002 | Msa1159310:intron | 25.0% |
| !!! | TCATGTTTTAAGAATTGGAA+TGG | + | chr7_4:48924988-48925007 | Msa1159310:intron | 25.0% |
| !! | AATTAGGTGATATTTTCCAA+AGG | - | chr7_4:48925307-48925326 | None:intergenic | 25.0% |
| ! | AATAGAGCCTTTCAATAAAA+TGG | - | chr7_4:48925569-48925588 | None:intergenic | 25.0% |
| !!! | CATCATTAAGTTGAAGTTAA+AGG | + | chr7_4:48925934-48925953 | Msa1159310:CDS | 25.0% |
| ! | GGAATTGAATGAAATGAAAT+TGG | + | chr7_4:48926242-48926261 | Msa1159310:three_prime_UTR | 25.0% |
| !!! | AAGAAAAAGTGATAATGGAA+TGG | - | chr7_4:48923273-48923292 | None:intergenic | 25.0% |
| ! | TAAGGAAGAAAAAGTGATAA+TGG | - | chr7_4:48923278-48923297 | None:intergenic | 25.0% |
| ! | CAAGGATATATAAGTGTTTA+AGG | - | chr7_4:48923296-48923315 | None:intergenic | 25.0% |
| !!! | CAATTGTTCATCCATTTTTT+TGG | - | chr7_4:48923548-48923567 | None:intergenic | 25.0% |
| ! | GAAAATTCTAATGGAAAATG+TGG | + | chr7_4:48923827-48923846 | Msa1159310:CDS | 25.0% |
| ! | AATAAGCTAAAAACAGCTTA+TGG | - | chr7_4:48923986-48924005 | None:intergenic | 25.0% |
| !!! | CTTATTTTCATAAACTCTTC+AGG | + | chr7_4:48924072-48924091 | Msa1159310:intron | 25.0% |
| !! | TAAGCATTTGTGTTACTATT+TGG | + | chr7_4:48924178-48924197 | Msa1159310:intron | 25.0% |
| !!! | GTTGTTTTCATAAACCATTA+TGG | - | chr7_4:48924269-48924288 | None:intergenic | 25.0% |
| !! | ATTGAGTTGTTTATCGAAAA+TGG | + | chr7_4:48924398-48924417 | Msa1159310:intron | 25.0% |
| ! | AATAATCAAACAAGGTTGTT+TGG | - | chr7_4:48924510-48924529 | None:intergenic | 25.0% |
| ! | ACACAGAAAATAATCAAACA+AGG | - | chr7_4:48924518-48924537 | None:intergenic | 25.0% |
| ! | AAGAATATAACATTCTCACA+AGG | - | chr7_4:48924634-48924653 | None:intergenic | 25.0% |
| !! | TTTACATTTTCAGAGAAACA+TGG | - | chr7_4:48924703-48924722 | None:intergenic | 25.0% |
| !!! | GTGATTGATTTTACACAATT+GGG | - | chr7_4:48924922-48924941 | None:intergenic | 25.0% |
| !!! | TGCATTCATGTTTTAAGAAT+TGG | + | chr7_4:48924983-48925002 | Msa1159310:intron | 25.0% |
| !!! | TCATGTTTTAAGAATTGGAA+TGG | + | chr7_4:48924988-48925007 | Msa1159310:intron | 25.0% |
| !! | AATTAGGTGATATTTTCCAA+AGG | - | chr7_4:48925307-48925326 | None:intergenic | 25.0% |
| ! | AATAGAGCCTTTCAATAAAA+TGG | - | chr7_4:48925569-48925588 | None:intergenic | 25.0% |
| !!! | CATCATTAAGTTGAAGTTAA+AGG | + | chr7_4:48925934-48925953 | Msa1159310:CDS | 25.0% |
| ! | GGAATTGAATGAAATGAAAT+TGG | + | chr7_4:48926242-48926261 | Msa1159310:three_prime_UTR | 25.0% |
| ! | TTTCAGATAGTTTGTATGAG+AGG | + | chr7_4:48923750-48923769 | Msa1159310:CDS | 30.0% |
| AAGAACATGTTTAGAGGAAT+AGG | + | chr7_4:48923773-48923792 | Msa1159310:CDS | 30.0% | |
| TGCTTCAATTTGGTAGAAAA+AGG | + | chr7_4:48923798-48923817 | Msa1159310:CDS | 30.0% | |
| GCTTCAATTTGGTAGAAAAA+GGG | + | chr7_4:48923799-48923818 | Msa1159310:CDS | 30.0% | |
| AATTCTAATGGAAAATGTGG+TGG | + | chr7_4:48923830-48923849 | Msa1159310:CDS | 30.0% | |
| AATAAGCTAAAAACAGCTCA+TGG | - | chr7_4:48924058-48924077 | None:intergenic | 30.0% | |
| ACTTATTTGAGCTTATCTTG+TGG | + | chr7_4:48924151-48924170 | Msa1159310:intron | 30.0% | |
| ! | TTGATTATTTTCTGTGTGTG+TGG | + | chr7_4:48924521-48924540 | Msa1159310:intron | 30.0% |
| ACACGTAAGAATGCATAAAA+GGG | - | chr7_4:48924547-48924566 | None:intergenic | 30.0% | |
| TACACGTAAGAATGCATAAA+AGG | - | chr7_4:48924548-48924567 | None:intergenic | 30.0% | |
| ! | AATTTCTATTTTACAGCCAC+CGG | + | chr7_4:48924589-48924608 | Msa1159310:intron | 30.0% |
| GAGAATGTTATATTCTTGCA+TGG | + | chr7_4:48924637-48924656 | Msa1159310:CDS | 30.0% | |
| ! | TTATGTGTTCTTCCTCATTT+TGG | + | chr7_4:48924662-48924681 | Msa1159310:CDS | 30.0% |
| AAAGTGTACAAACAATCTCT+TGG | - | chr7_4:48924781-48924800 | None:intergenic | 30.0% | |
| AGATTGTTTGTACACTTTGA+AGG | + | chr7_4:48924783-48924802 | Msa1159310:CDS | 30.0% | |
| !! | GGTGATTGATTTTACACAAT+TGG | - | chr7_4:48924923-48924942 | None:intergenic | 30.0% |
| ! | CAATATCTAGTTTGAGTCTA+AGG | - | chr7_4:48924965-48924984 | None:intergenic | 30.0% |
| TGGAATGGTATGAACTATAT+TGG | + | chr7_4:48925003-48925022 | Msa1159310:intron | 30.0% | |
| ! | CAAGTTTTGCATCAAACTTT+TGG | - | chr7_4:48925139-48925158 | None:intergenic | 30.0% |
| CAAAAGTTTGATGCAAAACT+TGG | + | chr7_4:48925137-48925156 | Msa1159310:intron | 30.0% | |
| !!! | ATTTCTTCTTATGGTTTTGG+TGG | + | chr7_4:48925336-48925355 | Msa1159310:intron | 30.0% |
| TGTGATTTCTGCAATAGATT+AGG | - | chr7_4:48925499-48925518 | None:intergenic | 30.0% | |
| TAATCTATTGCAGAAATCAC+AGG | + | chr7_4:48925498-48925517 | Msa1159310:CDS | 30.0% | |
| TGAATGAAATGAAATTGGTC+AGG | + | chr7_4:48926247-48926266 | Msa1159310:three_prime_UTR | 30.0% | |
| ! | TTTCAGATAGTTTGTATGAG+AGG | + | chr7_4:48923750-48923769 | Msa1159310:CDS | 30.0% |
| AAGAACATGTTTAGAGGAAT+AGG | + | chr7_4:48923773-48923792 | Msa1159310:CDS | 30.0% | |
| TGCTTCAATTTGGTAGAAAA+AGG | + | chr7_4:48923798-48923817 | Msa1159310:CDS | 30.0% | |
| GCTTCAATTTGGTAGAAAAA+GGG | + | chr7_4:48923799-48923818 | Msa1159310:CDS | 30.0% | |
| AATTCTAATGGAAAATGTGG+TGG | + | chr7_4:48923830-48923849 | Msa1159310:CDS | 30.0% | |
| AATAAGCTAAAAACAGCTCA+TGG | - | chr7_4:48924058-48924077 | None:intergenic | 30.0% | |
| ACTTATTTGAGCTTATCTTG+TGG | + | chr7_4:48924151-48924170 | Msa1159310:intron | 30.0% | |
| ! | TTGATTATTTTCTGTGTGTG+TGG | + | chr7_4:48924521-48924540 | Msa1159310:intron | 30.0% |
| ACACGTAAGAATGCATAAAA+GGG | - | chr7_4:48924547-48924566 | None:intergenic | 30.0% | |
| TACACGTAAGAATGCATAAA+AGG | - | chr7_4:48924548-48924567 | None:intergenic | 30.0% | |
| ! | AATTTCTATTTTACAGCCAC+CGG | + | chr7_4:48924589-48924608 | Msa1159310:intron | 30.0% |
| GAGAATGTTATATTCTTGCA+TGG | + | chr7_4:48924637-48924656 | Msa1159310:CDS | 30.0% | |
| ! | TTATGTGTTCTTCCTCATTT+TGG | + | chr7_4:48924662-48924681 | Msa1159310:CDS | 30.0% |
| AAAGTGTACAAACAATCTCT+TGG | - | chr7_4:48924781-48924800 | None:intergenic | 30.0% | |
| AGATTGTTTGTACACTTTGA+AGG | + | chr7_4:48924783-48924802 | Msa1159310:CDS | 30.0% | |
| !! | GGTGATTGATTTTACACAAT+TGG | - | chr7_4:48924923-48924942 | None:intergenic | 30.0% |
| ! | CAATATCTAGTTTGAGTCTA+AGG | - | chr7_4:48924965-48924984 | None:intergenic | 30.0% |
| TGGAATGGTATGAACTATAT+TGG | + | chr7_4:48925003-48925022 | Msa1159310:intron | 30.0% | |
| ! | CAAGTTTTGCATCAAACTTT+TGG | - | chr7_4:48925139-48925158 | None:intergenic | 30.0% |
| CAAAAGTTTGATGCAAAACT+TGG | + | chr7_4:48925137-48925156 | Msa1159310:intron | 30.0% | |
| !!! | ATTTCTTCTTATGGTTTTGG+TGG | + | chr7_4:48925336-48925355 | Msa1159310:intron | 30.0% |
| TGTGATTTCTGCAATAGATT+AGG | - | chr7_4:48925499-48925518 | None:intergenic | 30.0% | |
| TAATCTATTGCAGAAATCAC+AGG | + | chr7_4:48925498-48925517 | Msa1159310:CDS | 30.0% | |
| TGAATGAAATGAAATTGGTC+AGG | + | chr7_4:48926247-48926266 | Msa1159310:three_prime_UTR | 30.0% | |
| !! | AAGTGATAATGGAATGGAGA+GGG | - | chr7_4:48923267-48923286 | None:intergenic | 35.0% |
| !! | AAAGTGATAATGGAATGGAG+AGG | - | chr7_4:48923268-48923287 | None:intergenic | 35.0% |
| AGTACTACATCAAAGAGACA+AGG | - | chr7_4:48923314-48923333 | None:intergenic | 35.0% | |
| CATCAAGAAGATCAAAGATG+AGG | - | chr7_4:48923610-48923629 | None:intergenic | 35.0% | |
| !! | TCCTTGTTGTTGCTCTAAAT+GGG | + | chr7_4:48923685-48923704 | Msa1159310:CDS | 35.0% |
| GTGATGAATGATGAAGATGA+TGG | + | chr7_4:48923725-48923744 | Msa1159310:CDS | 35.0% | |
| ! | GGAATAGGTTTGCTTCAATT+TGG | + | chr7_4:48923788-48923807 | Msa1159310:CDS | 35.0% |
| TCAATTTGGTAGAAAAAGGG+AGG | + | chr7_4:48923802-48923821 | Msa1159310:CDS | 35.0% | |
| AGGGAGGAAGAAAATTCTAA+TGG | + | chr7_4:48923818-48923837 | Msa1159310:CDS | 35.0% | |
| ! | ATGTGAGTCTTGTCTTTCAT+GGG | + | chr7_4:48923883-48923902 | Msa1159310:CDS | 35.0% |
| GTTGTTAAGGAACCCTTAAT+AGG | + | chr7_4:48923941-48923960 | Msa1159310:CDS | 35.0% | |
| TAAGGAACCCTTAATAGGTA+TGG | + | chr7_4:48923946-48923965 | Msa1159310:intron | 35.0% | |
| ACAGCTACCATACCTATTAA+GGG | - | chr7_4:48923956-48923975 | None:intergenic | 35.0% | |
| TACAGCTACCATACCTATTA+AGG | - | chr7_4:48923957-48923976 | None:intergenic | 35.0% | |
| ATTGATTGCTATAGACCTGT+TGG | + | chr7_4:48924735-48924754 | Msa1159310:CDS | 35.0% | |
| TTGATTGCTATAGACCTGTT+GGG | + | chr7_4:48924736-48924755 | Msa1159310:CDS | 35.0% | |
| TACAAACAATCTCTTGGCTT+TGG | - | chr7_4:48924775-48924794 | None:intergenic | 35.0% | |
| GGAAATGATTGAGAAATCTG+TGG | + | chr7_4:48924813-48924832 | Msa1159310:CDS | 35.0% | |
| TGAAAACTACCTAACTGCAA+TGG | - | chr7_4:48924844-48924863 | None:intergenic | 35.0% | |
| ! | TTTGAGTCTAAGGTACTTAC+AGG | - | chr7_4:48924955-48924974 | None:intergenic | 35.0% |
| ! | AAAGCACTTGAAAAGTTTGC+TGG | + | chr7_4:48925398-48925417 | Msa1159310:CDS | 35.0% |
| !! | AGTTTGCTGGAAAGAAATTG+TGG | + | chr7_4:48925411-48925430 | Msa1159310:CDS | 35.0% |
| ! | CTGGTTCTTCATTTATGTCA+TGG | + | chr7_4:48925447-48925466 | Msa1159310:CDS | 35.0% |
| TAAAGTTCATTACTCGCAAG+AGG | + | chr7_4:48925537-48925556 | Msa1159310:CDS | 35.0% | |
| GACATTGTCATTGTCATATC+CGG | - | chr7_4:48925611-48925630 | None:intergenic | 35.0% | |
| ! | TTCTTGATAACAGACATGAC+TGG | + | chr7_4:48925761-48925780 | Msa1159310:CDS | 35.0% |
| TCCATGCATAATGTGATATG+TGG | + | chr7_4:48925809-48925828 | Msa1159310:CDS | 35.0% | |
| CCATGCATAATGTGATATGT+GGG | + | chr7_4:48925810-48925829 | Msa1159310:CDS | 35.0% | |
| CATGCATAATGTGATATGTG+GGG | + | chr7_4:48925811-48925830 | Msa1159310:CDS | 35.0% | |
| ATGCATAATGTGATATGTGG+GGG | + | chr7_4:48925812-48925831 | Msa1159310:CDS | 35.0% | |
| ACTTAATGATGCACTCCTTT+GGG | - | chr7_4:48925925-48925944 | None:intergenic | 35.0% | |
| AACTTAATGATGCACTCCTT+TGG | - | chr7_4:48925926-48925945 | None:intergenic | 35.0% | |
| !! | AAGTGATAATGGAATGGAGA+GGG | - | chr7_4:48923267-48923286 | None:intergenic | 35.0% |
| !! | AAAGTGATAATGGAATGGAG+AGG | - | chr7_4:48923268-48923287 | None:intergenic | 35.0% |
| AGTACTACATCAAAGAGACA+AGG | - | chr7_4:48923314-48923333 | None:intergenic | 35.0% | |
| CATCAAGAAGATCAAAGATG+AGG | - | chr7_4:48923610-48923629 | None:intergenic | 35.0% | |
| !! | TCCTTGTTGTTGCTCTAAAT+GGG | + | chr7_4:48923685-48923704 | Msa1159310:CDS | 35.0% |
| GTGATGAATGATGAAGATGA+TGG | + | chr7_4:48923725-48923744 | Msa1159310:CDS | 35.0% | |
| ! | GGAATAGGTTTGCTTCAATT+TGG | + | chr7_4:48923788-48923807 | Msa1159310:CDS | 35.0% |
| TCAATTTGGTAGAAAAAGGG+AGG | + | chr7_4:48923802-48923821 | Msa1159310:CDS | 35.0% | |
| AGGGAGGAAGAAAATTCTAA+TGG | + | chr7_4:48923818-48923837 | Msa1159310:CDS | 35.0% | |
| ! | ATGTGAGTCTTGTCTTTCAT+GGG | + | chr7_4:48923883-48923902 | Msa1159310:CDS | 35.0% |
| GTTGTTAAGGAACCCTTAAT+AGG | + | chr7_4:48923941-48923960 | Msa1159310:CDS | 35.0% | |
| TAAGGAACCCTTAATAGGTA+TGG | + | chr7_4:48923946-48923965 | Msa1159310:intron | 35.0% | |
| ACAGCTACCATACCTATTAA+GGG | - | chr7_4:48923956-48923975 | None:intergenic | 35.0% | |
| TACAGCTACCATACCTATTA+AGG | - | chr7_4:48923957-48923976 | None:intergenic | 35.0% | |
| ATTGATTGCTATAGACCTGT+TGG | + | chr7_4:48924735-48924754 | Msa1159310:CDS | 35.0% | |
| TTGATTGCTATAGACCTGTT+GGG | + | chr7_4:48924736-48924755 | Msa1159310:CDS | 35.0% | |
| TACAAACAATCTCTTGGCTT+TGG | - | chr7_4:48924775-48924794 | None:intergenic | 35.0% | |
| GGAAATGATTGAGAAATCTG+TGG | + | chr7_4:48924813-48924832 | Msa1159310:CDS | 35.0% | |
| TGAAAACTACCTAACTGCAA+TGG | - | chr7_4:48924844-48924863 | None:intergenic | 35.0% | |
| ! | TTTGAGTCTAAGGTACTTAC+AGG | - | chr7_4:48924955-48924974 | None:intergenic | 35.0% |
| ! | AAAGCACTTGAAAAGTTTGC+TGG | + | chr7_4:48925398-48925417 | Msa1159310:CDS | 35.0% |
| !! | AGTTTGCTGGAAAGAAATTG+TGG | + | chr7_4:48925411-48925430 | Msa1159310:CDS | 35.0% |
| ! | CTGGTTCTTCATTTATGTCA+TGG | + | chr7_4:48925447-48925466 | Msa1159310:CDS | 35.0% |
| TAAAGTTCATTACTCGCAAG+AGG | + | chr7_4:48925537-48925556 | Msa1159310:CDS | 35.0% | |
| GACATTGTCATTGTCATATC+CGG | - | chr7_4:48925611-48925630 | None:intergenic | 35.0% | |
| ! | TTCTTGATAACAGACATGAC+TGG | + | chr7_4:48925761-48925780 | Msa1159310:CDS | 35.0% |
| TCCATGCATAATGTGATATG+TGG | + | chr7_4:48925809-48925828 | Msa1159310:CDS | 35.0% | |
| CCATGCATAATGTGATATGT+GGG | + | chr7_4:48925810-48925829 | Msa1159310:CDS | 35.0% | |
| CATGCATAATGTGATATGTG+GGG | + | chr7_4:48925811-48925830 | Msa1159310:CDS | 35.0% | |
| ATGCATAATGTGATATGTGG+GGG | + | chr7_4:48925812-48925831 | Msa1159310:CDS | 35.0% | |
| ACTTAATGATGCACTCCTTT+GGG | - | chr7_4:48925925-48925944 | None:intergenic | 35.0% | |
| AACTTAATGATGCACTCCTT+TGG | - | chr7_4:48925926-48925945 | None:intergenic | 35.0% | |
| CTAGAGACATTGAGTGGTAT+TGG | - | chr7_4:48923505-48923524 | None:intergenic | 40.0% | |
| AAACTGCTAGAGACATTGAG+TGG | - | chr7_4:48923511-48923530 | None:intergenic | 40.0% | |
| !!! | CATCCATTTTTTTGGTGAGC+AGG | - | chr7_4:48923540-48923559 | None:intergenic | 40.0% |
| TACCTTGATGAACGCATTGA+TGG | + | chr7_4:48923653-48923672 | Msa1159310:CDS | 40.0% | |
| ! | ACCTTGATGAACGCATTGAT+GGG | + | chr7_4:48923654-48923673 | Msa1159310:CDS | 40.0% |
| ! | TTTAGAGCAACAACAAGGAG+AGG | - | chr7_4:48923684-48923703 | None:intergenic | 40.0% |
| !! | CTCCTTGTTGTTGCTCTAAA+TGG | + | chr7_4:48923684-48923703 | Msa1159310:CDS | 40.0% |
| ! | TCCCATTTAGAGCAACAACA+AGG | - | chr7_4:48923689-48923708 | None:intergenic | 40.0% |
| GAGAGGAAGAACATGTTTAG+AGG | + | chr7_4:48923767-48923786 | Msa1159310:CDS | 40.0% | |
| ! | CTAATGGAAAATGTGGTGGA+AGG | + | chr7_4:48923834-48923853 | Msa1159310:CDS | 40.0% |
| GTGGAAGGATAGTGAAAAGT+TGG | + | chr7_4:48923849-48923868 | Msa1159310:CDS | 40.0% | |
| ! | GTGAAAAGTTGGTCTGATTG+TGG | + | chr7_4:48923860-48923879 | Msa1159310:CDS | 40.0% |
| ! | GATGTGAGTCTTGTCTTTCA+TGG | + | chr7_4:48923882-48923901 | Msa1159310:CDS | 40.0% |
| TCTTGTCTTTCATGGGTGAA+TGG | + | chr7_4:48923890-48923909 | Msa1159310:CDS | 40.0% | |
| CTTTCACAAGCTCTCCATAA+TGG | + | chr7_4:48924252-48924271 | Msa1159310:intron | 40.0% | |
| CACTGTTTGAGTCCAAAATG+AGG | - | chr7_4:48924677-48924696 | None:intergenic | 40.0% | |
| ! | GTACACTTTGAAGGATCATG+TGG | + | chr7_4:48924792-48924811 | Msa1159310:CDS | 40.0% |
| ! | GCAGTTAGGTAGTTTTCATC+TGG | + | chr7_4:48924846-48924865 | Msa1159310:CDS | 40.0% |
| TATGGGCAGTGTAATTGCAT+TGG | + | chr7_4:48924879-48924898 | Msa1159310:CDS | 40.0% | |
| !! | CAGTGTAATTGCATTGGCTT+TGG | + | chr7_4:48924885-48924904 | Msa1159310:CDS | 40.0% |
| GAAGAACCAGCTGATAACAT+TGG | - | chr7_4:48925437-48925456 | None:intergenic | 40.0% | |
| TATGTCATGGTACGAGCATT+TGG | + | chr7_4:48925460-48925479 | Msa1159310:CDS | 40.0% | |
| ATGTCATGGTACGAGCATTT+GGG | + | chr7_4:48925461-48925480 | Msa1159310:CDS | 40.0% | |
| ATTGCAGAAATCACAGGATG+TGG | + | chr7_4:48925504-48925523 | Msa1159310:CDS | 40.0% | |
| TTGCAGAAATCACAGGATGT+GGG | + | chr7_4:48925505-48925524 | Msa1159310:CDS | 40.0% | |
| GTAAAAGACACAACACACAC+CGG | + | chr7_4:48925589-48925608 | Msa1159310:intron | 40.0% | |
| ACTGGACATACTCATCAATC+AGG | + | chr7_4:48925779-48925798 | Msa1159310:CDS | 40.0% | |
| GACATACTCATCAATCAGGT+TGG | + | chr7_4:48925783-48925802 | Msa1159310:CDS | 40.0% | |
| CCCACATATCACATTATGCA+TGG | - | chr7_4:48925813-48925832 | None:intergenic | 40.0% | |
| ! | TAGAGATCAAGTTGTCCCAA+AGG | + | chr7_4:48925907-48925926 | Msa1159310:CDS | 40.0% |
| GAAGCAATTTGCACAAAGTC+TGG | + | chr7_4:48926021-48926040 | Msa1159310:CDS | 40.0% | |
| ! | ACAAAGTCTGGAGCATACAT+GGG | + | chr7_4:48926033-48926052 | Msa1159310:CDS | 40.0% |
| CTAGAGACATTGAGTGGTAT+TGG | - | chr7_4:48923505-48923524 | None:intergenic | 40.0% | |
| AAACTGCTAGAGACATTGAG+TGG | - | chr7_4:48923511-48923530 | None:intergenic | 40.0% | |
| !!! | CATCCATTTTTTTGGTGAGC+AGG | - | chr7_4:48923540-48923559 | None:intergenic | 40.0% |
| TACCTTGATGAACGCATTGA+TGG | + | chr7_4:48923653-48923672 | Msa1159310:CDS | 40.0% | |
| ! | ACCTTGATGAACGCATTGAT+GGG | + | chr7_4:48923654-48923673 | Msa1159310:CDS | 40.0% |
| ! | TTTAGAGCAACAACAAGGAG+AGG | - | chr7_4:48923684-48923703 | None:intergenic | 40.0% |
| !! | CTCCTTGTTGTTGCTCTAAA+TGG | + | chr7_4:48923684-48923703 | Msa1159310:CDS | 40.0% |
| ! | TCCCATTTAGAGCAACAACA+AGG | - | chr7_4:48923689-48923708 | None:intergenic | 40.0% |
| GAGAGGAAGAACATGTTTAG+AGG | + | chr7_4:48923767-48923786 | Msa1159310:CDS | 40.0% | |
| ! | CTAATGGAAAATGTGGTGGA+AGG | + | chr7_4:48923834-48923853 | Msa1159310:CDS | 40.0% |
| GTGGAAGGATAGTGAAAAGT+TGG | + | chr7_4:48923849-48923868 | Msa1159310:CDS | 40.0% | |
| ! | GTGAAAAGTTGGTCTGATTG+TGG | + | chr7_4:48923860-48923879 | Msa1159310:CDS | 40.0% |
| ! | GATGTGAGTCTTGTCTTTCA+TGG | + | chr7_4:48923882-48923901 | Msa1159310:CDS | 40.0% |
| TCTTGTCTTTCATGGGTGAA+TGG | + | chr7_4:48923890-48923909 | Msa1159310:CDS | 40.0% | |
| CTTTCACAAGCTCTCCATAA+TGG | + | chr7_4:48924252-48924271 | Msa1159310:intron | 40.0% | |
| CACTGTTTGAGTCCAAAATG+AGG | - | chr7_4:48924677-48924696 | None:intergenic | 40.0% | |
| ! | GTACACTTTGAAGGATCATG+TGG | + | chr7_4:48924792-48924811 | Msa1159310:CDS | 40.0% |
| ! | GCAGTTAGGTAGTTTTCATC+TGG | + | chr7_4:48924846-48924865 | Msa1159310:CDS | 40.0% |
| TATGGGCAGTGTAATTGCAT+TGG | + | chr7_4:48924879-48924898 | Msa1159310:CDS | 40.0% | |
| !! | CAGTGTAATTGCATTGGCTT+TGG | + | chr7_4:48924885-48924904 | Msa1159310:CDS | 40.0% |
| GAAGAACCAGCTGATAACAT+TGG | - | chr7_4:48925437-48925456 | None:intergenic | 40.0% | |
| TATGTCATGGTACGAGCATT+TGG | + | chr7_4:48925460-48925479 | Msa1159310:CDS | 40.0% | |
| ATGTCATGGTACGAGCATTT+GGG | + | chr7_4:48925461-48925480 | Msa1159310:CDS | 40.0% | |
| ATTGCAGAAATCACAGGATG+TGG | + | chr7_4:48925504-48925523 | Msa1159310:CDS | 40.0% | |
| TTGCAGAAATCACAGGATGT+GGG | + | chr7_4:48925505-48925524 | Msa1159310:CDS | 40.0% | |
| GTAAAAGACACAACACACAC+CGG | + | chr7_4:48925589-48925608 | Msa1159310:intron | 40.0% | |
| ACTGGACATACTCATCAATC+AGG | + | chr7_4:48925779-48925798 | Msa1159310:CDS | 40.0% | |
| GACATACTCATCAATCAGGT+TGG | + | chr7_4:48925783-48925802 | Msa1159310:CDS | 40.0% | |
| CCCACATATCACATTATGCA+TGG | - | chr7_4:48925813-48925832 | None:intergenic | 40.0% | |
| ! | TAGAGATCAAGTTGTCCCAA+AGG | + | chr7_4:48925907-48925926 | Msa1159310:CDS | 40.0% |
| GAAGCAATTTGCACAAAGTC+TGG | + | chr7_4:48926021-48926040 | Msa1159310:CDS | 40.0% | |
| ! | ACAAAGTCTGGAGCATACAT+GGG | + | chr7_4:48926033-48926052 | Msa1159310:CDS | 40.0% |
| GAGCAAGTGGAAATGCGTTT+AGG | - | chr7_4:48923245-48923264 | None:intergenic | 45.0% | |
| !!! | CCATTTTTTTGGTGAGCAGG+AGG | - | chr7_4:48923537-48923556 | None:intergenic | 45.0% |
| CCTCCTGCTCACCAAAAAAA+TGG | + | chr7_4:48923534-48923553 | Msa1159310:CDS | 45.0% | |
| ! | CCTTGATGAACGCATTGATG+GGG | + | chr7_4:48923655-48923674 | Msa1159310:CDS | 45.0% |
| ATGGGAGAGACAGAAGAAGA+TGG | + | chr7_4:48923703-48923722 | Msa1159310:CDS | 45.0% | |
| TGTCTTTCATGGGTGAATGG+TGG | + | chr7_4:48923893-48923912 | Msa1159310:CDS | 45.0% | |
| GCTCTTTCAAACAGTCTCAC+AGG | - | chr7_4:48924024-48924043 | None:intergenic | 45.0% | |
| GCTATAGACCTGTTGGGATT+TGG | + | chr7_4:48924742-48924761 | Msa1159310:CDS | 45.0% | |
| GACTCTTTCCAAATCCCAAC+AGG | - | chr7_4:48924753-48924772 | None:intergenic | 45.0% | |
| GTGGTTCAACCATTGCAGTT+AGG | + | chr7_4:48924832-48924851 | Msa1159310:CDS | 45.0% | |
| TCATCTGGTTGCACACTCTA+TGG | + | chr7_4:48924861-48924880 | Msa1159310:CDS | 45.0% | |
| CATCTGGTTGCACACTCTAT+GGG | + | chr7_4:48924862-48924881 | Msa1159310:CDS | 45.0% | |
| GGTACTTACAGGAGCAACAA+GGG | - | chr7_4:48924944-48924963 | None:intergenic | 45.0% | |
| AGGTACTTACAGGAGCAACA+AGG | - | chr7_4:48924945-48924964 | None:intergenic | 45.0% | |
| TGAACAAGCATCATTGCCCT+CGG | - | chr7_4:48925378-48925397 | None:intergenic | 45.0% | |
| TTGTGGCCAATGTTATCAGC+TGG | + | chr7_4:48925428-48925447 | Msa1159310:CDS | 45.0% | |
| ATGTGGGGGAGCAAAATTCA+TGG | + | chr7_4:48925826-48925845 | Msa1159310:CDS | 45.0% | |
| ACAGTGCTGTGATCTGCATT+TGG | - | chr7_4:48925986-48926005 | None:intergenic | 45.0% | |
| ! | GATCACAGCACTGTGCTATT+AGG | + | chr7_4:48925992-48926011 | Msa1159310:CDS | 45.0% |
| ! | CACAAAGTCTGGAGCATACA+TGG | + | chr7_4:48926032-48926051 | Msa1159310:CDS | 45.0% |
| GAGCAAGTGGAAATGCGTTT+AGG | - | chr7_4:48923245-48923264 | None:intergenic | 45.0% | |
| !!! | CCATTTTTTTGGTGAGCAGG+AGG | - | chr7_4:48923537-48923556 | None:intergenic | 45.0% |
| CCTCCTGCTCACCAAAAAAA+TGG | + | chr7_4:48923534-48923553 | Msa1159310:CDS | 45.0% | |
| ! | CCTTGATGAACGCATTGATG+GGG | + | chr7_4:48923655-48923674 | Msa1159310:CDS | 45.0% |
| ATGGGAGAGACAGAAGAAGA+TGG | + | chr7_4:48923703-48923722 | Msa1159310:CDS | 45.0% | |
| TGTCTTTCATGGGTGAATGG+TGG | + | chr7_4:48923893-48923912 | Msa1159310:CDS | 45.0% | |
| GCTCTTTCAAACAGTCTCAC+AGG | - | chr7_4:48924024-48924043 | None:intergenic | 45.0% | |
| GCTATAGACCTGTTGGGATT+TGG | + | chr7_4:48924742-48924761 | Msa1159310:CDS | 45.0% | |
| GACTCTTTCCAAATCCCAAC+AGG | - | chr7_4:48924753-48924772 | None:intergenic | 45.0% | |
| GTGGTTCAACCATTGCAGTT+AGG | + | chr7_4:48924832-48924851 | Msa1159310:CDS | 45.0% | |
| TCATCTGGTTGCACACTCTA+TGG | + | chr7_4:48924861-48924880 | Msa1159310:CDS | 45.0% | |
| CATCTGGTTGCACACTCTAT+GGG | + | chr7_4:48924862-48924881 | Msa1159310:CDS | 45.0% | |
| GGTACTTACAGGAGCAACAA+GGG | - | chr7_4:48924944-48924963 | None:intergenic | 45.0% | |
| AGGTACTTACAGGAGCAACA+AGG | - | chr7_4:48924945-48924964 | None:intergenic | 45.0% | |
| TGAACAAGCATCATTGCCCT+CGG | - | chr7_4:48925378-48925397 | None:intergenic | 45.0% | |
| TTGTGGCCAATGTTATCAGC+TGG | + | chr7_4:48925428-48925447 | Msa1159310:CDS | 45.0% | |
| ATGTGGGGGAGCAAAATTCA+TGG | + | chr7_4:48925826-48925845 | Msa1159310:CDS | 45.0% | |
| ACAGTGCTGTGATCTGCATT+TGG | - | chr7_4:48925986-48926005 | None:intergenic | 45.0% | |
| ! | GATCACAGCACTGTGCTATT+AGG | + | chr7_4:48925992-48926011 | Msa1159310:CDS | 45.0% |
| ! | CACAAAGTCTGGAGCATACA+TGG | + | chr7_4:48926032-48926051 | Msa1159310:CDS | 45.0% |
| CCCCATCAATGCGTTCATCA+AGG | - | chr7_4:48923658-48923677 | None:intergenic | 50.0% | |
| ! | TGATGAACGCATTGATGGGG+TGG | + | chr7_4:48923658-48923677 | Msa1159310:CDS | 50.0% |
| ! | CTCTCCCTTGCAGTTTTCAC+CGG | - | chr7_4:48924611-48924630 | None:intergenic | 50.0% |
| TCAGACACACACTTCGCCTT+TGG | + | chr7_4:48925288-48925307 | Msa1159310:intron | 50.0% | |
| TTGCCCTCGGAAGAAGAGTA+CGG | - | chr7_4:48925365-48925384 | None:intergenic | 50.0% | |
| GAAATCACAGGATGTGGGAG+AGG | + | chr7_4:48925510-48925529 | Msa1159310:CDS | 50.0% | |
| CCCCATCAATGCGTTCATCA+AGG | - | chr7_4:48923658-48923677 | None:intergenic | 50.0% | |
| ! | TGATGAACGCATTGATGGGG+TGG | + | chr7_4:48923658-48923677 | Msa1159310:CDS | 50.0% |
| ! | CTCTCCCTTGCAGTTTTCAC+CGG | - | chr7_4:48924611-48924630 | None:intergenic | 50.0% |
| TCAGACACACACTTCGCCTT+TGG | + | chr7_4:48925288-48925307 | Msa1159310:intron | 50.0% | |
| TTGCCCTCGGAAGAAGAGTA+CGG | - | chr7_4:48925365-48925384 | None:intergenic | 50.0% | |
| GAAATCACAGGATGTGGGAG+AGG | + | chr7_4:48925510-48925529 | Msa1159310:CDS | 50.0% | |
| TGGAATGGAGAGGGAGCAAG+TGG | - | chr7_4:48923258-48923277 | None:intergenic | 55.0% | |
| AGCCACCGGTGAAAACTGCA+AGG | + | chr7_4:48924603-48924622 | Msa1159310:intron | 55.0% | |
| GCCACCGGTGAAAACTGCAA+GGG | + | chr7_4:48924604-48924623 | Msa1159310:intron | 55.0% | |
| ! | TCCCTTGCAGTTTTCACCGG+TGG | - | chr7_4:48924608-48924627 | None:intergenic | 55.0% |
| CAGCCGTACTCTTCTTCCGA+GGG | + | chr7_4:48925359-48925378 | Msa1159310:intron | 55.0% | |
| TGGAATGGAGAGGGAGCAAG+TGG | - | chr7_4:48923258-48923277 | None:intergenic | 55.0% | |
| AGCCACCGGTGAAAACTGCA+AGG | + | chr7_4:48924603-48924622 | Msa1159310:intron | 55.0% | |
| GCCACCGGTGAAAACTGCAA+GGG | + | chr7_4:48924604-48924623 | Msa1159310:intron | 55.0% | |
| ! | TCCCTTGCAGTTTTCACCGG+TGG | - | chr7_4:48924608-48924627 | None:intergenic | 55.0% |
| CAGCCGTACTCTTCTTCCGA+GGG | + | chr7_4:48925359-48925378 | Msa1159310:intron | 55.0% | |
| GCAGCCGTACTCTTCTTCCG+AGG | + | chr7_4:48925358-48925377 | Msa1159310:intron | 60.0% | |
| GCAGCCGTACTCTTCTTCCG+AGG | + | chr7_4:48925358-48925377 | Msa1159310:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 48923236 | 48926283 | 48923236 | ID=Msa1159310;Name=Msa1159310 |
| chr7_4 | mRNA | 48923236 | 48926283 | 48923236 | ID=Msa1159310-mRNA-1;Parent=Msa1159310;Name=Msa1159310-mRNA-1;_AED=0.02;_eAED=0.02;_QI=279|1|1|1|1|1|4|217|436 |
| chr7_4 | exon | 48923236 | 48923962 | 48923236 | ID=Msa1159310-mRNA-1:exon:13314;Parent=Msa1159310-mRNA-1 |
| chr7_4 | exon | 48924605 | 48924954 | 48924605 | ID=Msa1159310-mRNA-1:exon:13315;Parent=Msa1159310-mRNA-1 |
| chr7_4 | exon | 48925362 | 48925558 | 48925362 | ID=Msa1159310-mRNA-1:exon:13316;Parent=Msa1159310-mRNA-1 |
| chr7_4 | exon | 48925751 | 48926283 | 48925751 | ID=Msa1159310-mRNA-1:exon:13317;Parent=Msa1159310-mRNA-1 |
| chr7_4 | five_prime_UTR | 48923236 | 48923514 | 48923236 | ID=Msa1159310-mRNA-1:five_prime_utr;Parent=Msa1159310-mRNA-1 |
| chr7_4 | CDS | 48923515 | 48923962 | 48923515 | ID=Msa1159310-mRNA-1:cds;Parent=Msa1159310-mRNA-1 |
| chr7_4 | CDS | 48924605 | 48924954 | 48924605 | ID=Msa1159310-mRNA-1:cds;Parent=Msa1159310-mRNA-1 |
| chr7_4 | CDS | 48925362 | 48925558 | 48925362 | ID=Msa1159310-mRNA-1:cds;Parent=Msa1159310-mRNA-1 |
| chr7_4 | CDS | 48925751 | 48926066 | 48925751 | ID=Msa1159310-mRNA-1:cds;Parent=Msa1159310-mRNA-1 |
| chr7_4 | three_prime_UTR | 48926067 | 48926283 | 48926067 | ID=Msa1159310-mRNA-1:three_prime_utr;Parent=Msa1159310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
