Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1163770 | XP_024625750.1 | 96.536 | 866 | 29 | 1 | 1 | 865 | 1 | 866 | 0.0 | 1753 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1163770 | sp|Q8RUS5|ATG9_ARATH | 65.533 | 882 | 265 | 15 | 1 | 862 | 2 | 864 | 0.0 | 1121 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1163770 | A0A396H5X9 | 96.536 | 866 | 29 | 1 | 1 | 865 | 1 | 866 | 0.0 | 1753 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1163560 | Msa1163770 | 0.933457 | 1.824152e-95 | -8.615850e-47 |
Msa1163760 | Msa1163770 | 0.927520 | 1.048931e-91 | -8.615850e-47 |
Msa1163770 | Msa1170100 | 0.979562 | 3.062070e-148 | -8.615850e-47 |
Msa1163770 | Msa1170580 | 0.950827 | 7.344756e-109 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1163770 | MtrunA17_Chr7g0261081 | 96.536 | 866 | 29 | 1 | 1 | 865 | 1 | 866 | 0.0 | 1753 |
Msa1163770 | MtrunA17_Chr1g0184191 | 77.560 | 869 | 188 | 6 | 1 | 865 | 1 | 866 | 0.0 | 1395 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1163770 | AT2G31260.1 | 65.533 | 882 | 265 | 15 | 1 | 862 | 2 | 864 | 0.0 | 1121 |
Find 248 sgRNAs with CRISPR-Local
Find 427 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCTTCTTTGAAAGACTTTA+TGG | 0.100521 | 7_4:+55137393 | Msa1163770:CDS |
GAATTTATAGTGGGAGTTTC+TGG | 0.112453 | 7_4:-55141823 | None:intergenic |
GTCCCTCTCTAATTGTTATT+TGG | 0.145427 | 7_4:+55141953 | Msa1163770:three_prime_UTR |
AACTGCTTCCCCTGAGTATT+TGG | 0.152672 | 7_4:-55141061 | None:intergenic |
AACAACTTTGTCAACAATTT+TGG | 0.153920 | 7_4:-55137904 | None:intergenic |
GAAGGGTGCTTTCAATTAAA+TGG | 0.190594 | 7_4:+55141904 | Msa1163770:three_prime_UTR |
GGAGAATTTAATCTACATTT+TGG | 0.223978 | 7_4:+55141781 | Msa1163770:CDS |
AAAATATCATTGCAGATATT+TGG | 0.224381 | 7_4:+55139876 | Msa1163770:intron |
CCCTTGAATGGACTTTAAAT+TGG | 0.245163 | 7_4:+55138135 | Msa1163770:CDS |
TGTAGAACCAATTGCTGATT+TGG | 0.253494 | 7_4:+55137368 | Msa1163770:CDS |
CCCATTTCACAATGGTTTCC+AGG | 0.256603 | 7_4:+55138050 | Msa1163770:CDS |
GTAAGTGTGAGTGGGGTTAA+AGG | 0.263267 | 7_4:-55137618 | None:intergenic |
GTCTTCATCCCCTGCCGTAT+TGG | 0.264537 | 7_4:-55141176 | None:intergenic |
CGGAAGGAGAACTACTTAAT+TGG | 0.265768 | 7_4:+55137999 | Msa1163770:CDS |
GTTATTCCATATGGTTCTAA+TGG | 0.268064 | 7_4:-55141358 | None:intergenic |
CTGCTACGAGAGGCATTATA+TGG | 0.271120 | 7_4:-55140637 | None:intergenic |
TTCTAGCCCACCAATGGCTT+CGG | 0.278161 | 7_4:-55141567 | None:intergenic |
CAGGACTAGATTGAACTTTC+GGG | 0.278462 | 7_4:-55138079 | None:intergenic |
TCTGAAGGGCTCTCACTTCC+TGG | 0.293553 | 7_4:-55137321 | None:intergenic |
TCTTCATCCCCTGCCGTATT+GGG | 0.293680 | 7_4:-55141175 | None:intergenic |
TCCAGTAAAAGTGTTGTTCT+TGG | 0.302842 | 7_4:-55141705 | None:intergenic |
CCTCATCAGCTCCCATCCTT+AGG | 0.305842 | 7_4:+55141497 | Msa1163770:CDS |
TGCAATTGCAGATGAGCTTC+TGG | 0.319750 | 7_4:+55139956 | Msa1163770:CDS |
GGGCTCTCACTTCCTGGACT+TGG | 0.325164 | 7_4:-55137315 | None:intergenic |
TCAGGACTAGATTGAACTTT+CGG | 0.327003 | 7_4:-55138080 | None:intergenic |
GAAGATAGGGGTGATTATTC+TGG | 0.327635 | 7_4:-55141285 | None:intergenic |
AGCTATTATTGTTGGATACT+TGG | 0.328327 | 7_4:+55137644 | Msa1163770:CDS |
AGCTCGCCCCTTTGGGACTT+TGG | 0.342784 | 7_4:+55136776 | Msa1163770:five_prime_UTR |
GGACTACCCCTCCACATTCT+AGG | 0.344102 | 7_4:-55141154 | None:intergenic |
ACAATAAACAGAAGTAAATA+TGG | 0.345471 | 7_4:-55140273 | None:intergenic |
AAGGTGTTGGGCATGTTTGC+AGG | 0.345877 | 7_4:+55140432 | Msa1163770:CDS |
GAACCTTGTTATAACCGTTT+TGG | 0.346406 | 7_4:+55137109 | Msa1163770:intron |
TTTGAGTATTCTTCATAGTT+GGG | 0.347898 | 7_4:-55141433 | None:intergenic |
ATTTGAGTATTCTTCATAGT+TGG | 0.350704 | 7_4:-55141434 | None:intergenic |
TAACGTTCTGTTATTCCATA+TGG | 0.351902 | 7_4:-55141367 | None:intergenic |
TACTATATGTTGATTGGAAT+GGG | 0.357764 | 7_4:+55137511 | Msa1163770:CDS |
GATTGTTGAACTTCTAAGTC+TGG | 0.359203 | 7_4:+55137458 | Msa1163770:CDS |
CTTACCAAAGCTATTATTGT+TGG | 0.359747 | 7_4:+55137636 | Msa1163770:CDS |
TATTTGGTCGGAACTTGTTT+TGG | 0.363325 | 7_4:+55139892 | Msa1163770:CDS |
TTAGGTTCAGCTCGCCCCTT+TGG | 0.364104 | 7_4:+55136768 | Msa1163770:intron |
CCTGGAAACCATTGTGAAAT+GGG | 0.364513 | 7_4:-55138050 | None:intergenic |
CAGAAAAGGCTTATGGTAGT+TGG | 0.367074 | 7_4:+55138677 | Msa1163770:CDS |
TCTAGCCCACCAATGGCTTC+GGG | 0.369897 | 7_4:-55141566 | None:intergenic |
TGAATTTGAAACCTTATTCC+AGG | 0.371525 | 7_4:+55140076 | Msa1163770:CDS |
GTTGTTTGGTCATTGAAATC+TGG | 0.373910 | 7_4:-55141634 | None:intergenic |
ATCACCCCTATCTTCTTGAT+TGG | 0.376879 | 7_4:+55141293 | Msa1163770:CDS |
TCTTTGCCACGCCATCTCTT+TGG | 0.378039 | 7_4:-55140032 | None:intergenic |
CAGGCAGAATACCTGGAATA+AGG | 0.378454 | 7_4:-55140087 | None:intergenic |
TTTGCTGTATATAGATTCAT+TGG | 0.378561 | 7_4:+55141987 | Msa1163770:three_prime_UTR |
GGAATTAAGCCCTGTGATCT+TGG | 0.378592 | 7_4:+55137573 | Msa1163770:CDS |
GACATTACAGAAAAGGCTTA+TGG | 0.380010 | 7_4:+55138670 | Msa1163770:CDS |
AACAATGACAGATGACTTAG+AGG | 0.383575 | 7_4:+55141756 | Msa1163770:CDS |
TCACAATGGTTTCCAGGTGC+TGG | 0.383647 | 7_4:+55138056 | Msa1163770:CDS |
TTCAACATTTACAGTGAAAT+CGG | 0.386132 | 7_4:-55140411 | None:intergenic |
GCTATTATTGTTGGATACTT+GGG | 0.389328 | 7_4:+55137645 | Msa1163770:CDS |
TTTAGCAGACCAAGTGGTTC+CGG | 0.389483 | 7_4:+55137186 | Msa1163770:CDS |
TAAAGTCCATTCAAGGGTCT+TGG | 0.389766 | 7_4:-55138129 | None:intergenic |
GAGCATGGAAACTCTCATTA+TGG | 0.390073 | 7_4:+55140610 | Msa1163770:CDS |
ACCTGGAAACCATTGTGAAA+TGG | 0.391785 | 7_4:-55138051 | None:intergenic |
CATGATAATTATATGTTGTT+TGG | 0.395237 | 7_4:-55141648 | None:intergenic |
TACTCAAAAGCTAGCAGTGC+TGG | 0.395445 | 7_4:-55141845 | None:intergenic |
GTAGTACCAATCAAGAAGAT+AGG | 0.404579 | 7_4:-55141299 | None:intergenic |
GATCGGGCTGCATCTCAACT+TGG | 0.409523 | 7_4:+55141469 | Msa1163770:CDS |
CTTCGAGATGATGCTGTGCT+TGG | 0.409901 | 7_4:-55138788 | None:intergenic |
AGAAAAGGCTTATGGTAGTT+GGG | 0.415599 | 7_4:+55138678 | Msa1163770:CDS |
TGAGTATTTGGTTCCCATGA+TGG | 0.416490 | 7_4:-55141049 | None:intergenic |
GGCTCTCACTTCCTGGACTT+GGG | 0.417635 | 7_4:-55137314 | None:intergenic |
GGGATGGATGCTGTTGAATC+TGG | 0.418976 | 7_4:+55137552 | Msa1163770:CDS |
TTCAGAGTAGTTATCCATCA+TGG | 0.419889 | 7_4:+55141035 | Msa1163770:CDS |
ATCGGGCTGCATCTCAACTT+GGG | 0.423241 | 7_4:+55141470 | Msa1163770:CDS |
GAAACAAAACATCCAATAGA+AGG | 0.424244 | 7_4:-55137676 | None:intergenic |
TTACTATATGTTGATTGGAA+TGG | 0.426389 | 7_4:+55137510 | Msa1163770:CDS |
GGGGTCCTTACATCTGAAAA+TGG | 0.427595 | 7_4:-55142078 | None:intergenic |
AGCTTCTTTGCCAAGATCAC+AGG | 0.430987 | 7_4:-55137583 | None:intergenic |
TCCCGAGGGAACAATATCTA+TGG | 0.431420 | 7_4:+55139986 | Msa1163770:CDS |
TTGGTCTTTGGGGAATGGAT+TGG | 0.441248 | 7_4:+55137128 | Msa1163770:five_prime_UTR |
ACCAATTTAAAGTCCATTCA+AGG | 0.443781 | 7_4:-55138136 | None:intergenic |
CAGGGGATGAAGACAGAAAC+AGG | 0.448292 | 7_4:+55141185 | Msa1163770:CDS |
ATTGTTGAACTTCTAAGTCT+GGG | 0.448533 | 7_4:+55137459 | Msa1163770:CDS |
AAGGAGTTCACAGGGAAAGA+TGG | 0.449011 | 7_4:+55140660 | Msa1163770:CDS |
TATGGTTACTACTGTGAGAA+AGG | 0.450099 | 7_4:+55137411 | Msa1163770:CDS |
CACCATAGATATTGTTCCCT+CGG | 0.451923 | 7_4:-55139988 | None:intergenic |
TAAGTGTGAGTGGGGTTAAA+GGG | 0.453021 | 7_4:-55137617 | None:intergenic |
GTATCCAACAATAATAGCTT+TGG | 0.455646 | 7_4:-55137640 | None:intergenic |
AGCCCTTCAGATTTCCTCAA+TGG | 0.457772 | 7_4:+55137333 | Msa1163770:CDS |
AAGAGATCCAAATCAGCAAT+TGG | 0.458966 | 7_4:-55137375 | None:intergenic |
CCTTAGGGAGAGCTTTAGTC+AGG | 0.459193 | 7_4:+55141513 | Msa1163770:CDS |
GCGATTCTTTGCTCAACTAA+AGG | 0.459966 | 7_4:+55137701 | Msa1163770:CDS |
TACTTACCAAGACCCTTGAA+TGG | 0.460856 | 7_4:+55138123 | Msa1163770:CDS |
ACCAATGGCTTCGGGTTGCG+TGG | 0.462694 | 7_4:-55141558 | None:intergenic |
TGAACTTTCGGGCCAGCACC+TGG | 0.463130 | 7_4:-55138068 | None:intergenic |
ATCCAAAGACATTACAGAAA+AGG | 0.464783 | 7_4:+55138663 | Msa1163770:CDS |
AGCAGTGCTGGAATTTATAG+TGG | 0.465268 | 7_4:-55141833 | None:intergenic |
ACAGAAACAGGTTTATATCC+AGG | 0.466653 | 7_4:+55141197 | Msa1163770:CDS |
TTTGCAATGATAGATATGAT+AGG | 0.466727 | 7_4:-55139696 | None:intergenic |
CTCATCAGCTCCCATCCTTA+GGG | 0.467690 | 7_4:+55141498 | Msa1163770:CDS |
TATAGGTCGACCATCTCTTC+AGG | 0.471785 | 7_4:+55139616 | Msa1163770:intron |
TGCTACGAGAGGCATTATAT+GGG | 0.472893 | 7_4:-55140636 | None:intergenic |
TTCGAGATGATGCTGTGCTT+GGG | 0.476956 | 7_4:-55138787 | None:intergenic |
TTTATTATAAAGTTTGCGTT+CGG | 0.478832 | 7_4:-55135848 | None:intergenic |
GAACTATAACTGCTATTAGC+CGG | 0.481240 | 7_4:+55139931 | Msa1163770:CDS |
TCAGTCTCATGACTATATCA+TGG | 0.482419 | 7_4:-55137974 | None:intergenic |
TAGTACCAATCAAGAAGATA+GGG | 0.482945 | 7_4:-55141298 | None:intergenic |
ACTGTAAATGTTGAAGGTGT+TGG | 0.484395 | 7_4:+55140419 | Msa1163770:CDS |
GAGATCGAATTGTCTAATTA+CGG | 0.486113 | 7_4:+55137285 | Msa1163770:CDS |
TCTACGGAGTGGACAAGCTC+AGG | 0.488656 | 7_4:+55141594 | Msa1163770:CDS |
GATGTTCCATTAGAACCATA+TGG | 0.488783 | 7_4:+55141352 | Msa1163770:CDS |
ATGAAATTCAAACTATGCCC+TGG | 0.493235 | 7_4:+55137880 | Msa1163770:CDS |
CTGTAAATGTTGAAGGTGTT+GGG | 0.496375 | 7_4:+55140420 | Msa1163770:CDS |
AAACGATATTGTGCTCCATC+AGG | 0.497164 | 7_4:-55138098 | None:intergenic |
CCAATGGCTTCGGGTTGCGT+GGG | 0.500174 | 7_4:-55141557 | None:intergenic |
ATGATAGATATGATAGGTGT+AGG | 0.502443 | 7_4:-55139690 | None:intergenic |
AGGACCCCAGCAAAATAGTC+TGG | 0.502578 | 7_4:+55142093 | Msa1163770:three_prime_UTR |
AAATGAGTATCACGAGGATC+GGG | 0.504809 | 7_4:+55141453 | Msa1163770:CDS |
TAATTAGACAATTCGATCTC+CGG | 0.512269 | 7_4:-55137282 | None:intergenic |
ATTCCTTGTCATATTCATGC+TGG | 0.512407 | 7_4:+55138724 | Msa1163770:CDS |
CATATACACTTTCTCCATTG+AGG | 0.512728 | 7_4:-55137347 | None:intergenic |
GATTTCACTGTAAATGTTGA+AGG | 0.515835 | 7_4:+55140413 | Msa1163770:CDS |
ATCATGGGAACCAAATACTC+AGG | 0.518116 | 7_4:+55141051 | Msa1163770:CDS |
ACTACTGTGAGAAAGGGTTA+TGG | 0.518635 | 7_4:+55137418 | Msa1163770:CDS |
TATGAACCTCAGCTTGATGT+TGG | 0.519250 | 7_4:+55142028 | Msa1163770:three_prime_UTR |
AGGGGTAGTCCCAATACGGC+AGG | 0.521250 | 7_4:+55141166 | Msa1163770:CDS |
CAAATGAGTATCACGAGGAT+CGG | 0.521885 | 7_4:+55141452 | Msa1163770:CDS |
AATGATGTTACTTGAGGAGA+TGG | 0.523349 | 7_4:+55140233 | Msa1163770:CDS |
TATGGTGTATTGTTACAAAG+TGG | 0.525702 | 7_4:+55137436 | Msa1163770:CDS |
GGAAGGCATCGAATAGTCTC+TGG | 0.526974 | 7_4:-55141392 | None:intergenic |
ACCATAGATATTGTTCCCTC+GGG | 0.527633 | 7_4:-55139987 | None:intergenic |
GTCAACGCCAAAGTCCCAAA+GGG | 0.527737 | 7_4:-55136783 | None:intergenic |
GCACAGCATCATCTCGAAGA+TGG | 0.528098 | 7_4:+55138792 | Msa1163770:CDS |
ATGGTTACTACTGTGAGAAA+GGG | 0.529048 | 7_4:+55137412 | Msa1163770:CDS |
TAGCTTTGGTAAGTGTGAGT+GGG | 0.530753 | 7_4:-55137626 | None:intergenic |
GAAGATGGTCAAACTTGTCT+AGG | 0.533585 | 7_4:+55138807 | Msa1163770:CDS |
AGCATGAATATGACAAGGAA+TGG | 0.534278 | 7_4:-55138722 | None:intergenic |
TCATTCTGTGTCAAGTTGGA+AGG | 0.535353 | 7_4:-55141409 | None:intergenic |
TGTTCACAGACACTAATAGT+AGG | 0.535903 | 7_4:-55137160 | None:intergenic |
ACTTCTGTTTATTGTCCCAA+AGG | 0.536240 | 7_4:+55140281 | Msa1163770:CDS |
CCTAAGGATGGGAGCTGATG+AGG | 0.537502 | 7_4:-55141497 | None:intergenic |
TCAGAGTAGTTATCCATCAT+GGG | 0.539771 | 7_4:+55141036 | Msa1163770:CDS |
CTATTATTGTTGGATACTTG+GGG | 0.540123 | 7_4:+55137646 | Msa1163770:CDS |
TCCATGCTCTTGAAAATCAA+AGG | 0.540684 | 7_4:-55140596 | None:intergenic |
AACTATAACTGCTATTAGCC+GGG | 0.542388 | 7_4:+55139932 | Msa1163770:CDS |
ACTAAAGCTCTCCCTAAGGA+TGG | 0.543023 | 7_4:-55141509 | None:intergenic |
ATAGGGGTGATTATTCTGGT+TGG | 0.544484 | 7_4:-55141281 | None:intergenic |
AAAGTTCAATCTAGTCCTGA+TGG | 0.544493 | 7_4:+55138083 | Msa1163770:CDS |
TAATCCGATGCCTGAAGAGA+TGG | 0.549224 | 7_4:-55139626 | None:intergenic |
CTCGAGGAGTCTCTGCTAGA+GGG | 0.550555 | 7_4:+55139774 | Msa1163770:CDS |
TTGTTCTCGTTCAAAATACT+CGG | 0.551966 | 7_4:+55137922 | Msa1163770:CDS |
TCTCGAGGAGTCTCTGCTAG+AGG | 0.552554 | 7_4:+55139773 | Msa1163770:CDS |
CTAAAAGCACCGGAACCACT+TGG | 0.553267 | 7_4:-55137195 | None:intergenic |
GTTCGGAAGGAGATGAGCAT+AGG | 0.553415 | 7_4:-55135831 | None:intergenic |
GCTTCTTTGCCAAGATCACA+GGG | 0.553864 | 7_4:-55137582 | None:intergenic |
ACGCAACCCGAAGCCATTGG+TGG | 0.555348 | 7_4:+55141560 | Msa1163770:CDS |
GTGGAGGGGTAGTCCCAATA+CGG | 0.557059 | 7_4:+55141162 | Msa1163770:CDS |
GGGTAGTCCCAATACGGCAG+GGG | 0.557263 | 7_4:+55141168 | Msa1163770:CDS |
TTATAAAGTTTGCGTTCGGA+AGG | 0.557342 | 7_4:-55135844 | None:intergenic |
ATGACAGATGACTTAGAGGC+AGG | 0.558731 | 7_4:+55141760 | Msa1163770:CDS |
TGCTGGCATATCTCTTTCTG+AGG | 0.559787 | 7_4:+55138741 | Msa1163770:CDS |
TCGTAGCAGAAGGAGTTCAC+AGG | 0.560103 | 7_4:+55140651 | Msa1163770:CDS |
TTAGTTGAGCAAAGAATCGC+AGG | 0.562238 | 7_4:-55137698 | None:intergenic |
TCGACCATCTCTTCAGGCAT+CGG | 0.562994 | 7_4:+55139622 | Msa1163770:CDS |
GGCGCGTCATCTTTGACTAG+AGG | 0.563241 | 7_4:+55137240 | Msa1163770:CDS |
GGGCTCCGTAATGCAAAATG+TGG | 0.563493 | 7_4:+55137531 | Msa1163770:CDS |
TTGTTGAACTTCTAAGTCTG+GGG | 0.566155 | 7_4:+55137460 | Msa1163770:CDS |
AGTGCTGTATGGCATTTCCC+TGG | 0.566226 | 7_4:-55141215 | None:intergenic |
TACGGAAGGATCCCAAGTCC+AGG | 0.566589 | 7_4:+55137303 | Msa1163770:CDS |
CTTAATTGGAATGCTCAACA+AGG | 0.567745 | 7_4:+55138013 | Msa1163770:CDS |
TATCATTGCAGATATTTGGT+CGG | 0.568586 | 7_4:+55139880 | Msa1163770:intron |
CAGAAACAGGTTTATATCCA+GGG | 0.569124 | 7_4:+55141198 | Msa1163770:CDS |
TTCCCCTCCTAGAATGTGGA+GGG | 0.569698 | 7_4:+55141147 | Msa1163770:CDS |
TTTCCAAATAACAATTAGAG+AGG | 0.570237 | 7_4:-55141956 | None:intergenic |
ACCGATCAAACATGCTATGT+AGG | 0.571866 | 7_4:-55138163 | None:intergenic |
CAGAATTGCAGCAAAGCCAC+CGG | 0.573817 | 7_4:-55139736 | None:intergenic |
TTTGAATATACTAAAAGCAC+CGG | 0.574468 | 7_4:-55137205 | None:intergenic |
TTTACTTCATGATGATTCGC+CGG | 0.574817 | 7_4:+55137263 | Msa1163770:CDS |
TCCTACATAGCATGTTTGAT+CGG | 0.578136 | 7_4:+55138162 | Msa1163770:CDS |
CTCCATTGAGGAAATCTGAA+GGG | 0.578699 | 7_4:-55137335 | None:intergenic |
TCTCCATTGAGGAAATCTGA+AGG | 0.580109 | 7_4:-55137336 | None:intergenic |
AGCTTTGGTAAGTGTGAGTG+GGG | 0.580159 | 7_4:-55137625 | None:intergenic |
TTGCTTTCCCCATTTCACAA+TGG | 0.581632 | 7_4:+55138042 | Msa1163770:CDS |
GGGGTAGTCCCAATACGGCA+GGG | 0.581900 | 7_4:+55141167 | Msa1163770:CDS |
CCATTCCCCAAAGACCAAAA+CGG | 0.583103 | 7_4:-55137123 | None:intergenic |
CGCAACCCGAAGCCATTGGT+GGG | 0.583279 | 7_4:+55141561 | Msa1163770:CDS |
CCAGTTGCAAAAGTGCTGTA+TGG | 0.583969 | 7_4:-55141226 | None:intergenic |
AGATGATGAAACAGTAGCGA+AGG | 0.584404 | 7_4:-55136008 | None:intergenic |
GTTTGGTCATTGAAATCTGG+AGG | 0.584448 | 7_4:-55141631 | None:intergenic |
CACATTATATGCCAAAGAGA+TGG | 0.585314 | 7_4:+55140021 | Msa1163770:CDS |
GAGCGGAAGTTATCAGTACA+TGG | 0.585425 | 7_4:+55141109 | Msa1163770:CDS |
TTCCAAATAACAATTAGAGA+GGG | 0.588455 | 7_4:-55141955 | None:intergenic |
GATGAAACAGTAGCGAAGGA+AGG | 0.589559 | 7_4:-55136004 | None:intergenic |
TCCTTACATCTGAAAATGGA+AGG | 0.591128 | 7_4:-55142074 | None:intergenic |
TCGGAAACTATGTGTGCTGA+AGG | 0.593556 | 7_4:+55137941 | Msa1163770:CDS |
CTAAAGCTCTCCCTAAGGAT+GGG | 0.595120 | 7_4:-55141508 | None:intergenic |
GGGTTCATTCTGTGTCAAGT+TGG | 0.595429 | 7_4:-55141413 | None:intergenic |
CCTGACTAAAGCTCTCCCTA+AGG | 0.596692 | 7_4:-55141513 | None:intergenic |
TGAAATTCAAACTATGCCCT+GGG | 0.597379 | 7_4:+55137881 | Msa1163770:CDS |
TCGGGCTGCATCTCAACTTG+GGG | 0.597814 | 7_4:+55141471 | Msa1163770:CDS |
CAGTCTCATGACTATATCAT+GGG | 0.597885 | 7_4:-55137973 | None:intergenic |
GACGACTTCTAGCCCACCAA+TGG | 0.598590 | 7_4:-55141573 | None:intergenic |
GGTGGGCTAGAAGTCGTCTA+CGG | 0.600262 | 7_4:+55141578 | Msa1163770:CDS |
ATAGCTTTGGTAAGTGTGAG+TGG | 0.602946 | 7_4:-55137627 | None:intergenic |
CCAATTTAAAGTCCATTCAA+GGG | 0.603846 | 7_4:-55138135 | None:intergenic |
CCGTAATGCAAAATGTGGGA+TGG | 0.604122 | 7_4:+55137536 | Msa1163770:CDS |
ACCCCTCCACATTCTAGGAG+GGG | 0.604562 | 7_4:-55141149 | None:intergenic |
GCTCATCTGCAATTGCAGCC+CGG | 0.605056 | 7_4:-55139950 | None:intergenic |
TGTCAACGCCAAAGTCCCAA+AGG | 0.605903 | 7_4:-55136784 | None:intergenic |
TTTATAGTGGGAGTTTCTGG+AGG | 0.606997 | 7_4:-55141820 | None:intergenic |
CTTCCCCTCCTAGAATGTGG+AGG | 0.608862 | 7_4:+55141146 | Msa1163770:CDS |
TCATGGGAACCAAATACTCA+GGG | 0.611108 | 7_4:+55141052 | Msa1163770:CDS |
TAAGTTCCAACATCAAGCTG+AGG | 0.612971 | 7_4:-55142034 | None:intergenic |
CATCTTCCCCTCCTAGAATG+TGG | 0.614729 | 7_4:+55141143 | Msa1163770:CDS |
TACCCCTCCACATTCTAGGA+GGG | 0.614814 | 7_4:-55141150 | None:intergenic |
AGAGAGGGACAATCATGACT+TGG | 0.617793 | 7_4:-55141940 | None:intergenic |
ACAGAAGTAAATATGGAGTG+AGG | 0.618250 | 7_4:-55140266 | None:intergenic |
AGATGGAGAAATCATTGTTG+AGG | 0.619203 | 7_4:+55140677 | Msa1163770:CDS |
TACAGCAATGATGTTACTTG+AGG | 0.621146 | 7_4:+55140227 | Msa1163770:CDS |
TCTCTTGAAGCTGCATCATG+AGG | 0.621641 | 7_4:-55141331 | None:intergenic |
GCAATCACTTGGATTCGTTG+TGG | 0.621682 | 7_4:+55141248 | Msa1163770:CDS |
ATATTCAAATGGAAACAGAA+AGG | 0.623281 | 7_4:+55137219 | Msa1163770:CDS |
CGTAGCAGAAGGAGTTCACA+GGG | 0.625758 | 7_4:+55140652 | Msa1163770:CDS |
ATCTTAGAACATTCAGAGAG+CGG | 0.626044 | 7_4:+55141092 | Msa1163770:CDS |
CGAGGGAACAATATCTATGG+TGG | 0.626273 | 7_4:+55139989 | Msa1163770:CDS |
TCGAATTGTCTAATTACGGA+AGG | 0.628393 | 7_4:+55137289 | Msa1163770:CDS |
TATATAGATTCATTGGTGTG+AGG | 0.629591 | 7_4:+55141994 | Msa1163770:three_prime_UTR |
CTACCCCTCCACATTCTAGG+AGG | 0.629863 | 7_4:-55141151 | None:intergenic |
ATAATGCCTCTCGTAGCAGA+AGG | 0.629914 | 7_4:+55140641 | Msa1163770:CDS |
GCAGTGCTGGAATTTATAGT+GGG | 0.639720 | 7_4:-55141832 | None:intergenic |
GCTTCTGGTCTTAGATCCCG+AGG | 0.643614 | 7_4:+55139971 | Msa1163770:CDS |
AGTCATGAGACTGATGCGGA+AGG | 0.646846 | 7_4:+55137983 | Msa1163770:CDS |
GATGGTCAAACTTGTCTAGG+TGG | 0.647207 | 7_4:+55138810 | Msa1163770:CDS |
CTGGAAACCATTGTGAAATG+GGG | 0.649696 | 7_4:-55138049 | None:intergenic |
TCCCCTCCTAGAATGTGGAG+GGG | 0.656107 | 7_4:+55141148 | Msa1163770:CDS |
GCTAGAAGTCGTCTACGGAG+TGG | 0.667710 | 7_4:+55141583 | Msa1163770:CDS |
AGACCAAAACGGTTATAACA+AGG | 0.668823 | 7_4:-55137112 | None:intergenic |
TATATGCCAAAGAGATGGCG+TGG | 0.670967 | 7_4:+55140026 | Msa1163770:CDS |
TTAATTGGAATGCTCAACAA+GGG | 0.673370 | 7_4:+55138014 | Msa1163770:CDS |
ACAATGTTTAGCAGACCAAG+TGG | 0.673800 | 7_4:+55137180 | Msa1163770:exon |
TGGCAAAGAAATTACTGACG+TGG | 0.676549 | 7_4:+55140046 | Msa1163770:CDS |
ATATAGTCATGAGACTGATG+CGG | 0.679190 | 7_4:+55137979 | Msa1163770:CDS |
GGCTCCGTAATGCAAAATGT+GGG | 0.679327 | 7_4:+55137532 | Msa1163770:CDS |
AGTACCAATCAAGAAGATAG+GGG | 0.679475 | 7_4:-55141297 | None:intergenic |
CTTCTGGTCTTAGATCCCGA+GGG | 0.679702 | 7_4:+55139972 | Msa1163770:CDS |
TGAACTCCTTCTGCTACGAG+AGG | 0.680258 | 7_4:-55140647 | None:intergenic |
GCTACGAGAGGCATTATATG+GGG | 0.685648 | 7_4:-55140635 | None:intergenic |
ATGCCAGCATGAATATGACA+AGG | 0.687544 | 7_4:-55138727 | None:intergenic |
TCAACGCCAAAGTCCCAAAG+GGG | 0.699074 | 7_4:-55136782 | None:intergenic |
ATAAGGTTTCAAATTCAATG+CGG | 0.726994 | 7_4:-55140070 | None:intergenic |
ATACTCAAATGAGTATCACG+AGG | 0.745566 | 7_4:+55141447 | Msa1163770:CDS |
CATGGGAACCAAATACTCAG+GGG | 0.758921 | 7_4:+55141053 | Msa1163770:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTTTATTGGAAAATTTA+TGG | + | chr7_4:55139171-55139190 | Msa1163770:intron | 10.0% |
!!! | TGATAATTTTTTTTTAGTAT+AGG | + | chr7_4:55139214-55139233 | Msa1163770:intron | 10.0% |
!! | TGTAAATAAATAACAAATAA+CGG | - | chr7_4:55140151-55140170 | None:intergenic | 10.0% |
!! | TAAAATTCAAAACATATATA+TGG | - | chr7_4:55140773-55140792 | None:intergenic | 10.0% |
!!! | TTTTTTATACTTTTGTGAAA+TGG | + | chr7_4:55136717-55136736 | Msa1163770:intron | 15.0% |
!!! | TTATTTTTCTGTTGTTTATT+TGG | + | chr7_4:55136983-55137002 | Msa1163770:intron | 15.0% |
!!! | TATTTTTCTGTTGTTTATTT+GGG | + | chr7_4:55136984-55137003 | Msa1163770:intron | 15.0% |
!! | GTAAGATTCTAATATTAATT+TGG | + | chr7_4:55137075-55137094 | Msa1163770:intron | 15.0% |
!!! | TTTTTTTACTATATGTTGAT+TGG | + | chr7_4:55137505-55137524 | Msa1163770:CDS | 15.0% |
!! | ACACATTATTAAATATTAAC+AGG | - | chr7_4:55138249-55138268 | None:intergenic | 15.0% |
!!! | CTATTCATGAAAATTTTTAT+TGG | + | chr7_4:55139160-55139179 | Msa1163770:intron | 15.0% |
!! | ATTTATGGAAATTACAATAA+AGG | + | chr7_4:55139186-55139205 | Msa1163770:intron | 15.0% |
!! | TATTTATTTACACATAGAAT+AGG | + | chr7_4:55140159-55140178 | Msa1163770:intron | 15.0% |
!! | CAAAATATTCATAATAGTAA+TGG | - | chr7_4:55140805-55140824 | None:intergenic | 15.0% |
!!! | TCCAAAAAAAATTATTTTAC+TGG | - | chr7_4:55140960-55140979 | None:intergenic | 15.0% |
!! | AATTAAACGAAAATACATAT+AGG | - | chr7_4:55140992-55141011 | None:intergenic | 15.0% |
!! | TTTATTATAAAGTTTGCGTT+CGG | - | chr7_4:55135851-55135870 | None:intergenic | 20.0% |
!! | TCATTGATATTCATATGATA+TGG | - | chr7_4:55136083-55136102 | None:intergenic | 20.0% |
!! | CATATGAATATCAATGATTT+CGG | + | chr7_4:55136086-55136105 | Msa1163770:intron | 20.0% |
!!! | TAACTGAATTTGTTCTTTTT+TGG | + | chr7_4:55136388-55136407 | Msa1163770:intron | 20.0% |
!! | TATACAAATACAATGATCTT+TGG | + | chr7_4:55136445-55136464 | Msa1163770:intron | 20.0% |
!!! | TTGATTATTTTTGAACACTT+AGG | + | chr7_4:55136664-55136683 | Msa1163770:intron | 20.0% |
!! | ATTTCACAAAATGGTTAAAA+GGG | - | chr7_4:55138310-55138329 | None:intergenic | 20.0% |
!!! | TTTTAACCATTTTGTGAAAT+CGG | + | chr7_4:55138310-55138329 | Msa1163770:intron | 20.0% |
!! | ATAAATTGCATCCTTATATA+AGG | - | chr7_4:55138386-55138405 | None:intergenic | 20.0% |
!! | TTTCAAATTTCATGTTATTC+TGG | + | chr7_4:55138427-55138446 | Msa1163770:intron | 20.0% |
!! | AATTTCATAGTTAGTTGTAT+AGG | + | chr7_4:55138459-55138478 | Msa1163770:intron | 20.0% |
!!! | GTTTATTTTCAGTACATAAT+TGG | + | chr7_4:55139002-55139021 | Msa1163770:intron | 20.0% |
!!! | TTATCAATAACTTGTGTTAT+AGG | + | chr7_4:55139599-55139618 | Msa1163770:intron | 20.0% |
!!! | AAATTCATATCTTTTGTATC+CGG | + | chr7_4:55139717-55139736 | Msa1163770:CDS | 20.0% |
!! | AAAATATCATTGCAGATATT+TGG | + | chr7_4:55139876-55139895 | Msa1163770:intron | 20.0% |
!! | ACAATAAACAGAAGTAAATA+TGG | - | chr7_4:55140276-55140295 | None:intergenic | 20.0% |
!! | TACTTGGAGATTTATTTATA+TGG | + | chr7_4:55140313-55140332 | Msa1163770:intron | 20.0% |
!!! | GCCAGTAAAATAATTTTTTT+TGG | + | chr7_4:55140956-55140975 | Msa1163770:intron | 20.0% |
!! | CATGATAATTATATGTTGTT+TGG | - | chr7_4:55141651-55141670 | None:intergenic | 20.0% |
!! | AAACTCTTTTCTTTACTTCA+AGG | + | chr7_4:55136033-55136052 | Msa1163770:five_prime_UTR | 25.0% |
! | CATATGATATGGAAAAGAAA+GGG | - | chr7_4:55136072-55136091 | None:intergenic | 25.0% |
! | TCATATGATATGGAAAAGAA+AGG | - | chr7_4:55136073-55136092 | None:intergenic | 25.0% |
! | CAACTATCTTAACTATTCAT+TGG | - | chr7_4:55136538-55136557 | None:intergenic | 25.0% |
! | AGTTAAGATAGTTGAAAATG+CGG | + | chr7_4:55136544-55136563 | Msa1163770:intron | 25.0% |
!! | ACATTTGAAGATGATGTTTT+AGG | + | chr7_4:55136750-55136769 | Msa1163770:intron | 25.0% |
!! | TTTGAATATACTAAAAGCAC+CGG | - | chr7_4:55137208-55137227 | None:intergenic | 25.0% |
!! | GTGCTTTTAGTATATTCAAA+TGG | + | chr7_4:55137208-55137227 | Msa1163770:CDS | 25.0% |
! | ATATTCAAATGGAAACAGAA+AGG | + | chr7_4:55137219-55137238 | Msa1163770:CDS | 25.0% |
!! | AAAAAATCCTGAAAAGCATA+TGG | - | chr7_4:55137490-55137509 | None:intergenic | 25.0% |
!! | TTACTATATGTTGATTGGAA+TGG | + | chr7_4:55137510-55137529 | Msa1163770:CDS | 25.0% |
!! | TACTATATGTTGATTGGAAT+GGG | + | chr7_4:55137511-55137530 | Msa1163770:CDS | 25.0% |
! | TAAACAACTAAAATGCATTG+AGG | + | chr7_4:55137780-55137799 | Msa1163770:intron | 25.0% |
!! | AACAACTTTGTCAACAATTT+TGG | - | chr7_4:55137907-55137926 | None:intergenic | 25.0% |
!! | GTATGAATTATTGTCTTTTG+AGG | + | chr7_4:55138267-55138286 | Msa1163770:intron | 25.0% |
! | AAATGGTTAAAAGGGAAAAT+TGG | - | chr7_4:55138302-55138321 | None:intergenic | 25.0% |
! | GATTTCACAAAATGGTTAAA+AGG | - | chr7_4:55138311-55138330 | None:intergenic | 25.0% |
! | ATAAGGATGCAATTTATATC+TGG | + | chr7_4:55138389-55138408 | Msa1163770:intron | 25.0% |
!! | AGGTATCATATTCATTTTCT+TGG | + | chr7_4:55138852-55138871 | Msa1163770:intron | 25.0% |
! | GAAGAGAAAATGAAAGAAAA+TGG | - | chr7_4:55138882-55138901 | None:intergenic | 25.0% |
! | AACTGAATAAAATATGCACT+TGG | - | chr7_4:55138985-55139004 | None:intergenic | 25.0% |
! | AACTTCAAATCTTTCTTTCA+TGG | - | chr7_4:55139132-55139151 | None:intergenic | 25.0% |
!!! | CTTGCATATTTTTTTGAAAC+AGG | + | chr7_4:55139334-55139353 | Msa1163770:intron | 25.0% |
! | TGTAACATAGTTATTTGACT+TGG | + | chr7_4:55139392-55139411 | Msa1163770:intron | 25.0% |
!! | TAATTCTAAAAACGATAACC+AGG | - | chr7_4:55139544-55139563 | None:intergenic | 25.0% |
! | TTTGCAATGATAGATATGAT+AGG | - | chr7_4:55139699-55139718 | None:intergenic | 25.0% |
! | ATAAGGTTTCAAATTCAATG+CGG | - | chr7_4:55140073-55140092 | None:intergenic | 25.0% |
!! | CATAATGTGAATGTATTGAT+CGG | - | chr7_4:55140119-55140138 | None:intergenic | 25.0% |
! | TTCAACATTTACAGTGAAAT+CGG | - | chr7_4:55140414-55140433 | None:intergenic | 25.0% |
! | CTCATAAGACAAAATTCATT+AGG | + | chr7_4:55140724-55140743 | Msa1163770:intron | 25.0% |
! | TAAGACAAAATTCATTAGGA+AGG | + | chr7_4:55140728-55140747 | Msa1163770:intron | 25.0% |
!!! | GTGCATGCTTTTTAATTTTT+TGG | + | chr7_4:55140837-55140856 | Msa1163770:intron | 25.0% |
! | TTTGAGTATTCTTCATAGTT+GGG | - | chr7_4:55141436-55141455 | None:intergenic | 25.0% |
! | ATTTGAGTATTCTTCATAGT+TGG | - | chr7_4:55141437-55141456 | None:intergenic | 25.0% |
!! | GGAGAATTTAATCTACATTT+TGG | + | chr7_4:55141781-55141800 | Msa1163770:CDS | 25.0% |
! | TTCCAAATAACAATTAGAGA+GGG | - | chr7_4:55141958-55141977 | None:intergenic | 25.0% |
! | TTTCCAAATAACAATTAGAG+AGG | - | chr7_4:55141959-55141978 | None:intergenic | 25.0% |
!! | TTTGCTGTATATAGATTCAT+TGG | + | chr7_4:55141987-55142006 | Msa1163770:three_prime_UTR | 25.0% |
!! | GATTTTTGTTTATAGTTGCG+TGG | - | chr7_4:55135942-55135961 | None:intergenic | 30.0% |
! | GTTTGCATATTTTGTAACGT+TGG | + | chr7_4:55136243-55136262 | Msa1163770:intron | 30.0% |
!!! | CTTTTTTGGTCTGACATTTA+TGG | + | chr7_4:55136402-55136421 | Msa1163770:intron | 30.0% |
TGGAGCAATTATCATAACAT+GGG | - | chr7_4:55136596-55136615 | None:intergenic | 30.0% | |
ATGGAGCAATTATCATAACA+TGG | - | chr7_4:55136597-55136616 | None:intergenic | 30.0% | |
TGTTATGATAATTGCTCCAT+TGG | + | chr7_4:55136597-55136616 | Msa1163770:intron | 30.0% | |
GTTATGATAATTGCTCCATT+GGG | + | chr7_4:55136598-55136617 | Msa1163770:intron | 30.0% | |
ACAAATACACATTGCCAATT+TGG | - | chr7_4:55136629-55136648 | None:intergenic | 30.0% | |
AAAGTTTGAGAGAGAAAGTT+AGG | - | chr7_4:55136694-55136713 | None:intergenic | 30.0% | |
TCATTAACTGGTAGAAATCT+TGG | + | chr7_4:55136845-55136864 | Msa1163770:intron | 30.0% | |
GAAAAATAAAAGCGAAGACA+AGG | - | chr7_4:55136972-55136991 | None:intergenic | 30.0% | |
TTGCAAATTGCATTCCTATT+TGG | - | chr7_4:55137013-55137032 | None:intergenic | 30.0% | |
!! | TTATAACCGTTTTGGTCTTT+GGG | + | chr7_4:55137117-55137136 | Msa1163770:five_prime_UTR | 30.0% |
TAATTAGACAATTCGATCTC+CGG | - | chr7_4:55137285-55137304 | None:intergenic | 30.0% | |
GAGATCGAATTGTCTAATTA+CGG | + | chr7_4:55137285-55137304 | Msa1163770:CDS | 30.0% | |
! | CTCTTCTTTGAAAGACTTTA+TGG | + | chr7_4:55137393-55137412 | Msa1163770:CDS | 30.0% |
TATGGTGTATTGTTACAAAG+TGG | + | chr7_4:55137436-55137455 | Msa1163770:CDS | 30.0% | |
ATTGTTGAACTTCTAAGTCT+GGG | + | chr7_4:55137459-55137478 | Msa1163770:CDS | 30.0% | |
CTTACCAAAGCTATTATTGT+TGG | + | chr7_4:55137636-55137655 | Msa1163770:CDS | 30.0% | |
GTATCCAACAATAATAGCTT+TGG | - | chr7_4:55137643-55137662 | None:intergenic | 30.0% | |
AGCTATTATTGTTGGATACT+TGG | + | chr7_4:55137644-55137663 | Msa1163770:CDS | 30.0% | |
GCTATTATTGTTGGATACTT+GGG | + | chr7_4:55137645-55137664 | Msa1163770:CDS | 30.0% | |
CTATTATTGTTGGATACTTG+GGG | + | chr7_4:55137646-55137665 | Msa1163770:CDS | 30.0% | |
GAAACAAAACATCCAATAGA+AGG | - | chr7_4:55137679-55137698 | None:intergenic | 30.0% | |
TTGTTCTCGTTCAAAATACT+CGG | + | chr7_4:55137922-55137941 | Msa1163770:CDS | 30.0% | |
TTAATTGGAATGCTCAACAA+GGG | + | chr7_4:55138014-55138033 | Msa1163770:CDS | 30.0% | |
! | CCAATTTAAAGTCCATTCAA+GGG | - | chr7_4:55138138-55138157 | None:intergenic | 30.0% |
! | ACCAATTTAAAGTCCATTCA+AGG | - | chr7_4:55138139-55138158 | None:intergenic | 30.0% |
! | AACAAACCGATTTCACAAAA+TGG | - | chr7_4:55138319-55138338 | None:intergenic | 30.0% |
TTGTTTGTTTGAAGGATAGA+AGG | + | chr7_4:55138338-55138357 | Msa1163770:intron | 30.0% | |
ATAGTTAGTTGTATAGGAGT+TGG | + | chr7_4:55138465-55138484 | Msa1163770:intron | 30.0% | |
GATTGACATATGTTGTGATT+TGG | + | chr7_4:55138528-55138547 | Msa1163770:intron | 30.0% | |
ATCCAAAGACATTACAGAAA+AGG | + | chr7_4:55138663-55138682 | Msa1163770:CDS | 30.0% | |
!! | GATTTTTAGGGAATACAATG+AGG | + | chr7_4:55138832-55138851 | Msa1163770:CDS | 30.0% |
!! | ACATAGTATAGAAGTGTCTA+TGG | - | chr7_4:55138956-55138975 | None:intergenic | 30.0% |
AGTTATCCAAAAACCTTTGA+TGG | + | chr7_4:55139040-55139059 | Msa1163770:intron | 30.0% | |
TTATATACACAACCACTGAT+GGG | - | chr7_4:55139069-55139088 | None:intergenic | 30.0% | |
ATTATATACACAACCACTGA+TGG | - | chr7_4:55139070-55139089 | None:intergenic | 30.0% | |
CATGCATTCTCTGTTAATAT+CGG | + | chr7_4:55139095-55139114 | Msa1163770:intron | 30.0% | |
ATTTATGAGTGACCACATTA+TGG | + | chr7_4:55139277-55139296 | Msa1163770:intron | 30.0% | |
ACTAGAATAACACCATAATG+TGG | - | chr7_4:55139292-55139311 | None:intergenic | 30.0% | |
CTTTCAAACAACATAAATGC+TGG | - | chr7_4:55139418-55139437 | None:intergenic | 30.0% | |
! | GCTATTGTTTGGTAGTATAA+AGG | - | chr7_4:55139444-55139463 | None:intergenic | 30.0% |
CACAAGTTATTGATAAGCTT+TGG | - | chr7_4:55139595-55139614 | None:intergenic | 30.0% | |
ATGATAGATATGATAGGTGT+AGG | - | chr7_4:55139693-55139712 | None:intergenic | 30.0% | |
ATCAACAGAAGTTCATTACA+TGG | - | chr7_4:55139800-55139819 | None:intergenic | 30.0% | |
TATCATTGCAGATATTTGGT+CGG | + | chr7_4:55139880-55139899 | Msa1163770:intron | 30.0% | |
! | TGAATTTGAAACCTTATTCC+AGG | + | chr7_4:55140076-55140095 | Msa1163770:CDS | 30.0% |
! | TGCTCATGTTTTTCTTTGTA+TGG | + | chr7_4:55140197-55140216 | Msa1163770:intron | 30.0% |
GATTTCACTGTAAATGTTGA+AGG | + | chr7_4:55140413-55140432 | Msa1163770:CDS | 30.0% | |
! | ATATTTTCTGCCATAAGCTA+TGG | - | chr7_4:55140540-55140559 | None:intergenic | 30.0% |
ACAATGTTTATACTCTCAGT+TGG | + | chr7_4:55140876-55140895 | Msa1163770:intron | 30.0% | |
TAGTACCAATCAAGAAGATA+GGG | - | chr7_4:55141301-55141320 | None:intergenic | 30.0% | |
!! | GTTATTCCATATGGTTCTAA+TGG | - | chr7_4:55141361-55141380 | None:intergenic | 30.0% |
TAACGTTCTGTTATTCCATA+TGG | - | chr7_4:55141370-55141389 | None:intergenic | 30.0% | |
! | ATGACAAGTTTTCTGATAGA+GGG | + | chr7_4:55141668-55141687 | Msa1163770:CDS | 30.0% |
AAACAAAAAATGTGGGAAAG+GGG | - | chr7_4:55141883-55141902 | None:intergenic | 30.0% | |
CAAACAAAAAATGTGGGAAA+GGG | - | chr7_4:55141884-55141903 | None:intergenic | 30.0% | |
TATATAGATTCATTGGTGTG+AGG | + | chr7_4:55141994-55142013 | Msa1163770:three_prime_UTR | 30.0% | |
TTATAAAGTTTGCGTTCGGA+AGG | - | chr7_4:55135847-55135866 | None:intergenic | 35.0% | |
! | TTTGCACAGAAATTTTGCCT+CGG | - | chr7_4:55136487-55136506 | None:intergenic | 35.0% |
! | ACAACTTTTCTCTCATGATC+AGG | + | chr7_4:55136814-55136833 | Msa1163770:five_prime_UTR | 35.0% |
! | TTTTCTCTCATGATCAGGTA+TGG | + | chr7_4:55136819-55136838 | Msa1163770:intron | 35.0% |
! | CAGGTATGGTTTTCATTAAC+TGG | + | chr7_4:55136833-55136852 | Msa1163770:intron | 35.0% |
!! | GTTTATTTGGGTTGCCAAAT+AGG | + | chr7_4:55136996-55137015 | Msa1163770:intron | 35.0% |
!! | GAACCTTGTTATAACCGTTT+TGG | + | chr7_4:55137109-55137128 | Msa1163770:intron | 35.0% |
AGACCAAAACGGTTATAACA+AGG | - | chr7_4:55137115-55137134 | None:intergenic | 35.0% | |
!! | GTTATAACCGTTTTGGTCTT+TGG | + | chr7_4:55137116-55137135 | Msa1163770:five_prime_UTR | 35.0% |
!! | TATAACCGTTTTGGTCTTTG+GGG | + | chr7_4:55137118-55137137 | Msa1163770:five_prime_UTR | 35.0% |
TGTTCACAGACACTAATAGT+AGG | - | chr7_4:55137163-55137182 | None:intergenic | 35.0% | |
TTTACTTCATGATGATTCGC+CGG | + | chr7_4:55137263-55137282 | Msa1163770:CDS | 35.0% | |
TCGAATTGTCTAATTACGGA+AGG | + | chr7_4:55137289-55137308 | Msa1163770:CDS | 35.0% | |
CATATACACTTTCTCCATTG+AGG | - | chr7_4:55137350-55137369 | None:intergenic | 35.0% | |
! | TGTAGAACCAATTGCTGATT+TGG | + | chr7_4:55137368-55137387 | Msa1163770:CDS | 35.0% |
AAGAGATCCAAATCAGCAAT+TGG | - | chr7_4:55137378-55137397 | None:intergenic | 35.0% | |
TATGGTTACTACTGTGAGAA+AGG | + | chr7_4:55137411-55137430 | Msa1163770:CDS | 35.0% | |
ATGGTTACTACTGTGAGAAA+GGG | + | chr7_4:55137412-55137431 | Msa1163770:CDS | 35.0% | |
GATTGTTGAACTTCTAAGTC+TGG | + | chr7_4:55137458-55137477 | Msa1163770:CDS | 35.0% | |
TTGTTGAACTTCTAAGTCTG+GGG | + | chr7_4:55137460-55137479 | Msa1163770:CDS | 35.0% | |
!!! | TGGGGATTTTTTCCTTCTAT+TGG | + | chr7_4:55137664-55137683 | Msa1163770:CDS | 35.0% |
AGACAAAAACATGTGAACTG+TGG | - | chr7_4:55137821-55137840 | None:intergenic | 35.0% | |
ATGAAATTCAAACTATGCCC+TGG | + | chr7_4:55137880-55137899 | Msa1163770:CDS | 35.0% | |
TGAAATTCAAACTATGCCCT+GGG | + | chr7_4:55137881-55137900 | Msa1163770:CDS | 35.0% | |
CAGTCTCATGACTATATCAT+GGG | - | chr7_4:55137976-55137995 | None:intergenic | 35.0% | |
TCAGTCTCATGACTATATCA+TGG | - | chr7_4:55137977-55137996 | None:intergenic | 35.0% | |
ATATAGTCATGAGACTGATG+CGG | + | chr7_4:55137979-55137998 | Msa1163770:CDS | 35.0% | |
CTTAATTGGAATGCTCAACA+AGG | + | chr7_4:55138013-55138032 | Msa1163770:CDS | 35.0% | |
TCAGGACTAGATTGAACTTT+CGG | - | chr7_4:55138083-55138102 | None:intergenic | 35.0% | |
AAAGTTCAATCTAGTCCTGA+TGG | + | chr7_4:55138083-55138102 | Msa1163770:CDS | 35.0% | |
! | CCCTTGAATGGACTTTAAAT+TGG | + | chr7_4:55138135-55138154 | Msa1163770:CDS | 35.0% |
TCCTACATAGCATGTTTGAT+CGG | + | chr7_4:55138162-55138181 | Msa1163770:CDS | 35.0% | |
CACTCTGATTGTACAACTAA+AGG | - | chr7_4:55138210-55138229 | None:intergenic | 35.0% | |
! | CGGTTTGTTTGTTTGTTTGA+AGG | + | chr7_4:55138330-55138349 | Msa1163770:intron | 35.0% |
! | CATCCTTATATAAGGTACCA+TGG | - | chr7_4:55138378-55138397 | None:intergenic | 35.0% |
GTAGCAAAAGTCATGTTCAA+AGG | - | chr7_4:55138609-55138628 | None:intergenic | 35.0% | |
! | TTGAACATGACTTTTGCTAC+AGG | + | chr7_4:55138609-55138628 | Msa1163770:intron | 35.0% |
! | AGCCTTTTCTGTAATGTCTT+TGG | - | chr7_4:55138668-55138687 | None:intergenic | 35.0% |
GACATTACAGAAAAGGCTTA+TGG | + | chr7_4:55138670-55138689 | Msa1163770:CDS | 35.0% | |
AGAAAAGGCTTATGGTAGTT+GGG | + | chr7_4:55138678-55138697 | Msa1163770:CDS | 35.0% | |
AGCATGAATATGACAAGGAA+TGG | - | chr7_4:55138725-55138744 | None:intergenic | 35.0% | |
ATTCCTTGTCATATTCATGC+TGG | + | chr7_4:55138724-55138743 | Msa1163770:CDS | 35.0% | |
!! | ACTTGTCTAGGTGGATTTTT+AGG | + | chr7_4:55138819-55138838 | Msa1163770:CDS | 35.0% |
!! | CTTGTCTAGGTGGATTTTTA+GGG | + | chr7_4:55138820-55138839 | Msa1163770:CDS | 35.0% |
!!! | CTTCTCTTTTGTTGCTTTCA+TGG | + | chr7_4:55138898-55138917 | Msa1163770:intron | 35.0% |
TATCCAAAAACCTTTGATGG+AGG | + | chr7_4:55139043-55139062 | Msa1163770:intron | 35.0% | |
ATTAACAGAGAATGCATGGA+TGG | - | chr7_4:55139093-55139112 | None:intergenic | 35.0% | |
CGATATTAACAGAGAATGCA+TGG | - | chr7_4:55139097-55139116 | None:intergenic | 35.0% | |
TTCTAGTCACCTAGCATTAA+CGG | + | chr7_4:55139305-55139324 | Msa1163770:intron | 35.0% | |
AAGAATAAGCCGTTAATGCT+AGG | - | chr7_4:55139317-55139336 | None:intergenic | 35.0% | |
AATGTCATATGCAACCTACA+TGG | - | chr7_4:55139466-55139485 | None:intergenic | 35.0% | |
! | TTCATATCTTTTGTATCCGG+TGG | + | chr7_4:55139720-55139739 | Msa1163770:CDS | 35.0% |
TTACCGAGTTCATAATGTCA+TGG | + | chr7_4:55139822-55139841 | Msa1163770:intron | 35.0% | |
!! | TATTTGGTCGGAACTTGTTT+TGG | + | chr7_4:55139892-55139911 | Msa1163770:CDS | 35.0% |
!!! | TTTTGGTATGCTGCTGTTTT+TGG | + | chr7_4:55139909-55139928 | Msa1163770:CDS | 35.0% |
GAACTATAACTGCTATTAGC+CGG | + | chr7_4:55139931-55139950 | Msa1163770:CDS | 35.0% | |
AACTATAACTGCTATTAGCC+GGG | + | chr7_4:55139932-55139951 | Msa1163770:CDS | 35.0% | |
CACATTATATGCCAAAGAGA+TGG | + | chr7_4:55140021-55140040 | Msa1163770:CDS | 35.0% | |
AAGAAAAACATGAGCACGAA+AGG | - | chr7_4:55140193-55140212 | None:intergenic | 35.0% | |
! | TACAGCAATGATGTTACTTG+AGG | + | chr7_4:55140227-55140246 | Msa1163770:CDS | 35.0% |
! | AATGATGTTACTTGAGGAGA+TGG | + | chr7_4:55140233-55140252 | Msa1163770:CDS | 35.0% |
ACAGAAGTAAATATGGAGTG+AGG | - | chr7_4:55140269-55140288 | None:intergenic | 35.0% | |
ACTTCTGTTTATTGTCCCAA+AGG | + | chr7_4:55140281-55140300 | Msa1163770:CDS | 35.0% | |
CAAGTACGAAAATGACCTTT+GGG | - | chr7_4:55140299-55140318 | None:intergenic | 35.0% | |
CTGTGAAATGCAGTATACTT+AGG | - | chr7_4:55140339-55140358 | None:intergenic | 35.0% | |
! | ACTGTAAATGTTGAAGGTGT+TGG | + | chr7_4:55140419-55140438 | Msa1163770:CDS | 35.0% |
!! | CTGTAAATGTTGAAGGTGTT+GGG | + | chr7_4:55140420-55140439 | Msa1163770:CDS | 35.0% |
GTACATCTGTAACATTCTCT+AGG | + | chr7_4:55140491-55140510 | Msa1163770:intron | 35.0% | |
TGTCTCAATTCCATAGCTTA+TGG | + | chr7_4:55140527-55140546 | Msa1163770:intron | 35.0% | |
!! | ACCTTTGATTTTCAAGAGCA+TGG | + | chr7_4:55140595-55140614 | Msa1163770:CDS | 35.0% |
TCCATGCTCTTGAAAATCAA+AGG | - | chr7_4:55140599-55140618 | None:intergenic | 35.0% | |
AGATGGAGAAATCATTGTTG+AGG | + | chr7_4:55140677-55140696 | Msa1163770:CDS | 35.0% | |
GAGAAATCATTGTTGAGGTA+TGG | + | chr7_4:55140682-55140701 | Msa1163770:intron | 35.0% | |
TCTGAGAAAAGAGTTGACTA+TGG | - | chr7_4:55140928-55140947 | None:intergenic | 35.0% | |
TTCAGAGTAGTTATCCATCA+TGG | + | chr7_4:55141035-55141054 | Msa1163770:CDS | 35.0% | |
TCAGAGTAGTTATCCATCAT+GGG | + | chr7_4:55141036-55141055 | Msa1163770:CDS | 35.0% | |
ATCTTAGAACATTCAGAGAG+CGG | + | chr7_4:55141092-55141111 | Msa1163770:CDS | 35.0% | |
ACAGAAACAGGTTTATATCC+AGG | + | chr7_4:55141197-55141216 | Msa1163770:CDS | 35.0% | |
CAGAAACAGGTTTATATCCA+GGG | + | chr7_4:55141198-55141217 | Msa1163770:CDS | 35.0% | |
AGTACCAATCAAGAAGATAG+GGG | - | chr7_4:55141300-55141319 | None:intergenic | 35.0% | |
GTAGTACCAATCAAGAAGAT+AGG | - | chr7_4:55141302-55141321 | None:intergenic | 35.0% | |
GATGTTCCATTAGAACCATA+TGG | + | chr7_4:55141352-55141371 | Msa1163770:CDS | 35.0% | |
ATACTCAAATGAGTATCACG+AGG | + | chr7_4:55141447-55141466 | Msa1163770:CDS | 35.0% | |
GTTGTTTGGTCATTGAAATC+TGG | - | chr7_4:55141637-55141656 | None:intergenic | 35.0% | |
! | CATGACAAGTTTTCTGATAG+AGG | + | chr7_4:55141667-55141686 | Msa1163770:CDS | 35.0% |
! | ACCAAGAACAACACTTTTAC+TGG | + | chr7_4:55141704-55141723 | Msa1163770:CDS | 35.0% |
!! | TCCAGTAAAAGTGTTGTTCT+TGG | - | chr7_4:55141708-55141727 | None:intergenic | 35.0% |
AACAATGACAGATGACTTAG+AGG | + | chr7_4:55141756-55141775 | Msa1163770:CDS | 35.0% | |
! | GAATTTATAGTGGGAGTTTC+TGG | - | chr7_4:55141826-55141845 | None:intergenic | 35.0% |
CCAAACAAAAAATGTGGGAA+AGG | - | chr7_4:55141885-55141904 | None:intergenic | 35.0% | |
!!! | CCTTTCCCACATTTTTTGTT+TGG | + | chr7_4:55141882-55141901 | Msa1163770:three_prime_UTR | 35.0% |
!!! | TCCCACATTTTTTGTTTGGA+AGG | + | chr7_4:55141886-55141905 | Msa1163770:three_prime_UTR | 35.0% |
CCCTTCCAAACAAAAAATGT+GGG | - | chr7_4:55141890-55141909 | None:intergenic | 35.0% | |
!!! | CCCACATTTTTTGTTTGGAA+GGG | + | chr7_4:55141887-55141906 | Msa1163770:three_prime_UTR | 35.0% |
ACCCTTCCAAACAAAAAATG+TGG | - | chr7_4:55141891-55141910 | None:intergenic | 35.0% | |
!! | GAAGGGTGCTTTCAATTAAA+TGG | + | chr7_4:55141904-55141923 | Msa1163770:three_prime_UTR | 35.0% |
! | GTCCCTCTCTAATTGTTATT+TGG | + | chr7_4:55141953-55141972 | Msa1163770:three_prime_UTR | 35.0% |
TCCTTACATCTGAAAATGGA+AGG | - | chr7_4:55142077-55142096 | None:intergenic | 35.0% | |
! | AGGAGATGAGCATAGGTTTT+TGG | - | chr7_4:55135827-55135846 | None:intergenic | 40.0% |
AGATGATGAAACAGTAGCGA+AGG | - | chr7_4:55136011-55136030 | None:intergenic | 40.0% | |
GAGACACAAATACAGAAACG+TGG | - | chr7_4:55136137-55136156 | None:intergenic | 40.0% | |
GATTATTATCGTTGTCGACG+AGG | - | chr7_4:55136286-55136305 | None:intergenic | 40.0% | |
! | TCCATTGGGTTGTTCCAAAT+TGG | + | chr7_4:55136612-55136631 | Msa1163770:intron | 40.0% |
CAAATATGGGCAACTTGACA+AGG | - | chr7_4:55136935-55136954 | None:intergenic | 40.0% | |
! | CTTGTCAAGTTGCCCATATT+TGG | + | chr7_4:55136933-55136952 | Msa1163770:intron | 40.0% |
ATGAATCGCCAGCCAAATAT+GGG | - | chr7_4:55136948-55136967 | None:intergenic | 40.0% | |
TATGAATCGCCAGCCAAATA+TGG | - | chr7_4:55136949-55136968 | None:intergenic | 40.0% | |
ACAATGTTTAGCAGACCAAG+TGG | + | chr7_4:55137180-55137199 | Msa1163770:exon | 40.0% | |
CTCCATTGAGGAAATCTGAA+GGG | - | chr7_4:55137338-55137357 | None:intergenic | 40.0% | |
TCTCCATTGAGGAAATCTGA+AGG | - | chr7_4:55137339-55137358 | None:intergenic | 40.0% | |
ACTACTGTGAGAAAGGGTTA+TGG | + | chr7_4:55137418-55137437 | Msa1163770:CDS | 40.0% | |
! | CCATCCCACATTTTGCATTA+CGG | - | chr7_4:55137539-55137558 | None:intergenic | 40.0% |
TAAGTGTGAGTGGGGTTAAA+GGG | - | chr7_4:55137620-55137639 | None:intergenic | 40.0% | |
!! | TAGCTTTGGTAAGTGTGAGT+GGG | - | chr7_4:55137629-55137648 | None:intergenic | 40.0% |
!! | ATAGCTTTGGTAAGTGTGAG+TGG | - | chr7_4:55137630-55137649 | None:intergenic | 40.0% |
TTAGTTGAGCAAAGAATCGC+AGG | - | chr7_4:55137701-55137720 | None:intergenic | 40.0% | |
GCGATTCTTTGCTCAACTAA+AGG | + | chr7_4:55137701-55137720 | Msa1163770:CDS | 40.0% | |
CTTACCTGCTGTAGAAAAAC+TGG | - | chr7_4:55137743-55137762 | None:intergenic | 40.0% | |
CTAAAATGCATTGAGGCAGT+TGG | + | chr7_4:55137787-55137806 | Msa1163770:intron | 40.0% | |
!! | TTGTCAACAATTTTGGCCCA+GGG | - | chr7_4:55137900-55137919 | None:intergenic | 40.0% |
!! | TTTGTCAACAATTTTGGCCC+AGG | - | chr7_4:55137901-55137920 | None:intergenic | 40.0% |
CGGAAGGAGAACTACTTAAT+TGG | + | chr7_4:55137999-55138018 | Msa1163770:CDS | 40.0% | |
TTGCTTTCCCCATTTCACAA+TGG | + | chr7_4:55138042-55138061 | Msa1163770:CDS | 40.0% | |
CTGGAAACCATTGTGAAATG+GGG | - | chr7_4:55138052-55138071 | None:intergenic | 40.0% | |
CCTGGAAACCATTGTGAAAT+GGG | - | chr7_4:55138053-55138072 | None:intergenic | 40.0% | |
ACCTGGAAACCATTGTGAAA+TGG | - | chr7_4:55138054-55138073 | None:intergenic | 40.0% | |
CAGGACTAGATTGAACTTTC+GGG | - | chr7_4:55138082-55138101 | None:intergenic | 40.0% | |
AAACGATATTGTGCTCCATC+AGG | - | chr7_4:55138101-55138120 | None:intergenic | 40.0% | |
TACTTACCAAGACCCTTGAA+TGG | + | chr7_4:55138123-55138142 | Msa1163770:CDS | 40.0% | |
TAAAGTCCATTCAAGGGTCT+TGG | - | chr7_4:55138132-55138151 | None:intergenic | 40.0% | |
ACCGATCAAACATGCTATGT+AGG | - | chr7_4:55138166-55138185 | None:intergenic | 40.0% | |
AGGACTATTTAGATGCTCCA+TGG | + | chr7_4:55138358-55138377 | Msa1163770:intron | 40.0% | |
GCTCCATGGTACCTTATATA+AGG | + | chr7_4:55138372-55138391 | Msa1163770:intron | 40.0% | |
! | ACAGGAACTTTTGTGTCAGA+AGG | + | chr7_4:55138627-55138646 | Msa1163770:intron | 40.0% |
! | CAGGAACTTTTGTGTCAGAA+GGG | + | chr7_4:55138628-55138647 | Msa1163770:intron | 40.0% |
CAGAAAAGGCTTATGGTAGT+TGG | + | chr7_4:55138677-55138696 | Msa1163770:CDS | 40.0% | |
ATGCCAGCATGAATATGACA+AGG | - | chr7_4:55138730-55138749 | None:intergenic | 40.0% | |
GAAGATGGTCAAACTTGTCT+AGG | + | chr7_4:55138807-55138826 | Msa1163770:CDS | 40.0% | |
CTACCAAACAATAGCCATGT+AGG | + | chr7_4:55139449-55139468 | Msa1163770:intron | 40.0% | |
CAACCTACATGGCTATTGTT+TGG | - | chr7_4:55139455-55139474 | None:intergenic | 40.0% | |
TATATGTCTTCTGCTGTACC+TGG | + | chr7_4:55139523-55139542 | Msa1163770:intron | 40.0% | |
CTGCCATGACATTATGAACT+CGG | - | chr7_4:55139828-55139847 | None:intergenic | 40.0% | |
AATGTCATGGCAGTCGTTAA+AGG | + | chr7_4:55139835-55139854 | Msa1163770:intron | 40.0% | |
ACCATAGATATTGTTCCCTC+GGG | - | chr7_4:55139990-55140009 | None:intergenic | 40.0% | |
CACCATAGATATTGTTCCCT+CGG | - | chr7_4:55139991-55140010 | None:intergenic | 40.0% | |
TGGCAAAGAAATTACTGACG+TGG | + | chr7_4:55140046-55140065 | Msa1163770:CDS | 40.0% | |
TTATTCCAGGTATTCTGCCT+GGG | + | chr7_4:55140089-55140108 | Msa1163770:intron | 40.0% | |
CCAAGTACGAAAATGACCTT+TGG | - | chr7_4:55140300-55140319 | None:intergenic | 40.0% | |
!! | CCAAAGGTCATTTTCGTACT+TGG | + | chr7_4:55140297-55140316 | Msa1163770:intron | 40.0% |
GAGCATGGAAACTCTCATTA+TGG | + | chr7_4:55140610-55140629 | Msa1163770:CDS | 40.0% | |
!! | TGCTACGAGAGGCATTATAT+GGG | - | chr7_4:55140639-55140658 | None:intergenic | 40.0% |
TCATTGTTGAGGTATGGTCT+TGG | + | chr7_4:55140688-55140707 | Msa1163770:intron | 40.0% | |
! | TAAAAAGCATGCACACACAG+AGG | - | chr7_4:55140831-55140850 | None:intergenic | 40.0% |
! | TGAGTATTTGGTTCCCATGA+TGG | - | chr7_4:55141052-55141071 | None:intergenic | 40.0% |
ATCATGGGAACCAAATACTC+AGG | + | chr7_4:55141051-55141070 | Msa1163770:CDS | 40.0% | |
TCATGGGAACCAAATACTCA+GGG | + | chr7_4:55141052-55141071 | Msa1163770:CDS | 40.0% | |
! | TTTTGCAACTGGCAATCACT+TGG | + | chr7_4:55141237-55141256 | Msa1163770:CDS | 40.0% |
ATAGGGGTGATTATTCTGGT+TGG | - | chr7_4:55141284-55141303 | None:intergenic | 40.0% | |
GAAGATAGGGGTGATTATTC+TGG | - | chr7_4:55141288-55141307 | None:intergenic | 40.0% | |
ATCACCCCTATCTTCTTGAT+TGG | + | chr7_4:55141293-55141312 | Msa1163770:CDS | 40.0% | |
!! | TCATTCTGTGTCAAGTTGGA+AGG | - | chr7_4:55141412-55141431 | None:intergenic | 40.0% |
CAAATGAGTATCACGAGGAT+CGG | + | chr7_4:55141452-55141471 | Msa1163770:CDS | 40.0% | |
AAATGAGTATCACGAGGATC+GGG | + | chr7_4:55141453-55141472 | Msa1163770:CDS | 40.0% | |
GTTTGGTCATTGAAATCTGG+AGG | - | chr7_4:55141634-55141653 | None:intergenic | 40.0% | |
! | TTTATAGTGGGAGTTTCTGG+AGG | - | chr7_4:55141823-55141842 | None:intergenic | 40.0% |
! | GCAGTGCTGGAATTTATAGT+GGG | - | chr7_4:55141835-55141854 | None:intergenic | 40.0% |
! | AGCAGTGCTGGAATTTATAG+TGG | - | chr7_4:55141836-55141855 | None:intergenic | 40.0% |
TATGAACCTCAGCTTGATGT+TGG | + | chr7_4:55142028-55142047 | Msa1163770:three_prime_UTR | 40.0% | |
TAAGTTCCAACATCAAGCTG+AGG | - | chr7_4:55142037-55142056 | None:intergenic | 40.0% | |
! | GCCTTCCATTTTCAGATGTA+AGG | + | chr7_4:55142073-55142092 | Msa1163770:three_prime_UTR | 40.0% |
GATGAAACAGTAGCGAAGGA+AGG | - | chr7_4:55136007-55136026 | None:intergenic | 45.0% | |
GAATTGAAGTTAGCAGTCCG+AGG | + | chr7_4:55136467-55136486 | Msa1163770:intron | 45.0% | |
! | GCCAATTTGGAACAACCCAA+TGG | - | chr7_4:55136616-55136635 | None:intergenic | 45.0% |
! | TCAAGTTGCCCATATTTGGC+TGG | + | chr7_4:55136937-55136956 | Msa1163770:intron | 45.0% |
CCATTCCCCAAAGACCAAAA+CGG | - | chr7_4:55137126-55137145 | None:intergenic | 45.0% | |
! | TTGGTCTTTGGGGAATGGAT+TGG | + | chr7_4:55137128-55137147 | Msa1163770:five_prime_UTR | 45.0% |
TTTAGCAGACCAAGTGGTTC+CGG | + | chr7_4:55137186-55137205 | Msa1163770:CDS | 45.0% | |
AGCCCTTCAGATTTCCTCAA+TGG | + | chr7_4:55137333-55137352 | Msa1163770:CDS | 45.0% | |
! | GGGTTCACCATATGCTTTTC+AGG | + | chr7_4:55137480-55137499 | Msa1163770:CDS | 45.0% |
GGCTCCGTAATGCAAAATGT+GGG | + | chr7_4:55137532-55137551 | Msa1163770:CDS | 45.0% | |
CCGTAATGCAAAATGTGGGA+TGG | + | chr7_4:55137536-55137555 | Msa1163770:CDS | 45.0% | |
GGAATTAAGCCCTGTGATCT+TGG | + | chr7_4:55137573-55137592 | Msa1163770:CDS | 45.0% | |
GCTTCTTTGCCAAGATCACA+GGG | - | chr7_4:55137585-55137604 | None:intergenic | 45.0% | |
AGCTTCTTTGCCAAGATCAC+AGG | - | chr7_4:55137586-55137605 | None:intergenic | 45.0% | |
GTAAGTGTGAGTGGGGTTAA+AGG | - | chr7_4:55137621-55137640 | None:intergenic | 45.0% | |
! | AGCTTTGGTAAGTGTGAGTG+GGG | - | chr7_4:55137628-55137647 | None:intergenic | 45.0% |
! | TACGCCAGTTTTTCTACAGC+AGG | + | chr7_4:55137736-55137755 | Msa1163770:CDS | 45.0% |
TCGGAAACTATGTGTGCTGA+AGG | + | chr7_4:55137941-55137960 | Msa1163770:CDS | 45.0% | |
CCCATTTCACAATGGTTTCC+AGG | + | chr7_4:55138050-55138069 | Msa1163770:CDS | 45.0% | |
TGCTGGCATATCTCTTTCTG+AGG | + | chr7_4:55138741-55138760 | Msa1163770:CDS | 45.0% | |
TTCGAGATGATGCTGTGCTT+GGG | - | chr7_4:55138790-55138809 | None:intergenic | 45.0% | |
GATGGTCAAACTTGTCTAGG+TGG | + | chr7_4:55138810-55138829 | Msa1163770:CDS | 45.0% | |
TATAGGTCGACCATCTCTTC+AGG | + | chr7_4:55139616-55139635 | Msa1163770:intron | 45.0% | |
TAATCCGATGCCTGAAGAGA+TGG | - | chr7_4:55139629-55139648 | None:intergenic | 45.0% | |
TGCAATTGCAGATGAGCTTC+TGG | + | chr7_4:55139956-55139975 | Msa1163770:CDS | 45.0% | |
TCCCGAGGGAACAATATCTA+TGG | + | chr7_4:55139986-55140005 | Msa1163770:CDS | 45.0% | |
CGAGGGAACAATATCTATGG+TGG | + | chr7_4:55139989-55140008 | Msa1163770:CDS | 45.0% | |
TATATGCCAAAGAGATGGCG+TGG | + | chr7_4:55140026-55140045 | Msa1163770:CDS | 45.0% | |
CAGGCAGAATACCTGGAATA+AGG | - | chr7_4:55140090-55140109 | None:intergenic | 45.0% | |
CTTATTCCAGGTATTCTGCC+TGG | + | chr7_4:55140088-55140107 | Msa1163770:intron | 45.0% | |
TATTCCAGGTATTCTGCCTG+GGG | + | chr7_4:55140090-55140109 | Msa1163770:intron | 45.0% | |
!! | GCTACGAGAGGCATTATATG+GGG | - | chr7_4:55140638-55140657 | None:intergenic | 45.0% |
!! | CTGCTACGAGAGGCATTATA+TGG | - | chr7_4:55140640-55140659 | None:intergenic | 45.0% |
ATAATGCCTCTCGTAGCAGA+AGG | + | chr7_4:55140641-55140660 | Msa1163770:CDS | 45.0% | |
AAGGAGTTCACAGGGAAAGA+TGG | + | chr7_4:55140660-55140679 | Msa1163770:CDS | 45.0% | |
CATGGGAACCAAATACTCAG+GGG | + | chr7_4:55141053-55141072 | Msa1163770:CDS | 45.0% | |
AACTGCTTCCCCTGAGTATT+TGG | - | chr7_4:55141064-55141083 | None:intergenic | 45.0% | |
GAGCGGAAGTTATCAGTACA+TGG | + | chr7_4:55141109-55141128 | Msa1163770:CDS | 45.0% | |
!! | CCAGTTGCAAAAGTGCTGTA+TGG | - | chr7_4:55141229-55141248 | None:intergenic | 45.0% |
! | CCATACAGCACTTTTGCAAC+TGG | + | chr7_4:55141226-55141245 | Msa1163770:CDS | 45.0% |
GCAATCACTTGGATTCGTTG+TGG | + | chr7_4:55141248-55141267 | Msa1163770:CDS | 45.0% | |
TCTCTTGAAGCTGCATCATG+AGG | - | chr7_4:55141334-55141353 | None:intergenic | 45.0% | |
GGGTTCATTCTGTGTCAAGT+TGG | - | chr7_4:55141416-55141435 | None:intergenic | 45.0% | |
CTAAAGCTCTCCCTAAGGAT+GGG | - | chr7_4:55141511-55141530 | None:intergenic | 45.0% | |
ACTAAAGCTCTCCCTAAGGA+TGG | - | chr7_4:55141512-55141531 | None:intergenic | 45.0% | |
! | GTTTTCTGATAGAGGGTCAG+AGG | + | chr7_4:55141675-55141694 | Msa1163770:CDS | 45.0% |
ATGACAGATGACTTAGAGGC+AGG | + | chr7_4:55141760-55141779 | Msa1163770:CDS | 45.0% | |
TACTCAAAAGCTAGCAGTGC+TGG | - | chr7_4:55141848-55141867 | None:intergenic | 45.0% | |
AGAGAGGGACAATCATGACT+TGG | - | chr7_4:55141943-55141962 | None:intergenic | 45.0% | |
GGGGTCCTTACATCTGAAAA+TGG | - | chr7_4:55142081-55142100 | None:intergenic | 45.0% | |
GTTCGGAAGGAGATGAGCAT+AGG | - | chr7_4:55135834-55135853 | None:intergenic | 50.0% | |
TCAACGCCAAAGTCCCAAAG+GGG | - | chr7_4:55136785-55136804 | None:intergenic | 50.0% | |
GTCAACGCCAAAGTCCCAAA+GGG | - | chr7_4:55136786-55136805 | None:intergenic | 50.0% | |
TGTCAACGCCAAAGTCCCAA+AGG | - | chr7_4:55136787-55136806 | None:intergenic | 50.0% | |
!! | CCGTTTTGGTCTTTGGGGAA+TGG | + | chr7_4:55137123-55137142 | Msa1163770:five_prime_UTR | 50.0% |
!! | CTAAAAGCACCGGAACCACT+TGG | - | chr7_4:55137198-55137217 | None:intergenic | 50.0% |
GGGCTCCGTAATGCAAAATG+TGG | + | chr7_4:55137531-55137550 | Msa1163770:CDS | 50.0% | |
GGGATGGATGCTGTTGAATC+TGG | + | chr7_4:55137552-55137571 | Msa1163770:CDS | 50.0% | |
AGTCATGAGACTGATGCGGA+AGG | + | chr7_4:55137983-55138002 | Msa1163770:CDS | 50.0% | |
TCACAATGGTTTCCAGGTGC+TGG | + | chr7_4:55138056-55138075 | Msa1163770:CDS | 50.0% | |
CTTCGAGATGATGCTGTGCT+TGG | - | chr7_4:55138791-55138810 | None:intergenic | 50.0% | |
GCACAGCATCATCTCGAAGA+TGG | + | chr7_4:55138792-55138811 | Msa1163770:CDS | 50.0% | |
! | GGGCCTCCATCAAAGGTTTT+TGG | - | chr7_4:55139049-55139068 | None:intergenic | 50.0% |
TCGACCATCTCTTCAGGCAT+CGG | + | chr7_4:55139622-55139641 | Msa1163770:CDS | 50.0% | |
CAGAATTGCAGCAAAGCCAC+CGG | - | chr7_4:55139739-55139758 | None:intergenic | 50.0% | |
!! | CTTCTGGTCTTAGATCCCGA+GGG | + | chr7_4:55139972-55139991 | Msa1163770:CDS | 50.0% |
TCTTTGCCACGCCATCTCTT+TGG | - | chr7_4:55140035-55140054 | None:intergenic | 50.0% | |
! | ATGTATTGATCGGACACCCC+AGG | - | chr7_4:55140109-55140128 | None:intergenic | 50.0% |
!! | AAGGTGTTGGGCATGTTTGC+AGG | + | chr7_4:55140432-55140451 | Msa1163770:CDS | 50.0% |
GGCATGTTTGCAGGTTAGCA+TGG | + | chr7_4:55140441-55140460 | Msa1163770:intron | 50.0% | |
TGAACTCCTTCTGCTACGAG+AGG | - | chr7_4:55140650-55140669 | None:intergenic | 50.0% | |
TCGTAGCAGAAGGAGTTCAC+AGG | + | chr7_4:55140651-55140670 | Msa1163770:CDS | 50.0% | |
CGTAGCAGAAGGAGTTCACA+GGG | + | chr7_4:55140652-55140671 | Msa1163770:CDS | 50.0% | |
CATCTTCCCCTCCTAGAATG+TGG | + | chr7_4:55141143-55141162 | Msa1163770:CDS | 50.0% | |
TTCCCCTCCTAGAATGTGGA+GGG | + | chr7_4:55141147-55141166 | Msa1163770:CDS | 50.0% | |
! | TACCCCTCCACATTCTAGGA+GGG | - | chr7_4:55141153-55141172 | None:intergenic | 50.0% |
TCTTCATCCCCTGCCGTATT+GGG | - | chr7_4:55141178-55141197 | None:intergenic | 50.0% | |
CAGGGGATGAAGACAGAAAC+AGG | + | chr7_4:55141185-55141204 | Msa1163770:CDS | 50.0% | |
AGTGCTGTATGGCATTTCCC+TGG | - | chr7_4:55141218-55141237 | None:intergenic | 50.0% | |
!! | GGAAGGCATCGAATAGTCTC+TGG | - | chr7_4:55141395-55141414 | None:intergenic | 50.0% |
ATCGGGCTGCATCTCAACTT+GGG | + | chr7_4:55141470-55141489 | Msa1163770:CDS | 50.0% | |
CTCATCAGCTCCCATCCTTA+GGG | + | chr7_4:55141498-55141517 | Msa1163770:CDS | 50.0% | |
CCTGACTAAAGCTCTCCCTA+AGG | - | chr7_4:55141516-55141535 | None:intergenic | 50.0% | |
! | CCTTAGGGAGAGCTTTAGTC+AGG | + | chr7_4:55141513-55141532 | Msa1163770:CDS | 50.0% |
TTCTAGCCCACCAATGGCTT+CGG | - | chr7_4:55141570-55141589 | None:intergenic | 50.0% | |
AGGACCCCAGCAAAATAGTC+TGG | + | chr7_4:55142093-55142112 | Msa1163770:three_prime_UTR | 50.0% | |
TTAGGTTCAGCTCGCCCCTT+TGG | + | chr7_4:55136768-55136787 | Msa1163770:intron | 55.0% | |
TAGGTTCAGCTCGCCCCTTT+GGG | + | chr7_4:55136769-55136788 | Msa1163770:intron | 55.0% | |
GGCGCGTCATCTTTGACTAG+AGG | + | chr7_4:55137240-55137259 | Msa1163770:CDS | 55.0% | |
TACGGAAGGATCCCAAGTCC+AGG | + | chr7_4:55137303-55137322 | Msa1163770:CDS | 55.0% | |
GGCTCTCACTTCCTGGACTT+GGG | - | chr7_4:55137317-55137336 | None:intergenic | 55.0% | |
TCTGAAGGGCTCTCACTTCC+TGG | - | chr7_4:55137324-55137343 | None:intergenic | 55.0% | |
! | CACTGATGGGCCTCCATCAA+AGG | - | chr7_4:55139056-55139075 | None:intergenic | 55.0% |
CTTTGATGGAGGCCCATCAG+TGG | + | chr7_4:55139054-55139073 | Msa1163770:intron | 55.0% | |
GCTCATCTGCAATTGCAGCC+CGG | - | chr7_4:55139953-55139972 | None:intergenic | 55.0% | |
!! | GCTTCTGGTCTTAGATCCCG+AGG | + | chr7_4:55139971-55139990 | Msa1163770:CDS | 55.0% |
CTTCCCCTCCTAGAATGTGG+AGG | + | chr7_4:55141146-55141165 | Msa1163770:CDS | 55.0% | |
TCCCCTCCTAGAATGTGGAG+GGG | + | chr7_4:55141148-55141167 | Msa1163770:CDS | 55.0% | |
! | ACCCCTCCACATTCTAGGAG+GGG | - | chr7_4:55141152-55141171 | None:intergenic | 55.0% |
CTACCCCTCCACATTCTAGG+AGG | - | chr7_4:55141154-55141173 | None:intergenic | 55.0% | |
GGACTACCCCTCCACATTCT+AGG | - | chr7_4:55141157-55141176 | None:intergenic | 55.0% | |
GTGGAGGGGTAGTCCCAATA+CGG | + | chr7_4:55141162-55141181 | Msa1163770:CDS | 55.0% | |
GTCTTCATCCCCTGCCGTAT+TGG | - | chr7_4:55141179-55141198 | None:intergenic | 55.0% | |
GATCGGGCTGCATCTCAACT+TGG | + | chr7_4:55141469-55141488 | Msa1163770:CDS | 55.0% | |
TCGGGCTGCATCTCAACTTG+GGG | + | chr7_4:55141471-55141490 | Msa1163770:CDS | 55.0% | |
CCTAAGGATGGGAGCTGATG+AGG | - | chr7_4:55141500-55141519 | None:intergenic | 55.0% | |
CCTCATCAGCTCCCATCCTT+AGG | + | chr7_4:55141497-55141516 | Msa1163770:CDS | 55.0% | |
TCTAGCCCACCAATGGCTTC+GGG | - | chr7_4:55141569-55141588 | None:intergenic | 55.0% | |
GACGACTTCTAGCCCACCAA+TGG | - | chr7_4:55141576-55141595 | None:intergenic | 55.0% | |
!! | GGTGGGCTAGAAGTCGTCTA+CGG | + | chr7_4:55141578-55141597 | Msa1163770:CDS | 55.0% |
GCTAGAAGTCGTCTACGGAG+TGG | + | chr7_4:55141583-55141602 | Msa1163770:CDS | 55.0% | |
TCTACGGAGTGGACAAGCTC+AGG | + | chr7_4:55141594-55141613 | Msa1163770:CDS | 55.0% | |
!! | AGCTCGCCCCTTTGGGACTT+TGG | + | chr7_4:55136776-55136795 | Msa1163770:five_prime_UTR | 60.0% |
GGGCTCTCACTTCCTGGACT+TGG | - | chr7_4:55137318-55137337 | None:intergenic | 60.0% | |
TGAACTTTCGGGCCAGCACC+TGG | - | chr7_4:55138071-55138090 | None:intergenic | 60.0% | |
GACACCCCAGGCAGAATACC+TGG | - | chr7_4:55140097-55140116 | None:intergenic | 60.0% | |
AGGGGTAGTCCCAATACGGC+AGG | + | chr7_4:55141166-55141185 | Msa1163770:CDS | 60.0% | |
GGGGTAGTCCCAATACGGCA+GGG | + | chr7_4:55141167-55141186 | Msa1163770:CDS | 60.0% | |
GGGTAGTCCCAATACGGCAG+GGG | + | chr7_4:55141168-55141187 | Msa1163770:CDS | 60.0% | |
!! | CAATGGCTTCGGGTTGCGTG+GGG | - | chr7_4:55141559-55141578 | None:intergenic | 60.0% |
!! | CCAATGGCTTCGGGTTGCGT+GGG | - | chr7_4:55141560-55141579 | None:intergenic | 60.0% |
!! | ACCAATGGCTTCGGGTTGCG+TGG | - | chr7_4:55141561-55141580 | None:intergenic | 60.0% |
ACGCAACCCGAAGCCATTGG+TGG | + | chr7_4:55141560-55141579 | Msa1163770:CDS | 60.0% | |
CGCAACCCGAAGCCATTGGT+GGG | + | chr7_4:55141561-55141580 | Msa1163770:CDS | 60.0% | |
CCCACGCAACCCGAAGCCAT+TGG | + | chr7_4:55141557-55141576 | Msa1163770:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 55135777 | 55142116 | 55135777 | ID=Msa1163770;Name=Msa1163770 |
chr7_4 | mRNA | 55135777 | 55142116 | 55135777 | ID=Msa1163770-mRNA-1;Parent=Msa1163770;Name=Msa1163770-mRNA-1;_AED=0.05;_eAED=0.05;_QI=415|1|1|1|0.8|0.72|11|252|865 |
chr7_4 | exon | 55135777 | 55136054 | 55135777 | ID=Msa1163770-mRNA-1:exon:16086;Parent=Msa1163770-mRNA-1 |
chr7_4 | exon | 55136772 | 55136835 | 55136772 | ID=Msa1163770-mRNA-1:exon:16087;Parent=Msa1163770-mRNA-1 |
chr7_4 | exon | 55137110 | 55137757 | 55137110 | ID=Msa1163770-mRNA-1:exon:16088;Parent=Msa1163770-mRNA-1 |
chr7_4 | exon | 55137863 | 55138183 | 55137863 | ID=Msa1163770-mRNA-1:exon:16089;Parent=Msa1163770-mRNA-1 |
chr7_4 | exon | 55138631 | 55138853 | 55138631 | ID=Msa1163770-mRNA-1:exon:16090;Parent=Msa1163770-mRNA-1 |
chr7_4 | exon | 55139621 | 55139800 | 55139621 | ID=Msa1163770-mRNA-1:exon:16091;Parent=Msa1163770-mRNA-1 |
chr7_4 | exon | 55139891 | 55140097 | 55139891 | ID=Msa1163770-mRNA-1:exon:16092;Parent=Msa1163770-mRNA-1 |
chr7_4 | exon | 55140225 | 55140302 | 55140225 | ID=Msa1163770-mRNA-1:exon:16093;Parent=Msa1163770-mRNA-1 |
chr7_4 | exon | 55140383 | 55140453 | 55140383 | ID=Msa1163770-mRNA-1:exon:16094;Parent=Msa1163770-mRNA-1 |
chr7_4 | exon | 55140588 | 55140698 | 55140588 | ID=Msa1163770-mRNA-1:exon:16095;Parent=Msa1163770-mRNA-1 |
chr7_4 | exon | 55141033 | 55142116 | 55141033 | ID=Msa1163770-mRNA-1:exon:16096;Parent=Msa1163770-mRNA-1 |
chr7_4 | five_prime_UTR | 55135777 | 55136054 | 55135777 | ID=Msa1163770-mRNA-1:five_prime_utr;Parent=Msa1163770-mRNA-1 |
chr7_4 | five_prime_UTR | 55136772 | 55136835 | 55136772 | ID=Msa1163770-mRNA-1:five_prime_utr;Parent=Msa1163770-mRNA-1 |
chr7_4 | five_prime_UTR | 55137110 | 55137182 | 55137110 | ID=Msa1163770-mRNA-1:five_prime_utr;Parent=Msa1163770-mRNA-1 |
chr7_4 | CDS | 55137183 | 55137757 | 55137183 | ID=Msa1163770-mRNA-1:cds;Parent=Msa1163770-mRNA-1 |
chr7_4 | CDS | 55137863 | 55138183 | 55137863 | ID=Msa1163770-mRNA-1:cds;Parent=Msa1163770-mRNA-1 |
chr7_4 | CDS | 55138631 | 55138853 | 55138631 | ID=Msa1163770-mRNA-1:cds;Parent=Msa1163770-mRNA-1 |
chr7_4 | CDS | 55139621 | 55139800 | 55139621 | ID=Msa1163770-mRNA-1:cds;Parent=Msa1163770-mRNA-1 |
chr7_4 | CDS | 55139891 | 55140097 | 55139891 | ID=Msa1163770-mRNA-1:cds;Parent=Msa1163770-mRNA-1 |
chr7_4 | CDS | 55140225 | 55140302 | 55140225 | ID=Msa1163770-mRNA-1:cds;Parent=Msa1163770-mRNA-1 |
chr7_4 | CDS | 55140383 | 55140453 | 55140383 | ID=Msa1163770-mRNA-1:cds;Parent=Msa1163770-mRNA-1 |
chr7_4 | CDS | 55140588 | 55140698 | 55140588 | ID=Msa1163770-mRNA-1:cds;Parent=Msa1163770-mRNA-1 |
chr7_4 | CDS | 55141033 | 55141864 | 55141033 | ID=Msa1163770-mRNA-1:cds;Parent=Msa1163770-mRNA-1 |
chr7_4 | three_prime_UTR | 55141865 | 55142116 | 55141865 | ID=Msa1163770-mRNA-1:three_prime_utr;Parent=Msa1163770-mRNA-1 |
Gene Sequence |
Protein sequence |