Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1170100 | XP_024625750.1 | 96.536 | 866 | 29 | 1 | 1 | 865 | 1 | 866 | 0.0 | 1753 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1170100 | sp|Q8RUS5|ATG9_ARATH | 65.533 | 882 | 265 | 15 | 1 | 862 | 2 | 864 | 0.0 | 1121 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1170100 | A0A396H5X9 | 96.536 | 866 | 29 | 1 | 1 | 865 | 1 | 866 | 0.0 | 1753 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1163560 | Msa1170100 | 0.934251 | 5.389549e-96 | -8.615850e-47 |
Msa1163760 | Msa1170100 | 0.925150 | 2.706445e-90 | -8.615850e-47 |
Msa1163770 | Msa1170100 | 0.979562 | 3.062070e-148 | -8.615850e-47 |
Msa1170100 | Msa1170580 | 0.955379 | 3.473900e-113 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1170100 | MtrunA17_Chr7g0261081 | 96.536 | 866 | 29 | 1 | 1 | 865 | 1 | 866 | 0.0 | 1753 |
Msa1170100 | MtrunA17_Chr1g0184191 | 77.560 | 869 | 188 | 6 | 1 | 865 | 1 | 866 | 0.0 | 1395 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1170100 | AT2G31260.1 | 65.533 | 882 | 265 | 15 | 1 | 862 | 2 | 864 | 0.0 | 1121 |
Find 248 sgRNAs with CRISPR-Local
Find 427 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCTTCTTTGAAAGACTTTA+TGG | 0.100521 | 7_4:-63190250 | Msa1170100:CDS |
GAATTTATAGTGGGAGTTTC+TGG | 0.112453 | 7_4:+63185820 | None:intergenic |
GTCCCTCTCTAATTGTTATT+TGG | 0.145427 | 7_4:-63185690 | Msa1170100:three_prime_UTR |
AACTGCTTCCCCTGAGTATT+TGG | 0.152672 | 7_4:+63186582 | None:intergenic |
AACAACTTTGTCAACAATTT+TGG | 0.153920 | 7_4:+63189739 | None:intergenic |
GAAGGGTGCTTTCAATTAAA+TGG | 0.190594 | 7_4:-63185739 | Msa1170100:three_prime_UTR |
GGAGAATTTAATCTACATTT+TGG | 0.223978 | 7_4:-63185862 | Msa1170100:CDS |
AAAATATCATTGCAGATATT+TGG | 0.224381 | 7_4:-63187767 | Msa1170100:intron |
CCCTTGAATGGACTTTAAAT+TGG | 0.245163 | 7_4:-63189508 | Msa1170100:CDS |
TGTAGAACCAATTGCTGATT+TGG | 0.253494 | 7_4:-63190275 | Msa1170100:CDS |
CCCATTTCACAATGGTTTCC+AGG | 0.256603 | 7_4:-63189593 | Msa1170100:CDS |
GTAAGTGTGAGTGGGGTTAA+AGG | 0.263267 | 7_4:+63190025 | None:intergenic |
GTCTTCATCCCCTGCCGTAT+TGG | 0.264537 | 7_4:+63186467 | None:intergenic |
CGGAAGGAGAACTACTTAAT+TGG | 0.265768 | 7_4:-63189644 | Msa1170100:CDS |
GTTATTCCATATGGTTCTAA+TGG | 0.268064 | 7_4:+63186285 | None:intergenic |
CTGCTACGAGAGGCATTATA+TGG | 0.271120 | 7_4:+63187006 | None:intergenic |
TTCTAGCCCACCAATGGCTT+CGG | 0.278161 | 7_4:+63186076 | None:intergenic |
CAGGACTAGATTGAACTTTC+GGG | 0.278462 | 7_4:+63189564 | None:intergenic |
TCTGAAGGGCTCTCACTTCC+TGG | 0.293553 | 7_4:+63190322 | None:intergenic |
TCTTCATCCCCTGCCGTATT+GGG | 0.293680 | 7_4:+63186468 | None:intergenic |
TCCAGTAAAAGTGTTGTTCT+TGG | 0.302842 | 7_4:+63185938 | None:intergenic |
CCTCATCAGCTCCCATCCTT+AGG | 0.305842 | 7_4:-63186146 | Msa1170100:CDS |
TGCAATTGCAGATGAGCTTC+TGG | 0.319750 | 7_4:-63187687 | Msa1170100:CDS |
GGGCTCTCACTTCCTGGACT+TGG | 0.325164 | 7_4:+63190328 | None:intergenic |
TCAGGACTAGATTGAACTTT+CGG | 0.327003 | 7_4:+63189563 | None:intergenic |
GAAGATAGGGGTGATTATTC+TGG | 0.327635 | 7_4:+63186358 | None:intergenic |
AGCTATTATTGTTGGATACT+TGG | 0.328327 | 7_4:-63189999 | Msa1170100:CDS |
AGCTCGCCCCTTTGGGACTT+TGG | 0.342784 | 7_4:-63190867 | Msa1170100:five_prime_UTR |
GGACTACCCCTCCACATTCT+AGG | 0.344102 | 7_4:+63186489 | None:intergenic |
ACAATAAACAGAAGTAAATA+TGG | 0.345471 | 7_4:+63187370 | None:intergenic |
AAGGTGTTGGGCATGTTTGC+AGG | 0.345877 | 7_4:-63187211 | Msa1170100:intron |
GAACCTTGTTATAACCGTTT+TGG | 0.346406 | 7_4:-63190534 | Msa1170100:five_prime_UTR |
TTTGAGTATTCTTCATAGTT+GGG | 0.347898 | 7_4:+63186210 | None:intergenic |
ATTTGAGTATTCTTCATAGT+TGG | 0.350704 | 7_4:+63186209 | None:intergenic |
TAACGTTCTGTTATTCCATA+TGG | 0.351902 | 7_4:+63186276 | None:intergenic |
TACTATATGTTGATTGGAAT+GGG | 0.357764 | 7_4:-63190132 | Msa1170100:CDS |
GATTGTTGAACTTCTAAGTC+TGG | 0.359203 | 7_4:-63190185 | Msa1170100:CDS |
CTTACCAAAGCTATTATTGT+TGG | 0.359747 | 7_4:-63190007 | Msa1170100:CDS |
TATTTGGTCGGAACTTGTTT+TGG | 0.363325 | 7_4:-63187751 | Msa1170100:CDS |
TTAGGTTCAGCTCGCCCCTT+TGG | 0.364104 | 7_4:-63190875 | Msa1170100:intron |
CCTGGAAACCATTGTGAAAT+GGG | 0.364513 | 7_4:+63189593 | None:intergenic |
CAGAAAAGGCTTATGGTAGT+TGG | 0.367074 | 7_4:-63188966 | Msa1170100:CDS |
TCTAGCCCACCAATGGCTTC+GGG | 0.369897 | 7_4:+63186077 | None:intergenic |
TGAATTTGAAACCTTATTCC+AGG | 0.371525 | 7_4:-63187567 | Msa1170100:intron |
GTTGTTTGGTCATTGAAATC+TGG | 0.373910 | 7_4:+63186009 | None:intergenic |
ATCACCCCTATCTTCTTGAT+TGG | 0.376879 | 7_4:-63186350 | Msa1170100:CDS |
TCTTTGCCACGCCATCTCTT+TGG | 0.378039 | 7_4:+63187611 | None:intergenic |
CAGGCAGAATACCTGGAATA+AGG | 0.378454 | 7_4:+63187556 | None:intergenic |
TTTGCTGTATATAGATTCAT+TGG | 0.378561 | 7_4:-63185656 | Msa1170100:three_prime_UTR |
GGAATTAAGCCCTGTGATCT+TGG | 0.378592 | 7_4:-63190070 | Msa1170100:CDS |
GACATTACAGAAAAGGCTTA+TGG | 0.380010 | 7_4:-63188973 | Msa1170100:CDS |
AACAATGACAGATGACTTAG+AGG | 0.383575 | 7_4:-63185887 | Msa1170100:CDS |
TCACAATGGTTTCCAGGTGC+TGG | 0.383647 | 7_4:-63189587 | Msa1170100:CDS |
TTCAACATTTACAGTGAAAT+CGG | 0.386132 | 7_4:+63187232 | None:intergenic |
GCTATTATTGTTGGATACTT+GGG | 0.389328 | 7_4:-63189998 | Msa1170100:CDS |
TTTAGCAGACCAAGTGGTTC+CGG | 0.389483 | 7_4:-63190457 | Msa1170100:CDS |
TAAAGTCCATTCAAGGGTCT+TGG | 0.389766 | 7_4:+63189514 | None:intergenic |
GAGCATGGAAACTCTCATTA+TGG | 0.390073 | 7_4:-63187033 | Msa1170100:CDS |
ACCTGGAAACCATTGTGAAA+TGG | 0.391785 | 7_4:+63189592 | None:intergenic |
CATGATAATTATATGTTGTT+TGG | 0.395237 | 7_4:+63185995 | None:intergenic |
TACTCAAAAGCTAGCAGTGC+TGG | 0.395445 | 7_4:+63185798 | None:intergenic |
GTAGTACCAATCAAGAAGAT+AGG | 0.404579 | 7_4:+63186344 | None:intergenic |
GATCGGGCTGCATCTCAACT+TGG | 0.409523 | 7_4:-63186174 | Msa1170100:CDS |
CTTCGAGATGATGCTGTGCT+TGG | 0.409901 | 7_4:+63188855 | None:intergenic |
AGAAAAGGCTTATGGTAGTT+GGG | 0.415599 | 7_4:-63188965 | Msa1170100:CDS |
TGAGTATTTGGTTCCCATGA+TGG | 0.416490 | 7_4:+63186594 | None:intergenic |
GGCTCTCACTTCCTGGACTT+GGG | 0.417635 | 7_4:+63190329 | None:intergenic |
GGGATGGATGCTGTTGAATC+TGG | 0.418976 | 7_4:-63190091 | Msa1170100:CDS |
TTCAGAGTAGTTATCCATCA+TGG | 0.419889 | 7_4:-63186608 | Msa1170100:CDS |
ATCGGGCTGCATCTCAACTT+GGG | 0.423241 | 7_4:-63186173 | Msa1170100:CDS |
GAAACAAAACATCCAATAGA+AGG | 0.424244 | 7_4:+63189967 | None:intergenic |
TTACTATATGTTGATTGGAA+TGG | 0.426389 | 7_4:-63190133 | Msa1170100:CDS |
GGGGTCCTTACATCTGAAAA+TGG | 0.427595 | 7_4:+63185565 | None:intergenic |
AGCTTCTTTGCCAAGATCAC+AGG | 0.430987 | 7_4:+63190060 | None:intergenic |
TCCCGAGGGAACAATATCTA+TGG | 0.431420 | 7_4:-63187657 | Msa1170100:CDS |
TTGGTCTTTGGGGAATGGAT+TGG | 0.441248 | 7_4:-63190515 | Msa1170100:five_prime_UTR |
ACCAATTTAAAGTCCATTCA+AGG | 0.443781 | 7_4:+63189507 | None:intergenic |
CAGGGGATGAAGACAGAAAC+AGG | 0.448292 | 7_4:-63186458 | Msa1170100:CDS |
ATTGTTGAACTTCTAAGTCT+GGG | 0.448533 | 7_4:-63190184 | Msa1170100:CDS |
AAGGAGTTCACAGGGAAAGA+TGG | 0.449011 | 7_4:-63186983 | Msa1170100:CDS |
TATGGTTACTACTGTGAGAA+AGG | 0.450099 | 7_4:-63190232 | Msa1170100:CDS |
CACCATAGATATTGTTCCCT+CGG | 0.451923 | 7_4:+63187655 | None:intergenic |
TAAGTGTGAGTGGGGTTAAA+GGG | 0.453021 | 7_4:+63190026 | None:intergenic |
GTATCCAACAATAATAGCTT+TGG | 0.455646 | 7_4:+63190003 | None:intergenic |
AGCCCTTCAGATTTCCTCAA+TGG | 0.457772 | 7_4:-63190310 | Msa1170100:CDS |
AAGAGATCCAAATCAGCAAT+TGG | 0.458966 | 7_4:+63190268 | None:intergenic |
CCTTAGGGAGAGCTTTAGTC+AGG | 0.459193 | 7_4:-63186130 | Msa1170100:CDS |
GCGATTCTTTGCTCAACTAA+AGG | 0.459966 | 7_4:-63189942 | Msa1170100:CDS |
TACTTACCAAGACCCTTGAA+TGG | 0.460856 | 7_4:-63189520 | Msa1170100:CDS |
ACCAATGGCTTCGGGTTGCG+TGG | 0.462694 | 7_4:+63186085 | None:intergenic |
TGAACTTTCGGGCCAGCACC+TGG | 0.463130 | 7_4:+63189575 | None:intergenic |
ATCCAAAGACATTACAGAAA+AGG | 0.464783 | 7_4:-63188980 | Msa1170100:CDS |
AGCAGTGCTGGAATTTATAG+TGG | 0.465268 | 7_4:+63185810 | None:intergenic |
ACAGAAACAGGTTTATATCC+AGG | 0.466653 | 7_4:-63186446 | Msa1170100:CDS |
TTTGCAATGATAGATATGAT+AGG | 0.466727 | 7_4:+63187947 | None:intergenic |
CTCATCAGCTCCCATCCTTA+GGG | 0.467690 | 7_4:-63186145 | Msa1170100:CDS |
TATAGGTCGACCATCTCTTC+AGG | 0.471785 | 7_4:-63188027 | Msa1170100:intron |
TGCTACGAGAGGCATTATAT+GGG | 0.472893 | 7_4:+63187007 | None:intergenic |
TTCGAGATGATGCTGTGCTT+GGG | 0.476956 | 7_4:+63188856 | None:intergenic |
TTTATTATAAAGTTTGCGTT+CGG | 0.478832 | 7_4:+63191795 | None:intergenic |
GAACTATAACTGCTATTAGC+CGG | 0.481240 | 7_4:-63187712 | Msa1170100:CDS |
TCAGTCTCATGACTATATCA+TGG | 0.482419 | 7_4:+63189669 | None:intergenic |
TAGTACCAATCAAGAAGATA+GGG | 0.482945 | 7_4:+63186345 | None:intergenic |
ACTGTAAATGTTGAAGGTGT+TGG | 0.484395 | 7_4:-63187224 | Msa1170100:CDS |
GAGATCGAATTGTCTAATTA+CGG | 0.486113 | 7_4:-63190358 | Msa1170100:CDS |
TCTACGGAGTGGACAAGCTC+AGG | 0.488656 | 7_4:-63186049 | Msa1170100:CDS |
GATGTTCCATTAGAACCATA+TGG | 0.488783 | 7_4:-63186291 | Msa1170100:CDS |
ATGAAATTCAAACTATGCCC+TGG | 0.493235 | 7_4:-63189763 | Msa1170100:CDS |
CTGTAAATGTTGAAGGTGTT+GGG | 0.496375 | 7_4:-63187223 | Msa1170100:CDS |
AAACGATATTGTGCTCCATC+AGG | 0.497164 | 7_4:+63189545 | None:intergenic |
CCAATGGCTTCGGGTTGCGT+GGG | 0.500174 | 7_4:+63186086 | None:intergenic |
ATGATAGATATGATAGGTGT+AGG | 0.502443 | 7_4:+63187953 | None:intergenic |
AGGACCCCAGCAAAATAGTC+TGG | 0.502578 | 7_4:-63185550 | Msa1170100:three_prime_UTR |
AAATGAGTATCACGAGGATC+GGG | 0.504809 | 7_4:-63186190 | Msa1170100:CDS |
TAATTAGACAATTCGATCTC+CGG | 0.512269 | 7_4:+63190361 | None:intergenic |
ATTCCTTGTCATATTCATGC+TGG | 0.512407 | 7_4:-63188919 | Msa1170100:CDS |
CATATACACTTTCTCCATTG+AGG | 0.512728 | 7_4:+63190296 | None:intergenic |
GATTTCACTGTAAATGTTGA+AGG | 0.515835 | 7_4:-63187230 | Msa1170100:CDS |
ATCATGGGAACCAAATACTC+AGG | 0.518116 | 7_4:-63186592 | Msa1170100:CDS |
ACTACTGTGAGAAAGGGTTA+TGG | 0.518635 | 7_4:-63190225 | Msa1170100:CDS |
TATGAACCTCAGCTTGATGT+TGG | 0.519250 | 7_4:-63185615 | Msa1170100:three_prime_UTR |
AGGGGTAGTCCCAATACGGC+AGG | 0.521250 | 7_4:-63186477 | Msa1170100:CDS |
CAAATGAGTATCACGAGGAT+CGG | 0.521885 | 7_4:-63186191 | Msa1170100:CDS |
AATGATGTTACTTGAGGAGA+TGG | 0.523349 | 7_4:-63187410 | Msa1170100:CDS |
TATGGTGTATTGTTACAAAG+TGG | 0.525702 | 7_4:-63190207 | Msa1170100:CDS |
GGAAGGCATCGAATAGTCTC+TGG | 0.526974 | 7_4:+63186251 | None:intergenic |
ACCATAGATATTGTTCCCTC+GGG | 0.527633 | 7_4:+63187656 | None:intergenic |
GTCAACGCCAAAGTCCCAAA+GGG | 0.527737 | 7_4:+63190860 | None:intergenic |
GCACAGCATCATCTCGAAGA+TGG | 0.528098 | 7_4:-63188851 | Msa1170100:CDS |
ATGGTTACTACTGTGAGAAA+GGG | 0.529048 | 7_4:-63190231 | Msa1170100:CDS |
TAGCTTTGGTAAGTGTGAGT+GGG | 0.530753 | 7_4:+63190017 | None:intergenic |
GAAGATGGTCAAACTTGTCT+AGG | 0.533585 | 7_4:-63188836 | Msa1170100:CDS |
AGCATGAATATGACAAGGAA+TGG | 0.534278 | 7_4:+63188921 | None:intergenic |
TCATTCTGTGTCAAGTTGGA+AGG | 0.535353 | 7_4:+63186234 | None:intergenic |
TGTTCACAGACACTAATAGT+AGG | 0.535903 | 7_4:+63190483 | None:intergenic |
ACTTCTGTTTATTGTCCCAA+AGG | 0.536240 | 7_4:-63187362 | Msa1170100:intron |
CCTAAGGATGGGAGCTGATG+AGG | 0.537502 | 7_4:+63186146 | None:intergenic |
TCAGAGTAGTTATCCATCAT+GGG | 0.539771 | 7_4:-63186607 | Msa1170100:CDS |
CTATTATTGTTGGATACTTG+GGG | 0.540123 | 7_4:-63189997 | Msa1170100:CDS |
TCCATGCTCTTGAAAATCAA+AGG | 0.540684 | 7_4:+63187047 | None:intergenic |
AACTATAACTGCTATTAGCC+GGG | 0.542388 | 7_4:-63187711 | Msa1170100:CDS |
ACTAAAGCTCTCCCTAAGGA+TGG | 0.543023 | 7_4:+63186134 | None:intergenic |
ATAGGGGTGATTATTCTGGT+TGG | 0.544484 | 7_4:+63186362 | None:intergenic |
AAAGTTCAATCTAGTCCTGA+TGG | 0.544493 | 7_4:-63189560 | Msa1170100:CDS |
TAATCCGATGCCTGAAGAGA+TGG | 0.549224 | 7_4:+63188017 | None:intergenic |
CTCGAGGAGTCTCTGCTAGA+GGG | 0.550555 | 7_4:-63187869 | Msa1170100:CDS |
TTGTTCTCGTTCAAAATACT+CGG | 0.551966 | 7_4:-63189721 | Msa1170100:CDS |
TCTCGAGGAGTCTCTGCTAG+AGG | 0.552554 | 7_4:-63187870 | Msa1170100:CDS |
CTAAAAGCACCGGAACCACT+TGG | 0.553267 | 7_4:+63190448 | None:intergenic |
GTTCGGAAGGAGATGAGCAT+AGG | 0.553415 | 7_4:+63191812 | None:intergenic |
GCTTCTTTGCCAAGATCACA+GGG | 0.553864 | 7_4:+63190061 | None:intergenic |
ACGCAACCCGAAGCCATTGG+TGG | 0.555348 | 7_4:-63186083 | Msa1170100:CDS |
GTGGAGGGGTAGTCCCAATA+CGG | 0.557059 | 7_4:-63186481 | Msa1170100:CDS |
GGGTAGTCCCAATACGGCAG+GGG | 0.557263 | 7_4:-63186475 | Msa1170100:CDS |
TTATAAAGTTTGCGTTCGGA+AGG | 0.557342 | 7_4:+63191799 | None:intergenic |
ATGACAGATGACTTAGAGGC+AGG | 0.558731 | 7_4:-63185883 | Msa1170100:CDS |
TGCTGGCATATCTCTTTCTG+AGG | 0.559787 | 7_4:-63188902 | Msa1170100:CDS |
TCGTAGCAGAAGGAGTTCAC+AGG | 0.560103 | 7_4:-63186992 | Msa1170100:CDS |
TTAGTTGAGCAAAGAATCGC+AGG | 0.562238 | 7_4:+63189945 | None:intergenic |
TCGACCATCTCTTCAGGCAT+CGG | 0.562994 | 7_4:-63188021 | Msa1170100:CDS |
GGCGCGTCATCTTTGACTAG+AGG | 0.563241 | 7_4:-63190403 | Msa1170100:CDS |
GGGCTCCGTAATGCAAAATG+TGG | 0.563493 | 7_4:-63190112 | Msa1170100:CDS |
TTGTTGAACTTCTAAGTCTG+GGG | 0.566155 | 7_4:-63190183 | Msa1170100:CDS |
AGTGCTGTATGGCATTTCCC+TGG | 0.566226 | 7_4:+63186428 | None:intergenic |
TACGGAAGGATCCCAAGTCC+AGG | 0.566589 | 7_4:-63190340 | Msa1170100:CDS |
CTTAATTGGAATGCTCAACA+AGG | 0.567745 | 7_4:-63189630 | Msa1170100:CDS |
TATCATTGCAGATATTTGGT+CGG | 0.568586 | 7_4:-63187763 | Msa1170100:intron |
CAGAAACAGGTTTATATCCA+GGG | 0.569124 | 7_4:-63186445 | Msa1170100:CDS |
TTCCCCTCCTAGAATGTGGA+GGG | 0.569698 | 7_4:-63186496 | Msa1170100:CDS |
TTTCCAAATAACAATTAGAG+AGG | 0.570237 | 7_4:+63185687 | None:intergenic |
ACCGATCAAACATGCTATGT+AGG | 0.571866 | 7_4:+63189480 | None:intergenic |
CAGAATTGCAGCAAAGCCAC+CGG | 0.573817 | 7_4:+63187907 | None:intergenic |
TTTGAATATACTAAAAGCAC+CGG | 0.574468 | 7_4:+63190438 | None:intergenic |
TTTACTTCATGATGATTCGC+CGG | 0.574817 | 7_4:-63190380 | Msa1170100:CDS |
TCCTACATAGCATGTTTGAT+CGG | 0.578136 | 7_4:-63189481 | Msa1170100:intron |
CTCCATTGAGGAAATCTGAA+GGG | 0.578699 | 7_4:+63190308 | None:intergenic |
TCTCCATTGAGGAAATCTGA+AGG | 0.580109 | 7_4:+63190307 | None:intergenic |
AGCTTTGGTAAGTGTGAGTG+GGG | 0.580159 | 7_4:+63190018 | None:intergenic |
TTGCTTTCCCCATTTCACAA+TGG | 0.581632 | 7_4:-63189601 | Msa1170100:CDS |
GGGGTAGTCCCAATACGGCA+GGG | 0.581900 | 7_4:-63186476 | Msa1170100:CDS |
CCATTCCCCAAAGACCAAAA+CGG | 0.583103 | 7_4:+63190520 | None:intergenic |
CGCAACCCGAAGCCATTGGT+GGG | 0.583279 | 7_4:-63186082 | Msa1170100:CDS |
CCAGTTGCAAAAGTGCTGTA+TGG | 0.583969 | 7_4:+63186417 | None:intergenic |
AGATGATGAAACAGTAGCGA+AGG | 0.584404 | 7_4:+63191635 | None:intergenic |
GTTTGGTCATTGAAATCTGG+AGG | 0.584448 | 7_4:+63186012 | None:intergenic |
CACATTATATGCCAAAGAGA+TGG | 0.585314 | 7_4:-63187622 | Msa1170100:CDS |
GAGCGGAAGTTATCAGTACA+TGG | 0.585425 | 7_4:-63186534 | Msa1170100:CDS |
TTCCAAATAACAATTAGAGA+GGG | 0.588455 | 7_4:+63185688 | None:intergenic |
GATGAAACAGTAGCGAAGGA+AGG | 0.589559 | 7_4:+63191639 | None:intergenic |
TCCTTACATCTGAAAATGGA+AGG | 0.591128 | 7_4:+63185569 | None:intergenic |
TCGGAAACTATGTGTGCTGA+AGG | 0.593556 | 7_4:-63189702 | Msa1170100:CDS |
CTAAAGCTCTCCCTAAGGAT+GGG | 0.595120 | 7_4:+63186135 | None:intergenic |
GGGTTCATTCTGTGTCAAGT+TGG | 0.595429 | 7_4:+63186230 | None:intergenic |
CCTGACTAAAGCTCTCCCTA+AGG | 0.596692 | 7_4:+63186130 | None:intergenic |
TGAAATTCAAACTATGCCCT+GGG | 0.597379 | 7_4:-63189762 | Msa1170100:CDS |
TCGGGCTGCATCTCAACTTG+GGG | 0.597814 | 7_4:-63186172 | Msa1170100:CDS |
CAGTCTCATGACTATATCAT+GGG | 0.597885 | 7_4:+63189670 | None:intergenic |
GACGACTTCTAGCCCACCAA+TGG | 0.598590 | 7_4:+63186070 | None:intergenic |
GGTGGGCTAGAAGTCGTCTA+CGG | 0.600262 | 7_4:-63186065 | Msa1170100:CDS |
ATAGCTTTGGTAAGTGTGAG+TGG | 0.602946 | 7_4:+63190016 | None:intergenic |
CCAATTTAAAGTCCATTCAA+GGG | 0.603846 | 7_4:+63189508 | None:intergenic |
CCGTAATGCAAAATGTGGGA+TGG | 0.604122 | 7_4:-63190107 | Msa1170100:CDS |
ACCCCTCCACATTCTAGGAG+GGG | 0.604562 | 7_4:+63186494 | None:intergenic |
GCTCATCTGCAATTGCAGCC+CGG | 0.605056 | 7_4:+63187693 | None:intergenic |
TGTCAACGCCAAAGTCCCAA+AGG | 0.605903 | 7_4:+63190859 | None:intergenic |
TTTATAGTGGGAGTTTCTGG+AGG | 0.606997 | 7_4:+63185823 | None:intergenic |
CTTCCCCTCCTAGAATGTGG+AGG | 0.608862 | 7_4:-63186497 | Msa1170100:CDS |
TCATGGGAACCAAATACTCA+GGG | 0.611108 | 7_4:-63186591 | Msa1170100:CDS |
TAAGTTCCAACATCAAGCTG+AGG | 0.612971 | 7_4:+63185609 | None:intergenic |
CATCTTCCCCTCCTAGAATG+TGG | 0.614729 | 7_4:-63186500 | Msa1170100:CDS |
TACCCCTCCACATTCTAGGA+GGG | 0.614814 | 7_4:+63186493 | None:intergenic |
AGAGAGGGACAATCATGACT+TGG | 0.617793 | 7_4:+63185703 | None:intergenic |
ACAGAAGTAAATATGGAGTG+AGG | 0.618250 | 7_4:+63187377 | None:intergenic |
AGATGGAGAAATCATTGTTG+AGG | 0.619203 | 7_4:-63186966 | Msa1170100:intron |
TACAGCAATGATGTTACTTG+AGG | 0.621146 | 7_4:-63187416 | Msa1170100:CDS |
TCTCTTGAAGCTGCATCATG+AGG | 0.621641 | 7_4:+63186312 | None:intergenic |
GCAATCACTTGGATTCGTTG+TGG | 0.621682 | 7_4:-63186395 | Msa1170100:CDS |
ATATTCAAATGGAAACAGAA+AGG | 0.623281 | 7_4:-63190424 | Msa1170100:CDS |
CGTAGCAGAAGGAGTTCACA+GGG | 0.625758 | 7_4:-63186991 | Msa1170100:CDS |
ATCTTAGAACATTCAGAGAG+CGG | 0.626044 | 7_4:-63186551 | Msa1170100:CDS |
CGAGGGAACAATATCTATGG+TGG | 0.626273 | 7_4:-63187654 | Msa1170100:CDS |
TCGAATTGTCTAATTACGGA+AGG | 0.628393 | 7_4:-63190354 | Msa1170100:CDS |
TATATAGATTCATTGGTGTG+AGG | 0.629591 | 7_4:-63185649 | Msa1170100:three_prime_UTR |
CTACCCCTCCACATTCTAGG+AGG | 0.629863 | 7_4:+63186492 | None:intergenic |
ATAATGCCTCTCGTAGCAGA+AGG | 0.629914 | 7_4:-63187002 | Msa1170100:CDS |
GCAGTGCTGGAATTTATAGT+GGG | 0.639720 | 7_4:+63185811 | None:intergenic |
GCTTCTGGTCTTAGATCCCG+AGG | 0.643614 | 7_4:-63187672 | Msa1170100:CDS |
AGTCATGAGACTGATGCGGA+AGG | 0.646846 | 7_4:-63189660 | Msa1170100:CDS |
GATGGTCAAACTTGTCTAGG+TGG | 0.647207 | 7_4:-63188833 | Msa1170100:CDS |
CTGGAAACCATTGTGAAATG+GGG | 0.649696 | 7_4:+63189594 | None:intergenic |
TCCCCTCCTAGAATGTGGAG+GGG | 0.656107 | 7_4:-63186495 | Msa1170100:CDS |
GCTAGAAGTCGTCTACGGAG+TGG | 0.667710 | 7_4:-63186060 | Msa1170100:CDS |
AGACCAAAACGGTTATAACA+AGG | 0.668823 | 7_4:+63190531 | None:intergenic |
TATATGCCAAAGAGATGGCG+TGG | 0.670967 | 7_4:-63187617 | Msa1170100:CDS |
TTAATTGGAATGCTCAACAA+GGG | 0.673370 | 7_4:-63189629 | Msa1170100:CDS |
ACAATGTTTAGCAGACCAAG+TGG | 0.673800 | 7_4:-63190463 | Msa1170100:CDS |
TGGCAAAGAAATTACTGACG+TGG | 0.676549 | 7_4:-63187597 | Msa1170100:CDS |
ATATAGTCATGAGACTGATG+CGG | 0.679190 | 7_4:-63189664 | Msa1170100:CDS |
GGCTCCGTAATGCAAAATGT+GGG | 0.679327 | 7_4:-63190111 | Msa1170100:CDS |
AGTACCAATCAAGAAGATAG+GGG | 0.679475 | 7_4:+63186346 | None:intergenic |
CTTCTGGTCTTAGATCCCGA+GGG | 0.679702 | 7_4:-63187671 | Msa1170100:CDS |
TGAACTCCTTCTGCTACGAG+AGG | 0.680258 | 7_4:+63186996 | None:intergenic |
GCTACGAGAGGCATTATATG+GGG | 0.685648 | 7_4:+63187008 | None:intergenic |
ATGCCAGCATGAATATGACA+AGG | 0.687544 | 7_4:+63188916 | None:intergenic |
TCAACGCCAAAGTCCCAAAG+GGG | 0.699074 | 7_4:+63190861 | None:intergenic |
ATAAGGTTTCAAATTCAATG+CGG | 0.726994 | 7_4:+63187573 | None:intergenic |
ATACTCAAATGAGTATCACG+AGG | 0.745566 | 7_4:-63186196 | Msa1170100:CDS |
CATGGGAACCAAATACTCAG+GGG | 0.758921 | 7_4:-63186590 | Msa1170100:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTTTATTGGAAAATTTA+TGG | - | chr7_4:63188943-63188962 | Msa1170100:CDS | 10.0% |
!!! | TGATAATTTTTTTTTAGTAT+AGG | - | chr7_4:63188986-63189005 | Msa1170100:CDS | 10.0% |
!! | TGTAAATAAATAACAAATAA+CGG | + | chr7_4:63189923-63189942 | None:intergenic | 10.0% |
!! | TAAAATTCAAAACATATATA+TGG | + | chr7_4:63190545-63190564 | None:intergenic | 10.0% |
!!! | TTTTTTATACTTTTGTGAAA+TGG | - | chr7_4:63186489-63186508 | Msa1170100:CDS | 15.0% |
!!! | TTATTTTTCTGTTGTTTATT+TGG | - | chr7_4:63186755-63186774 | Msa1170100:intron | 15.0% |
!!! | TATTTTTCTGTTGTTTATTT+GGG | - | chr7_4:63186756-63186775 | Msa1170100:intron | 15.0% |
!! | GTAAGATTCTAATATTAATT+TGG | - | chr7_4:63186847-63186866 | Msa1170100:intron | 15.0% |
!!! | TTTTTTTACTATATGTTGAT+TGG | - | chr7_4:63187277-63187296 | Msa1170100:intron | 15.0% |
!! | ACACATTATTAAATATTAAC+AGG | + | chr7_4:63188021-63188040 | None:intergenic | 15.0% |
!!! | CTATTCATGAAAATTTTTAT+TGG | - | chr7_4:63188932-63188951 | Msa1170100:CDS | 15.0% |
!! | ATTTATGGAAATTACAATAA+AGG | - | chr7_4:63188958-63188977 | Msa1170100:CDS | 15.0% |
!! | TATTTATTTACACATAGAAT+AGG | - | chr7_4:63189931-63189950 | Msa1170100:CDS | 15.0% |
!! | CAAAATATTCATAATAGTAA+TGG | + | chr7_4:63190577-63190596 | None:intergenic | 15.0% |
!!! | TCCAAAAAAAATTATTTTAC+TGG | + | chr7_4:63190732-63190751 | None:intergenic | 15.0% |
!! | AATTAAACGAAAATACATAT+AGG | + | chr7_4:63190764-63190783 | None:intergenic | 15.0% |
!! | TTTATTATAAAGTTTGCGTT+CGG | + | chr7_4:63185623-63185642 | None:intergenic | 20.0% |
!! | TCATTGATATTCATATGATA+TGG | + | chr7_4:63185855-63185874 | None:intergenic | 20.0% |
!! | CATATGAATATCAATGATTT+CGG | - | chr7_4:63185858-63185877 | Msa1170100:CDS | 20.0% |
!!! | TAACTGAATTTGTTCTTTTT+TGG | - | chr7_4:63186160-63186179 | Msa1170100:CDS | 20.0% |
!! | TATACAAATACAATGATCTT+TGG | - | chr7_4:63186217-63186236 | Msa1170100:CDS | 20.0% |
!!! | TTGATTATTTTTGAACACTT+AGG | - | chr7_4:63186436-63186455 | Msa1170100:CDS | 20.0% |
!! | ATTTCACAAAATGGTTAAAA+GGG | + | chr7_4:63188082-63188101 | None:intergenic | 20.0% |
!!! | TTTTAACCATTTTGTGAAAT+CGG | - | chr7_4:63188082-63188101 | Msa1170100:intron | 20.0% |
!! | ATAAATTGCATCCTTATATA+AGG | + | chr7_4:63188158-63188177 | None:intergenic | 20.0% |
!! | TTTCAAATTTCATGTTATTC+TGG | - | chr7_4:63188199-63188218 | Msa1170100:intron | 20.0% |
!! | AATTTCATAGTTAGTTGTAT+AGG | - | chr7_4:63188231-63188250 | Msa1170100:intron | 20.0% |
!!! | GTTTATTTTCAGTACATAAT+TGG | - | chr7_4:63188774-63188793 | Msa1170100:intron | 20.0% |
!!! | TTATCAATAACTTGTGTTAT+AGG | - | chr7_4:63189371-63189390 | Msa1170100:intron | 20.0% |
!!! | AAATTCATATCTTTTGTATC+CGG | - | chr7_4:63189489-63189508 | Msa1170100:CDS | 20.0% |
!! | AAAATATCATTGCAGATATT+TGG | - | chr7_4:63189648-63189667 | Msa1170100:CDS | 20.0% |
!! | ACAATAAACAGAAGTAAATA+TGG | + | chr7_4:63190048-63190067 | None:intergenic | 20.0% |
!! | TACTTGGAGATTTATTTATA+TGG | - | chr7_4:63190085-63190104 | Msa1170100:CDS | 20.0% |
!!! | GCCAGTAAAATAATTTTTTT+TGG | - | chr7_4:63190728-63190747 | Msa1170100:intron | 20.0% |
!! | CATGATAATTATATGTTGTT+TGG | + | chr7_4:63191423-63191442 | None:intergenic | 20.0% |
!! | AAACTCTTTTCTTTACTTCA+AGG | - | chr7_4:63185805-63185824 | Msa1170100:CDS | 25.0% |
! | CATATGATATGGAAAAGAAA+GGG | + | chr7_4:63185844-63185863 | None:intergenic | 25.0% |
! | TCATATGATATGGAAAAGAA+AGG | + | chr7_4:63185845-63185864 | None:intergenic | 25.0% |
! | CAACTATCTTAACTATTCAT+TGG | + | chr7_4:63186310-63186329 | None:intergenic | 25.0% |
! | AGTTAAGATAGTTGAAAATG+CGG | - | chr7_4:63186316-63186335 | Msa1170100:CDS | 25.0% |
!! | ACATTTGAAGATGATGTTTT+AGG | - | chr7_4:63186522-63186541 | Msa1170100:CDS | 25.0% |
!! | TTTGAATATACTAAAAGCAC+CGG | + | chr7_4:63186980-63186999 | None:intergenic | 25.0% |
!! | GTGCTTTTAGTATATTCAAA+TGG | - | chr7_4:63186980-63186999 | Msa1170100:CDS | 25.0% |
! | ATATTCAAATGGAAACAGAA+AGG | - | chr7_4:63186991-63187010 | Msa1170100:CDS | 25.0% |
!! | AAAAAATCCTGAAAAGCATA+TGG | + | chr7_4:63187262-63187281 | None:intergenic | 25.0% |
!! | TTACTATATGTTGATTGGAA+TGG | - | chr7_4:63187282-63187301 | Msa1170100:intron | 25.0% |
!! | TACTATATGTTGATTGGAAT+GGG | - | chr7_4:63187283-63187302 | Msa1170100:intron | 25.0% |
! | TAAACAACTAAAATGCATTG+AGG | - | chr7_4:63187552-63187571 | Msa1170100:intron | 25.0% |
!! | AACAACTTTGTCAACAATTT+TGG | + | chr7_4:63187679-63187698 | None:intergenic | 25.0% |
!! | GTATGAATTATTGTCTTTTG+AGG | - | chr7_4:63188039-63188058 | Msa1170100:intron | 25.0% |
! | AAATGGTTAAAAGGGAAAAT+TGG | + | chr7_4:63188074-63188093 | None:intergenic | 25.0% |
! | GATTTCACAAAATGGTTAAA+AGG | + | chr7_4:63188083-63188102 | None:intergenic | 25.0% |
! | ATAAGGATGCAATTTATATC+TGG | - | chr7_4:63188161-63188180 | Msa1170100:intron | 25.0% |
!! | AGGTATCATATTCATTTTCT+TGG | - | chr7_4:63188624-63188643 | Msa1170100:intron | 25.0% |
! | GAAGAGAAAATGAAAGAAAA+TGG | + | chr7_4:63188654-63188673 | None:intergenic | 25.0% |
! | AACTGAATAAAATATGCACT+TGG | + | chr7_4:63188757-63188776 | None:intergenic | 25.0% |
! | AACTTCAAATCTTTCTTTCA+TGG | + | chr7_4:63188904-63188923 | None:intergenic | 25.0% |
!!! | CTTGCATATTTTTTTGAAAC+AGG | - | chr7_4:63189106-63189125 | Msa1170100:intron | 25.0% |
! | TGTAACATAGTTATTTGACT+TGG | - | chr7_4:63189164-63189183 | Msa1170100:intron | 25.0% |
!! | TAATTCTAAAAACGATAACC+AGG | + | chr7_4:63189316-63189335 | None:intergenic | 25.0% |
! | TTTGCAATGATAGATATGAT+AGG | + | chr7_4:63189471-63189490 | None:intergenic | 25.0% |
! | ATAAGGTTTCAAATTCAATG+CGG | + | chr7_4:63189845-63189864 | None:intergenic | 25.0% |
!! | CATAATGTGAATGTATTGAT+CGG | + | chr7_4:63189891-63189910 | None:intergenic | 25.0% |
! | TTCAACATTTACAGTGAAAT+CGG | + | chr7_4:63190186-63190205 | None:intergenic | 25.0% |
! | CTCATAAGACAAAATTCATT+AGG | - | chr7_4:63190496-63190515 | Msa1170100:five_prime_UTR | 25.0% |
! | TAAGACAAAATTCATTAGGA+AGG | - | chr7_4:63190500-63190519 | Msa1170100:five_prime_UTR | 25.0% |
!!! | GTGCATGCTTTTTAATTTTT+TGG | - | chr7_4:63190609-63190628 | Msa1170100:intron | 25.0% |
! | TTTGAGTATTCTTCATAGTT+GGG | + | chr7_4:63191208-63191227 | None:intergenic | 25.0% |
! | ATTTGAGTATTCTTCATAGT+TGG | + | chr7_4:63191209-63191228 | None:intergenic | 25.0% |
!! | GGAGAATTTAATCTACATTT+TGG | - | chr7_4:63191553-63191572 | Msa1170100:intron | 25.0% |
! | TTCCAAATAACAATTAGAGA+GGG | + | chr7_4:63191730-63191749 | None:intergenic | 25.0% |
! | TTTCCAAATAACAATTAGAG+AGG | + | chr7_4:63191731-63191750 | None:intergenic | 25.0% |
!! | TTTGCTGTATATAGATTCAT+TGG | - | chr7_4:63191759-63191778 | Msa1170100:five_prime_UTR | 25.0% |
!! | GATTTTTGTTTATAGTTGCG+TGG | + | chr7_4:63185714-63185733 | None:intergenic | 30.0% |
! | GTTTGCATATTTTGTAACGT+TGG | - | chr7_4:63186015-63186034 | Msa1170100:CDS | 30.0% |
!!! | CTTTTTTGGTCTGACATTTA+TGG | - | chr7_4:63186174-63186193 | Msa1170100:CDS | 30.0% |
TGGAGCAATTATCATAACAT+GGG | + | chr7_4:63186368-63186387 | None:intergenic | 30.0% | |
ATGGAGCAATTATCATAACA+TGG | + | chr7_4:63186369-63186388 | None:intergenic | 30.0% | |
TGTTATGATAATTGCTCCAT+TGG | - | chr7_4:63186369-63186388 | Msa1170100:CDS | 30.0% | |
GTTATGATAATTGCTCCATT+GGG | - | chr7_4:63186370-63186389 | Msa1170100:CDS | 30.0% | |
ACAAATACACATTGCCAATT+TGG | + | chr7_4:63186401-63186420 | None:intergenic | 30.0% | |
AAAGTTTGAGAGAGAAAGTT+AGG | + | chr7_4:63186466-63186485 | None:intergenic | 30.0% | |
TCATTAACTGGTAGAAATCT+TGG | - | chr7_4:63186617-63186636 | Msa1170100:intron | 30.0% | |
GAAAAATAAAAGCGAAGACA+AGG | + | chr7_4:63186744-63186763 | None:intergenic | 30.0% | |
TTGCAAATTGCATTCCTATT+TGG | + | chr7_4:63186785-63186804 | None:intergenic | 30.0% | |
!! | TTATAACCGTTTTGGTCTTT+GGG | - | chr7_4:63186889-63186908 | Msa1170100:intron | 30.0% |
TAATTAGACAATTCGATCTC+CGG | + | chr7_4:63187057-63187076 | None:intergenic | 30.0% | |
GAGATCGAATTGTCTAATTA+CGG | - | chr7_4:63187057-63187076 | Msa1170100:CDS | 30.0% | |
! | CTCTTCTTTGAAAGACTTTA+TGG | - | chr7_4:63187165-63187184 | Msa1170100:intron | 30.0% |
TATGGTGTATTGTTACAAAG+TGG | - | chr7_4:63187208-63187227 | Msa1170100:intron | 30.0% | |
ATTGTTGAACTTCTAAGTCT+GGG | - | chr7_4:63187231-63187250 | Msa1170100:CDS | 30.0% | |
CTTACCAAAGCTATTATTGT+TGG | - | chr7_4:63187408-63187427 | Msa1170100:CDS | 30.0% | |
GTATCCAACAATAATAGCTT+TGG | + | chr7_4:63187415-63187434 | None:intergenic | 30.0% | |
AGCTATTATTGTTGGATACT+TGG | - | chr7_4:63187416-63187435 | Msa1170100:CDS | 30.0% | |
GCTATTATTGTTGGATACTT+GGG | - | chr7_4:63187417-63187436 | Msa1170100:CDS | 30.0% | |
CTATTATTGTTGGATACTTG+GGG | - | chr7_4:63187418-63187437 | Msa1170100:CDS | 30.0% | |
GAAACAAAACATCCAATAGA+AGG | + | chr7_4:63187451-63187470 | None:intergenic | 30.0% | |
TTGTTCTCGTTCAAAATACT+CGG | - | chr7_4:63187694-63187713 | Msa1170100:CDS | 30.0% | |
TTAATTGGAATGCTCAACAA+GGG | - | chr7_4:63187786-63187805 | Msa1170100:intron | 30.0% | |
! | CCAATTTAAAGTCCATTCAA+GGG | + | chr7_4:63187910-63187929 | None:intergenic | 30.0% |
! | ACCAATTTAAAGTCCATTCA+AGG | + | chr7_4:63187911-63187930 | None:intergenic | 30.0% |
! | AACAAACCGATTTCACAAAA+TGG | + | chr7_4:63188091-63188110 | None:intergenic | 30.0% |
TTGTTTGTTTGAAGGATAGA+AGG | - | chr7_4:63188110-63188129 | Msa1170100:intron | 30.0% | |
ATAGTTAGTTGTATAGGAGT+TGG | - | chr7_4:63188237-63188256 | Msa1170100:intron | 30.0% | |
GATTGACATATGTTGTGATT+TGG | - | chr7_4:63188300-63188319 | Msa1170100:intron | 30.0% | |
ATCCAAAGACATTACAGAAA+AGG | - | chr7_4:63188435-63188454 | Msa1170100:intron | 30.0% | |
!! | GATTTTTAGGGAATACAATG+AGG | - | chr7_4:63188604-63188623 | Msa1170100:intron | 30.0% |
!! | ACATAGTATAGAAGTGTCTA+TGG | + | chr7_4:63188728-63188747 | None:intergenic | 30.0% |
AGTTATCCAAAAACCTTTGA+TGG | - | chr7_4:63188812-63188831 | Msa1170100:CDS | 30.0% | |
TTATATACACAACCACTGAT+GGG | + | chr7_4:63188841-63188860 | None:intergenic | 30.0% | |
ATTATATACACAACCACTGA+TGG | + | chr7_4:63188842-63188861 | None:intergenic | 30.0% | |
CATGCATTCTCTGTTAATAT+CGG | - | chr7_4:63188867-63188886 | Msa1170100:CDS | 30.0% | |
ATTTATGAGTGACCACATTA+TGG | - | chr7_4:63189049-63189068 | Msa1170100:intron | 30.0% | |
ACTAGAATAACACCATAATG+TGG | + | chr7_4:63189064-63189083 | None:intergenic | 30.0% | |
CTTTCAAACAACATAAATGC+TGG | + | chr7_4:63189190-63189209 | None:intergenic | 30.0% | |
! | GCTATTGTTTGGTAGTATAA+AGG | + | chr7_4:63189216-63189235 | None:intergenic | 30.0% |
CACAAGTTATTGATAAGCTT+TGG | + | chr7_4:63189367-63189386 | None:intergenic | 30.0% | |
ATGATAGATATGATAGGTGT+AGG | + | chr7_4:63189465-63189484 | None:intergenic | 30.0% | |
ATCAACAGAAGTTCATTACA+TGG | + | chr7_4:63189572-63189591 | None:intergenic | 30.0% | |
TATCATTGCAGATATTTGGT+CGG | - | chr7_4:63189652-63189671 | Msa1170100:CDS | 30.0% | |
! | TGAATTTGAAACCTTATTCC+AGG | - | chr7_4:63189848-63189867 | Msa1170100:intron | 30.0% |
! | TGCTCATGTTTTTCTTTGTA+TGG | - | chr7_4:63189969-63189988 | Msa1170100:CDS | 30.0% |
GATTTCACTGTAAATGTTGA+AGG | - | chr7_4:63190185-63190204 | Msa1170100:CDS | 30.0% | |
! | ATATTTTCTGCCATAAGCTA+TGG | + | chr7_4:63190312-63190331 | None:intergenic | 30.0% |
ACAATGTTTATACTCTCAGT+TGG | - | chr7_4:63190648-63190667 | Msa1170100:intron | 30.0% | |
TAGTACCAATCAAGAAGATA+GGG | + | chr7_4:63191073-63191092 | None:intergenic | 30.0% | |
!! | GTTATTCCATATGGTTCTAA+TGG | + | chr7_4:63191133-63191152 | None:intergenic | 30.0% |
TAACGTTCTGTTATTCCATA+TGG | + | chr7_4:63191142-63191161 | None:intergenic | 30.0% | |
! | ATGACAAGTTTTCTGATAGA+GGG | - | chr7_4:63191440-63191459 | Msa1170100:intron | 30.0% |
AAACAAAAAATGTGGGAAAG+GGG | + | chr7_4:63191655-63191674 | None:intergenic | 30.0% | |
CAAACAAAAAATGTGGGAAA+GGG | + | chr7_4:63191656-63191675 | None:intergenic | 30.0% | |
TATATAGATTCATTGGTGTG+AGG | - | chr7_4:63191766-63191785 | Msa1170100:five_prime_UTR | 30.0% | |
TTATAAAGTTTGCGTTCGGA+AGG | + | chr7_4:63185619-63185638 | None:intergenic | 35.0% | |
! | TTTGCACAGAAATTTTGCCT+CGG | + | chr7_4:63186259-63186278 | None:intergenic | 35.0% |
! | ACAACTTTTCTCTCATGATC+AGG | - | chr7_4:63186586-63186605 | Msa1170100:CDS | 35.0% |
! | TTTTCTCTCATGATCAGGTA+TGG | - | chr7_4:63186591-63186610 | Msa1170100:CDS | 35.0% |
! | CAGGTATGGTTTTCATTAAC+TGG | - | chr7_4:63186605-63186624 | Msa1170100:CDS | 35.0% |
!! | GTTTATTTGGGTTGCCAAAT+AGG | - | chr7_4:63186768-63186787 | Msa1170100:intron | 35.0% |
!! | GAACCTTGTTATAACCGTTT+TGG | - | chr7_4:63186881-63186900 | Msa1170100:intron | 35.0% |
AGACCAAAACGGTTATAACA+AGG | + | chr7_4:63186887-63186906 | None:intergenic | 35.0% | |
!! | GTTATAACCGTTTTGGTCTT+TGG | - | chr7_4:63186888-63186907 | Msa1170100:intron | 35.0% |
!! | TATAACCGTTTTGGTCTTTG+GGG | - | chr7_4:63186890-63186909 | Msa1170100:intron | 35.0% |
TGTTCACAGACACTAATAGT+AGG | + | chr7_4:63186935-63186954 | None:intergenic | 35.0% | |
TTTACTTCATGATGATTCGC+CGG | - | chr7_4:63187035-63187054 | Msa1170100:CDS | 35.0% | |
TCGAATTGTCTAATTACGGA+AGG | - | chr7_4:63187061-63187080 | Msa1170100:intron | 35.0% | |
CATATACACTTTCTCCATTG+AGG | + | chr7_4:63187122-63187141 | None:intergenic | 35.0% | |
! | TGTAGAACCAATTGCTGATT+TGG | - | chr7_4:63187140-63187159 | Msa1170100:intron | 35.0% |
AAGAGATCCAAATCAGCAAT+TGG | + | chr7_4:63187150-63187169 | None:intergenic | 35.0% | |
TATGGTTACTACTGTGAGAA+AGG | - | chr7_4:63187183-63187202 | Msa1170100:intron | 35.0% | |
ATGGTTACTACTGTGAGAAA+GGG | - | chr7_4:63187184-63187203 | Msa1170100:intron | 35.0% | |
GATTGTTGAACTTCTAAGTC+TGG | - | chr7_4:63187230-63187249 | Msa1170100:CDS | 35.0% | |
TTGTTGAACTTCTAAGTCTG+GGG | - | chr7_4:63187232-63187251 | Msa1170100:CDS | 35.0% | |
!!! | TGGGGATTTTTTCCTTCTAT+TGG | - | chr7_4:63187436-63187455 | Msa1170100:intron | 35.0% |
AGACAAAAACATGTGAACTG+TGG | + | chr7_4:63187593-63187612 | None:intergenic | 35.0% | |
ATGAAATTCAAACTATGCCC+TGG | - | chr7_4:63187652-63187671 | Msa1170100:CDS | 35.0% | |
TGAAATTCAAACTATGCCCT+GGG | - | chr7_4:63187653-63187672 | Msa1170100:CDS | 35.0% | |
CAGTCTCATGACTATATCAT+GGG | + | chr7_4:63187748-63187767 | None:intergenic | 35.0% | |
TCAGTCTCATGACTATATCA+TGG | + | chr7_4:63187749-63187768 | None:intergenic | 35.0% | |
ATATAGTCATGAGACTGATG+CGG | - | chr7_4:63187751-63187770 | Msa1170100:CDS | 35.0% | |
CTTAATTGGAATGCTCAACA+AGG | - | chr7_4:63187785-63187804 | Msa1170100:intron | 35.0% | |
TCAGGACTAGATTGAACTTT+CGG | + | chr7_4:63187855-63187874 | None:intergenic | 35.0% | |
AAAGTTCAATCTAGTCCTGA+TGG | - | chr7_4:63187855-63187874 | Msa1170100:intron | 35.0% | |
! | CCCTTGAATGGACTTTAAAT+TGG | - | chr7_4:63187907-63187926 | Msa1170100:CDS | 35.0% |
TCCTACATAGCATGTTTGAT+CGG | - | chr7_4:63187934-63187953 | Msa1170100:CDS | 35.0% | |
CACTCTGATTGTACAACTAA+AGG | + | chr7_4:63187982-63188001 | None:intergenic | 35.0% | |
! | CGGTTTGTTTGTTTGTTTGA+AGG | - | chr7_4:63188102-63188121 | Msa1170100:intron | 35.0% |
! | CATCCTTATATAAGGTACCA+TGG | + | chr7_4:63188150-63188169 | None:intergenic | 35.0% |
GTAGCAAAAGTCATGTTCAA+AGG | + | chr7_4:63188381-63188400 | None:intergenic | 35.0% | |
! | TTGAACATGACTTTTGCTAC+AGG | - | chr7_4:63188381-63188400 | Msa1170100:intron | 35.0% |
! | AGCCTTTTCTGTAATGTCTT+TGG | + | chr7_4:63188440-63188459 | None:intergenic | 35.0% |
GACATTACAGAAAAGGCTTA+TGG | - | chr7_4:63188442-63188461 | Msa1170100:intron | 35.0% | |
AGAAAAGGCTTATGGTAGTT+GGG | - | chr7_4:63188450-63188469 | Msa1170100:intron | 35.0% | |
AGCATGAATATGACAAGGAA+TGG | + | chr7_4:63188497-63188516 | None:intergenic | 35.0% | |
ATTCCTTGTCATATTCATGC+TGG | - | chr7_4:63188496-63188515 | Msa1170100:intron | 35.0% | |
!! | ACTTGTCTAGGTGGATTTTT+AGG | - | chr7_4:63188591-63188610 | Msa1170100:intron | 35.0% |
!! | CTTGTCTAGGTGGATTTTTA+GGG | - | chr7_4:63188592-63188611 | Msa1170100:intron | 35.0% |
!!! | CTTCTCTTTTGTTGCTTTCA+TGG | - | chr7_4:63188670-63188689 | Msa1170100:intron | 35.0% |
TATCCAAAAACCTTTGATGG+AGG | - | chr7_4:63188815-63188834 | Msa1170100:CDS | 35.0% | |
ATTAACAGAGAATGCATGGA+TGG | + | chr7_4:63188865-63188884 | None:intergenic | 35.0% | |
CGATATTAACAGAGAATGCA+TGG | + | chr7_4:63188869-63188888 | None:intergenic | 35.0% | |
TTCTAGTCACCTAGCATTAA+CGG | - | chr7_4:63189077-63189096 | Msa1170100:intron | 35.0% | |
AAGAATAAGCCGTTAATGCT+AGG | + | chr7_4:63189089-63189108 | None:intergenic | 35.0% | |
AATGTCATATGCAACCTACA+TGG | + | chr7_4:63189238-63189257 | None:intergenic | 35.0% | |
! | TTCATATCTTTTGTATCCGG+TGG | - | chr7_4:63189492-63189511 | Msa1170100:CDS | 35.0% |
TTACCGAGTTCATAATGTCA+TGG | - | chr7_4:63189594-63189613 | Msa1170100:CDS | 35.0% | |
!! | TATTTGGTCGGAACTTGTTT+TGG | - | chr7_4:63189664-63189683 | Msa1170100:CDS | 35.0% |
!!! | TTTTGGTATGCTGCTGTTTT+TGG | - | chr7_4:63189681-63189700 | Msa1170100:CDS | 35.0% |
GAACTATAACTGCTATTAGC+CGG | - | chr7_4:63189703-63189722 | Msa1170100:CDS | 35.0% | |
AACTATAACTGCTATTAGCC+GGG | - | chr7_4:63189704-63189723 | Msa1170100:CDS | 35.0% | |
CACATTATATGCCAAAGAGA+TGG | - | chr7_4:63189793-63189812 | Msa1170100:intron | 35.0% | |
AAGAAAAACATGAGCACGAA+AGG | + | chr7_4:63189965-63189984 | None:intergenic | 35.0% | |
! | TACAGCAATGATGTTACTTG+AGG | - | chr7_4:63189999-63190018 | Msa1170100:CDS | 35.0% |
! | AATGATGTTACTTGAGGAGA+TGG | - | chr7_4:63190005-63190024 | Msa1170100:CDS | 35.0% |
ACAGAAGTAAATATGGAGTG+AGG | + | chr7_4:63190041-63190060 | None:intergenic | 35.0% | |
ACTTCTGTTTATTGTCCCAA+AGG | - | chr7_4:63190053-63190072 | Msa1170100:CDS | 35.0% | |
CAAGTACGAAAATGACCTTT+GGG | + | chr7_4:63190071-63190090 | None:intergenic | 35.0% | |
CTGTGAAATGCAGTATACTT+AGG | + | chr7_4:63190111-63190130 | None:intergenic | 35.0% | |
! | ACTGTAAATGTTGAAGGTGT+TGG | - | chr7_4:63190191-63190210 | Msa1170100:CDS | 35.0% |
!! | CTGTAAATGTTGAAGGTGTT+GGG | - | chr7_4:63190192-63190211 | Msa1170100:CDS | 35.0% |
GTACATCTGTAACATTCTCT+AGG | - | chr7_4:63190263-63190282 | Msa1170100:CDS | 35.0% | |
TGTCTCAATTCCATAGCTTA+TGG | - | chr7_4:63190299-63190318 | Msa1170100:CDS | 35.0% | |
!! | ACCTTTGATTTTCAAGAGCA+TGG | - | chr7_4:63190367-63190386 | Msa1170100:CDS | 35.0% |
TCCATGCTCTTGAAAATCAA+AGG | + | chr7_4:63190371-63190390 | None:intergenic | 35.0% | |
AGATGGAGAAATCATTGTTG+AGG | - | chr7_4:63190449-63190468 | Msa1170100:CDS | 35.0% | |
GAGAAATCATTGTTGAGGTA+TGG | - | chr7_4:63190454-63190473 | Msa1170100:CDS | 35.0% | |
TCTGAGAAAAGAGTTGACTA+TGG | + | chr7_4:63190700-63190719 | None:intergenic | 35.0% | |
TTCAGAGTAGTTATCCATCA+TGG | - | chr7_4:63190807-63190826 | Msa1170100:intron | 35.0% | |
TCAGAGTAGTTATCCATCAT+GGG | - | chr7_4:63190808-63190827 | Msa1170100:intron | 35.0% | |
ATCTTAGAACATTCAGAGAG+CGG | - | chr7_4:63190864-63190883 | Msa1170100:five_prime_UTR | 35.0% | |
ACAGAAACAGGTTTATATCC+AGG | - | chr7_4:63190969-63190988 | Msa1170100:intron | 35.0% | |
CAGAAACAGGTTTATATCCA+GGG | - | chr7_4:63190970-63190989 | Msa1170100:intron | 35.0% | |
AGTACCAATCAAGAAGATAG+GGG | + | chr7_4:63191072-63191091 | None:intergenic | 35.0% | |
GTAGTACCAATCAAGAAGAT+AGG | + | chr7_4:63191074-63191093 | None:intergenic | 35.0% | |
GATGTTCCATTAGAACCATA+TGG | - | chr7_4:63191124-63191143 | Msa1170100:intron | 35.0% | |
ATACTCAAATGAGTATCACG+AGG | - | chr7_4:63191219-63191238 | Msa1170100:intron | 35.0% | |
GTTGTTTGGTCATTGAAATC+TGG | + | chr7_4:63191409-63191428 | None:intergenic | 35.0% | |
! | CATGACAAGTTTTCTGATAG+AGG | - | chr7_4:63191439-63191458 | Msa1170100:intron | 35.0% |
! | ACCAAGAACAACACTTTTAC+TGG | - | chr7_4:63191476-63191495 | Msa1170100:intron | 35.0% |
!! | TCCAGTAAAAGTGTTGTTCT+TGG | + | chr7_4:63191480-63191499 | None:intergenic | 35.0% |
AACAATGACAGATGACTTAG+AGG | - | chr7_4:63191528-63191547 | Msa1170100:intron | 35.0% | |
! | GAATTTATAGTGGGAGTTTC+TGG | + | chr7_4:63191598-63191617 | None:intergenic | 35.0% |
CCAAACAAAAAATGTGGGAA+AGG | + | chr7_4:63191657-63191676 | None:intergenic | 35.0% | |
!!! | CCTTTCCCACATTTTTTGTT+TGG | - | chr7_4:63191654-63191673 | Msa1170100:five_prime_UTR | 35.0% |
!!! | TCCCACATTTTTTGTTTGGA+AGG | - | chr7_4:63191658-63191677 | Msa1170100:five_prime_UTR | 35.0% |
CCCTTCCAAACAAAAAATGT+GGG | + | chr7_4:63191662-63191681 | None:intergenic | 35.0% | |
!!! | CCCACATTTTTTGTTTGGAA+GGG | - | chr7_4:63191659-63191678 | Msa1170100:five_prime_UTR | 35.0% |
ACCCTTCCAAACAAAAAATG+TGG | + | chr7_4:63191663-63191682 | None:intergenic | 35.0% | |
!! | GAAGGGTGCTTTCAATTAAA+TGG | - | chr7_4:63191676-63191695 | Msa1170100:five_prime_UTR | 35.0% |
! | GTCCCTCTCTAATTGTTATT+TGG | - | chr7_4:63191725-63191744 | Msa1170100:five_prime_UTR | 35.0% |
TCCTTACATCTGAAAATGGA+AGG | + | chr7_4:63191849-63191868 | None:intergenic | 35.0% | |
! | AGGAGATGAGCATAGGTTTT+TGG | + | chr7_4:63185599-63185618 | None:intergenic | 40.0% |
AGATGATGAAACAGTAGCGA+AGG | + | chr7_4:63185783-63185802 | None:intergenic | 40.0% | |
GAGACACAAATACAGAAACG+TGG | + | chr7_4:63185909-63185928 | None:intergenic | 40.0% | |
GATTATTATCGTTGTCGACG+AGG | + | chr7_4:63186058-63186077 | None:intergenic | 40.0% | |
! | TCCATTGGGTTGTTCCAAAT+TGG | - | chr7_4:63186384-63186403 | Msa1170100:CDS | 40.0% |
CAAATATGGGCAACTTGACA+AGG | + | chr7_4:63186707-63186726 | None:intergenic | 40.0% | |
! | CTTGTCAAGTTGCCCATATT+TGG | - | chr7_4:63186705-63186724 | Msa1170100:intron | 40.0% |
ATGAATCGCCAGCCAAATAT+GGG | + | chr7_4:63186720-63186739 | None:intergenic | 40.0% | |
TATGAATCGCCAGCCAAATA+TGG | + | chr7_4:63186721-63186740 | None:intergenic | 40.0% | |
ACAATGTTTAGCAGACCAAG+TGG | - | chr7_4:63186952-63186971 | Msa1170100:intron | 40.0% | |
CTCCATTGAGGAAATCTGAA+GGG | + | chr7_4:63187110-63187129 | None:intergenic | 40.0% | |
TCTCCATTGAGGAAATCTGA+AGG | + | chr7_4:63187111-63187130 | None:intergenic | 40.0% | |
ACTACTGTGAGAAAGGGTTA+TGG | - | chr7_4:63187190-63187209 | Msa1170100:intron | 40.0% | |
! | CCATCCCACATTTTGCATTA+CGG | + | chr7_4:63187311-63187330 | None:intergenic | 40.0% |
TAAGTGTGAGTGGGGTTAAA+GGG | + | chr7_4:63187392-63187411 | None:intergenic | 40.0% | |
!! | TAGCTTTGGTAAGTGTGAGT+GGG | + | chr7_4:63187401-63187420 | None:intergenic | 40.0% |
!! | ATAGCTTTGGTAAGTGTGAG+TGG | + | chr7_4:63187402-63187421 | None:intergenic | 40.0% |
TTAGTTGAGCAAAGAATCGC+AGG | + | chr7_4:63187473-63187492 | None:intergenic | 40.0% | |
GCGATTCTTTGCTCAACTAA+AGG | - | chr7_4:63187473-63187492 | Msa1170100:intron | 40.0% | |
CTTACCTGCTGTAGAAAAAC+TGG | + | chr7_4:63187515-63187534 | None:intergenic | 40.0% | |
CTAAAATGCATTGAGGCAGT+TGG | - | chr7_4:63187559-63187578 | Msa1170100:intron | 40.0% | |
!! | TTGTCAACAATTTTGGCCCA+GGG | + | chr7_4:63187672-63187691 | None:intergenic | 40.0% |
!! | TTTGTCAACAATTTTGGCCC+AGG | + | chr7_4:63187673-63187692 | None:intergenic | 40.0% |
CGGAAGGAGAACTACTTAAT+TGG | - | chr7_4:63187771-63187790 | Msa1170100:intron | 40.0% | |
TTGCTTTCCCCATTTCACAA+TGG | - | chr7_4:63187814-63187833 | Msa1170100:intron | 40.0% | |
CTGGAAACCATTGTGAAATG+GGG | + | chr7_4:63187824-63187843 | None:intergenic | 40.0% | |
CCTGGAAACCATTGTGAAAT+GGG | + | chr7_4:63187825-63187844 | None:intergenic | 40.0% | |
ACCTGGAAACCATTGTGAAA+TGG | + | chr7_4:63187826-63187845 | None:intergenic | 40.0% | |
CAGGACTAGATTGAACTTTC+GGG | + | chr7_4:63187854-63187873 | None:intergenic | 40.0% | |
AAACGATATTGTGCTCCATC+AGG | + | chr7_4:63187873-63187892 | None:intergenic | 40.0% | |
TACTTACCAAGACCCTTGAA+TGG | - | chr7_4:63187895-63187914 | Msa1170100:CDS | 40.0% | |
TAAAGTCCATTCAAGGGTCT+TGG | + | chr7_4:63187904-63187923 | None:intergenic | 40.0% | |
ACCGATCAAACATGCTATGT+AGG | + | chr7_4:63187938-63187957 | None:intergenic | 40.0% | |
AGGACTATTTAGATGCTCCA+TGG | - | chr7_4:63188130-63188149 | Msa1170100:intron | 40.0% | |
GCTCCATGGTACCTTATATA+AGG | - | chr7_4:63188144-63188163 | Msa1170100:intron | 40.0% | |
! | ACAGGAACTTTTGTGTCAGA+AGG | - | chr7_4:63188399-63188418 | Msa1170100:intron | 40.0% |
! | CAGGAACTTTTGTGTCAGAA+GGG | - | chr7_4:63188400-63188419 | Msa1170100:intron | 40.0% |
CAGAAAAGGCTTATGGTAGT+TGG | - | chr7_4:63188449-63188468 | Msa1170100:intron | 40.0% | |
ATGCCAGCATGAATATGACA+AGG | + | chr7_4:63188502-63188521 | None:intergenic | 40.0% | |
GAAGATGGTCAAACTTGTCT+AGG | - | chr7_4:63188579-63188598 | Msa1170100:intron | 40.0% | |
CTACCAAACAATAGCCATGT+AGG | - | chr7_4:63189221-63189240 | Msa1170100:intron | 40.0% | |
CAACCTACATGGCTATTGTT+TGG | + | chr7_4:63189227-63189246 | None:intergenic | 40.0% | |
TATATGTCTTCTGCTGTACC+TGG | - | chr7_4:63189295-63189314 | Msa1170100:intron | 40.0% | |
CTGCCATGACATTATGAACT+CGG | + | chr7_4:63189600-63189619 | None:intergenic | 40.0% | |
AATGTCATGGCAGTCGTTAA+AGG | - | chr7_4:63189607-63189626 | Msa1170100:CDS | 40.0% | |
ACCATAGATATTGTTCCCTC+GGG | + | chr7_4:63189762-63189781 | None:intergenic | 40.0% | |
CACCATAGATATTGTTCCCT+CGG | + | chr7_4:63189763-63189782 | None:intergenic | 40.0% | |
TGGCAAAGAAATTACTGACG+TGG | - | chr7_4:63189818-63189837 | Msa1170100:intron | 40.0% | |
TTATTCCAGGTATTCTGCCT+GGG | - | chr7_4:63189861-63189880 | Msa1170100:intron | 40.0% | |
CCAAGTACGAAAATGACCTT+TGG | + | chr7_4:63190072-63190091 | None:intergenic | 40.0% | |
!! | CCAAAGGTCATTTTCGTACT+TGG | - | chr7_4:63190069-63190088 | Msa1170100:CDS | 40.0% |
GAGCATGGAAACTCTCATTA+TGG | - | chr7_4:63190382-63190401 | Msa1170100:CDS | 40.0% | |
!! | TGCTACGAGAGGCATTATAT+GGG | + | chr7_4:63190411-63190430 | None:intergenic | 40.0% |
TCATTGTTGAGGTATGGTCT+TGG | - | chr7_4:63190460-63190479 | Msa1170100:CDS | 40.0% | |
! | TAAAAAGCATGCACACACAG+AGG | + | chr7_4:63190603-63190622 | None:intergenic | 40.0% |
! | TGAGTATTTGGTTCCCATGA+TGG | + | chr7_4:63190824-63190843 | None:intergenic | 40.0% |
ATCATGGGAACCAAATACTC+AGG | - | chr7_4:63190823-63190842 | Msa1170100:intron | 40.0% | |
TCATGGGAACCAAATACTCA+GGG | - | chr7_4:63190824-63190843 | Msa1170100:intron | 40.0% | |
! | TTTTGCAACTGGCAATCACT+TGG | - | chr7_4:63191009-63191028 | Msa1170100:intron | 40.0% |
ATAGGGGTGATTATTCTGGT+TGG | + | chr7_4:63191056-63191075 | None:intergenic | 40.0% | |
GAAGATAGGGGTGATTATTC+TGG | + | chr7_4:63191060-63191079 | None:intergenic | 40.0% | |
ATCACCCCTATCTTCTTGAT+TGG | - | chr7_4:63191065-63191084 | Msa1170100:intron | 40.0% | |
!! | TCATTCTGTGTCAAGTTGGA+AGG | + | chr7_4:63191184-63191203 | None:intergenic | 40.0% |
CAAATGAGTATCACGAGGAT+CGG | - | chr7_4:63191224-63191243 | Msa1170100:intron | 40.0% | |
AAATGAGTATCACGAGGATC+GGG | - | chr7_4:63191225-63191244 | Msa1170100:intron | 40.0% | |
GTTTGGTCATTGAAATCTGG+AGG | + | chr7_4:63191406-63191425 | None:intergenic | 40.0% | |
! | TTTATAGTGGGAGTTTCTGG+AGG | + | chr7_4:63191595-63191614 | None:intergenic | 40.0% |
! | GCAGTGCTGGAATTTATAGT+GGG | + | chr7_4:63191607-63191626 | None:intergenic | 40.0% |
! | AGCAGTGCTGGAATTTATAG+TGG | + | chr7_4:63191608-63191627 | None:intergenic | 40.0% |
TATGAACCTCAGCTTGATGT+TGG | - | chr7_4:63191800-63191819 | Msa1170100:five_prime_UTR | 40.0% | |
TAAGTTCCAACATCAAGCTG+AGG | + | chr7_4:63191809-63191828 | None:intergenic | 40.0% | |
! | GCCTTCCATTTTCAGATGTA+AGG | - | chr7_4:63191845-63191864 | Msa1170100:five_prime_UTR | 40.0% |
GATGAAACAGTAGCGAAGGA+AGG | + | chr7_4:63185779-63185798 | None:intergenic | 45.0% | |
GAATTGAAGTTAGCAGTCCG+AGG | - | chr7_4:63186239-63186258 | Msa1170100:CDS | 45.0% | |
! | GCCAATTTGGAACAACCCAA+TGG | + | chr7_4:63186388-63186407 | None:intergenic | 45.0% |
! | TCAAGTTGCCCATATTTGGC+TGG | - | chr7_4:63186709-63186728 | Msa1170100:intron | 45.0% |
CCATTCCCCAAAGACCAAAA+CGG | + | chr7_4:63186898-63186917 | None:intergenic | 45.0% | |
! | TTGGTCTTTGGGGAATGGAT+TGG | - | chr7_4:63186900-63186919 | Msa1170100:intron | 45.0% |
TTTAGCAGACCAAGTGGTTC+CGG | - | chr7_4:63186958-63186977 | Msa1170100:intron | 45.0% | |
AGCCCTTCAGATTTCCTCAA+TGG | - | chr7_4:63187105-63187124 | Msa1170100:intron | 45.0% | |
! | GGGTTCACCATATGCTTTTC+AGG | - | chr7_4:63187252-63187271 | Msa1170100:CDS | 45.0% |
GGCTCCGTAATGCAAAATGT+GGG | - | chr7_4:63187304-63187323 | Msa1170100:intron | 45.0% | |
CCGTAATGCAAAATGTGGGA+TGG | - | chr7_4:63187308-63187327 | Msa1170100:intron | 45.0% | |
GGAATTAAGCCCTGTGATCT+TGG | - | chr7_4:63187345-63187364 | Msa1170100:intron | 45.0% | |
GCTTCTTTGCCAAGATCACA+GGG | + | chr7_4:63187357-63187376 | None:intergenic | 45.0% | |
AGCTTCTTTGCCAAGATCAC+AGG | + | chr7_4:63187358-63187377 | None:intergenic | 45.0% | |
GTAAGTGTGAGTGGGGTTAA+AGG | + | chr7_4:63187393-63187412 | None:intergenic | 45.0% | |
! | AGCTTTGGTAAGTGTGAGTG+GGG | + | chr7_4:63187400-63187419 | None:intergenic | 45.0% |
! | TACGCCAGTTTTTCTACAGC+AGG | - | chr7_4:63187508-63187527 | Msa1170100:intron | 45.0% |
TCGGAAACTATGTGTGCTGA+AGG | - | chr7_4:63187713-63187732 | Msa1170100:CDS | 45.0% | |
CCCATTTCACAATGGTTTCC+AGG | - | chr7_4:63187822-63187841 | Msa1170100:intron | 45.0% | |
TGCTGGCATATCTCTTTCTG+AGG | - | chr7_4:63188513-63188532 | Msa1170100:intron | 45.0% | |
TTCGAGATGATGCTGTGCTT+GGG | + | chr7_4:63188562-63188581 | None:intergenic | 45.0% | |
GATGGTCAAACTTGTCTAGG+TGG | - | chr7_4:63188582-63188601 | Msa1170100:intron | 45.0% | |
TATAGGTCGACCATCTCTTC+AGG | - | chr7_4:63189388-63189407 | Msa1170100:intron | 45.0% | |
TAATCCGATGCCTGAAGAGA+TGG | + | chr7_4:63189401-63189420 | None:intergenic | 45.0% | |
TGCAATTGCAGATGAGCTTC+TGG | - | chr7_4:63189728-63189747 | Msa1170100:CDS | 45.0% | |
TCCCGAGGGAACAATATCTA+TGG | - | chr7_4:63189758-63189777 | Msa1170100:CDS | 45.0% | |
CGAGGGAACAATATCTATGG+TGG | - | chr7_4:63189761-63189780 | Msa1170100:CDS | 45.0% | |
TATATGCCAAAGAGATGGCG+TGG | - | chr7_4:63189798-63189817 | Msa1170100:intron | 45.0% | |
CAGGCAGAATACCTGGAATA+AGG | + | chr7_4:63189862-63189881 | None:intergenic | 45.0% | |
CTTATTCCAGGTATTCTGCC+TGG | - | chr7_4:63189860-63189879 | Msa1170100:intron | 45.0% | |
TATTCCAGGTATTCTGCCTG+GGG | - | chr7_4:63189862-63189881 | Msa1170100:intron | 45.0% | |
!! | GCTACGAGAGGCATTATATG+GGG | + | chr7_4:63190410-63190429 | None:intergenic | 45.0% |
!! | CTGCTACGAGAGGCATTATA+TGG | + | chr7_4:63190412-63190431 | None:intergenic | 45.0% |
ATAATGCCTCTCGTAGCAGA+AGG | - | chr7_4:63190413-63190432 | Msa1170100:CDS | 45.0% | |
AAGGAGTTCACAGGGAAAGA+TGG | - | chr7_4:63190432-63190451 | Msa1170100:CDS | 45.0% | |
CATGGGAACCAAATACTCAG+GGG | - | chr7_4:63190825-63190844 | Msa1170100:intron | 45.0% | |
AACTGCTTCCCCTGAGTATT+TGG | + | chr7_4:63190836-63190855 | None:intergenic | 45.0% | |
GAGCGGAAGTTATCAGTACA+TGG | - | chr7_4:63190881-63190900 | Msa1170100:intron | 45.0% | |
!! | CCAGTTGCAAAAGTGCTGTA+TGG | + | chr7_4:63191001-63191020 | None:intergenic | 45.0% |
! | CCATACAGCACTTTTGCAAC+TGG | - | chr7_4:63190998-63191017 | Msa1170100:intron | 45.0% |
GCAATCACTTGGATTCGTTG+TGG | - | chr7_4:63191020-63191039 | Msa1170100:intron | 45.0% | |
TCTCTTGAAGCTGCATCATG+AGG | + | chr7_4:63191106-63191125 | None:intergenic | 45.0% | |
GGGTTCATTCTGTGTCAAGT+TGG | + | chr7_4:63191188-63191207 | None:intergenic | 45.0% | |
CTAAAGCTCTCCCTAAGGAT+GGG | + | chr7_4:63191283-63191302 | None:intergenic | 45.0% | |
ACTAAAGCTCTCCCTAAGGA+TGG | + | chr7_4:63191284-63191303 | None:intergenic | 45.0% | |
! | GTTTTCTGATAGAGGGTCAG+AGG | - | chr7_4:63191447-63191466 | Msa1170100:intron | 45.0% |
ATGACAGATGACTTAGAGGC+AGG | - | chr7_4:63191532-63191551 | Msa1170100:intron | 45.0% | |
TACTCAAAAGCTAGCAGTGC+TGG | + | chr7_4:63191620-63191639 | None:intergenic | 45.0% | |
AGAGAGGGACAATCATGACT+TGG | + | chr7_4:63191715-63191734 | None:intergenic | 45.0% | |
GGGGTCCTTACATCTGAAAA+TGG | + | chr7_4:63191853-63191872 | None:intergenic | 45.0% | |
GTTCGGAAGGAGATGAGCAT+AGG | + | chr7_4:63185606-63185625 | None:intergenic | 50.0% | |
TCAACGCCAAAGTCCCAAAG+GGG | + | chr7_4:63186557-63186576 | None:intergenic | 50.0% | |
GTCAACGCCAAAGTCCCAAA+GGG | + | chr7_4:63186558-63186577 | None:intergenic | 50.0% | |
TGTCAACGCCAAAGTCCCAA+AGG | + | chr7_4:63186559-63186578 | None:intergenic | 50.0% | |
!! | CCGTTTTGGTCTTTGGGGAA+TGG | - | chr7_4:63186895-63186914 | Msa1170100:intron | 50.0% |
!! | CTAAAAGCACCGGAACCACT+TGG | + | chr7_4:63186970-63186989 | None:intergenic | 50.0% |
GGGCTCCGTAATGCAAAATG+TGG | - | chr7_4:63187303-63187322 | Msa1170100:intron | 50.0% | |
GGGATGGATGCTGTTGAATC+TGG | - | chr7_4:63187324-63187343 | Msa1170100:intron | 50.0% | |
AGTCATGAGACTGATGCGGA+AGG | - | chr7_4:63187755-63187774 | Msa1170100:CDS | 50.0% | |
TCACAATGGTTTCCAGGTGC+TGG | - | chr7_4:63187828-63187847 | Msa1170100:intron | 50.0% | |
CTTCGAGATGATGCTGTGCT+TGG | + | chr7_4:63188563-63188582 | None:intergenic | 50.0% | |
GCACAGCATCATCTCGAAGA+TGG | - | chr7_4:63188564-63188583 | Msa1170100:intron | 50.0% | |
! | GGGCCTCCATCAAAGGTTTT+TGG | + | chr7_4:63188821-63188840 | None:intergenic | 50.0% |
TCGACCATCTCTTCAGGCAT+CGG | - | chr7_4:63189394-63189413 | Msa1170100:intron | 50.0% | |
CAGAATTGCAGCAAAGCCAC+CGG | + | chr7_4:63189511-63189530 | None:intergenic | 50.0% | |
!! | CTTCTGGTCTTAGATCCCGA+GGG | - | chr7_4:63189744-63189763 | Msa1170100:CDS | 50.0% |
TCTTTGCCACGCCATCTCTT+TGG | + | chr7_4:63189807-63189826 | None:intergenic | 50.0% | |
! | ATGTATTGATCGGACACCCC+AGG | + | chr7_4:63189881-63189900 | None:intergenic | 50.0% |
!! | AAGGTGTTGGGCATGTTTGC+AGG | - | chr7_4:63190204-63190223 | Msa1170100:CDS | 50.0% |
GGCATGTTTGCAGGTTAGCA+TGG | - | chr7_4:63190213-63190232 | Msa1170100:CDS | 50.0% | |
TGAACTCCTTCTGCTACGAG+AGG | + | chr7_4:63190422-63190441 | None:intergenic | 50.0% | |
TCGTAGCAGAAGGAGTTCAC+AGG | - | chr7_4:63190423-63190442 | Msa1170100:CDS | 50.0% | |
CGTAGCAGAAGGAGTTCACA+GGG | - | chr7_4:63190424-63190443 | Msa1170100:CDS | 50.0% | |
CATCTTCCCCTCCTAGAATG+TGG | - | chr7_4:63190915-63190934 | Msa1170100:intron | 50.0% | |
TTCCCCTCCTAGAATGTGGA+GGG | - | chr7_4:63190919-63190938 | Msa1170100:intron | 50.0% | |
! | TACCCCTCCACATTCTAGGA+GGG | + | chr7_4:63190925-63190944 | None:intergenic | 50.0% |
TCTTCATCCCCTGCCGTATT+GGG | + | chr7_4:63190950-63190969 | None:intergenic | 50.0% | |
CAGGGGATGAAGACAGAAAC+AGG | - | chr7_4:63190957-63190976 | Msa1170100:intron | 50.0% | |
AGTGCTGTATGGCATTTCCC+TGG | + | chr7_4:63190990-63191009 | None:intergenic | 50.0% | |
!! | GGAAGGCATCGAATAGTCTC+TGG | + | chr7_4:63191167-63191186 | None:intergenic | 50.0% |
ATCGGGCTGCATCTCAACTT+GGG | - | chr7_4:63191242-63191261 | Msa1170100:intron | 50.0% | |
CTCATCAGCTCCCATCCTTA+GGG | - | chr7_4:63191270-63191289 | Msa1170100:intron | 50.0% | |
CCTGACTAAAGCTCTCCCTA+AGG | + | chr7_4:63191288-63191307 | None:intergenic | 50.0% | |
! | CCTTAGGGAGAGCTTTAGTC+AGG | - | chr7_4:63191285-63191304 | Msa1170100:intron | 50.0% |
TTCTAGCCCACCAATGGCTT+CGG | + | chr7_4:63191342-63191361 | None:intergenic | 50.0% | |
AGGACCCCAGCAAAATAGTC+TGG | - | chr7_4:63191865-63191884 | Msa1170100:five_prime_UTR | 50.0% | |
TTAGGTTCAGCTCGCCCCTT+TGG | - | chr7_4:63186540-63186559 | Msa1170100:CDS | 55.0% | |
TAGGTTCAGCTCGCCCCTTT+GGG | - | chr7_4:63186541-63186560 | Msa1170100:CDS | 55.0% | |
GGCGCGTCATCTTTGACTAG+AGG | - | chr7_4:63187012-63187031 | Msa1170100:CDS | 55.0% | |
TACGGAAGGATCCCAAGTCC+AGG | - | chr7_4:63187075-63187094 | Msa1170100:intron | 55.0% | |
GGCTCTCACTTCCTGGACTT+GGG | + | chr7_4:63187089-63187108 | None:intergenic | 55.0% | |
TCTGAAGGGCTCTCACTTCC+TGG | + | chr7_4:63187096-63187115 | None:intergenic | 55.0% | |
! | CACTGATGGGCCTCCATCAA+AGG | + | chr7_4:63188828-63188847 | None:intergenic | 55.0% |
CTTTGATGGAGGCCCATCAG+TGG | - | chr7_4:63188826-63188845 | Msa1170100:CDS | 55.0% | |
GCTCATCTGCAATTGCAGCC+CGG | + | chr7_4:63189725-63189744 | None:intergenic | 55.0% | |
!! | GCTTCTGGTCTTAGATCCCG+AGG | - | chr7_4:63189743-63189762 | Msa1170100:CDS | 55.0% |
CTTCCCCTCCTAGAATGTGG+AGG | - | chr7_4:63190918-63190937 | Msa1170100:intron | 55.0% | |
TCCCCTCCTAGAATGTGGAG+GGG | - | chr7_4:63190920-63190939 | Msa1170100:intron | 55.0% | |
! | ACCCCTCCACATTCTAGGAG+GGG | + | chr7_4:63190924-63190943 | None:intergenic | 55.0% |
CTACCCCTCCACATTCTAGG+AGG | + | chr7_4:63190926-63190945 | None:intergenic | 55.0% | |
GGACTACCCCTCCACATTCT+AGG | + | chr7_4:63190929-63190948 | None:intergenic | 55.0% | |
GTGGAGGGGTAGTCCCAATA+CGG | - | chr7_4:63190934-63190953 | Msa1170100:intron | 55.0% | |
GTCTTCATCCCCTGCCGTAT+TGG | + | chr7_4:63190951-63190970 | None:intergenic | 55.0% | |
GATCGGGCTGCATCTCAACT+TGG | - | chr7_4:63191241-63191260 | Msa1170100:intron | 55.0% | |
TCGGGCTGCATCTCAACTTG+GGG | - | chr7_4:63191243-63191262 | Msa1170100:intron | 55.0% | |
CCTAAGGATGGGAGCTGATG+AGG | + | chr7_4:63191272-63191291 | None:intergenic | 55.0% | |
CCTCATCAGCTCCCATCCTT+AGG | - | chr7_4:63191269-63191288 | Msa1170100:intron | 55.0% | |
TCTAGCCCACCAATGGCTTC+GGG | + | chr7_4:63191341-63191360 | None:intergenic | 55.0% | |
GACGACTTCTAGCCCACCAA+TGG | + | chr7_4:63191348-63191367 | None:intergenic | 55.0% | |
!! | GGTGGGCTAGAAGTCGTCTA+CGG | - | chr7_4:63191350-63191369 | Msa1170100:intron | 55.0% |
GCTAGAAGTCGTCTACGGAG+TGG | - | chr7_4:63191355-63191374 | Msa1170100:intron | 55.0% | |
TCTACGGAGTGGACAAGCTC+AGG | - | chr7_4:63191366-63191385 | Msa1170100:intron | 55.0% | |
!! | AGCTCGCCCCTTTGGGACTT+TGG | - | chr7_4:63186548-63186567 | Msa1170100:CDS | 60.0% |
GGGCTCTCACTTCCTGGACT+TGG | + | chr7_4:63187090-63187109 | None:intergenic | 60.0% | |
TGAACTTTCGGGCCAGCACC+TGG | + | chr7_4:63187843-63187862 | None:intergenic | 60.0% | |
GACACCCCAGGCAGAATACC+TGG | + | chr7_4:63189869-63189888 | None:intergenic | 60.0% | |
AGGGGTAGTCCCAATACGGC+AGG | - | chr7_4:63190938-63190957 | Msa1170100:intron | 60.0% | |
GGGGTAGTCCCAATACGGCA+GGG | - | chr7_4:63190939-63190958 | Msa1170100:intron | 60.0% | |
GGGTAGTCCCAATACGGCAG+GGG | - | chr7_4:63190940-63190959 | Msa1170100:intron | 60.0% | |
!! | CAATGGCTTCGGGTTGCGTG+GGG | + | chr7_4:63191331-63191350 | None:intergenic | 60.0% |
!! | CCAATGGCTTCGGGTTGCGT+GGG | + | chr7_4:63191332-63191351 | None:intergenic | 60.0% |
!! | ACCAATGGCTTCGGGTTGCG+TGG | + | chr7_4:63191333-63191352 | None:intergenic | 60.0% |
ACGCAACCCGAAGCCATTGG+TGG | - | chr7_4:63191332-63191351 | Msa1170100:intron | 60.0% | |
CGCAACCCGAAGCCATTGGT+GGG | - | chr7_4:63191333-63191352 | Msa1170100:intron | 60.0% | |
CCCACGCAACCCGAAGCCAT+TGG | - | chr7_4:63191329-63191348 | Msa1170100:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 63185549 | 63191888 | 63185549 | ID=Msa1170100;Name=Msa1170100 |
chr7_4 | mRNA | 63185549 | 63191888 | 63185549 | ID=Msa1170100-mRNA-1;Parent=Msa1170100;Name=Msa1170100-mRNA-1;_AED=0.05;_eAED=0.05;_QI=415|1|1|1|0.8|0.72|11|252|865 |
chr7_4 | exon | 63185549 | 63186632 | 63185549 | ID=Msa1170100-mRNA-1:exon:20202;Parent=Msa1170100-mRNA-1 |
chr7_4 | exon | 63186967 | 63187077 | 63186967 | ID=Msa1170100-mRNA-1:exon:20201;Parent=Msa1170100-mRNA-1 |
chr7_4 | exon | 63187212 | 63187282 | 63187212 | ID=Msa1170100-mRNA-1:exon:20200;Parent=Msa1170100-mRNA-1 |
chr7_4 | exon | 63187363 | 63187440 | 63187363 | ID=Msa1170100-mRNA-1:exon:20199;Parent=Msa1170100-mRNA-1 |
chr7_4 | exon | 63187568 | 63187774 | 63187568 | ID=Msa1170100-mRNA-1:exon:20198;Parent=Msa1170100-mRNA-1 |
chr7_4 | exon | 63187865 | 63188044 | 63187865 | ID=Msa1170100-mRNA-1:exon:20197;Parent=Msa1170100-mRNA-1 |
chr7_4 | exon | 63188812 | 63189034 | 63188812 | ID=Msa1170100-mRNA-1:exon:20196;Parent=Msa1170100-mRNA-1 |
chr7_4 | exon | 63189482 | 63189802 | 63189482 | ID=Msa1170100-mRNA-1:exon:20195;Parent=Msa1170100-mRNA-1 |
chr7_4 | exon | 63189908 | 63190555 | 63189908 | ID=Msa1170100-mRNA-1:exon:20194;Parent=Msa1170100-mRNA-1 |
chr7_4 | exon | 63190830 | 63190893 | 63190830 | ID=Msa1170100-mRNA-1:exon:20193;Parent=Msa1170100-mRNA-1 |
chr7_4 | exon | 63191611 | 63191888 | 63191611 | ID=Msa1170100-mRNA-1:exon:20192;Parent=Msa1170100-mRNA-1 |
chr7_4 | five_prime_UTR | 63191611 | 63191888 | 63191611 | ID=Msa1170100-mRNA-1:five_prime_utr;Parent=Msa1170100-mRNA-1 |
chr7_4 | five_prime_UTR | 63190830 | 63190893 | 63190830 | ID=Msa1170100-mRNA-1:five_prime_utr;Parent=Msa1170100-mRNA-1 |
chr7_4 | five_prime_UTR | 63190483 | 63190555 | 63190483 | ID=Msa1170100-mRNA-1:five_prime_utr;Parent=Msa1170100-mRNA-1 |
chr7_4 | CDS | 63189908 | 63190482 | 63189908 | ID=Msa1170100-mRNA-1:cds;Parent=Msa1170100-mRNA-1 |
chr7_4 | CDS | 63189482 | 63189802 | 63189482 | ID=Msa1170100-mRNA-1:cds;Parent=Msa1170100-mRNA-1 |
chr7_4 | CDS | 63188812 | 63189034 | 63188812 | ID=Msa1170100-mRNA-1:cds;Parent=Msa1170100-mRNA-1 |
chr7_4 | CDS | 63187865 | 63188044 | 63187865 | ID=Msa1170100-mRNA-1:cds;Parent=Msa1170100-mRNA-1 |
chr7_4 | CDS | 63187568 | 63187774 | 63187568 | ID=Msa1170100-mRNA-1:cds;Parent=Msa1170100-mRNA-1 |
chr7_4 | CDS | 63187363 | 63187440 | 63187363 | ID=Msa1170100-mRNA-1:cds;Parent=Msa1170100-mRNA-1 |
chr7_4 | CDS | 63187212 | 63187282 | 63187212 | ID=Msa1170100-mRNA-1:cds;Parent=Msa1170100-mRNA-1 |
chr7_4 | CDS | 63186967 | 63187077 | 63186967 | ID=Msa1170100-mRNA-1:cds;Parent=Msa1170100-mRNA-1 |
chr7_4 | CDS | 63185801 | 63186632 | 63185801 | ID=Msa1170100-mRNA-1:cds;Parent=Msa1170100-mRNA-1 |
chr7_4 | three_prime_UTR | 63185549 | 63185800 | 63185549 | ID=Msa1170100-mRNA-1:three_prime_utr;Parent=Msa1170100-mRNA-1 |
Gene Sequence |
Protein sequence |