Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1165750 | XP_013463249.1 | 83.721 | 86 | 14 | 0 | 205 | 290 | 208 | 293 | 3.78e-37 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1165750 | sp|Q9STH1|HSOP3_ARATH | 77.966 | 59 | 13 | 0 | 28 | 86 | 499 | 557 | 5.60e-22 | 99.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1165750 | A0A072V6L5 | 83.721 | 86 | 14 | 0 | 205 | 290 | 208 | 293 | 1.80e-37 | 144 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0656810 | Msa1165750 | 0.801113 | 1.049206e-48 | -8.615850e-47 |
| Msa0825270 | Msa1165750 | 0.801773 | 7.685011e-49 | -8.615850e-47 |
| Msa0142110 | Msa1165750 | 0.800354 | 1.498868e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1165750 | MtrunA17_Chr2g0295931 | 83.721 | 86 | 14 | 0 | 205 | 290 | 208 | 293 | 3.47e-41 | 144 |
| Msa1165750 | MtrunA17_Chr6g0452891 | 68.571 | 105 | 29 | 1 | 96 | 200 | 1 | 101 | 4.68e-41 | 141 |
| Msa1165750 | MtrunA17_Chr6g0452881 | 65.455 | 110 | 31 | 1 | 82 | 184 | 555 | 664 | 6.95e-32 | 124 |
| Msa1165750 | MtrunA17_Chr5g0398901 | 91.525 | 59 | 5 | 0 | 28 | 86 | 522 | 580 | 1.66e-28 | 114 |
| Msa1165750 | MtrunA17_Chr4g0037071 | 78.788 | 33 | 7 | 0 | 151 | 183 | 1 | 33 | 2.91e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1165750 | AT4G12400.2 | 77.966 | 59 | 13 | 0 | 28 | 86 | 499 | 557 | 5.69e-23 | 99.0 |
| Msa1165750 | AT1G12270.1 | 72.881 | 59 | 16 | 0 | 28 | 86 | 513 | 571 | 7.96e-20 | 89.7 |
| Msa1165750 | AT1G62740.1 | 69.492 | 59 | 18 | 0 | 28 | 86 | 512 | 570 | 4.31e-19 | 87.4 |
| Msa1165750 | AT4G15830.1 | 45.238 | 84 | 43 | 1 | 209 | 289 | 210 | 293 | 1.22e-14 | 73.2 |
Find 84 sgRNAs with CRISPR-Local
Find 361 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACGAACCTTGAGAATATT+TGG | 0.171658 | 7_4:+57715890 | None:intergenic |
| TTCTTTGCCATCAAGTTTAA+AGG | 0.248985 | 7_4:-57720231 | Msa1165750:intron |
| TCCATCAAATTTACTTCATC+TGG | 0.263023 | 7_4:+57717836 | None:intergenic |
| ATTGAGGAAATGGAGGAGTT+TGG | 0.270099 | 7_4:-57715405 | Msa1165750:CDS |
| TTCCGGCACTGATCAGCTTT+TGG | 0.271295 | 7_4:+57717863 | None:intergenic |
| ACACAAACCTTTAAACTTGA+TGG | 0.278793 | 7_4:+57720224 | None:intergenic |
| GCAGGTATTGGTTGATTTCC+AGG | 0.298727 | 7_4:-57717941 | Msa1165750:intron |
| AAGAGTTCTTTCCGATTCTT+TGG | 0.301726 | 7_4:+57716199 | None:intergenic |
| CTTGCTGCATCTCTTGCCTC+TGG | 0.306269 | 7_4:+57715333 | None:intergenic |
| AAGCAAACCTGTCTCATAAC+AGG | 0.314328 | 7_4:+57718003 | None:intergenic |
| TTGAGGAAATGGAGGAGTTT+GGG | 0.339563 | 7_4:-57715404 | Msa1165750:CDS |
| TTCCGACCTTTACCTCCAGC+TGG | 0.342698 | 7_4:-57716177 | Msa1165750:CDS |
| TTCTTTCCGATTCTTTGGTC+TGG | 0.349769 | 7_4:+57716204 | None:intergenic |
| GTATGTTCCTGTGCAGCCTT+AGG | 0.362687 | 7_4:+57717913 | None:intergenic |
| TTACTTCATCTGGACAATTC+CGG | 0.371932 | 7_4:+57717846 | None:intergenic |
| GGTTGTTGGCTTGACGCATT+AGG | 0.377636 | 7_4:+57716111 | None:intergenic |
| GGAATAACAGGTCGTGCATT+TGG | 0.404546 | 7_4:+57716237 | None:intergenic |
| TGTGGAAGAGGAACAGAAGA+TGG | 0.415666 | 7_4:-57715271 | Msa1165750:CDS |
| TAACAGGTCGTGCATTTGGC+AGG | 0.415689 | 7_4:+57716241 | None:intergenic |
| TGAAAGATGTTCTGTATCTC+TGG | 0.423900 | 7_4:+57718030 | None:intergenic |
| GGCATAGGAAGTGGAATAAC+AGG | 0.428200 | 7_4:+57716225 | None:intergenic |
| GTCCATCACACCCGGGATCT+TGG | 0.429651 | 7_4:+57717891 | None:intergenic |
| GGCCCAAGGTGTTATCTCAT+TGG | 0.432146 | 7_4:-57716052 | Msa1165750:CDS |
| TTGCTGCATCTCTTGCCTCT+GGG | 0.432947 | 7_4:+57715334 | None:intergenic |
| TATGTTTCTAAAGGGTAGTA+TGG | 0.447299 | 7_4:-57715437 | Msa1165750:intron |
| GATTCAGATGAGGTAGAATC+TGG | 0.448129 | 7_4:+57716139 | None:intergenic |
| AGTAGAGCATGTGGCCCAGC+TGG | 0.456641 | 7_4:+57716162 | None:intergenic |
| CAGCTGATTTAGTGAATGAT+AGG | 0.457596 | 7_4:-57715359 | Msa1165750:CDS |
| TCAAGACCCTGTTATGAGAC+AGG | 0.459322 | 7_4:-57718010 | Msa1165750:intron |
| AATATCCAACAGTTGGTTGT+TGG | 0.465198 | 7_4:+57716097 | None:intergenic |
| CTTTGGTCTGGCATAGGAAG+TGG | 0.467057 | 7_4:+57716216 | None:intergenic |
| GCCCAAGGTGTTATCTCATT+GGG | 0.471147 | 7_4:-57716051 | Msa1165750:CDS |
| GCAGCAGGGAATTGAGGAAA+TGG | 0.471845 | 7_4:-57715415 | Msa1165750:CDS |
| AAAACTGAAAGAGCATTAGT+TGG | 0.474624 | 7_4:+57715213 | None:intergenic |
| TGGATCTTGTCCATCACACC+CGG | 0.479410 | 7_4:+57717883 | None:intergenic |
| TCACTGTAAAACACGTCAAA+AGG | 0.480580 | 7_4:+57715795 | None:intergenic |
| CCGATTCTTTGGTCTGGCAT+AGG | 0.497655 | 7_4:+57716210 | None:intergenic |
| TGTGGCCCAGCTGGAGGTAA+AGG | 0.498674 | 7_4:+57716171 | None:intergenic |
| ATCCAAAAGCTGATCAGTGC+CGG | 0.507708 | 7_4:-57717865 | Msa1165750:CDS |
| AATCATTAAGAATGTGGAAG+AGG | 0.508102 | 7_4:-57715283 | Msa1165750:CDS |
| TAATTTGATTAGTTCACTCA+TGG | 0.508846 | 7_4:-57716073 | Msa1165750:CDS |
| CTAAAGGGTAGTATGGCAGC+AGG | 0.510192 | 7_4:-57715430 | Msa1165750:intron |
| TATTGTAACTTCAGTGTATG+AGG | 0.510822 | 7_4:-57715307 | Msa1165750:CDS |
| TGGCTTGACGCATTAGGACC+AGG | 0.517377 | 7_4:+57716117 | None:intergenic |
| TCCGACCTTTACCTCCAGCT+GGG | 0.522233 | 7_4:-57716176 | Msa1165750:CDS |
| AAATTAGAATATCCAACAGT+TGG | 0.522964 | 7_4:+57716090 | None:intergenic |
| TACCAAGATCCCGGGTGTGA+TGG | 0.525908 | 7_4:-57717893 | Msa1165750:CDS |
| AGTATGGCAGCAGGGAATTG+AGG | 0.532232 | 7_4:-57715421 | Msa1165750:CDS |
| ATTCTACCTCATCTGAATCC+TGG | 0.532369 | 7_4:-57716135 | Msa1165750:CDS |
| GGAAAATCCTAAGGCTGCAC+AGG | 0.537666 | 7_4:-57717920 | Msa1165750:CDS |
| AAGCTGTAAGAATGAAGAGT+TGG | 0.537801 | 7_4:-57715865 | Msa1165750:CDS |
| ACCCAATGAGATAACACCTT+GGG | 0.538987 | 7_4:+57716050 | None:intergenic |
| GGAAATGGAGGAGTTTGGGA+TGG | 0.539001 | 7_4:-57715400 | Msa1165750:CDS |
| ATTGATTTAGTTACCTCCGC+AGG | 0.540851 | 7_4:+57716018 | None:intergenic |
| TGATTTCCAGGAAAATCCTA+AGG | 0.554254 | 7_4:-57717929 | Msa1165750:CDS |
| CAAAATGCATGTGCATTATG+TGG | 0.555248 | 7_4:-57715822 | Msa1165750:CDS |
| CCTATGCCAGACCAAAGAAT+CGG | 0.556854 | 7_4:-57716210 | Msa1165750:CDS |
| AACAGGTCGTGCATTTGGCA+GGG | 0.567922 | 7_4:+57716242 | None:intergenic |
| ACAGGTCGTGCATTTGGCAG+GGG | 0.568189 | 7_4:+57716243 | None:intergenic |
| TCAAGCCAACAACCAACTGT+TGG | 0.570628 | 7_4:-57716102 | Msa1165750:CDS |
| ACAGGAACATACCAAGATCC+CGG | 0.572528 | 7_4:-57717902 | Msa1165750:CDS |
| ATTAGTTCACTCATGGCCCA+AGG | 0.574805 | 7_4:-57716066 | Msa1165750:CDS |
| GATGTTCTGTATCTCTGGAT+CGG | 0.576021 | 7_4:+57718035 | None:intergenic |
| AGGAACAGAAGATGGAAGTG+TGG | 0.576946 | 7_4:-57715263 | Msa1165750:CDS |
| GAATATTTGGATCAAACTCA+AGG | 0.580223 | 7_4:+57715903 | None:intergenic |
| GTTTGATCCAAATATTCTCA+AGG | 0.588305 | 7_4:-57715897 | Msa1165750:CDS |
| TGAGGCAATCATTAAGAATG+TGG | 0.592712 | 7_4:-57715289 | Msa1165750:CDS |
| TTGATTTAGTTACCTCCGCA+GGG | 0.602764 | 7_4:+57716019 | None:intergenic |
| CAGGAACATACCAAGATCCC+GGG | 0.609456 | 7_4:-57717901 | Msa1165750:CDS |
| AGAGCATGTGGCCCAGCTGG+AGG | 0.611285 | 7_4:+57716165 | None:intergenic |
| GATTTAGTTACCTCCGCAGG+GGG | 0.611467 | 7_4:+57716021 | None:intergenic |
| GCCCAGCTGGAGGTAAAGGT+CGG | 0.612329 | 7_4:+57716175 | None:intergenic |
| CAGGTCGTGCATTTGGCAGG+GGG | 0.621835 | 7_4:+57716244 | None:intergenic |
| GATTAAATATGCAGATACAA+AGG | 0.638966 | 7_4:-57718738 | Msa1165750:intron |
| GCAGGGAATTGAGGAAATGG+AGG | 0.641748 | 7_4:-57715412 | Msa1165750:CDS |
| TACCCAATGAGATAACACCT+TGG | 0.648658 | 7_4:+57716049 | None:intergenic |
| AGCAAACCTGTCTCATAACA+GGG | 0.656878 | 7_4:+57718004 | None:intergenic |
| GGATCTTGTCCATCACACCC+GGG | 0.665596 | 7_4:+57717884 | None:intergenic |
| GTTGGAAGTTCCGTCCGACG+AGG | 0.666060 | 7_4:-57715847 | Msa1165750:CDS |
| AGAATCTGGAGTAGAGCATG+TGG | 0.672286 | 7_4:+57716153 | None:intergenic |
| TAAAGGGTAGTATGGCAGCA+GGG | 0.673645 | 7_4:-57715429 | Msa1165750:intron |
| TGATTTAGTTACCTCCGCAG+GGG | 0.675112 | 7_4:+57716020 | None:intergenic |
| TTAGGACCAGGATTCAGATG+AGG | 0.688408 | 7_4:+57716129 | None:intergenic |
| AGTGAATGATAGGCTCCCAG+AGG | 0.768815 | 7_4:-57715349 | Msa1165750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTGATTTATATGTTTT+TGG | - | chr7_4:57715470-57715489 | Msa1165750:intron | 10.0% |
| !!! | AAATTGATTTATATGTTTTT+GGG | - | chr7_4:57715471-57715490 | Msa1165750:intron | 10.0% |
| !! | TAAAATCACAATTAAATTAA+GGG | + | chr7_4:57717932-57717951 | None:intergenic | 10.0% |
| !! | AGGAAAAATAATTAAATTAA+GGG | + | chr7_4:57718034-57718053 | None:intergenic | 10.0% |
| !! | AAGGAAAAATAATTAAATTA+AGG | + | chr7_4:57718035-57718054 | None:intergenic | 10.0% |
| !!! | TAAAAAATTTCATTTTTTGT+AGG | - | chr7_4:57718141-57718160 | Msa1165750:intron | 10.0% |
| !!! | ATTTTTTTTATTCATCTAAA+GGG | - | chr7_4:57718937-57718956 | Msa1165750:intron | 10.0% |
| !!! | ATTAAATCAATTTGTTTTAT+TGG | - | chr7_4:57720076-57720095 | Msa1165750:intron | 10.0% |
| !! | TATAAAATCAGTTATATATG+TGG | - | chr7_4:57715733-57715752 | Msa1165750:intron | 15.0% |
| !!! | TTGTATTTTGAATATTTTTC+AGG | - | chr7_4:57717482-57717501 | Msa1165750:intron | 15.0% |
| !! | GTATAATATAGAAACTTTAT+AGG | - | chr7_4:57717877-57717896 | Msa1165750:CDS | 15.0% |
| !! | CTAAAATCACAATTAAATTA+AGG | + | chr7_4:57717933-57717952 | None:intergenic | 15.0% |
| !!! | TTGATCATATATTCATATTT+TGG | - | chr7_4:57718746-57718765 | Msa1165750:intron | 15.0% |
| !!! | CATTTTTTTTATTCATCTAA+AGG | - | chr7_4:57718936-57718955 | Msa1165750:intron | 15.0% |
| !!! | ATTAATTCATTTGCAATTTT+TGG | - | chr7_4:57719265-57719284 | Msa1165750:intron | 15.0% |
| !! | GAGATTATGATATAAAATAG+TGG | - | chr7_4:57715576-57715595 | Msa1165750:intron | 20.0% |
| !!! | TAGTGGATAAAAAGATTTTA+AGG | - | chr7_4:57715593-57715612 | Msa1165750:intron | 20.0% |
| !!! | TATGAATTTGAATGTTGTTT+TGG | - | chr7_4:57715648-57715667 | Msa1165750:intron | 20.0% |
| !!! | TGATGTTTTTGTTATTGAAT+TGG | - | chr7_4:57715813-57715832 | Msa1165750:CDS | 20.0% |
| !!! | TTTTAGAAAATTTGCTCTAA+AGG | - | chr7_4:57715929-57715948 | Msa1165750:intron | 20.0% |
| !! | TGTAAAAAAAATCGTTCTAA+AGG | + | chr7_4:57718054-57718073 | None:intergenic | 20.0% |
| !!! | ACATGAAAATTTTCTAAAGT+CGG | + | chr7_4:57718281-57718300 | None:intergenic | 20.0% |
| !!! | CTCTTATATTTTTTTTACGT+AGG | + | chr7_4:57719130-57719149 | None:intergenic | 20.0% |
| !! | ACGTAAAAAAAATATAAGAG+TGG | - | chr7_4:57719130-57719149 | Msa1165750:intron | 20.0% |
| !! | ATAACTTATCATATCATACT+CGG | + | chr7_4:57719215-57719234 | None:intergenic | 20.0% |
| !! | ACAGAATACAATAACAAAAT+TGG | + | chr7_4:57719612-57719631 | None:intergenic | 20.0% |
| !! | GTATCATATCATAATTCAAA+TGG | + | chr7_4:57719957-57719976 | None:intergenic | 20.0% |
| !!! | ATTTGTTTTATTGGTGTTTT+TGG | - | chr7_4:57720085-57720104 | Msa1165750:intron | 20.0% |
| !!! | TTTGTTTTATTGGTGTTTTT+GGG | - | chr7_4:57720086-57720105 | Msa1165750:intron | 20.0% |
| !!! | ATGCTTTATTGAATCAGTTT+TGG | - | chr7_4:57715210-57715229 | Msa1165750:CDS | 25.0% |
| !!! | TTTGTTGGTTTTTTGTTCTT+TGG | - | chr7_4:57715260-57715279 | Msa1165750:CDS | 25.0% |
| !!! | TGTTTTTTATGTTCTTCTTC+AGG | - | chr7_4:57715297-57715316 | Msa1165750:CDS | 25.0% |
| ! | ATATATGTGGTAGTTAAAAG+TGG | - | chr7_4:57715746-57715765 | Msa1165750:intron | 25.0% |
| !! | ATTATAGATTTTCCTCTCTA+GGG | + | chr7_4:57716056-57716075 | None:intergenic | 25.0% |
| ! | AGGAAAATCTATAATGTCAA+TGG | - | chr7_4:57716061-57716080 | Msa1165750:CDS | 25.0% |
| ! | GGAAAATCTATAATGTCAAT+GGG | - | chr7_4:57716062-57716081 | Msa1165750:CDS | 25.0% |
| ! | TTAGAAGAATGACATGTAAT+TGG | + | chr7_4:57716205-57716224 | None:intergenic | 25.0% |
| ! | CATTGAATTATTCTGTGAAT+AGG | - | chr7_4:57716244-57716263 | Msa1165750:CDS | 25.0% |
| ! | AACATGACATGATAAAATGA+TGG | + | chr7_4:57716421-57716440 | None:intergenic | 25.0% |
| !! | CTTGTGTCTTGATTTTATAA+TGG | + | chr7_4:57716664-57716683 | None:intergenic | 25.0% |
| ! | GATTAAATATGCAGATACAA+AGG | - | chr7_4:57716814-57716833 | Msa1165750:intron | 25.0% |
| !!! | TTAAAACCTTTTTTTGCAGA+CGG | + | chr7_4:57716875-57716894 | None:intergenic | 25.0% |
| ! | CAATTCAAACATGCATTAAA+AGG | - | chr7_4:57717168-57717187 | Msa1165750:intron | 25.0% |
| !! | TGTTTAATACTTCCAGTTTT+TGG | - | chr7_4:57717293-57717312 | Msa1165750:intron | 25.0% |
| !! | ATATCTGAATGCAAAGATTT+TGG | + | chr7_4:57717437-57717456 | None:intergenic | 25.0% |
| !!! | TTTGAATATTTTTCAGGCTA+AGG | - | chr7_4:57717488-57717507 | Msa1165750:intron | 25.0% |
| !! | CATATTTTCAAATCTCTTAG+AGG | - | chr7_4:57717995-57718014 | Msa1165750:intron | 25.0% |
| ! | TTTCTATAAGATTACCGTAT+TGG | + | chr7_4:57718114-57718133 | None:intergenic | 25.0% |
| ! | ACGGTAATCTTATAGAAATT+TGG | - | chr7_4:57718116-57718135 | Msa1165750:intron | 25.0% |
| ! | CTATGTATACAATCATAGTT+AGG | - | chr7_4:57718225-57718244 | Msa1165750:intron | 25.0% |
| ! | TATACAATCATAGTTAGGAA+TGG | - | chr7_4:57718230-57718249 | Msa1165750:intron | 25.0% |
| !! | TTTAGAAAATTTTCATGTGC+AGG | - | chr7_4:57718283-57718302 | Msa1165750:intron | 25.0% |
| !! | AACTTTTCAGCAGAAATATT+TGG | + | chr7_4:57718415-57718434 | None:intergenic | 25.0% |
| !!! | CAATCATTTTTGGAAAGAAT+TGG | + | chr7_4:57718654-57718673 | None:intergenic | 25.0% |
| ! | TCTTTCCAAAAATGATTGAT+TGG | - | chr7_4:57718656-57718675 | Msa1165750:intron | 25.0% |
| ! | CTTTCCAAAAATGATTGATT+GGG | - | chr7_4:57718657-57718676 | Msa1165750:intron | 25.0% |
| !! | AATTCCCAATCAATCATTTT+TGG | + | chr7_4:57718664-57718683 | None:intergenic | 25.0% |
| !!! | ATTCATCTAAAGGGTTTTTT+TGG | - | chr7_4:57718946-57718965 | Msa1165750:intron | 25.0% |
| ! | AATCATTTGCAGCATAATTA+AGG | - | chr7_4:57719053-57719072 | Msa1165750:intron | 25.0% |
| ! | ATCATTTGCAGCATAATTAA+GGG | - | chr7_4:57719054-57719073 | Msa1165750:intron | 25.0% |
| ! | AAATTAGAATATCCAACAGT+TGG | + | chr7_4:57719465-57719484 | None:intergenic | 25.0% |
| !! | TAATTTGATTAGTTCACTCA+TGG | - | chr7_4:57719479-57719498 | Msa1165750:intron | 25.0% |
| ! | TGTTATTGTATTCTGTTTGT+AGG | - | chr7_4:57719616-57719635 | Msa1165750:intron | 25.0% |
| !! | TTCTGTTTGTAGGATTTTAT+TGG | - | chr7_4:57719626-57719645 | Msa1165750:intron | 25.0% |
| ! | ATATCATAATTCAAATGGAG+TGG | + | chr7_4:57719952-57719971 | None:intergenic | 25.0% |
| ! | TATGATATGATACATGATCT+AGG | - | chr7_4:57719964-57719983 | Msa1165750:intron | 25.0% |
| !!! | GTAAAGTTTTTTTACACCAT+CGG | + | chr7_4:57720033-57720052 | None:intergenic | 25.0% |
| ! | GATGGTGTAAAAAAACTTTA+CGG | - | chr7_4:57720032-57720051 | Msa1165750:intron | 25.0% |
| !! | GGTTTATGTATGTTTCTAAA+GGG | - | chr7_4:57720107-57720126 | Msa1165750:intron | 25.0% |
| !!! | GTTCTGTTTTTGTGTTTTGT+TGG | - | chr7_4:57715245-57715264 | Msa1165750:CDS | 30.0% |
| TTCTTTGCCATCAAGTTTAA+AGG | - | chr7_4:57715321-57715340 | Msa1165750:CDS | 30.0% | |
| ACACAAACCTTTAAACTTGA+TGG | + | chr7_4:57715331-57715350 | None:intergenic | 30.0% | |
| TTTAAAGGTTTGTGTGATTC+TGG | - | chr7_4:57715336-57715355 | Msa1165750:CDS | 30.0% | |
| CTTAACACCTAATTTACCAA+GGG | + | chr7_4:57715448-57715467 | None:intergenic | 30.0% | |
| ACTTAACACCTAATTTACCA+AGG | + | chr7_4:57715449-57715468 | None:intergenic | 30.0% | |
| ! | AAGCTGTGATTAAGCTATTT+TGG | - | chr7_4:57715536-57715555 | Msa1165750:intron | 30.0% |
| TTGTGGAAAACAAGTGTATT+TGG | - | chr7_4:57715691-57715710 | Msa1165750:intron | 30.0% | |
| TGTGGAAAACAAGTGTATTT+GGG | - | chr7_4:57715692-57715711 | Msa1165750:intron | 30.0% | |
| ATCAAGTTATATACTTCGCA+CGG | - | chr7_4:57715891-57715910 | Msa1165750:CDS | 30.0% | |
| AAGGAGAGATGTTCAAATTA+CGG | - | chr7_4:57715948-57715967 | Msa1165750:intron | 30.0% | |
| GTTCTCAAATTTACGAAGAA+TGG | + | chr7_4:57715981-57716000 | None:intergenic | 30.0% | |
| CATAATCCGAATATTTGTGA+TGG | - | chr7_4:57716009-57716028 | Msa1165750:intron | 30.0% | |
| ! | CATTATAGATTTTCCTCTCT+AGG | + | chr7_4:57716057-57716076 | None:intergenic | 30.0% |
| AATTATTCTGTGAATAGGTG+CGG | - | chr7_4:57716249-57716268 | Msa1165750:intron | 30.0% | |
| GGGGATTAAAGTTAGAAAAA+TGG | + | chr7_4:57716379-57716398 | None:intergenic | 30.0% | |
| CCAACAAGTATAGTTAAATG+GGG | + | chr7_4:57716398-57716417 | None:intergenic | 30.0% | |
| GCCAACAAGTATAGTTAAAT+GGG | + | chr7_4:57716399-57716418 | None:intergenic | 30.0% | |
| AACTTCTTTGGTTGAAGATT+AGG | - | chr7_4:57716455-57716474 | Msa1165750:intron | 30.0% | |
| TAATACTTCACATCTTCAGA+GGG | + | chr7_4:57716633-57716652 | None:intergenic | 30.0% | |
| ATAATACTTCACATCTTCAG+AGG | + | chr7_4:57716634-57716653 | None:intergenic | 30.0% | |
| ! | CTGAAGATGTGAAGTATTAT+TGG | - | chr7_4:57716634-57716653 | Msa1165750:intron | 30.0% |
| AGCTAATAGACCTATTGATA+AGG | - | chr7_4:57716695-57716714 | Msa1165750:intron | 30.0% | |
| ! | GATACCATGCTTTCAAATTT+TGG | - | chr7_4:57716764-57716783 | Msa1165750:intron | 30.0% |
| ACATCCAAAATTTGAAAGCA+TGG | + | chr7_4:57716771-57716790 | None:intergenic | 30.0% | |
| !! | ACTGTGATTTTGACACAATT+TGG | - | chr7_4:57717097-57717116 | Msa1165750:intron | 30.0% |
| AAAAGGCTATGAAACATATC+AGG | - | chr7_4:57717185-57717204 | Msa1165750:intron | 30.0% | |
| !! | TTCTAAGGTACATATCATAG+TGG | - | chr7_4:57717253-57717272 | Msa1165750:intron | 30.0% |
| ! | GAAGTATTAAACACATTGCA+GGG | + | chr7_4:57717286-57717305 | None:intergenic | 30.0% |
| ACAACTGAAATGGATATACA+TGG | + | chr7_4:57717336-57717355 | None:intergenic | 30.0% | |
| TCCAGATGAAGTAAATTTGA+TGG | - | chr7_4:57717715-57717734 | Msa1165750:intron | 30.0% | |
| TCCATCAAATTTACTTCATC+TGG | + | chr7_4:57717719-57717738 | None:intergenic | 30.0% | |
| GAAGTAAATTTGATGGAAGA+TGG | - | chr7_4:57717722-57717741 | Msa1165750:intron | 30.0% | |
| TTCCTAATGTGACTTTGATT+TGG | - | chr7_4:57717775-57717794 | Msa1165750:intron | 30.0% | |
| ! | TCCTAATGTGACTTTGATTT+GGG | - | chr7_4:57717776-57717795 | Msa1165750:intron | 30.0% |
| !! | TTGATTTGGGATTATGGAAA+AGG | - | chr7_4:57717789-57717808 | Msa1165750:intron | 30.0% |
| TATACAGCAAAATGAACCTA+GGG | + | chr7_4:57717862-57717881 | None:intergenic | 30.0% | |
| TTATACAGCAAAATGAACCT+AGG | + | chr7_4:57717863-57717882 | None:intergenic | 30.0% | |
| TGTGACAAAATTTCTATGAG+GGG | + | chr7_4:57717973-57717992 | None:intergenic | 30.0% | |
| GTGTGACAAAATTTCTATGA+GGG | + | chr7_4:57717974-57717993 | None:intergenic | 30.0% | |
| AGTGTGACAAAATTTCTATG+AGG | + | chr7_4:57717975-57717994 | None:intergenic | 30.0% | |
| TAAATAAAACTGAACCAACC+AGG | + | chr7_4:57718200-57718219 | None:intergenic | 30.0% | |
| AATAGAAGTCTGTCGATAAT+AGG | - | chr7_4:57718477-57718496 | Msa1165750:intron | 30.0% | |
| AAACAGCTATTGTTCTTACT+TGG | - | chr7_4:57718551-57718570 | Msa1165750:intron | 30.0% | |
| AAGGTTACAAGTCTACAATA+CGG | - | chr7_4:57718782-57718801 | Msa1165750:intron | 30.0% | |
| CAACATAAAAAGAAAAAGCG+AGG | + | chr7_4:57719010-57719029 | None:intergenic | 30.0% | |
| AACACTACATAAAACTCAGT+CGG | + | chr7_4:57719097-57719116 | None:intergenic | 30.0% | |
| GAATATTTGGATCAAACTCA+AGG | + | chr7_4:57719652-57719671 | None:intergenic | 30.0% | |
| GTTTGATCCAAATATTCTCA+AGG | - | chr7_4:57719655-57719674 | Msa1165750:intron | 30.0% | |
| AATTGGTTGTGATATGTTGA+CGG | + | chr7_4:57720004-57720023 | None:intergenic | 30.0% | |
| AAACTTTACGGTTACACTAA+TGG | - | chr7_4:57720044-57720063 | Msa1165750:intron | 30.0% | |
| ! | GGGTTTATGTATGTTTCTAA+AGG | - | chr7_4:57720106-57720125 | Msa1165750:intron | 30.0% |
| ! | TATGTTTCTAAAGGGTAGTA+TGG | - | chr7_4:57720115-57720134 | Msa1165750:intron | 30.0% |
| TATTGTAACTTCAGTGTATG+AGG | - | chr7_4:57720245-57720264 | Msa1165750:intron | 30.0% | |
| AATCATTAAGAATGTGGAAG+AGG | - | chr7_4:57720269-57720288 | Msa1165750:intron | 30.0% | |
| !! | AAAACTGAAAGAGCATTAGT+TGG | + | chr7_4:57720342-57720361 | None:intergenic | 30.0% |
| TCAAGTTATATACTTCGCAC+GGG | - | chr7_4:57715892-57715911 | Msa1165750:CDS | 35.0% | |
| CTTCGTAAATTTGAGAACGA+AGG | - | chr7_4:57715983-57716002 | Msa1165750:intron | 35.0% | |
| AATCCGAATATTTGTGATGG+TGG | - | chr7_4:57716012-57716031 | Msa1165750:intron | 35.0% | |
| GATCCACCATCACAAATATT+CGG | + | chr7_4:57716018-57716037 | None:intergenic | 35.0% | |
| GAAGAATGACATGTAATTGG+AGG | + | chr7_4:57716202-57716221 | None:intergenic | 35.0% | |
| CCCCATTTAACTATACTTGT+TGG | - | chr7_4:57716395-57716414 | Msa1165750:intron | 35.0% | |
| GGCCAACAAGTATAGTTAAA+TGG | + | chr7_4:57716400-57716419 | None:intergenic | 35.0% | |
| TACTTTGTATCTTCAGACGT+CGG | - | chr7_4:57716488-57716507 | Msa1165750:intron | 35.0% | |
| ! | TTTAGAAGCACATACCATTG+GGG | + | chr7_4:57716571-57716590 | None:intergenic | 35.0% |
| ! | GTTTAGAAGCACATACCATT+GGG | + | chr7_4:57716572-57716591 | None:intergenic | 35.0% |
| ! | AGTTTAGAAGCACATACCAT+TGG | + | chr7_4:57716573-57716592 | None:intergenic | 35.0% |
| CACGTTCTTACCTTATCAAT+AGG | + | chr7_4:57716708-57716727 | None:intergenic | 35.0% | |
| ATCTGTATTCAGTGCACATT+AGG | - | chr7_4:57716732-57716751 | Msa1165750:intron | 35.0% | |
| GCTATGAAACATATCAGGAA+GGG | - | chr7_4:57717190-57717209 | Msa1165750:intron | 35.0% | |
| !! | GGAAGTATTAAACACATTGC+AGG | + | chr7_4:57717287-57717306 | None:intergenic | 35.0% |
| ATATCCATTTCAGTTGTGTG+AGG | - | chr7_4:57717339-57717358 | Msa1165750:intron | 35.0% | |
| CAAATTAATAGAACCAGTCG+TGG | - | chr7_4:57717362-57717381 | Msa1165750:intron | 35.0% | |
| TGAAAGATGTTCTGTATCTC+TGG | + | chr7_4:57717525-57717544 | None:intergenic | 35.0% | |
| !!! | AGACAGGTTTGCTTTTTTCT+TGG | - | chr7_4:57717558-57717577 | Msa1165750:intron | 35.0% |
| TGATTTCCAGGAAAATCCTA+AGG | - | chr7_4:57717623-57717642 | Msa1165750:intron | 35.0% | |
| TTACTTCATCTGGACAATTC+CGG | + | chr7_4:57717709-57717728 | None:intergenic | 35.0% | |
| TCCCAAATCAAAGTCACATT+AGG | + | chr7_4:57717780-57717799 | None:intergenic | 35.0% | |
| !! | GTGACTTTGATTTGGGATTA+TGG | - | chr7_4:57717783-57717802 | Msa1165750:intron | 35.0% |
| AAAGGAGAGCAACTCTAATT+TGG | - | chr7_4:57717807-57717826 | Msa1165750:intron | 35.0% | |
| ATACAGCAAAATGAACCTAG+GGG | + | chr7_4:57717861-57717880 | None:intergenic | 35.0% | |
| AACACCACTACATTCCAATA+CGG | - | chr7_4:57718097-57718116 | Msa1165750:intron | 35.0% | |
| ATTACCGTATTGGAATGTAG+TGG | + | chr7_4:57718104-57718123 | None:intergenic | 35.0% | |
| TTCCTTATCCCGATATCATA+AGG | - | chr7_4:57718318-57718337 | Msa1165750:intron | 35.0% | |
| AACCTTATGATATCGGGATA+AGG | + | chr7_4:57718323-57718342 | None:intergenic | 35.0% | |
| CTGAGTAACCTTATGATATC+GGG | + | chr7_4:57718329-57718348 | None:intergenic | 35.0% | |
| CCTGAGTAACCTTATGATAT+CGG | + | chr7_4:57718330-57718349 | None:intergenic | 35.0% | |
| CGATATCATAAGGTTACTCA+GGG | - | chr7_4:57718328-57718347 | Msa1165750:intron | 35.0% | |
| ! | TAACCCTTGTATTTAGAGCT+GGG | - | chr7_4:57718506-57718525 | Msa1165750:intron | 35.0% |
| CTTGGTACTAAGTTCATTTG+CGG | - | chr7_4:57718569-57718588 | Msa1165750:intron | 35.0% | |
| TTGGTACTAAGTTCATTTGC+GGG | - | chr7_4:57718570-57718589 | Msa1165750:intron | 35.0% | |
| ! | TTTGCGGGGAAAAAGTTTTA+TGG | - | chr7_4:57718585-57718604 | Msa1165750:intron | 35.0% |
| TGCTAATCGCTGTCATAATT+AGG | + | chr7_4:57718710-57718729 | None:intergenic | 35.0% | |
| ACTTGTAACCTTATACACAG+GGG | + | chr7_4:57718774-57718793 | None:intergenic | 35.0% | |
| GACTTGTAACCTTATACACA+GGG | + | chr7_4:57718775-57718794 | None:intergenic | 35.0% | |
| AGACTTGTAACCTTATACAC+AGG | + | chr7_4:57718776-57718795 | None:intergenic | 35.0% | |
| AAATGATTGACCCAAGTAAC+AGG | + | chr7_4:57719041-57719060 | None:intergenic | 35.0% | |
| TATTTGACAGTCGAGATTAG+AGG | - | chr7_4:57719184-57719203 | Msa1165750:intron | 35.0% | |
| AAGAGTTCTTTCCGATTCTT+TGG | + | chr7_4:57719356-57719375 | None:intergenic | 35.0% | |
| AATATCCAACAGTTGGTTGT+TGG | + | chr7_4:57719458-57719477 | None:intergenic | 35.0% | |
| TGACGAACCTTGAGAATATT+TGG | + | chr7_4:57719665-57719684 | None:intergenic | 35.0% | |
| AAGCTGTAAGAATGAAGAGT+TGG | - | chr7_4:57719687-57719706 | Msa1165750:intron | 35.0% | |
| CAAAATGCATGTGCATTATG+TGG | - | chr7_4:57719730-57719749 | Msa1165750:intron | 35.0% | |
| TCACTGTAAAACACGTCAAA+AGG | + | chr7_4:57719760-57719779 | None:intergenic | 35.0% | |
| ! | CGTGTTTTACAGTGATGAAA+TGG | - | chr7_4:57719765-57719784 | Msa1165750:intron | 35.0% |
| ! | GTTTTACAGTGATGAAATGG+AGG | - | chr7_4:57719768-57719787 | Msa1165750:intron | 35.0% |
| !! | AACCTTAGTTTCTGAAGCAA+TGG | + | chr7_4:57719846-57719865 | None:intergenic | 35.0% |
| TCACAAAAACCTTAGGATCA+GGG | - | chr7_4:57719875-57719894 | Msa1165750:intron | 35.0% | |
| ! | CAGCTGATTTAGTGAATGAT+AGG | - | chr7_4:57720193-57720212 | Msa1165750:intron | 35.0% |
| TGAGGCAATCATTAAGAATG+TGG | - | chr7_4:57720263-57720282 | Msa1165750:intron | 35.0% | |
| ! | TGTTGTTTAGATTGAGCCCT+TGG | - | chr7_4:57715429-57715448 | Msa1165750:intron | 40.0% |
| GATTGAGCCCTTGGTAAATT+AGG | - | chr7_4:57715438-57715457 | Msa1165750:intron | 40.0% | |
| TTTGGTTGTGTTTGTGATGC+AGG | - | chr7_4:57715666-57715685 | Msa1165750:intron | 40.0% | |
| TTGGTTGTGTTTGTGATGCA+GGG | - | chr7_4:57715667-57715686 | Msa1165750:intron | 40.0% | |
| !! | TTGTGATGGTGGATCTGAAT+AGG | - | chr7_4:57716023-57716042 | Msa1165750:intron | 40.0% |
| !! | ATGGTGGATCTGAATAGGTT+TGG | - | chr7_4:57716028-57716047 | Msa1165750:intron | 40.0% |
| TAGGTGCGGACAAAGTTATT+TGG | - | chr7_4:57716263-57716282 | Msa1165750:intron | 40.0% | |
| AGGTGCGGACAAAGTTATTT+GGG | - | chr7_4:57716264-57716283 | Msa1165750:intron | 40.0% | |
| CTCTGCTATACCAGTATAAC+AGG | + | chr7_4:57716318-57716337 | None:intergenic | 40.0% | |
| !! | GAAGCTGACTTGAACTTCTT+TGG | - | chr7_4:57716443-57716462 | Msa1165750:intron | 40.0% |
| ! | TTAGAAGCACATACCATTGG+GGG | + | chr7_4:57716570-57716589 | None:intergenic | 40.0% |
| TAAGAGCCGTCTGCAAAAAA+AGG | - | chr7_4:57716866-57716885 | Msa1165750:intron | 40.0% | |
| CTACTGCACATAAGCTTGTA+AGG | + | chr7_4:57716976-57716995 | None:intergenic | 40.0% | |
| ! | AGAATCGAGTCGTTTGAAGT+TGG | - | chr7_4:57716998-57717017 | Msa1165750:intron | 40.0% |
| GGCTATGAAACATATCAGGA+AGG | - | chr7_4:57717189-57717208 | Msa1165750:intron | 40.0% | |
| GAAACATGATGCAAACAACC+AGG | - | chr7_4:57717215-57717234 | Msa1165750:intron | 40.0% | |
| AACAACCAGGAATTGCTTGA+AGG | - | chr7_4:57717228-57717247 | Msa1165750:intron | 40.0% | |
| ACAACCAGGAATTGCTTGAA+GGG | - | chr7_4:57717229-57717248 | Msa1165750:intron | 40.0% | |
| AATTGCTTGAAGGGGTTCTA+AGG | - | chr7_4:57717238-57717257 | Msa1165750:intron | 40.0% | |
| ! | CATGATTTGCAGCCAAAAAC+TGG | + | chr7_4:57717308-57717327 | None:intergenic | 40.0% |
| TTTGCCTCACACAACTGAAA+TGG | + | chr7_4:57717346-57717365 | None:intergenic | 40.0% | |
| TGTAACTCCTGAAGAGTTGA+AGG | - | chr7_4:57717388-57717407 | Msa1165750:intron | 40.0% | |
| GATGTTCTGTATCTCTGGAT+CGG | + | chr7_4:57717520-57717539 | None:intergenic | 40.0% | |
| AGCAAACCTGTCTCATAACA+GGG | + | chr7_4:57717551-57717570 | None:intergenic | 40.0% | |
| AAGCAAACCTGTCTCATAAC+AGG | + | chr7_4:57717552-57717571 | None:intergenic | 40.0% | |
| !!! | TGCTTTTTTCTTGGCTGCAT+TGG | - | chr7_4:57717567-57717586 | Msa1165750:intron | 40.0% |
| !! | CTTGGCTGCATTGGTTATAA+TGG | - | chr7_4:57717576-57717595 | Msa1165750:intron | 40.0% |
| ! | TTTTGTAGGCAACGTCAAGT+TGG | - | chr7_4:57718155-57718174 | Msa1165750:intron | 40.0% |
| CCGATATCATAAGGTTACTC+AGG | - | chr7_4:57718327-57718346 | Msa1165750:intron | 40.0% | |
| ATTTGGCCTACAGCTAGAAT+GGG | + | chr7_4:57718398-57718417 | None:intergenic | 40.0% | |
| TATTTGGCCTACAGCTAGAA+TGG | + | chr7_4:57718399-57718418 | None:intergenic | 40.0% | |
| AGTCTGTCGATAATAGGCAA+AGG | - | chr7_4:57718483-57718502 | Msa1165750:intron | 40.0% | |
| ! | GTAACCCTTGTATTTAGAGC+TGG | - | chr7_4:57718505-57718524 | Msa1165750:intron | 40.0% |
| ! | AACCCTTGTATTTAGAGCTG+GGG | - | chr7_4:57718507-57718526 | Msa1165750:intron | 40.0% |
| TGGTACTAAGTTCATTTGCG+GGG | - | chr7_4:57718571-57718590 | Msa1165750:intron | 40.0% | |
| ! | GCTTCGAAAAGTGGTTCTTT+TGG | + | chr7_4:57718875-57718894 | None:intergenic | 40.0% |
| TCACTTTCAGCTTCGAAAAG+TGG | + | chr7_4:57718884-57718903 | None:intergenic | 40.0% | |
| TTGCTTTCTGACCTGTTACT+TGG | - | chr7_4:57719027-57719046 | Msa1165750:intron | 40.0% | |
| ! | TGCTTTCTGACCTGTTACTT+GGG | - | chr7_4:57719028-57719047 | Msa1165750:intron | 40.0% |
| TTCTTTCCGATTCTTTGGTC+TGG | + | chr7_4:57719351-57719370 | None:intergenic | 40.0% | |
| GATTCAGATGAGGTAGAATC+TGG | + | chr7_4:57719416-57719435 | None:intergenic | 40.0% | |
| ATTCTACCTCATCTGAATCC+TGG | - | chr7_4:57719417-57719436 | Msa1165750:intron | 40.0% | |
| ACCCAATGAGATAACACCTT+GGG | + | chr7_4:57719505-57719524 | None:intergenic | 40.0% | |
| TACCCAATGAGATAACACCT+TGG | + | chr7_4:57719506-57719525 | None:intergenic | 40.0% | |
| TTGATTTAGTTACCTCCGCA+GGG | + | chr7_4:57719536-57719555 | None:intergenic | 40.0% | |
| ! | ATTGATTTAGTTACCTCCGC+AGG | + | chr7_4:57719537-57719556 | None:intergenic | 40.0% |
| !! | ACATGCATTTTGATCCTCGT+CGG | + | chr7_4:57719722-57719741 | None:intergenic | 40.0% |
| !! | TAGTTTCTGAAGCAATGGAG+TGG | + | chr7_4:57719841-57719860 | None:intergenic | 40.0% |
| CTCCATTGCTTCAGAAACTA+AGG | - | chr7_4:57719841-57719860 | Msa1165750:intron | 40.0% | |
| CTGTGAGTCACAAAAACCTT+AGG | - | chr7_4:57719868-57719887 | Msa1165750:intron | 40.0% | |
| GTCACAAAAACCTTAGGATC+AGG | - | chr7_4:57719874-57719893 | Msa1165750:intron | 40.0% | |
| ATCCAAATGTGTCTCCAGAA+TGG | - | chr7_4:57719917-57719936 | Msa1165750:intron | 40.0% | |
| ! | TACCATTCTGGAGACACATT+TGG | + | chr7_4:57719922-57719941 | None:intergenic | 40.0% |
| AGTGGCAAACTTTACCATTC+TGG | + | chr7_4:57719934-57719953 | None:intergenic | 40.0% | |
| ACAACCAATTAACGATCCGA+TGG | - | chr7_4:57720014-57720033 | Msa1165750:intron | 40.0% | |
| TACACCATCGGATCGTTAAT+TGG | + | chr7_4:57720021-57720040 | None:intergenic | 40.0% | |
| ATTGAGGAAATGGAGGAGTT+TGG | - | chr7_4:57720147-57720166 | Msa1165750:intron | 40.0% | |
| TTGAGGAAATGGAGGAGTTT+GGG | - | chr7_4:57720148-57720167 | Msa1165750:intron | 40.0% | |
| TGTTTGTGATGCAGGGATTG+TGG | - | chr7_4:57715674-57715693 | Msa1165750:intron | 45.0% | |
| GTTACAAAGTACGCGATGAC+TGG | + | chr7_4:57716138-57716157 | None:intergenic | 45.0% | |
| GGTGCGGACAAAGTTATTTG+GGG | - | chr7_4:57716265-57716284 | Msa1165750:intron | 45.0% | |
| GGCAACAGAAGCTACATACT+CGG | - | chr7_4:57716286-57716305 | Msa1165750:intron | 45.0% | |
| GCAACAGAAGCTACATACTC+GGG | - | chr7_4:57716287-57716306 | Msa1165750:intron | 45.0% | |
| TCGGGCTATACCTGTTATAC+TGG | - | chr7_4:57716305-57716324 | Msa1165750:intron | 45.0% | |
| TGTGCCACCTGACATTGAAT+CGG | - | chr7_4:57716340-57716359 | Msa1165750:intron | 45.0% | |
| CACCTGACATTGAATCGGTT+GGG | - | chr7_4:57716345-57716364 | Msa1165750:intron | 45.0% | |
| ATTGAATCGGTTGGGTGAGT+TGG | - | chr7_4:57716353-57716372 | Msa1165750:intron | 45.0% | |
| !! | TCGTTTGAAGTTGGTGCACT+TGG | - | chr7_4:57717007-57717026 | Msa1165750:intron | 45.0% |
| CAACCAGGAATTGCTTGAAG+GGG | - | chr7_4:57717230-57717249 | Msa1165750:intron | 45.0% | |
| TGTCTCTCCTTCAACTCTTC+AGG | + | chr7_4:57717398-57717417 | None:intergenic | 45.0% | |
| TGAAGAGTTGAAGGAGAGAC+AGG | - | chr7_4:57717397-57717416 | Msa1165750:intron | 45.0% | |
| TCAAGACCCTGTTATGAGAC+AGG | - | chr7_4:57717542-57717561 | Msa1165750:intron | 45.0% | |
| !! | GCTGCATTGGTTATAATGGC+TGG | - | chr7_4:57717580-57717599 | Msa1165750:intron | 45.0% |
| !! | TAATGGCTGGCTTTGTATGC+AGG | - | chr7_4:57717593-57717612 | Msa1165750:intron | 45.0% |
| !! | CTGGCTTTGTATGCAGGTAT+TGG | - | chr7_4:57717599-57717618 | Msa1165750:intron | 45.0% |
| !! | GCAGGTATTGGTTGATTTCC+AGG | - | chr7_4:57717611-57717630 | Msa1165750:intron | 45.0% |
| ACAGGAACATACCAAGATCC+CGG | - | chr7_4:57717650-57717669 | Msa1165750:intron | 45.0% | |
| ATCCAAAAGCTGATCAGTGC+CGG | - | chr7_4:57717687-57717706 | Msa1165750:intron | 45.0% | |
| TATGCGAGCTGATATTCTCC+TGG | - | chr7_4:57718179-57718198 | Msa1165750:intron | 45.0% | |
| TTTCATGTGCAGGTAAAGCC+CGG | - | chr7_4:57718293-57718312 | Msa1165750:intron | 45.0% | |
| ATATCGGGATAAGGAAGACC+GGG | + | chr7_4:57718314-57718333 | None:intergenic | 45.0% | |
| GATATCGGGATAAGGAAGAC+CGG | + | chr7_4:57718315-57718334 | None:intergenic | 45.0% | |
| ! | CTCTTACCCATTCTAGCTGT+AGG | - | chr7_4:57718389-57718408 | Msa1165750:intron | 45.0% |
| !! | TGCCCCAGCTCTAAATACAA+GGG | + | chr7_4:57718512-57718531 | None:intergenic | 45.0% |
| !! | TTGCCCCAGCTCTAAATACA+AGG | + | chr7_4:57718513-57718532 | None:intergenic | 45.0% |
| ! | GAGCTGGGGCAAAAGTTTTA+TGG | - | chr7_4:57718521-57718540 | Msa1165750:intron | 45.0% |
| !!! | TTTTGGTGCCCCTGTGTATA+AGG | - | chr7_4:57718763-57718782 | Msa1165750:intron | 45.0% |
| GGAATAACAGGTCGTGCATT+TGG | + | chr7_4:57719318-57719337 | None:intergenic | 45.0% | |
| GGCATAGGAAGTGGAATAAC+AGG | + | chr7_4:57719330-57719349 | None:intergenic | 45.0% | |
| CCTATGCCAGACCAAAGAAT+CGG | - | chr7_4:57719342-57719361 | Msa1165750:intron | 45.0% | |
| ! | AGAATCTGGAGTAGAGCATG+TGG | + | chr7_4:57719402-57719421 | None:intergenic | 45.0% |
| TTAGGACCAGGATTCAGATG+AGG | + | chr7_4:57719426-57719445 | None:intergenic | 45.0% | |
| TCAAGCCAACAACCAACTGT+TGG | - | chr7_4:57719450-57719469 | Msa1165750:intron | 45.0% | |
| ATTAGTTCACTCATGGCCCA+AGG | - | chr7_4:57719486-57719505 | Msa1165750:intron | 45.0% | |
| ! | GCCCAAGGTGTTATCTCATT+GGG | - | chr7_4:57719501-57719520 | Msa1165750:intron | 45.0% |
| TGATTTAGTTACCTCCGCAG+GGG | + | chr7_4:57719535-57719554 | None:intergenic | 45.0% | |
| ACGCAGTCAAGCAAAATGGA+AGG | + | chr7_4:57719588-57719607 | None:intergenic | 45.0% | |
| TGGTACGCAGTCAAGCAAAA+TGG | + | chr7_4:57719592-57719611 | None:intergenic | 45.0% | |
| ACAGTGATGAAATGGAGGAC+TGG | - | chr7_4:57719773-57719792 | Msa1165750:intron | 45.0% | |
| ! | GTATACCTTAAAGCGCCTAC+AGG | - | chr7_4:57719811-57719830 | Msa1165750:intron | 45.0% |
| TAAAGGGTAGTATGGCAGCA+GGG | - | chr7_4:57720123-57720142 | Msa1165750:intron | 45.0% | |
| TGTGGAAGAGGAACAGAAGA+TGG | - | chr7_4:57720281-57720300 | Msa1165750:intron | 45.0% | |
| AGGAACAGAAGATGGAAGTG+TGG | - | chr7_4:57720289-57720308 | Msa1165750:intron | 45.0% | |
| !!! | AATTGTTTTATTATTAAAAT+TGG | - | chr7_4:57715776-57715795 | Msa1165750:intron | 5.0% |
| ATAGGTTTGGCACCCTAGAG+AGG | - | chr7_4:57716041-57716060 | Msa1165750:CDS | 50.0% | |
| ! | CCAACCGATTCAATGTCAGG+TGG | + | chr7_4:57716347-57716366 | None:intergenic | 50.0% |
| CCACCTGACATTGAATCGGT+TGG | - | chr7_4:57716344-57716363 | Msa1165750:intron | 50.0% | |
| ! | CACCCAACCGATTCAATGTC+AGG | + | chr7_4:57716350-57716369 | None:intergenic | 50.0% |
| !! | TCGGTGCTGGAAAGATGCAA+TGG | - | chr7_4:57716507-57716526 | Msa1165750:intron | 50.0% |
| GCATTTCACCAAGAACCTGC+AGG | - | chr7_4:57716533-57716552 | Msa1165750:intron | 50.0% | |
| TTTCACCAAGAACCTGCAGG+AGG | - | chr7_4:57716536-57716555 | Msa1165750:intron | 50.0% | |
| ACGTGTTAGACAGCAGGTGT+GGG | - | chr7_4:57717043-57717062 | Msa1165750:intron | 50.0% | |
| GAACCCCTTCAAGCAATTCC+TGG | + | chr7_4:57717236-57717255 | None:intergenic | 50.0% | |
| AGGAGTTACATCTCCACGAC+TGG | + | chr7_4:57717378-57717397 | None:intergenic | 50.0% | |
| ! | GTGCAGCCTTAGGATTTTCC+TGG | + | chr7_4:57717632-57717651 | None:intergenic | 50.0% |
| GGAAAATCCTAAGGCTGCAC+AGG | - | chr7_4:57717632-57717651 | Msa1165750:intron | 50.0% | |
| GTATGTTCCTGTGCAGCCTT+AGG | + | chr7_4:57717642-57717661 | None:intergenic | 50.0% | |
| CAGGAACATACCAAGATCCC+GGG | - | chr7_4:57717651-57717670 | Msa1165750:intron | 50.0% | |
| TGGATCTTGTCCATCACACC+CGG | + | chr7_4:57717672-57717691 | None:intergenic | 50.0% | |
| !!! | TTCCGGCACTGATCAGCTTT+TGG | + | chr7_4:57717692-57717711 | None:intergenic | 50.0% |
| CAGCAAAATGAACCTAGGGG+TGG | + | chr7_4:57717858-57717877 | None:intergenic | 50.0% | |
| ! | GAGGGGATCGCTGCATTTTA+CGG | + | chr7_4:57717956-57717975 | None:intergenic | 50.0% |
| GAATGTAGTGGTGTTCGCAC+GGG | + | chr7_4:57718092-57718111 | None:intergenic | 50.0% | |
| GGAATGTAGTGGTGTTCGCA+CGG | + | chr7_4:57718093-57718112 | None:intergenic | 50.0% | |
| CGAGCTGATATTCTCCTGGT+TGG | - | chr7_4:57718183-57718202 | Msa1165750:intron | 50.0% | |
| !! | GAATGGGTAAGAGAAGCACC+TGG | + | chr7_4:57718382-57718401 | None:intergenic | 50.0% |
| AACAGGTCGTGCATTTGGCA+GGG | + | chr7_4:57719313-57719332 | None:intergenic | 50.0% | |
| TAACAGGTCGTGCATTTGGC+AGG | + | chr7_4:57719314-57719333 | None:intergenic | 50.0% | |
| CTTTGGTCTGGCATAGGAAG+TGG | + | chr7_4:57719339-57719358 | None:intergenic | 50.0% | |
| CCGATTCTTTGGTCTGGCAT+AGG | + | chr7_4:57719345-57719364 | None:intergenic | 50.0% | |
| !! | GGTTGTTGGCTTGACGCATT+AGG | + | chr7_4:57719444-57719463 | None:intergenic | 50.0% |
| ! | GGCCCAAGGTGTTATCTCAT+TGG | - | chr7_4:57719500-57719519 | Msa1165750:intron | 50.0% |
| ATTGGGTAATCAACCCCCTG+CGG | - | chr7_4:57719518-57719537 | Msa1165750:intron | 50.0% | |
| GATTTAGTTACCTCCGCAGG+GGG | + | chr7_4:57719534-57719553 | None:intergenic | 50.0% | |
| !! | GCATTTTGATCCTCGTCGGA+CGG | + | chr7_4:57719718-57719737 | None:intergenic | 50.0% |
| GCAAACCTGTAGGCGCTTTA+AGG | + | chr7_4:57719819-57719838 | None:intergenic | 50.0% | |
| CAATGGAGTGGCAAACCTGT+AGG | + | chr7_4:57719829-57719848 | None:intergenic | 50.0% | |
| ! | CAGCTTTAGCCCTGATCCTA+AGG | + | chr7_4:57719887-57719906 | None:intergenic | 50.0% |
| CTAAAGGGTAGTATGGCAGC+AGG | - | chr7_4:57720122-57720141 | Msa1165750:intron | 50.0% | |
| AGTATGGCAGCAGGGAATTG+AGG | - | chr7_4:57720131-57720150 | Msa1165750:intron | 50.0% | |
| GCAGCAGGGAATTGAGGAAA+TGG | - | chr7_4:57720137-57720156 | Msa1165750:intron | 50.0% | |
| GCAGGGAATTGAGGAAATGG+AGG | - | chr7_4:57720140-57720159 | Msa1165750:intron | 50.0% | |
| GGAAATGGAGGAGTTTGGGA+TGG | - | chr7_4:57720152-57720171 | Msa1165750:intron | 50.0% | |
| AGTGAATGATAGGCTCCCAG+AGG | - | chr7_4:57720203-57720222 | Msa1165750:intron | 50.0% | |
| TTGCTGCATCTCTTGCCTCT+GGG | + | chr7_4:57720221-57720240 | None:intergenic | 50.0% | |
| GTATCTTCAGACGTCGGTGC+TGG | - | chr7_4:57716494-57716513 | Msa1165750:intron | 55.0% | |
| CAACACCTCCTGCAGGTTCT+TGG | + | chr7_4:57716544-57716563 | None:intergenic | 55.0% | |
| !! | GGAGGTGTTGATACCCCCAA+TGG | - | chr7_4:57716554-57716573 | Msa1165750:intron | 55.0% |
| GTGCACTTGGAGCAAGAGCT+CGG | - | chr7_4:57717020-57717039 | Msa1165750:intron | 55.0% | |
| GACGTGTTAGACAGCAGGTG+TGG | - | chr7_4:57717042-57717061 | Msa1165750:intron | 55.0% | |
| CGTGTTAGACAGCAGGTGTG+GGG | - | chr7_4:57717044-57717063 | Msa1165750:intron | 55.0% | |
| ACAGCAGGTGTGGGGAAGAT+GGG | - | chr7_4:57717052-57717071 | Msa1165750:intron | 55.0% | |
| TACCAAGATCCCGGGTGTGA+TGG | - | chr7_4:57717659-57717678 | Msa1165750:intron | 55.0% | |
| GGATCTTGTCCATCACACCC+GGG | + | chr7_4:57717671-57717690 | None:intergenic | 55.0% | |
| GTATGCTGCAACTGGCAGTG+GGG | + | chr7_4:57718360-57718379 | None:intergenic | 55.0% | |
| GGTATGCTGCAACTGGCAGT+GGG | + | chr7_4:57718361-57718380 | None:intergenic | 55.0% | |
| TGGTATGCTGCAACTGGCAG+TGG | + | chr7_4:57718362-57718381 | None:intergenic | 55.0% | |
| ACTGCCAGTTGCAGCATACC+AGG | - | chr7_4:57718361-57718380 | Msa1165750:intron | 55.0% | |
| AGCACCTGGTATGCTGCAAC+TGG | + | chr7_4:57718368-57718387 | None:intergenic | 55.0% | |
| ACAGGTCGTGCATTTGGCAG+GGG | + | chr7_4:57719312-57719331 | None:intergenic | 55.0% | |
| TTCCGACCTTTACCTCCAGC+TGG | - | chr7_4:57719375-57719394 | Msa1165750:intron | 55.0% | |
| TCCGACCTTTACCTCCAGCT+GGG | - | chr7_4:57719376-57719395 | Msa1165750:intron | 55.0% | |
| TGGCTTGACGCATTAGGACC+AGG | + | chr7_4:57719438-57719457 | None:intergenic | 55.0% | |
| ATGGAGGACTGGATGTGCAG+AGG | - | chr7_4:57719784-57719803 | Msa1165750:intron | 55.0% | |
| CTTGCTGCATCTCTTGCCTC+TGG | + | chr7_4:57720222-57720241 | None:intergenic | 55.0% | |
| ! | GGGGTATCAACACCTCCTGC+AGG | + | chr7_4:57716551-57716570 | None:intergenic | 60.0% |
| GCTCGGACGTGTTAGACAGC+AGG | - | chr7_4:57717037-57717056 | Msa1165750:intron | 60.0% | |
| GACAGCAGGTGTGGGGAAGA+TGG | - | chr7_4:57717051-57717070 | Msa1165750:intron | 60.0% | |
| GTCCATCACACCCGGGATCT+TGG | + | chr7_4:57717664-57717683 | None:intergenic | 60.0% | |
| AACCTAGGGGTGGCGCTTAG+GGG | + | chr7_4:57717848-57717867 | None:intergenic | 60.0% | |
| GAACCTAGGGGTGGCGCTTA+GGG | + | chr7_4:57717849-57717868 | None:intergenic | 60.0% | |
| TGAACCTAGGGGTGGCGCTT+AGG | + | chr7_4:57717850-57717869 | None:intergenic | 60.0% | |
| CAGGTCGTGCATTTGGCAGG+GGG | + | chr7_4:57719311-57719330 | None:intergenic | 60.0% | |
| GCCCAGCTGGAGGTAAAGGT+CGG | + | chr7_4:57719380-57719399 | None:intergenic | 60.0% | |
| TGTGGCCCAGCTGGAGGTAA+AGG | + | chr7_4:57719384-57719403 | None:intergenic | 60.0% | |
| AGTAGAGCATGTGGCCCAGC+TGG | + | chr7_4:57719393-57719412 | None:intergenic | 60.0% | |
| GTTGGAAGTTCCGTCCGACG+AGG | - | chr7_4:57719705-57719724 | Msa1165750:intron | 60.0% | |
| AGAGCATGTGGCCCAGCTGG+AGG | + | chr7_4:57719390-57719409 | None:intergenic | 65.0% | |
| GGGTAATCAACCCCCTGCGG+AGG | - | chr7_4:57719521-57719540 | Msa1165750:intron | 65.0% | |
| GGCGCTTAGGGGTGGCGCTT+TGG | + | chr7_4:57717837-57717856 | None:intergenic | 70.0% | |
| CTAGGGGTGGCGCTTAGGGG+TGG | + | chr7_4:57717845-57717864 | None:intergenic | 70.0% | |
| CACCCCTAAGCGCCACCCCT+AGG | - | chr7_4:57717843-57717862 | Msa1165750:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 57715194 | 57720380 | 57715194 | ID=Msa1165750;Name=Msa1165750 |
| chr7_4 | mRNA | 57715194 | 57720380 | 57715194 | ID=Msa1165750-mRNA-1;Parent=Msa1165750;Name=Msa1165750-mRNA-1;_AED=0.44;_eAED=0.59;_QI=0|0|0|0.25|1|1|8|0|291 |
| chr7_4 | exon | 57720375 | 57720380 | 57720375 | ID=Msa1165750-mRNA-1:exon:17537;Parent=Msa1165750-mRNA-1 |
| chr7_4 | exon | 57720232 | 57720255 | 57720232 | ID=Msa1165750-mRNA-1:exon:17536;Parent=Msa1165750-mRNA-1 |
| chr7_4 | exon | 57718687 | 57718746 | 57718687 | ID=Msa1165750-mRNA-1:exon:17535;Parent=Msa1165750-mRNA-1 |
| chr7_4 | exon | 57718011 | 57718070 | 57718011 | ID=Msa1165750-mRNA-1:exon:17534;Parent=Msa1165750-mRNA-1 |
| chr7_4 | exon | 57717850 | 57717959 | 57717850 | ID=Msa1165750-mRNA-1:exon:17533;Parent=Msa1165750-mRNA-1 |
| chr7_4 | exon | 57716032 | 57716266 | 57716032 | ID=Msa1165750-mRNA-1:exon:17532;Parent=Msa1165750-mRNA-1 |
| chr7_4 | exon | 57715809 | 57715936 | 57715809 | ID=Msa1165750-mRNA-1:exon:17531;Parent=Msa1165750-mRNA-1 |
| chr7_4 | exon | 57715194 | 57715446 | 57715194 | ID=Msa1165750-mRNA-1:exon:17530;Parent=Msa1165750-mRNA-1 |
| chr7_4 | CDS | 57720375 | 57720380 | 57720375 | ID=Msa1165750-mRNA-1:cds;Parent=Msa1165750-mRNA-1 |
| chr7_4 | CDS | 57720232 | 57720255 | 57720232 | ID=Msa1165750-mRNA-1:cds;Parent=Msa1165750-mRNA-1 |
| chr7_4 | CDS | 57718687 | 57718746 | 57718687 | ID=Msa1165750-mRNA-1:cds;Parent=Msa1165750-mRNA-1 |
| chr7_4 | CDS | 57718011 | 57718070 | 57718011 | ID=Msa1165750-mRNA-1:cds;Parent=Msa1165750-mRNA-1 |
| chr7_4 | CDS | 57717850 | 57717959 | 57717850 | ID=Msa1165750-mRNA-1:cds;Parent=Msa1165750-mRNA-1 |
| chr7_4 | CDS | 57716032 | 57716266 | 57716032 | ID=Msa1165750-mRNA-1:cds;Parent=Msa1165750-mRNA-1 |
| chr7_4 | CDS | 57715809 | 57715936 | 57715809 | ID=Msa1165750-mRNA-1:cds;Parent=Msa1165750-mRNA-1 |
| chr7_4 | CDS | 57715194 | 57715446 | 57715194 | ID=Msa1165750-mRNA-1:cds;Parent=Msa1165750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
