AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1166260


Find 519 sgRNAs with CRISPR-Local

Find 840 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr7_4 gene 58341957 58352484 58341957 ID=Msa1166260;Name=Msa1166260
chr7_4 mRNA 58341957 58352484 58341957 ID=Msa1166260-mRNA-1;Parent=Msa1166260;Name=Msa1166260-mRNA-1;_AED=0.05;_eAED=0.05;_QI=406|0.92|0.92|1|0.69|0.78|14|1106|1625
chr7_4 exon 58341957 58342316 58341957 ID=Msa1166260-mRNA-1:exon:17875;Parent=Msa1166260-mRNA-1
chr7_4 exon 58342911 58342999 58342911 ID=Msa1166260-mRNA-1:exon:17874;Parent=Msa1166260-mRNA-1
chr7_4 exon 58343118 58343281 58343118 ID=Msa1166260-mRNA-1:exon:17873;Parent=Msa1166260-mRNA-1
chr7_4 exon 58343421 58344108 58343421 ID=Msa1166260-mRNA-1:exon:17872;Parent=Msa1166260-mRNA-1
chr7_4 exon 58344267 58344427 58344267 ID=Msa1166260-mRNA-1:exon:17871;Parent=Msa1166260-mRNA-1
chr7_4 exon 58344929 58345089 58344929 ID=Msa1166260-mRNA-1:exon:17870;Parent=Msa1166260-mRNA-1
chr7_4 exon 58345299 58345459 58345299 ID=Msa1166260-mRNA-1:exon:17869;Parent=Msa1166260-mRNA-1
chr7_4 exon 58345537 58347356 58345537 ID=Msa1166260-mRNA-1:exon:17868;Parent=Msa1166260-mRNA-1
chr7_4 exon 58347470 58347792 58347470 ID=Msa1166260-mRNA-1:exon:17867;Parent=Msa1166260-mRNA-1
chr7_4 exon 58348550 58349820 58348550 ID=Msa1166260-mRNA-1:exon:17866;Parent=Msa1166260-mRNA-1
chr7_4 exon 58349907 58350305 58349907 ID=Msa1166260-mRNA-1:exon:17865;Parent=Msa1166260-mRNA-1
chr7_4 exon 58350460 58350590 58350460 ID=Msa1166260-mRNA-1:exon:17864;Parent=Msa1166260-mRNA-1
chr7_4 exon 58350687 58350759 58350687 ID=Msa1166260-mRNA-1:exon:17863;Parent=Msa1166260-mRNA-1
chr7_4 exon 58351896 58352484 58351896 ID=Msa1166260-mRNA-1:exon:17862;Parent=Msa1166260-mRNA-1
chr7_4 five_prime_UTR 58352079 58352484 58352079 ID=Msa1166260-mRNA-1:five_prime_utr;Parent=Msa1166260-mRNA-1
chr7_4 CDS 58351896 58352078 58351896 ID=Msa1166260-mRNA-1:cds;Parent=Msa1166260-mRNA-1
chr7_4 CDS 58350687 58350759 58350687 ID=Msa1166260-mRNA-1:cds;Parent=Msa1166260-mRNA-1
chr7_4 CDS 58350460 58350590 58350460 ID=Msa1166260-mRNA-1:cds;Parent=Msa1166260-mRNA-1
chr7_4 CDS 58349907 58350305 58349907 ID=Msa1166260-mRNA-1:cds;Parent=Msa1166260-mRNA-1
chr7_4 CDS 58348550 58349820 58348550 ID=Msa1166260-mRNA-1:cds;Parent=Msa1166260-mRNA-1
chr7_4 CDS 58347470 58347792 58347470 ID=Msa1166260-mRNA-1:cds;Parent=Msa1166260-mRNA-1
chr7_4 CDS 58345537 58347356 58345537 ID=Msa1166260-mRNA-1:cds;Parent=Msa1166260-mRNA-1
chr7_4 CDS 58345299 58345459 58345299 ID=Msa1166260-mRNA-1:cds;Parent=Msa1166260-mRNA-1
chr7_4 CDS 58344929 58345089 58344929 ID=Msa1166260-mRNA-1:cds;Parent=Msa1166260-mRNA-1
chr7_4 CDS 58344267 58344427 58344267 ID=Msa1166260-mRNA-1:cds;Parent=Msa1166260-mRNA-1
chr7_4 CDS 58343914 58344108 58343914 ID=Msa1166260-mRNA-1:cds;Parent=Msa1166260-mRNA-1
chr7_4 three_prime_UTR 58343421 58343913 58343421 ID=Msa1166260-mRNA-1:three_prime_utr;Parent=Msa1166260-mRNA-1
chr7_4 three_prime_UTR 58343118 58343281 58343118 ID=Msa1166260-mRNA-1:three_prime_utr;Parent=Msa1166260-mRNA-1
chr7_4 three_prime_UTR 58342911 58342999 58342911 ID=Msa1166260-mRNA-1:three_prime_utr;Parent=Msa1166260-mRNA-1
chr7_4 three_prime_UTR 58341957 58342316 58341957 ID=Msa1166260-mRNA-1:three_prime_utr;Parent=Msa1166260-mRNA-1
Gene Sequence

>Msa1166260

ATGATTTCTGCCGGAGATAGGGATGAAATAAAGGGATTAGGGTTAGGGTTAGGGTTAGGGTTGGGTAGTAGAAGGAGAGAGATGGTGGAGTTTGAGCTTGAAGAAGGTGAAGCTTTTTCATATCAAAACCGTGAACAAGATTTTGACACTACCGTTGATCCTGATATTGCCCTTTCTTACATTGATGACAAACTTCAAGATGTCCTTGGACACTTTCAGAAAGATTTTGAAGGTGGGGTGTCCGCTGAGAATCTGGGGGCAAAATTTGGTGGTTATGGATCATTTTTGCCTACCTATCAGCGCTCTCCTGCTTGGACTCATCCAAGGACTCCACAAAAAAATCATAGTCAAAATTCACCTAGATCTCCTAATAACTTGCACTCGGAGAGTGGACAAGTGGATGCTGTACAATGTTCAACCGGAACTCAACTATCGAGACTTGGCCCAGGTTCTGCTACCTCCTCGAGGCTGGCTGCAATTAAGGGACTCTCTTTAGATGATGGAACAAATAACGAAAATTGCATGGCAATCACTAAGGCCGAGGCATTAAATTCTAAGTATCAGTCTCTGAACACGAAAGCTGCTAGCATATCAGAACAGAAGACACTGAAGGTTCGAATCAAAATTCCTGACGATTTGTCAACACGGAAAAATGCTGCCATATACAGTGGACTTGGTCTAGATGGGTCACCATCATCATCACCGGATGACAGCCCCTCAGAAAGTGAAGGAATTTCTCGCGGCCCTCTAGATGCTCCCTTTGAATCTCCGACCAGTATCCTAAAGATTATTACAACCTTCCCTGAGCCGCTGTCGCCTCTTCATGATGATCTCATTGAATTAACTGAGAAGGAAGTGCGTACCAGAGATAGCATCCCCGGTCCTGTTCATATAGATGACCCCCAAAGTTCCGGCATGTTACTTAATGAATCCAATATTGTCAAAGGTGACAGAAAATTGTTAGGAGGGAAAAAAGTGAAGTCCCTAGAGGATTATGAGTCCTCGATGGAATTTAAGGGTTGCAGTAAGAAGAATACTCGTAATGATGTGGGAAGGCCGTCAAGAAAAGAACAACAAGCTGCAGATGCATTGACTATGGAGGAATTAGTTTCAAACACCATGAAACTTCCACTTTTGTCCAATTTGTATTCTCTCGGTGAAGACTCGGTAAAGGACGTCGATGGGCCATGTAATTCACTGAAGGAAGCCAACAAGGGTGTGGTGAAGGAGAAAACCTTGTCAGACCAAGCACAAAAGGAAGGGGTGGATCAGGCATCTGCCGAAGTGAATGTTTTTTCTGAGAGGGCAAAAGGAGGTTCTGGAAGGAAAGTTGTGGGAGACAAGGTTTTGCTCGATGACACCAAAGTTAGGGCAGCATCAAACACTGAATGTGTAGAGCCTCCTAAGAAGCCTAACCAAAAAAGAGGTAGCCTGGGCGAACAAGACAGTACGACATTGCCTTTTGTGACAGAACATTCATATCATGCGGGGAAGAAGAAATCAAAGGGAATTCATGACACCATGATTATCGAGAGGGAAAAAGAAAACATGAAGGTTGGATCCTCTTCGATCCCCAAAACAAAAAGGAGTACTGATGATAGTTATACATCAAGAAATGAAATTGAAGATGTCAAAGTACAAAAGGGTTCTGGGAAGGCTAGAGATGCTTATAGAGATTTCTTTGGAGAATTGGAAGATGAGGATAAAACCGATTCGCCGGAAACCCCTTATGAAGCTAAACCGAAGGACTCTGAGGCGGTTGAGAGGAGAACGCCAGAAACAAATCTTGGAGCAAAGGAGACATCAGGTGGTAAGAAAATGGATAAGTCGTTAACAGCAGAAGTATATCCTAGAACAGCCACAAATGTCTGGTGCACTGGAAATGCACCTAGCACTGATGCAGAGAACGGAAATGGGGTTCCTGCAATGTTGCCTCCTGTTGAGATGGAAGATAATTGGGTACAGTGTGACAGGTGTCATAAATGGCGTCTTCTTCCTGCTGGCACAAATCCTGATAGCCTACCTGAAAAGTGGCTGTGTAGCATGCTTAATTGGCTCAACCCGCAAAATATCTCGGGAAGTGTTATGGTGGGAGGAACTGGGTCAACTTTCCAGCATCCTGGTCAACGCCATCTAAATAATGATATGCATGCTGTGCCTGGTGGGAAGAAAAAAATTGTGAAAGAAATATCATCAGTGAATGCAGTCATCACTGATGGCATTTCTCATCCTTCATATTCTATAAAGAAAAACATGCAGTCATCAGTGAAAAGTAGGAGCTTAAATGATGTAAACAAATCTCCGGTTGTGAGCGAGGCTGATGCTCCAGGGGAGAGACACAAAAATAAGCCGAGGATGCCAGAGTACAATTCGGATAGAGGTGATGCAAAGAATATGAAAAGCAGGAGGGATCCTGATCAAGATTGTTCGAGGCCATCCAAGAAAGGTAAGACTGACAAGGTTCATTCTGCTGATAAAGACTGGATTCCAGAACAGAATGGAACCGGTAGGAAGATCAGTCATAGCTCAAACAACACTATGCCAACCACTTCAGCTGGCAAAGATCGACCTAGACAGAAAGGCCGCTCCTCATCGAGTGACTCCAAATTTAGAAAGGACAGGCCACCAGTTTCTGCCGAGAAGAGAAACGATAAGGGCCAGGGTTCCTTGGATGAGGGGTCCCTGGATTTGGGAAATTATGGTTCCATTGGTAGTGTGAAAAAGAGGAAATTGAAGGAGTATCAGGATGCTCAAACTCGTAGCACAGGTAATCCTCGGCCACACGAGAGTAGAATTTCTGAGCATGAGTTCAGCGACTCCAGGAAGGAAAAGAAAGCAAGAAATTCAAGATCTGAAGGCAAAGAATCAAGTGCCAGTAAAGGCAGTGGCAGGACTGACAAAAAAGTTAGTCACACAAAGAACCAAAATTTCAGGCAAAATCCTGGGAGCAATCATTCACATAGGAGCATGGATGGAATGGACAGTTCAAAGAGGGACTTGGGGTCTGTGCAGGTTTCTGTTGCAGCCACTTCAAGCTCTTCTAAGGTCTCTGGATCACATAAAACCAAAGCCAGCTTCCAGGAAGTGAAAGGCTCCCCTGTGGAATCAGTTTCTTCCTCGCCTTTAAGAATTTTAAGTACAGATAAGTTTTCAAACAGAGAAATTATGGGGAAAGATGAGCCTCATAATACTGCTGCTGTGGATAGTCCAAGAAGATGCTTAGACGGGGAAGATGATGGTGCAAGTGATCGATCAGAAACGGCCAGGAAGGACAAATCTTTCACCATGGCTCACAGGTCTGATTTTCAGGGCAAGGGTGTTGATCATATGACAGATACTAAGCCTAAAGGTCAAACAAGCAGCCATTATCCCGATAGTGGTGCTGAAACTGTGGCCCTGGAATATCCGGCTGCAGAGCAGATTAAGCATCACGGCGAAGATAGGACCGGTGTTTATTATGCTAACGATAATGTGTCTCATGCAAGGAAAACTGGCACGCAATCAGGTTTGGAGGAAAACAAGCAGGGCTGTAAGTCAGAGCCCCCCAAAGTAAAAGTCAAGAGCTCTAGTTCTCCTAGTCAACTGCCAGATCAGTCTCCGCTAAATGAAGCAAATGATAGGGATGAAAAAGTTAAGTTGGAGAAGTTCGGACTCAATCCTGACCAGAATGAGAATATTGCTAGCAAGAAAGACCTTGCAGTAAAAAATGAAAGCAGGAAAAAAGAGAATCACGTAAAGAGGGAGCATGACATTCAAGAGGTTCGTATTGATGCACCATGCAAACAGGAACCATTACATGCTCCCAGTAAGACTCAGTTGGCAGACCGTGATACCGGAAGATCTTCAAAGAGGTCTCTTTCGGAAAGACCTGATCAAGAAGTGCTTGGAAAAGGGAAGTCTCAAGTTGAGACTTTGATTCATTGCCCACGACCAGCCGCTAGTTCCCAAAAAGGGAATGTAGATATGGAAGTTGATCCGGCCAAAGTTGATGATGCGTCAAAGCTGCAAAAAAAACAATTTAAAAAGGCTGATCATATAAATGGAACTCAGCATATTGGGTCCAGAAATCCTGCACTTAATGGACACAGGTCCAAGGATCCCGATGCACCTAGTCCCGTTAGAAAGGATTCATATAGCCATGCTGCTAACAATGCTGTGAGAGAAGCTAAAGATCTTAAGCACCTGGCAGACCGTCTCAAGAATTCTGGATCCACTCTTGAGAGCACTAATCTATACTTCCAGGCAGCCCTTAAGTTTCTTAATGGAGCCTCTCTGTTAGAATCTGGCAACAACGATAACGCTAAACATAATGAGATGATTCAATCAAAGCAGATGTACAGCAGCACAGCTAAATTGTGCGAGTTTTGTGCCCATGAATATGAGAAATCAAAAGACATGGCTTCAGCTGCCCTGGCCTACAAATGCACGGAGGTGGCATATATGAGGGTAATATATTCTTCGCACACTAGTGCAAACAGAGATCGGCATGAATTGCAGACAGCCCTGCAAATGATTCCTCTTGGTGAATCTCCATCATCATCAGCCTCTGATGTTGACAATGTTAACAACCCTACAGCAGCTGACAAAGTTGCCCTATCCAAGAGTGTCAATTCACCCCAGGTTGCTGGAAACCATGTTATTTCCGCACGGAGTCGTCCGAATTTTGTGAGGATACTCAATTATGCTCAGGATGTGAATTTTGCCATGGAAGCCTCAAGGAAATCACGGAATGCTTTTGCAGCTGCAAAGGCAAGCCTGGGCGTTGGCAAGAATTCAGATGGTATTTCCTCTATCAAGAAGGCCCTTGATTTTAGCTTTCAAGATGTGGAGGGGTTACTACGTTTGGTACGGCTTGCTGTGGAGGCCATTAACCGTTAA

Protein sequence

>Msa1166260

MISAGDRDEIKGLGLGLGLGLGSRRREMVEFELEEGEAFSYQNREQDFDTTVDPDIALSYIDDKLQDVLGHFQKDFEGGVSAENLGAKFGGYGSFLPTYQRSPAWTHPRTPQKNHSQNSPRSPNNLHSESGQVDAVQCSTGTQLSRLGPGSATSSRLAAIKGLSLDDGTNNENCMAITKAEALNSKYQSLNTKAASISEQKTLKVRIKIPDDLSTRKNAAIYSGLGLDGSPSSSPDDSPSESEGISRGPLDAPFESPTSILKIITTFPEPLSPLHDDLIELTEKEVRTRDSIPGPVHIDDPQSSGMLLNESNIVKGDRKLLGGKKVKSLEDYESSMEFKGCSKKNTRNDVGRPSRKEQQAADALTMEELVSNTMKLPLLSNLYSLGEDSVKDVDGPCNSLKEANKGVVKEKTLSDQAQKEGVDQASAEVNVFSERAKGGSGRKVVGDKVLLDDTKVRAASNTECVEPPKKPNQKRGSLGEQDSTTLPFVTEHSYHAGKKKSKGIHDTMIIEREKENMKVGSSSIPKTKRSTDDSYTSRNEIEDVKVQKGSGKARDAYRDFFGELEDEDKTDSPETPYEAKPKDSEAVERRTPETNLGAKETSGGKKMDKSLTAEVYPRTATNVWCTGNAPSTDAENGNGVPAMLPPVEMEDNWVQCDRCHKWRLLPAGTNPDSLPEKWLCSMLNWLNPQNISGSVMVGGTGSTFQHPGQRHLNNDMHAVPGGKKKIVKEISSVNAVITDGISHPSYSIKKNMQSSVKSRSLNDVNKSPVVSEADAPGERHKNKPRMPEYNSDRGDAKNMKSRRDPDQDCSRPSKKGKTDKVHSADKDWIPEQNGTGRKISHSSNNTMPTTSAGKDRPRQKGRSSSSDSKFRKDRPPVSAEKRNDKGQGSLDEGSLDLGNYGSIGSVKKRKLKEYQDAQTRSTGNPRPHESRISEHEFSDSRKEKKARNSRSEGKESSASKGSGRTDKKVSHTKNQNFRQNPGSNHSHRSMDGMDSSKRDLGSVQVSVAATSSSSKVSGSHKTKASFQEVKGSPVESVSSSPLRILSTDKFSNREIMGKDEPHNTAAVDSPRRCLDGEDDGASDRSETARKDKSFTMAHRSDFQGKGVDHMTDTKPKGQTSSHYPDSGAETVALEYPAAEQIKHHGEDRTGVYYANDNVSHARKTGTQSGLEENKQGCKSEPPKVKVKSSSSPSQLPDQSPLNEANDRDEKVKLEKFGLNPDQNENIASKKDLAVKNESRKKENHVKREHDIQEVRIDAPCKQEPLHAPSKTQLADRDTGRSSKRSLSERPDQEVLGKGKSQVETLIHCPRPAASSQKGNVDMEVDPAKVDDASKLQKKQFKKADHINGTQHIGSRNPALNGHRSKDPDAPSPVRKDSYSHAANNAVREAKDLKHLADRLKNSGSTLESTNLYFQAALKFLNGASLLESGNNDNAKHNEMIQSKQMYSSTAKLCEFCAHEYEKSKDMASAALAYKCTEVAYMRVIYSSHTSANRDRHELQTALQMIPLGESPSSSASDVDNVNNPTAADKVALSKSVNSPQVAGNHVISARSRPNFVRILNYAQDVNFAMEASRKSRNAFAAAKASLGVGKNSDGISSIKKALDFSFQDVEGLLRLVRLAVEAINR*