AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1376260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1376260 MtrunA17_Chr1g0212701 99.670 908 3 0 1 908 1 908 0.0 1873
Msa1376260 MtrunA17_Chr1g0212701 33.861 632 386 11 28 634 759 1383 1.08e-88 309
Msa1376260 MtrunA17_Chr7g0222781 85.605 917 122 3 1 908 1 916 0.0 1585
Msa1376260 MtrunA17_Chr7g0222781 33.701 635 383 12 28 634 767 1391 2.11e-90 314
Msa1376260 MtrunA17_Chr7g0264631 42.375 682 362 11 41 701 54 725 2.57e-173 539
Msa1376260 MtrunA17_Chr7g0264631 33.100 571 372 5 79 639 753 1323 4.19e-97 333
Msa1376260 MtrunA17_Chr7g0264631 35.714 154 89 2 755 908 698 841 6.16e-22 102
Msa1376260 MtrunA17_Chr6g0453051 44.482 598 315 4 48 637 13 601 1.67e-170 529
Msa1376260 MtrunA17_Chr6g0453051 34.746 590 375 7 55 636 659 1246 2.64e-95 327
Msa1376260 MtrunA17_Chr6g0453051 33.663 101 64 2 809 908 671 769 2.22e-12 71.6
Msa1376260 MtrunA17_Chr1g0180601 42.291 681 362 10 36 693 19 691 3.07e-170 530
Msa1376260 MtrunA17_Chr1g0180601 32.941 595 388 6 56 640 705 1298 4.54e-90 312
Msa1376260 MtrunA17_Chr1g0180601 34.375 160 93 3 749 908 668 815 3.37e-20 97.1
Msa1376260 MtrunA17_Chr5g0410921 42.504 607 334 7 53 647 1 604 1.27e-157 495
Msa1376260 MtrunA17_Chr5g0410921 38.057 494 303 3 147 637 735 1228 1.82e-97 332
Msa1376260 MtrunA17_Chr1g0193991 38.966 716 403 8 40 742 26 720 5.20e-156 492
Msa1376260 MtrunA17_Chr1g0193991 36.125 609 349 12 58 640 693 1287 3.70e-94 323
Msa1376260 MtrunA17_Chr3g0119381 42.079 606 340 6 46 640 36 641 4.66e-152 482
Msa1376260 MtrunA17_Chr3g0119381 36.145 581 363 6 60 633 713 1292 3.42e-99 338
Msa1376260 MtrunA17_Chr1g0194031 39.871 622 360 5 40 652 22 638 1.85e-151 469
Msa1376260 MtrunA17_Chr4g0069351 37.666 677 408 7 48 710 21 697 3.25e-150 476
Msa1376260 MtrunA17_Chr4g0069351 35.406 579 364 6 63 633 695 1271 1.02e-97 333
Msa1376260 MtrunA17_Chr2g0285191 36.983 749 413 10 47 749 1 736 6.44e-150 476
Msa1376260 MtrunA17_Chr2g0285191 36.964 560 345 5 82 633 730 1289 1.79e-103 350
Msa1376260 MtrunA17_Chr2g0285311 39.074 691 392 10 66 744 30 703 7.63e-150 475
Msa1376260 MtrunA17_Chr2g0285311 36.000 600 363 10 47 633 670 1261 1.73e-104 352
Msa1376260 MtrunA17_Chr2g0285311 33.028 109 71 1 800 908 680 786 2.51e-12 71.2
Msa1376260 MtrunA17_Chr4g0069401 41.158 622 348 6 24 637 1 612 1.16e-147 469
Msa1376260 MtrunA17_Chr4g0069401 35.925 643 366 11 6 633 658 1269 1.74e-105 355
Msa1376260 MtrunA17_Chr2g0285301 40.558 609 347 6 51 644 2 610 7.58e-147 467
Msa1376260 MtrunA17_Chr2g0285301 36.409 596 362 9 49 633 668 1257 1.32e-108 363
Msa1376260 MtrunA17_Chr4g0069361 36.972 687 399 8 48 710 21 697 9.70e-143 456
Msa1376260 MtrunA17_Chr4g0069361 34.429 578 371 5 63 633 695 1271 1.64e-97 333
Msa1376260 MtrunA17_Chr4g0069411 35.758 811 451 14 51 835 31 797 2.19e-142 456
Msa1376260 MtrunA17_Chr4g0069411 33.989 559 362 4 82 633 727 1285 4.19e-86 301
Msa1376260 MtrunA17_Chr6g0481921 39.542 655 367 9 141 782 10 648 1.45e-141 451
Msa1376260 MtrunA17_Chr6g0481921 37.271 601 358 9 47 633 568 1163 6.54e-108 360
Msa1376260 MtrunA17_Chr4g0039821 38.679 636 380 5 39 664 7 642 2.26e-136 439
Msa1376260 MtrunA17_Chr4g0039821 36.565 588 356 9 56 632 687 1268 3.00e-104 352
Msa1376260 MtrunA17_Chr6g0451911 40.448 581 334 6 68 637 21 600 4.52e-135 436
Msa1376260 MtrunA17_Chr6g0451911 34.653 505 292 6 144 626 755 1243 3.45e-80 283
Msa1376260 MtrunA17_Chr6g0451911 31.000 100 68 1 809 908 677 775 8.46e-11 66.2
Msa1376260 MtrunA17_Chr1g0156821 42.468 624 344 8 40 650 5 626 1.08e-134 434
Msa1376260 MtrunA17_Chr1g0156821 34.039 567 366 5 79 637 667 1233 8.88e-99 336
Msa1376260 MtrunA17_Chr1g0156821 35.294 102 65 1 807 908 655 755 6.12e-14 76.6
Msa1376260 MtrunA17_Chr3g0138211 37.482 683 391 7 37 704 27 688 5.15e-132 428
Msa1376260 MtrunA17_Chr3g0138211 32.730 608 381 7 53 633 667 1273 3.48e-84 295
Msa1376260 MtrunA17_Chr6g0452111 40.275 581 335 6 71 640 31 610 1.63e-131 426
Msa1376260 MtrunA17_Chr6g0452111 32.612 601 385 8 50 637 667 1260 3.81e-88 306
Msa1376260 MtrunA17_Chr6g0452111 26.168 214 120 6 710 908 589 779 1.13e-15 82.0
Msa1376260 MtrunA17_Chr8g0344651 37.855 634 376 7 62 686 252 876 1.64e-130 427
Msa1376260 MtrunA17_Chr8g0344651 34.942 518 319 7 127 636 974 1481 9.20e-79 280
Msa1376260 MtrunA17_Chr6g0452041 39.587 581 339 6 68 637 21 600 5.86e-129 419
Msa1376260 MtrunA17_Chr6g0452041 32.667 600 378 9 54 637 672 1261 1.59e-83 293
Msa1376260 MtrunA17_Chr6g0452041 23.404 235 145 5 699 908 556 780 3.39e-16 84.0
Msa1376260 MtrunA17_Chr6g0452141 39.430 596 339 9 68 647 22 611 1.13e-126 413
Msa1376260 MtrunA17_Chr6g0452141 33.795 577 370 8 68 633 680 1255 8.20e-87 303
Msa1376260 MtrunA17_Chr6g0452141 35.644 101 64 1 808 908 679 778 6.11e-15 79.7
Msa1376260 MtrunA17_Chr4g0041871 38.125 640 371 10 71 695 6 635 1.39e-125 410
Msa1376260 MtrunA17_Chr4g0041871 33.217 572 370 7 79 639 678 1248 3.40e-90 312
Msa1376260 MtrunA17_Chr4g0041871 31.928 166 101 5 743 901 599 759 3.99e-16 83.6
Msa1376260 MtrunA17_Chr6g0451881 39.929 566 329 5 68 623 21 585 1.58e-124 407
Msa1376260 MtrunA17_Chr6g0451881 33.457 538 349 6 105 633 708 1245 8.15e-81 285
Msa1376260 MtrunA17_Chr6g0451881 30.392 102 70 1 807 908 667 767 4.54e-12 70.5
Msa1376260 MtrunA17_Chr6g0452171 39.243 581 341 6 68 637 21 600 1.56e-122 402
Msa1376260 MtrunA17_Chr6g0452171 33.107 589 383 6 56 633 670 1258 7.46e-89 308
Msa1376260 MtrunA17_Chr6g0452171 35.965 114 71 2 795 908 670 781 9.79e-17 85.5
Msa1376260 MtrunA17_Chr7g0233901 38.554 581 345 7 71 640 20 599 6.97e-120 394
Msa1376260 MtrunA17_Chr7g0233901 32.484 628 401 8 19 633 617 1234 5.09e-94 323
Msa1376260 MtrunA17_Chr7g0233901 26.887 212 142 6 699 906 552 754 5.79e-19 92.8
Msa1376260 MtrunA17_Chr8g0366451 43.237 414 230 3 122 531 35 447 3.77e-111 349
Msa1376260 MtrunA17_Chr3g0123411 40.000 535 288 7 156 680 1 512 2.45e-106 355
Msa1376260 MtrunA17_Chr3g0123411 31.171 632 415 9 19 638 523 1146 1.34e-87 303
Msa1376260 MtrunA17_Chr3g0123411 27.273 176 110 4 747 908 494 665 1.18e-17 88.6
Msa1376260 MtrunA17_Chr6g0486841 35.703 619 384 7 75 680 25 642 1.25e-104 352
Msa1376260 MtrunA17_Chr6g0486841 31.284 553 371 4 79 622 673 1225 3.84e-80 283
Msa1376260 MtrunA17_Chr8g0366481 36.426 582 364 6 63 639 47 627 1.57e-96 317
Msa1376260 MtrunA17_Chr3g0128391 39.948 383 228 2 150 530 5 387 1.45e-90 298
Msa1376260 MtrunA17_Chr3g0128391 50.000 114 57 0 530 643 446 559 1.23e-25 112
Msa1376260 MtrunA17_Chr6g0452051 38.200 411 249 4 125 531 5 414 2.28e-90 293
Msa1376260 MtrunA17_Chr6g0452061 34.622 569 348 9 79 633 209 767 1.06e-89 302
Msa1376260 MtrunA17_Chr6g0452061 37.349 166 98 2 530 689 13 178 3.27e-23 106
Msa1376260 MtrunA17_Chr6g0452061 34.314 102 66 1 807 908 197 297 3.34e-14 77.0
Msa1376260 MtrunA17_Chr1g0194001 41.823 373 213 2 257 625 2 374 1.28e-88 287
Msa1376260 MtrunA17_Chr4g0061601 33.061 611 387 10 38 632 17 621 4.71e-88 294
Msa1376260 MtrunA17_Chr6g0452071 37.753 445 265 6 200 633 8 451 1.78e-84 279
Msa1376260 MtrunA17_Chr3g0128381 32.024 509 321 8 147 636 134 636 6.02e-75 258
Msa1376260 MtrunA17_Chr6g0452081 52.814 231 102 3 376 603 1 227 1.23e-67 225
Msa1376260 MtrunA17_Chr5g0412741 34.592 503 279 10 164 639 220 699 2.13e-66 236
Msa1376260 MtrunA17_Chr6g0474071 47.699 239 120 3 398 632 211 448 5.21e-62 217
Msa1376260 MtrunA17_Chr7g0227391 28.990 614 365 16 55 632 82 660 8.47e-60 216
Msa1376260 MtrunA17_Chr5g0433051 39.925 268 157 3 367 632 432 697 2.53e-50 189
Msa1376260 MtrunA17_Chr5g0433071 36.842 323 194 5 316 632 381 699 1.10e-45 176
Msa1376260 MtrunA17_Chr1g0178481 30.203 394 246 8 259 626 225 615 4.23e-40 157
Msa1376260 MtrunA17_Chr8g0366471 54.717 106 47 1 530 634 18 123 1.72e-30 117
Msa1376260 MtrunA17_Chr6g0452091 30.806 211 144 2 144 353 32 241 5.11e-29 116
Msa1376260 MtrunA17_Chr2g0295901 24.587 484 340 12 164 634 1020 1491 4.68e-27 119
Msa1376260 MtrunA17_Chr2g0295901 25.641 273 185 4 368 639 613 868 2.48e-17 87.8
Msa1376260 MtrunA17_Chr8g0376961 29.134 254 172 3 397 644 1195 1446 7.54e-27 118
Msa1376260 MtrunA17_Chr8g0376961 27.982 218 140 5 409 624 598 800 2.37e-12 71.2
Msa1376260 MtrunA17_Chr2g0295911 25.311 482 339 13 164 634 1023 1494 1.23e-26 117
Msa1376260 MtrunA17_Chr2g0295911 23.810 273 190 4 368 639 613 868 6.55e-17 86.3
Msa1376260 MtrunA17_Chr2g0295921 29.289 239 166 2 397 634 1270 1506 3.40e-25 113
Msa1376260 MtrunA17_Chr2g0295921 25.311 241 166 3 400 639 653 880 2.73e-17 87.4
Msa1376260 MtrunA17_Chr2g0333911 29.386 228 156 4 397 623 771 994 8.10e-25 111
Msa1376260 MtrunA17_Chr2g0333911 25.000 228 154 4 417 642 177 389 1.03e-13 75.9
Msa1376260 MtrunA17_Chr8g0363771 23.695 498 333 14 161 634 1017 1491 1.73e-24 110
Msa1376260 MtrunA17_Chr8g0363771 25.614 285 194 4 400 679 636 907 4.73e-18 90.1
Msa1376260 MtrunA17_Chr2g0285731 30.303 330 198 7 328 627 1136 1463 2.31e-24 110
Msa1376260 MtrunA17_Chr2g0285731 27.698 278 170 5 400 674 615 864 4.31e-21 100
Msa1376260 MtrunA17_Chr3g0085281 28.509 228 160 2 397 623 1218 1443 2.38e-24 110
Msa1376260 MtrunA17_Chr3g0085281 26.613 248 153 8 431 675 623 844 8.98e-11 66.2
Msa1376260 MtrunA17_Chr8g0341851 28.947 228 159 2 397 623 1217 1442 3.59e-24 109
Msa1376260 MtrunA17_Chr8g0341851 26.891 238 156 3 400 634 606 828 1.48e-14 78.6
Msa1376260 MtrunA17_Chr3g0080941 31.579 228 153 2 397 623 1232 1457 1.61e-23 107
Msa1376260 MtrunA17_Chr3g0080941 24.923 325 219 8 327 645 543 848 9.16e-18 89.0
Msa1376260 MtrunA17_Chr8g0341761 28.571 238 167 2 397 633 1202 1437 4.99e-23 106
Msa1376260 MtrunA17_Chr8g0341761 23.237 241 171 2 400 639 596 823 4.98e-14 77.0
Msa1376260 MtrunA17_Chr3g0080981 31.579 228 153 2 397 623 1231 1456 1.06e-22 105
Msa1376260 MtrunA17_Chr3g0080981 26.549 339 204 13 327 649 543 852 2.44e-18 90.9
Msa1376260 MtrunA17_Chr8g0341751 28.571 238 167 2 397 633 1041 1276 1.57e-22 104
Msa1376260 MtrunA17_Chr8g0341751 22.963 270 181 6 416 671 440 696 5.66e-12 70.1
Msa1376260 MtrunA17_Chr6g0463151 23.901 523 358 15 119 621 761 1263 1.93e-22 104
Msa1376260 MtrunA17_Chr6g0463151 21.569 306 223 4 395 697 433 724 3.09e-14 77.4
Msa1376260 MtrunA17_Chr8g0353781 28.571 238 167 2 397 633 1208 1443 2.23e-22 103
Msa1376260 MtrunA17_Chr8g0353781 24.444 225 156 2 416 639 615 826 6.07e-14 76.6
Msa1376260 MtrunA17_Chr6g0463121 23.420 538 342 16 123 625 947 1449 3.14e-22 103
Msa1376260 MtrunA17_Chr6g0463121 24.000 300 194 5 396 694 616 882 2.23e-13 74.7
Msa1376260 MtrunA17_Chr5g0445741 27.542 236 166 3 389 623 1242 1473 3.59e-22 103
Msa1376260 MtrunA17_Chr5g0445741 27.572 243 160 5 393 633 623 851 3.86e-14 77.4
Msa1376260 MtrunA17_Chr5g0412941 26.432 227 164 2 398 623 83 307 3.92e-22 98.6
Msa1376260 MtrunA17_Chr8g0353541 28.151 238 168 2 397 633 825 1060 4.04e-22 103
Msa1376260 MtrunA17_Chr8g0353541 24.000 225 157 2 416 639 224 435 2.14e-13 74.7
Msa1376260 MtrunA17_Chr6g0463391 23.855 524 356 16 123 625 133 634 4.08e-22 102
Msa1376260 MtrunA17_Chr6g0472531 22.306 529 351 15 123 621 898 1396 4.14e-22 103
Msa1376260 MtrunA17_Chr6g0472531 20.656 305 227 4 395 697 566 857 1.91e-12 71.6
Msa1376260 MtrunA17_Chr5g0412721 26.872 227 163 2 398 623 1244 1468 8.34e-22 102
Msa1376260 MtrunA17_Chr5g0412721 25.180 278 190 5 393 666 612 875 1.18e-14 79.0
Msa1376260 MtrunA17_Chr8g0337121 26.872 227 163 2 398 623 1257 1481 9.62e-22 102
Msa1376260 MtrunA17_Chr8g0337121 27.099 262 170 6 367 623 593 838 9.62e-17 85.9
Msa1376260 MtrunA17_Chr8g0337191 26.872 227 163 2 398 623 1237 1461 9.90e-22 102
Msa1376260 MtrunA17_Chr8g0337191 27.099 262 170 6 367 623 573 818 9.58e-17 85.9
Msa1376260 MtrunA17_Chr7g0262191 27.046 281 194 5 352 623 1228 1506 1.15e-21 101
Msa1376260 MtrunA17_Chr7g0262191 24.540 326 213 9 330 642 568 873 5.52e-12 70.1
Msa1376260 MtrunA17_Chr5g0445701 29.381 194 136 1 413 605 7 200 1.18e-21 95.5
Msa1376260 MtrunA17_Chr5g0445671 27.313 227 162 2 398 623 858 1082 2.00e-21 100
Msa1376260 MtrunA17_Chr5g0445671 27.572 243 160 5 393 633 232 460 4.51e-14 77.0
Msa1376260 MtrunA17_Chr6g0463131 21.989 523 351 13 123 615 948 1443 3.09e-21 100
Msa1376260 MtrunA17_Chr6g0463131 22.876 306 219 6 395 697 616 907 2.88e-15 80.9
Msa1376260 MtrunA17_Chr3g0101471 22.878 542 368 16 122 634 778 1298 3.53e-21 100
Msa1376260 MtrunA17_Chr3g0101471 28.947 228 144 6 431 654 461 674 2.22e-15 81.3
Msa1376260 MtrunA17_Chr1g0195691 28.870 239 167 2 397 634 1270 1506 3.60e-21 100
Msa1376260 MtrunA17_Chr1g0195691 23.507 268 182 4 418 675 668 922 1.00e-15 82.4
Msa1376260 MtrunA17_Chr1g0183191 27.948 229 162 2 396 623 1280 1506 4.01e-21 100
Msa1376260 MtrunA17_Chr1g0183191 25.725 276 177 5 400 671 643 894 1.90e-13 75.1
Msa1376260 MtrunA17_Chr8g0341811 27.311 238 170 2 397 633 1029 1264 4.47e-21 99.8
Msa1376260 MtrunA17_Chr8g0341811 25.339 221 151 3 418 637 455 662 4.52e-14 77.0
Msa1376260 MtrunA17_Chr6g0463181 26.872 227 160 3 396 621 1208 1429 4.70e-21 99.8
Msa1376260 MtrunA17_Chr6g0463181 21.711 304 222 5 395 697 602 890 7.50e-15 79.7
Msa1376260 MtrunA17_Chr6g0463141 27.706 231 161 3 396 625 1249 1474 5.05e-21 99.8
Msa1376260 MtrunA17_Chr6g0471281 23.986 567 369 17 123 666 948 1475 6.15e-21 99.4
Msa1376260 MtrunA17_Chr6g0471281 21.799 289 204 4 394 681 615 882 5.87e-13 73.6
Msa1376260 MtrunA17_Chr1g0202221 25.820 244 171 4 396 634 1131 1369 6.30e-21 99.4
Msa1376260 MtrunA17_Chr1g0202221 23.137 255 177 7 395 645 613 852 4.89e-11 67.0
Msa1376260 MtrunA17_Chr3g0101441 26.337 243 171 3 398 634 1060 1300 1.06e-20 98.6
Msa1376260 MtrunA17_Chr3g0101441 27.519 258 171 5 400 654 432 676 3.32e-14 77.4
Msa1376260 MtrunA17_Chr3g0101461 25.753 299 202 5 352 634 1006 1300 1.15e-20 98.6
Msa1376260 MtrunA17_Chr3g0101461 28.352 261 171 5 400 657 432 679 1.67e-15 81.6
Msa1376260 MtrunA17_Chr6g0463201 22.938 497 346 13 146 625 978 1454 1.16e-20 98.6
Msa1376260 MtrunA17_Chr6g0463201 22.531 324 222 6 367 675 590 899 5.16e-12 70.5
Msa1376260 MtrunA17_Chr2g0285231 50.602 83 41 0 545 627 22 104 1.86e-20 87.4
Msa1376260 MtrunA17_Chr8g0341801 27.311 238 170 2 397 633 184 419 3.01e-20 94.7
Msa1376260 MtrunA17_Chr8g0359291 25.991 227 162 3 396 621 406 627 3.11e-20 96.3
Msa1376260 MtrunA17_Chr3g0101481 25.551 227 166 2 398 623 1253 1477 1.32e-19 95.1
Msa1376260 MtrunA17_Chr3g0101481 28.390 236 153 5 400 633 624 845 2.62e-14 77.8
Msa1376260 MtrunA17_Chr8g0393151 27.755 245 165 6 383 622 2 239 6.80e-19 87.4
Msa1376260 MtrunA17_Chr6g0484351 28.629 248 174 2 387 633 399 644 7.90e-19 91.7
Msa1376260 MtrunA17_Chr6g0463211 25.926 243 167 6 398 634 1298 1533 2.82e-17 87.4
Msa1376260 MtrunA17_Chr6g0463211 22.615 283 191 8 396 666 654 920 1.86e-11 68.6
Msa1376260 MtrunA17_Chr2g0300791 33.333 99 63 2 809 906 14 110 4.54e-13 68.2
Msa1376260 MtrunA17_Chr5g0412921 25.325 308 197 7 378 666 573 866 7.80e-13 72.8
Msa1376260 MtrunA17_Chr7g0249091 28.862 246 142 10 400 620 86 323 1.46e-11 67.0
Msa1376260 MtrunA17_Chr8g0341791 24.540 163 122 1 478 639 16 178 1.77e-11 67.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1376260 AT3G55320.1 81.453 922 155 4 1 908 1 920 0.0 1539
Msa1376260 AT3G55320.1 35.614 570 347 6 79 634 832 1395 2.51e-90 314
Msa1376260 AT2G39480.1 82.283 920 150 4 1 908 1 919 0.0 1529
Msa1376260 AT2G39480.1 34.483 609 369 9 40 634 802 1394 4.52e-89 311
Msa1376260 AT2G39480.2 84.324 740 115 1 169 908 1 739 0.0 1283
Msa1376260 AT2G39480.2 34.483 609 369 9 40 634 622 1214 1.48e-89 310
Msa1376260 AT2G36910.1 43.472 651 340 8 59 693 16 654 1.90e-167 523
Msa1376260 AT2G36910.1 32.574 571 375 6 79 639 696 1266 2.89e-88 307
Msa1376260 AT2G36910.1 34.416 154 89 4 764 908 634 784 1.49e-20 98.6
Msa1376260 AT3G28860.1 43.980 598 318 5 48 637 15 603 8.79e-165 514
Msa1376260 AT3G28860.1 34.526 559 357 6 85 636 692 1248 6.30e-92 317
Msa1376260 AT3G28860.1 33.333 114 74 2 796 908 659 771 4.05e-13 74.3
Msa1376260 AT1G10680.2 41.692 650 351 8 60 691 18 657 1.33e-162 507
Msa1376260 AT1G10680.2 33.714 525 333 8 64 579 644 1162 3.25e-82 289
Msa1376260 AT1G10680.2 28.395 162 104 3 757 908 586 745 9.54e-13 73.2
Msa1376260 AT1G10680.1 41.692 650 351 8 60 691 18 657 1.78e-162 508
Msa1376260 AT1G10680.1 34.418 584 367 9 64 637 644 1221 6.48e-100 339
Msa1376260 AT1G10680.1 28.395 162 104 3 757 908 586 745 7.68e-13 73.6
Msa1376260 AT4G25960.1 40.971 659 364 9 54 691 51 705 1.03e-161 507
Msa1376260 AT4G25960.1 33.278 604 372 8 55 637 676 1269 9.77e-97 331
Msa1376260 AT4G25960.1 30.409 171 97 5 757 908 626 793 3.16e-13 74.7
Msa1376260 AT1G27940.1 43.396 583 318 5 65 637 29 609 4.71e-155 489
Msa1376260 AT1G27940.1 35.702 577 343 9 79 637 677 1243 2.10e-100 341
Msa1376260 AT1G27940.1 40.404 99 58 1 810 908 668 765 8.88e-15 79.7
Msa1376260 AT1G28010.1 41.408 611 328 6 56 637 1 610 3.67e-150 476
Msa1376260 AT1G28010.1 34.912 570 359 8 79 638 679 1246 1.10e-95 328
Msa1376260 AT1G28010.1 40.404 99 58 1 810 908 670 767 1.82e-14 78.6
Msa1376260 AT5G46540.1 39.703 607 359 4 66 665 18 624 1.02e-147 469
Msa1376260 AT5G46540.1 35.602 573 359 6 70 633 670 1241 2.74e-94 324
Msa1376260 AT3G62150.3 42.539 583 327 5 66 640 63 645 9.67e-147 468
Msa1376260 AT3G62150.3 36.879 564 342 7 82 634 729 1289 8.72e-103 348
Msa1376260 AT3G62150.2 42.539 583 327 5 66 640 63 645 9.67e-147 468
Msa1376260 AT3G62150.2 36.879 564 342 7 82 634 729 1289 8.72e-103 348
Msa1376260 AT3G62150.1 42.539 583 327 5 66 640 63 645 9.67e-147 468
Msa1376260 AT3G62150.1 36.879 564 342 7 82 634 729 1289 8.72e-103 348
Msa1376260 AT2G47000.3 41.480 581 334 4 66 640 46 626 3.40e-146 459
Msa1376260 AT2G47000.3 26.102 295 202 5 51 335 687 975 1.56e-23 107
Msa1376260 AT2G47000.7 41.480 581 334 4 66 640 46 626 3.40e-146 459
Msa1376260 AT2G47000.7 26.102 295 202 5 51 335 687 975 1.56e-23 107
Msa1376260 AT4G01830.1 40.604 596 346 4 58 645 5 600 6.84e-146 464
Msa1376260 AT4G01830.1 36.082 582 354 8 66 634 647 1223 1.90e-103 349
Msa1376260 AT4G18050.1 42.268 582 329 4 66 640 16 597 1.87e-145 463
Msa1376260 AT4G18050.1 37.394 591 346 8 52 633 654 1229 2.58e-99 338
Msa1376260 AT2G47000.4 41.480 581 334 4 66 640 46 626 3.08e-145 459
Msa1376260 AT2G47000.4 25.765 392 271 7 51 429 687 1071 3.49e-33 139
Msa1376260 AT4G18050.2 42.268 582 329 4 66 640 26 607 4.19e-145 462
Msa1376260 AT4G18050.2 37.331 592 347 8 51 633 663 1239 4.96e-99 337
Msa1376260 AT2G47000.2 41.480 581 334 4 66 640 46 626 8.51e-145 460
Msa1376260 AT2G47000.2 31.633 490 313 8 51 525 687 1169 1.49e-68 249
Msa1376260 AT2G47000.6 41.480 581 334 4 66 640 46 626 8.39e-144 460
Msa1376260 AT2G47000.6 35.333 600 365 9 51 634 687 1279 9.91e-108 362
Msa1376260 AT2G47000.5 41.480 581 334 4 66 640 46 626 8.39e-144 460
Msa1376260 AT2G47000.5 35.333 600 365 9 51 634 687 1279 9.91e-108 362
Msa1376260 AT2G47000.1 41.480 581 334 4 66 640 46 626 8.39e-144 460
Msa1376260 AT2G47000.1 35.333 600 365 9 51 634 687 1279 9.91e-108 362
Msa1376260 AT4G01820.2 41.736 599 341 5 59 649 1 599 1.39e-142 448
Msa1376260 AT4G01820.2 25.670 261 187 3 82 337 661 919 1.32e-18 92.0
Msa1376260 AT1G02530.2 40.164 610 353 5 66 663 28 637 4.06e-141 445
Msa1376260 AT1G02530.2 25.000 308 213 8 35 335 664 960 6.83e-18 89.7
Msa1376260 AT4G01820.1 41.736 599 341 5 59 649 1 599 4.30e-140 449
Msa1376260 AT4G01820.1 34.655 580 365 7 66 634 646 1222 5.47e-96 328
Msa1376260 AT1G02530.1 40.164 610 353 5 66 663 28 637 1.40e-138 446
Msa1376260 AT1G02530.1 35.016 614 374 11 35 634 664 1266 4.33e-105 354
Msa1376260 AT1G02520.1 41.681 583 332 4 66 640 41 623 5.78e-138 444
Msa1376260 AT1G02520.1 35.505 614 371 9 35 634 669 1271 2.03e-109 367
Msa1376260 AT1G02520.2 41.681 583 332 4 66 640 41 623 5.78e-138 444
Msa1376260 AT1G02520.2 35.505 614 371 9 35 634 669 1271 2.03e-109 367
Msa1376260 AT1G02520.3 41.681 583 332 4 66 640 41 623 5.78e-138 444
Msa1376260 AT1G02520.3 35.505 614 371 9 35 634 669 1271 2.03e-109 367
Msa1376260 AT3G28380.1 38.079 604 355 9 47 637 1 598 2.75e-127 414
Msa1376260 AT3G28380.1 33.618 586 373 7 60 632 650 1232 1.77e-87 305
Msa1376260 AT3G28380.1 24.299 214 147 5 699 908 554 756 2.62e-11 68.6
Msa1376260 AT3G28390.1 36.883 648 376 13 71 691 11 652 5.01e-127 414
Msa1376260 AT3G28390.1 33.390 584 368 9 66 633 640 1218 1.99e-85 298
Msa1376260 AT3G28390.1 25.592 211 145 6 699 908 542 741 1.52e-12 72.4
Msa1376260 AT3G28345.1 36.567 670 397 10 47 691 1 667 5.58e-127 414
Msa1376260 AT3G28345.1 31.654 635 416 8 18 639 610 1239 1.36e-85 299
Msa1376260 AT3G28345.1 26.168 214 143 6 699 908 554 756 3.41e-13 74.7
Msa1376260 AT3G28415.2 37.306 579 346 8 71 636 10 584 2.37e-124 406
Msa1376260 AT3G28415.2 33.390 590 377 7 61 637 640 1226 1.51e-88 307
Msa1376260 AT3G28360.1 37.866 581 341 8 71 637 10 584 1.12e-120 396
Msa1376260 AT3G28360.1 31.419 592 394 6 60 640 636 1226 4.82e-83 291
Msa1376260 AT3G28415.1 36.788 579 341 10 71 636 10 576 1.31e-118 390
Msa1376260 AT3G28415.1 33.390 590 377 7 61 637 632 1218 1.51e-88 307
Msa1376260 AT1G27940.2 47.103 397 203 4 246 637 1 395 2.74e-107 356
Msa1376260 AT1G27940.2 35.702 577 343 9 79 637 463 1029 1.98e-102 343
Msa1376260 AT1G27940.2 40.404 99 58 1 810 908 454 551 5.05e-15 80.5
Msa1376260 AT4G01830.2 36.082 582 354 8 66 634 413 989 1.55e-105 350
Msa1376260 AT4G01830.2 43.681 364 201 3 286 645 3 366 5.25e-89 305
Msa1376260 AT5G39040.1 33.278 604 376 11 49 634 38 632 1.54e-88 296
Msa1376260 AT1G70610.2 33.673 490 307 8 156 634 30 512 5.77e-67 233
Msa1376260 AT1G70610.1 31.333 600 364 14 60 634 117 693 6.77e-67 238
Msa1376260 AT5G58270.1 33.803 426 243 11 226 632 305 710 1.28e-53 200
Msa1376260 AT4G25450.3 44.583 240 128 3 398 633 299 537 4.02e-52 192
Msa1376260 AT4G25450.1 44.583 240 128 3 398 633 468 706 3.47e-51 192
Msa1376260 AT4G28620.1 31.871 433 264 9 213 632 256 670 3.72e-50 189
Msa1376260 AT4G28630.1 40.288 278 159 4 367 639 400 675 4.56e-49 186
Msa1376260 AT5G39040.2 28.274 481 318 10 49 511 38 509 2.57e-43 166
Msa1376260 AT5G03910.1 38.489 278 158 5 362 628 357 632 5.00e-40 158
Msa1376260 AT2G07680.6 32.468 231 148 3 396 623 1087 1312 1.13e-25 115
Msa1376260 AT2G07680.6 28.218 202 130 3 423 622 507 695 6.75e-12 70.5
Msa1376260 AT2G07680.4 32.468 231 148 3 396 623 1161 1386 1.20e-25 115
Msa1376260 AT2G07680.4 28.218 202 130 3 423 622 581 769 6.79e-12 70.5
Msa1376260 AT2G07680.1 32.468 231 148 3 396 623 1164 1389 1.26e-25 115
Msa1376260 AT2G07680.1 28.218 202 130 3 423 622 584 772 7.21e-12 70.5
Msa1376260 AT2G07680.3 32.468 231 148 3 396 623 1186 1411 1.35e-25 115
Msa1376260 AT2G07680.3 28.218 202 130 3 423 622 606 794 7.06e-12 70.5
Msa1376260 AT2G07680.5 32.468 231 148 3 396 623 1170 1395 1.57e-25 114
Msa1376260 AT2G07680.5 28.218 202 130 3 423 622 590 778 8.06e-12 70.1
Msa1376260 AT4G25450.2 42.667 150 81 3 398 543 468 616 9.26e-25 110
Msa1376260 AT1G04120.1 29.075 227 158 2 398 623 1266 1490 7.45e-23 106
Msa1376260 AT1G04120.1 26.613 248 164 3 400 642 622 856 4.55e-14 77.4
Msa1376260 AT1G04120.3 29.075 227 158 2 398 623 1231 1455 8.45e-23 105
Msa1376260 AT1G04120.3 26.613 248 164 3 400 642 587 821 4.96e-14 77.4
Msa1376260 AT1G30420.1 29.091 330 196 7 328 624 1134 1458 1.09e-22 105
Msa1376260 AT1G30420.1 29.388 245 154 8 400 641 615 843 7.61e-17 86.7
Msa1376260 AT1G30400.2 28.374 289 181 5 397 673 611 885 2.30e-22 104
Msa1376260 AT1G30400.2 28.529 333 200 7 327 626 1135 1462 1.69e-21 101
Msa1376260 AT1G30400.1 28.374 289 181 5 397 673 611 885 2.30e-22 104
Msa1376260 AT1G30400.1 28.529 333 200 7 327 626 1135 1462 1.69e-21 101
Msa1376260 AT3G60160.1 28.033 239 166 3 389 623 1241 1477 2.69e-22 104
Msa1376260 AT3G60160.1 27.027 259 174 3 367 623 596 841 1.89e-12 72.4
Msa1376260 AT3G60160.3 28.033 239 166 3 389 623 1205 1441 3.13e-22 103
Msa1376260 AT3G60160.3 27.027 259 174 3 367 623 560 805 2.30e-12 72.0
Msa1376260 AT3G13090.1 28.509 228 160 2 397 623 1216 1441 3.47e-22 103
Msa1376260 AT2G34660.1 31.276 243 152 4 400 641 614 842 7.64e-22 102
Msa1376260 AT2G34660.1 28.743 334 198 9 328 627 1141 1468 3.45e-21 100
Msa1376260 AT2G34660.2 31.276 243 152 4 400 641 614 842 7.64e-22 102
Msa1376260 AT2G34660.2 28.743 334 198 9 328 627 1141 1468 3.45e-21 100
Msa1376260 AT2G34660.3 31.276 243 152 4 400 641 327 555 9.90e-22 102
Msa1376260 AT2G34660.3 28.743 334 198 9 328 627 854 1181 4.52e-21 100
Msa1376260 AT3G21250.1 28.151 238 168 2 397 633 1201 1436 1.04e-21 102
Msa1376260 AT3G21250.1 26.027 292 164 10 367 642 564 819 5.47e-14 77.4
Msa1376260 AT3G21250.5 28.151 238 168 2 397 633 1207 1442 1.07e-21 102
Msa1376260 AT3G21250.5 26.027 292 164 10 367 642 570 825 5.81e-14 77.0
Msa1376260 AT3G21250.4 28.151 238 168 2 397 633 1218 1453 1.17e-21 102
Msa1376260 AT3G21250.4 26.712 292 173 9 367 642 570 836 1.52e-17 89.0
Msa1376260 AT3G21250.2 28.151 238 168 2 397 633 1212 1447 1.19e-21 102
Msa1376260 AT3G21250.2 26.712 292 173 9 367 642 564 830 1.78e-17 88.6
Msa1376260 AT3G21250.6 28.151 238 168 2 397 633 796 1031 1.34e-21 101
Msa1376260 AT3G21250.6 26.712 292 173 9 367 642 148 414 2.22e-17 88.2
Msa1376260 AT3G21250.3 28.151 238 168 2 397 633 796 1031 1.34e-21 101
Msa1376260 AT3G21250.3 26.712 292 173 9 367 642 148 414 2.22e-17 88.2
Msa1376260 AT3G13100.2 28.509 228 160 2 397 623 993 1218 2.08e-21 101
Msa1376260 AT3G13100.1 28.509 228 160 2 397 623 1238 1463 2.72e-21 100
Msa1376260 AT3G13080.1 28.070 228 161 2 397 623 1266 1491 3.06e-21 100
Msa1376260 AT3G60970.1 27.753 227 161 2 398 623 800 1024 3.45e-21 100
Msa1376260 AT3G60970.1 25.490 306 209 4 367 670 180 468 3.51e-17 87.4
Msa1376260 AT1G67940.1 30.332 211 135 6 417 622 44 247 4.24e-21 94.7
Msa1376260 AT1G30410.1 28.399 331 199 7 327 624 1136 1461 4.67e-21 100
Msa1376260 AT1G30410.1 29.918 244 154 7 400 641 618 846 6.01e-17 87.0
Msa1376260 AT1G30410.2 28.485 330 198 7 328 624 1134 1458 4.82e-21 100
Msa1376260 AT1G30410.2 29.918 244 154 7 400 641 615 843 6.42e-17 86.7
Msa1376260 AT1G30410.6 28.485 330 198 7 328 624 1134 1458 4.82e-21 100
Msa1376260 AT1G30410.6 29.918 244 154 7 400 641 615 843 6.42e-17 86.7
Msa1376260 AT1G30410.4 28.485 330 198 7 328 624 1134 1458 4.82e-21 100
Msa1376260 AT1G30410.4 29.918 244 154 7 400 641 615 843 6.42e-17 86.7
Msa1376260 AT1G30410.5 28.485 330 198 7 328 624 1019 1343 7.33e-21 99.8
Msa1376260 AT1G30410.5 29.918 244 154 7 400 641 500 728 8.14e-17 86.3
Msa1376260 AT1G04120.2 28.634 227 154 3 398 623 1266 1485 8.21e-21 99.4
Msa1376260 AT1G04120.2 26.613 248 164 3 400 642 622 856 4.07e-14 77.8
Msa1376260 AT3G13080.5 27.778 216 153 2 397 611 1266 1479 1.38e-20 98.6
Msa1376260 AT3G62700.1 25.070 359 235 7 351 704 599 928 3.86e-20 97.4
Msa1376260 AT3G62700.1 28.033 239 169 2 397 634 1294 1530 9.20e-20 95.9
Msa1376260 AT2G47800.1 22.612 513 344 13 149 634 1021 1507 3.92e-19 94.0
Msa1376260 AT2G47800.1 25.806 279 177 5 368 639 613 868 2.38e-18 91.3
Msa1376260 AT3G59140.1 25.000 244 173 4 396 634 1203 1441 1.34e-18 92.4
Msa1376260 AT3G59140.1 23.762 303 214 5 397 697 598 885 1.62e-13 75.9
Msa1376260 AT1G30410.3 29.918 244 154 7 400 641 615 843 6.17e-17 86.7
Msa1376260 AT1G30420.2 29.388 245 154 8 400 641 615 843 6.36e-17 86.7
Msa1376260 AT3G13080.2 25.877 228 141 3 397 623 1266 1466 4.23e-14 77.4
Msa1376260 AT3G60160.2 27.027 259 174 3 367 623 596 841 1.44e-12 72.4
Msa1376260 AT2G07680.2 28.218 202 130 3 423 622 606 794 6.15e-12 70.5
Msa1376260 AT1G65410.1 30.000 250 134 13 400 620 85 322 3.28e-11 66.2

Find 251 sgRNAs with CRISPR-Local

Find 481 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGAAGAATCTTTCTCAATT+TGG 0.089864 tig0019789:+48500 None:intergenic
CCCCTTCTTGCTTATGTTAT+CGG 0.167179 tig0019789:-47956 Msa1376260:CDS
GCATTTCTACTTTGGTATAA+TGG 0.201298 tig0019789:-47813 Msa1376260:CDS
ATGAGTTTCTTTGATACTTA+TGG 0.202724 tig0019789:-51560 Msa1376260:CDS
CCTGGGTGACCAGTCCTATT+TGG 0.203140 tig0019789:+49426 None:intergenic
GAATTCAAATTTAATATATC+AGG 0.205586 tig0019789:+47711 None:intergenic
CCTCCTGCAGCAACAATAAA+TGG 0.242237 tig0019789:+51273 None:intergenic
CATTTCTACTTTGGTATAAT+GGG 0.244149 tig0019789:-47812 Msa1376260:CDS
TGGGAATTATATTCATAATA+TGG 0.259981 tig0019789:-51370 Msa1376260:CDS
ATCGAGGTCAACCCTCATTT+TGG 0.267994 tig0019789:-48060 Msa1376260:CDS
CCACTTAAGATAGGGATTTC+AGG 0.268612 tig0019789:+49773 None:intergenic
CTTGGCCTTGGATTTACATA+TGG 0.280716 tig0019789:-50167 Msa1376260:CDS
AGAGGTGAAACAGGGGATTC+TGG 0.285167 tig0019789:+48193 None:intergenic
CTTGTCCAAGGGCTTGGCCT+TGG 0.293618 tig0019789:-50179 Msa1376260:CDS
GTCTTTCAGATTGGCAGGGC+TGG 0.297154 tig0019789:-49169 Msa1376260:intron
CTTCTGTCTTTCAGATTGGC+AGG 0.298237 tig0019789:-49174 Msa1376260:intron
TATCAAATATATTCCTTCAT+AGG 0.300514 tig0019789:-51248 Msa1376260:CDS
GATGGAAAATGGTCAGTCTT+TGG 0.304391 tig0019789:-48332 Msa1376260:CDS
AACTGAGCAAAGCAGGTTCC+TGG 0.311177 tig0019789:+49408 None:intergenic
AACACCTGTTTCCGAGGTTT+CGG 0.314250 tig0019789:-53509 Msa1376260:CDS
CTCCTGCTTGACGAGGTTAC+TGG 0.327609 tig0019789:-49076 Msa1376260:CDS
TTTATCAGTTCATTAGATAA+AGG 0.329293 tig0019789:-49299 Msa1376260:CDS
GAAGGTGACTTCATCATTCT+AGG 0.331022 tig0019789:+48448 None:intergenic
TTTATCTAATGAACTGATAA+AGG 0.332299 tig0019789:+49301 None:intergenic
CTTGTTGGCAGAAACGGTTC+TGG 0.334028 tig0019789:-49713 Msa1376260:CDS
GATGTTAAAAGAGGTGAAAC+AGG 0.336770 tig0019789:+48184 None:intergenic
ACTCTGGGTTGGAAGGTTCT+TGG 0.346583 tig0019789:-50117 Msa1376260:CDS
ATGGTTTCCAGAGGTCTATT+CGG 0.348319 tig0019789:-53559 Msa1376260:CDS
AGCATAGGTGCTGCAATCTT+TGG 0.350563 tig0019789:-47989 Msa1376260:CDS
TCCATCATCTTCTCAGGTGG+TGG 0.351488 tig0019789:+48349 None:intergenic
CTCCATAACTGCTATATAAT+CGG 0.354018 tig0019789:+48946 None:intergenic
CATCATTCTCCGGACTCTTT+CGG 0.354959 tig0019789:+47778 None:intergenic
AGAAAGAGCCGTCAATAAAA+AGG 0.357842 tig0019789:-48300 Msa1376260:CDS
CCGGTTTGACTGGTTTCTTA+TGG 0.360679 tig0019789:-53335 Msa1376260:CDS
AAATGGAAGAAAGGGTGTTT+TGG 0.363523 tig0019789:+53908 None:intergenic
GGCTCTGGATCTCCTTATGC+TGG 0.365134 tig0019789:-49017 Msa1376260:CDS
AAAGAGTTTCTGCTGTATTT+CGG 0.365922 tig0019789:-48420 Msa1376260:CDS
GAGTGGCTTTATGCTGTGTT+AGG 0.366699 tig0019789:-48013 Msa1376260:CDS
CATGCAGTATTAGACCTCTT+TGG 0.367010 tig0019789:+48827 None:intergenic
TTGGCCTTGGATTTACATAT+GGG 0.370237 tig0019789:-50166 Msa1376260:CDS
AGCAGCCAGCATTGCTGAAC+AGG 0.370715 tig0019789:-51193 Msa1376260:intron
AATTCATCAGAATAACTATC+TGG 0.371463 tig0019789:+48118 None:intergenic
GAATGGCTGAGGAGCCAAAT+AGG 0.371511 tig0019789:-49440 Msa1376260:CDS
GGAAGGTCAACTTGTTGAAA+TGG 0.373570 tig0019789:-48924 Msa1376260:CDS
AGATAAAACCCACTTAAGAT+AGG 0.375966 tig0019789:+49764 None:intergenic
TGAGGCTGAAAGGTCTGTTC+AGG 0.383030 tig0019789:-49041 Msa1376260:CDS
CACTGACTGAACATCAATCT+TGG 0.384044 tig0019789:+48243 None:intergenic
GTTTCATGTTGGATTCTTAC+CGG 0.391119 tig0019789:-51641 Msa1376260:CDS
TTCAGCAATGCTGGCTGCTT+CGG 0.397294 tig0019789:+51197 None:intergenic
AGACCTCTTTGGAAGTTTAG+TGG 0.398490 tig0019789:+48838 None:intergenic
ATAAGTCTTGTCCAAGGGCT+TGG 0.402863 tig0019789:-50185 Msa1376260:CDS
TCTATCGCTGCGGCGGCTCA+TGG 0.406934 tig0019789:-53304 Msa1376260:CDS
GGAGTCTCCGTCACCGTTCA+TGG 0.407863 tig0019789:-53479 Msa1376260:CDS
GTTCTTGTGCATTACAACTC+TGG 0.409584 tig0019789:-50133 Msa1376260:CDS
GGCTCCGAAACCTCGGAAAC+AGG 0.409897 tig0019789:+53505 None:intergenic
CCATCATCTTCTCAGGTGGT+GGG 0.410014 tig0019789:+48350 None:intergenic
AACGCCACCGTGGCGGCGCG+TGG 0.412548 tig0019789:+53693 None:intergenic
AAACATCAAGAATTTGAAAC+TGG 0.415298 tig0019789:-49462 Msa1376260:CDS
CGGTTCTATGATCCAACATT+AGG 0.419536 tig0019789:-49662 Msa1376260:intron
TTTGATACTTATGGAAATAA+CGG 0.425862 tig0019789:-51551 Msa1376260:CDS
CGCAGGCAGTTTCCTATATA+CGG 0.427478 tig0019789:-50292 Msa1376260:intron
TGCAGACAAGGTCCGTATAT+AGG 0.427618 tig0019789:+50280 None:intergenic
ATAAGAGACAACATTGCATA+TGG 0.432177 tig0019789:-49380 Msa1376260:CDS
CGTGTGCTGACCGGTTTGAC+TGG 0.433144 tig0019789:-53345 Msa1376260:CDS
TTCTTGTGCATTACAACTCT+GGG 0.433681 tig0019789:-50132 Msa1376260:CDS
CTGTTTGCTGTCATTCTAAG+TGG 0.434187 tig0019789:-50053 Msa1376260:CDS
TATCAAAGAAACTCATATCT+TGG 0.435608 tig0019789:+51567 None:intergenic
GGTTATTTGCGTGTGCTGAC+CGG 0.436044 tig0019789:-53354 Msa1376260:CDS
TGCAAGGAAATATAGAGTTT+CGG 0.436135 tig0019789:-49823 Msa1376260:CDS
AATTTCTACTCATTTGATCA+AGG 0.438840 tig0019789:-49929 Msa1376260:CDS
TATCATCTCGAATAGTCTAT+AGG 0.440020 tig0019789:+49895 None:intergenic
TGCCGATTATATAGCAGTTA+TGG 0.440582 tig0019789:-48948 Msa1376260:CDS
GACTGGTTTCTTATGGTGGT+TGG 0.443295 tig0019789:-53328 Msa1376260:CDS
TGGTTTCCAGAGGTCTATTC+GGG 0.443931 tig0019789:-53558 Msa1376260:CDS
AATAACCTGTTCAGCAATGC+TGG 0.446255 tig0019789:+51188 None:intergenic
ACCTCGGAAACAGGTGTTAA+CGG 0.446830 tig0019789:+53514 None:intergenic
AAGGTCTGTTCAGGAGGCTC+TGG 0.447408 tig0019789:-49032 Msa1376260:CDS
CACTTAAGATAGGGATTTCA+GGG 0.447489 tig0019789:+49774 None:intergenic
CAGCTGCTGTTCCTTTCTCT+CGG 0.447662 tig0019789:-53375 Msa1376260:CDS
GTGGCACTTGTTGGCAGAAA+CGG 0.450321 tig0019789:-49719 Msa1376260:CDS
GAGGTGAAACAGGGGATTCT+GGG 0.450462 tig0019789:+48194 None:intergenic
AGGAGCAGGATATGTTTCAT+AGG 0.451162 tig0019789:-53228 Msa1376260:CDS
AACATCAATCTTGGGTAACT+CGG 0.452914 tig0019789:+48252 None:intergenic
TTCATCATTCTAGGGGATGA+TGG 0.454080 tig0019789:+48457 None:intergenic
CCTGAGAAGATGATGGAAAA+TGG 0.454583 tig0019789:-48343 Msa1376260:CDS
GTCTGCTAAATGTTTGTGAA+TGG 0.455134 tig0019789:+48140 None:intergenic
TCGTCAAGCAGGAGAATTGA+TGG 0.456288 tig0019789:+49085 None:intergenic
GACGGCTGTCTGCCGTTCTC+CGG 0.457090 tig0019789:+51622 None:intergenic
TTGACCATTGTTTATATCGC+TGG 0.457280 tig0019789:-51776 Msa1376260:CDS
TTGTTGAGCGTCCCAGCATA+AGG 0.458690 tig0019789:+49005 None:intergenic
CTGCTTCGGCATATGCATCT+TGG 0.459655 tig0019789:+51211 None:intergenic
TAAAGTTATTCGCGTTCCTC+AGG 0.460172 tig0019789:-53248 Msa1376260:CDS
AAGAAAACTGTGGCACTTGT+TGG 0.460477 tig0019789:-49728 Msa1376260:CDS
GGTCCATTTATTGTTGCTGC+AGG 0.463592 tig0019789:-51276 Msa1376260:CDS
GACTTCGGCGTCGCAGCAAA+TGG 0.466537 tig0019789:-53443 Msa1376260:CDS
GCAGCAAATGGAAGCGGAGG+AGG 0.474705 tig0019789:-53431 Msa1376260:CDS
AATGGAAGCGGAGGAGGAGA+TGG 0.476110 tig0019789:-53425 Msa1376260:CDS
CACGCAAATAACCGAGAGAA+AGG 0.477263 tig0019789:+53364 None:intergenic
CTGCAAGCTACTCTTAGATA+TGG 0.478005 tig0019789:-50215 Msa1376260:CDS
GTCTTCTTGTAGTTGCGAGC+AGG 0.478899 tig0019789:+48532 None:intergenic
GGAAGGTTCTTGGTTATACA+TGG 0.479438 tig0019789:-50107 Msa1376260:CDS
GCTGTATTTCGGCCTTCAGA+TGG 0.482727 tig0019789:-48409 Msa1376260:CDS
GTCCGGAGAATGATGTTCTC+AGG 0.484356 tig0019789:-47770 Msa1376260:CDS
GATCAAAAGACGAGGATGAC+CGG 0.486671 tig0019789:+49870 None:intergenic
GGAGGAGGAGATGGAAGAGA+TGG 0.490662 tig0019789:-53416 Msa1376260:CDS
TCTTGCTTATGTTATCGGCC+TGG 0.491138 tig0019789:-47951 Msa1376260:CDS
CCATAAGAAACCAGTCAAAC+CGG 0.491545 tig0019789:+53335 None:intergenic
CACCTGAGAACATCATTCTC+CGG 0.493426 tig0019789:+47768 None:intergenic
TATTCTCTGCAAGCCTATGA+AGG 0.496123 tig0019789:+51235 None:intergenic
TTTGAATTCCGGTGCTGACT+AGG 0.497978 tig0019789:-53592 Msa1376260:five_prime_UTR
CTCTGCCAGTCTCCAAAATG+AGG 0.498497 tig0019789:+48048 None:intergenic
CTCCAGTAACCTCGTCAAGC+AGG 0.498817 tig0019789:+49074 None:intergenic
AGAAAATGACCGAAAGAGTC+CGG 0.499502 tig0019789:-47787 Msa1376260:CDS
TTCTGTCTTTCAGATTGGCA+GGG 0.500890 tig0019789:-49173 Msa1376260:intron
TCACGATGAATTATTGTCCC+TGG 0.502356 tig0019789:-48897 Msa1376260:CDS
ATACTCAAACTGAGCAAAGC+AGG 0.502837 tig0019789:+49401 None:intergenic
TGGCGGCGCGTGGGTTGACT+CGG 0.505251 tig0019789:+53703 None:intergenic
CCTGAAATCCCTATCTTAAG+TGG 0.507462 tig0019789:-49773 Msa1376260:CDS
ACGCCACCGTGGCGGCGCGT+GGG 0.510467 tig0019789:+53694 None:intergenic
CATTACAACTCTGGGTTGGA+AGG 0.510499 tig0019789:-50124 Msa1376260:CDS
TTAGGATCAGATGTTAAAAG+AGG 0.510653 tig0019789:+48175 None:intergenic
GTAAGATAATTACCTAATGT+TGG 0.511330 tig0019789:+49650 None:intergenic
TATTCGCGTTCCTCAGGAGC+AGG 0.512093 tig0019789:-53242 Msa1376260:CDS
AAGGTGACTTCATCATTCTA+GGG 0.512889 tig0019789:+48449 None:intergenic
GGAGGAGATGGAAGAGATGG+AGG 0.513257 tig0019789:-53413 Msa1376260:CDS
AAGTAGTATTATTCCACTCA+TGG 0.513976 tig0019789:-49687 Msa1376260:CDS
AGTAGAAATTTGTCGCCGCT+TGG 0.514436 tig0019789:+49942 None:intergenic
CGAGAGAAAGGAACAGCAGC+TGG 0.517647 tig0019789:+53376 None:intergenic
TAAATCCAAGGCCAAGCCCT+TGG 0.517816 tig0019789:+50174 None:intergenic
CTCCGGTGGCTCCGAAACCT+CGG 0.519246 tig0019789:+53498 None:intergenic
AAAGGAACAGCAGCTGGCGG+CGG 0.520900 tig0019789:+53382 None:intergenic
GTGCATCGTCAAACATCAAA+TGG 0.523887 tig0019789:-48223 Msa1376260:CDS
CTGACTAGGATCGGAGATGA+TGG 0.523915 tig0019789:-53578 Msa1376260:exon
GCCGATAACATAAGCAAGAA+GGG 0.524730 tig0019789:+47955 None:intergenic
ACTGACTGAACATCAATCTT+GGG 0.529010 tig0019789:+48244 None:intergenic
TTCCGAGGTTTCGGAGCCAC+CGG 0.529131 tig0019789:-53500 Msa1376260:CDS
CCATTTATTGTTGCTGCAGG+AGG 0.529927 tig0019789:-51273 Msa1376260:CDS
TGCATTTACAAATGAAACAT+TGG 0.532255 tig0019789:-50261 Msa1376260:CDS
ATTTCTACTCATTTGATCAA+GGG 0.532444 tig0019789:-49928 Msa1376260:CDS
TACATGGAAAAGCTCACGGC+GGG 0.532539 tig0019789:-50091 Msa1376260:CDS
AAACACAGCACAACACAGCA+CGG 0.535800 tig0019789:+53878 None:intergenic
TGATGACACTCATCACCTGC+GGG 0.536123 tig0019789:-47906 Msa1376260:CDS
GGCCGATAACATAAGCAAGA+AGG 0.538894 tig0019789:+47954 None:intergenic
CACGATGAATTATTGTCCCT+GGG 0.539344 tig0019789:-48896 Msa1376260:CDS
ACCGTTAACACCTGTTTCCG+AGG 0.543254 tig0019789:-53515 Msa1376260:CDS
TCTGCTAAATGTTTGTGAAT+GGG 0.547126 tig0019789:+48141 None:intergenic
TGTTTGATCATTGCCTGCAT+GGG 0.547404 tig0019789:-47866 Msa1376260:CDS
GCAGAAACTCTTTGAAGAGA+AGG 0.547760 tig0019789:+48430 None:intergenic
ACTGAGCAAAGCAGGTTCCT+GGG 0.548759 tig0019789:+49409 None:intergenic
TGTGCATTACAACTCTGGGT+TGG 0.548823 tig0019789:-50128 Msa1376260:CDS
GGCTGAAAGGTCTGTTCAGG+AGG 0.552159 tig0019789:-49038 Msa1376260:CDS
GAAGGTCAACTTGTTGAAAT+GGG 0.552929 tig0019789:-48923 Msa1376260:CDS
GTGTTTGATCATTGCCTGCA+TGG 0.553990 tig0019789:-47867 Msa1376260:CDS
CCCACCACCTGAGAAGATGA+TGG 0.554674 tig0019789:-48350 Msa1376260:CDS
GCATTGATAACATTGGCTAC+AGG 0.555059 tig0019789:-51297 Msa1376260:CDS
AAACTCTATATTTCCTTGCA+CGG 0.557401 tig0019789:+49826 None:intergenic
TCAAGAATTTGAAACTGGAA+TGG 0.559269 tig0019789:-49457 Msa1376260:CDS
GGATATGTTTCATAGGTTCA+AGG 0.561445 tig0019789:-53221 Msa1376260:CDS
GATAAAACCCACTTAAGATA+GGG 0.563522 tig0019789:+49765 None:intergenic
AATTCAAATTTAATATATCA+GGG 0.565015 tig0019789:+47712 None:intergenic
GTTGGATTCTTACCGGAGAA+CGG 0.565490 tig0019789:-51634 Msa1376260:CDS
GCAGATAGCATTGATAACAT+TGG 0.568782 tig0019789:-51304 Msa1376260:CDS
AACTGTCACGATACCCATGC+AGG 0.569402 tig0019789:+47853 None:intergenic
ATATTTCCTTGCACGGACAC+AGG 0.569615 tig0019789:+49833 None:intergenic
AGTGCTCCTGTGTCCGTGCA+AGG 0.569910 tig0019789:-49839 Msa1376260:CDS
GCTCTGGATCTCCTTATGCT+GGG 0.570302 tig0019789:-49016 Msa1376260:CDS
GGTGGTGGGCTCTGTACTTG+TGG 0.572156 tig0019789:+48364 None:intergenic
GATAGTAAGTTGTCACCACC+AGG 0.572453 tig0019789:+47933 None:intergenic
ATTTCTACTTTGGTATAATG+GGG 0.572982 tig0019789:-47811 Msa1376260:CDS
TCATAGAACCGCTCCATGAG+TGG 0.573109 tig0019789:+49674 None:intergenic
TATGCTGTGTTAGGAAGCAT+AGG 0.573427 tig0019789:-48004 Msa1376260:CDS
GACTATTCGAGATGATAAGC+CGG 0.573611 tig0019789:-49889 Msa1376260:CDS
ATATTAATAAGTCTTGTCCA+AGG 0.574767 tig0019789:-50191 Msa1376260:CDS
CTCTTCAATTTGATCCGCTG+TGG 0.577011 tig0019789:+49349 None:intergenic
GGCGTCGCAGCAAATGGAAG+CGG 0.577843 tig0019789:-53437 Msa1376260:CDS
CTGAAATCCCTATCTTAAGT+GGG 0.580207 tig0019789:-49772 Msa1376260:CDS
ATTTGAAACTGGAATGGCTG+AGG 0.588630 tig0019789:-49451 Msa1376260:CDS
GACTGAATTGTGAATCAGAT+CGG 0.590872 tig0019789:+53633 None:intergenic
TATATAGCAGTTATGGAGGA+AGG 0.590982 tig0019789:-48941 Msa1376260:CDS
AGTCAACCCACGCGCCGCCA+CGG 0.591009 tig0019789:-53700 Msa1376260:five_prime_UTR
GTTTGACTGGTTTCTTATGG+TGG 0.591521 tig0019789:-53332 Msa1376260:CDS
TTCATTTGTAAATGCAGACA+AGG 0.592190 tig0019789:+50268 None:intergenic
ATGAACGGTGACGGAGACTC+CGG 0.592451 tig0019789:+53481 None:intergenic
AAGTTAAAGAAGCCATCTGA+AGG 0.595548 tig0019789:+48397 None:intergenic
TGACCACCCGAATAGACCTC+TGG 0.597034 tig0019789:+53552 None:intergenic
ATCAATTCTCCTGCTTGACG+AGG 0.598255 tig0019789:-49083 Msa1376260:CDS
TAAGAGACAACATTGCATAT+GGG 0.599659 tig0019789:-49379 Msa1376260:CDS
AGTGAAAATGAACGAAACAA+AGG 0.602001 tig0019789:-48092 Msa1376260:CDS
ACCATTGTTTATATCGCTGG+TGG 0.602507 tig0019789:-51773 Msa1376260:CDS
GCTGAGGAGCCAAATAGGAC+TGG 0.602832 tig0019789:-49435 Msa1376260:CDS
CCGATGTCCATGAACGGTGA+CGG 0.605429 tig0019789:+53472 None:intergenic
GAGACAACATTGCATATGGG+AGG 0.606543 tig0019789:-49376 Msa1376260:CDS
AGACAACATTGCATATGGGA+GGG 0.608684 tig0019789:-49375 Msa1376260:CDS
ACATCAATCTTGGGTAACTC+GGG 0.609253 tig0019789:+48253 None:intergenic
ATTCCGGTGCTGACTAGGAT+CGG 0.610425 tig0019789:-53587 Msa1376260:five_prime_UTR
GGACATCGGAGGTGAGACTT+CGG 0.611227 tig0019789:-53458 Msa1376260:CDS
CAACAATAATAATTGCTCGA+AGG 0.611770 tig0019789:-48988 Msa1376260:CDS
TCTCCGATCCTAGTCAGCAC+CGG 0.611877 tig0019789:+53584 None:intergenic
TATTAATAAGTCTTGTCCAA+GGG 0.613861 tig0019789:-50190 Msa1376260:CDS
GTCGCAGCAAATGGAAGCGG+AGG 0.614849 tig0019789:-53434 Msa1376260:CDS
AGAGCTACTTCGATGTGAAG+AGG 0.620142 tig0019789:-48861 Msa1376260:CDS
TTTCTACTTTGGTATAATGG+GGG 0.620150 tig0019789:-47810 Msa1376260:CDS
GTTTAAAAGAGGTTTCATGT+TGG 0.621002 tig0019789:-51652 Msa1376260:intron
CAAGCCCATATGTAAATCCA+AGG 0.621024 tig0019789:+50162 None:intergenic
TTTCCAGAGGTCTATTCGGG+TGG 0.623545 tig0019789:-53555 Msa1376260:CDS
TGCTTATGTTATCGGCCTGG+TGG 0.626013 tig0019789:-47948 Msa1376260:CDS
ATGTTAAAAGAGGTGAAACA+GGG 0.626894 tig0019789:+48185 None:intergenic
TCTGCCAGTCTCCAAAATGA+GGG 0.627825 tig0019789:+48049 None:intergenic
AGATAAAGGTTATGATACAC+AGG 0.628381 tig0019789:-49285 Msa1376260:intron
TGAACGAAACAAAGGATGCA+CGG 0.629054 tig0019789:-48084 Msa1376260:CDS
GAGAAAGGAACAGCAGCTGG+CGG 0.630308 tig0019789:+53379 None:intergenic
CCGTCACCGTTCATGGACAT+CGG 0.632405 tig0019789:-53472 Msa1376260:CDS
GTTATACATGGAAAAGCTCA+CGG 0.633111 tig0019789:-50095 Msa1376260:CDS
GGTGTTAACGGTTGCACATG+TGG 0.635631 tig0019789:+53526 None:intergenic
GCTCTGCATATAAGCCACCC+AGG 0.636857 tig0019789:+48879 None:intergenic
CGATTATATAGCAGTTATGG+AGG 0.636978 tig0019789:-48945 Msa1376260:CDS
TGAAACATATCCTGCTCCTG+AGG 0.638696 tig0019789:+53232 None:intergenic
CCAAATAGGACTGGTCACCC+AGG 0.639300 tig0019789:-49426 Msa1376260:CDS
TTGATGACACTCATCACCTG+CGG 0.641594 tig0019789:-47907 Msa1376260:CDS
GTATTATTCCACTCATGGAG+CGG 0.643742 tig0019789:-49682 Msa1376260:CDS
AGGTGACTTCATCATTCTAG+GGG 0.646381 tig0019789:+48450 None:intergenic
GTGCTGTGAAAGTACTATGA+AGG 0.647643 tig0019789:+53852 None:intergenic
AATATGGCTACATTCTTCAG+TGG 0.650090 tig0019789:-51354 Msa1376260:CDS
ATGACACTCATCACCTGCGG+GGG 0.652032 tig0019789:-47904 Msa1376260:CDS
CCGATAACATAAGCAAGAAG+GGG 0.652192 tig0019789:+47956 None:intergenic
AACGGTGACGGAGACTCCGG+TGG 0.652730 tig0019789:+53484 None:intergenic
TCACCTCCGATGTCCATGAA+CGG 0.654055 tig0019789:+53466 None:intergenic
CACAGCGGATCAAATTGAAG+AGG 0.655221 tig0019789:-49348 Msa1376260:CDS
CAACCCACGCGCCGCCACGG+TGG 0.658778 tig0019789:-53697 Msa1376260:five_prime_UTR
CTGCTTGACGAGGTTACTGG+AGG 0.662037 tig0019789:-49073 Msa1376260:CDS
AGGCCACTAAACTTCCAAAG+AGG 0.663519 tig0019789:-48841 Msa1376260:intron
GGTGGTTGGTTCTATCGCTG+CGG 0.674740 tig0019789:-53314 Msa1376260:CDS
ACATGGAAAAGCTCACGGCG+GGG 0.678328 tig0019789:-50090 Msa1376260:CDS
ACCACCAGCGATATAAACAA+TGG 0.679339 tig0019789:+51772 None:intergenic
GGTTGGTTCTATCGCTGCGG+CGG 0.680433 tig0019789:-53311 Msa1376260:CDS
CTCTGCATATAAGCCACCCA+GGG 0.681231 tig0019789:+48880 None:intergenic
TATGTTTCATAGGTTCAAGG+AGG 0.689230 tig0019789:-53218 Msa1376260:intron
GATGAATTATTGTCCCTGGG+TGG 0.689606 tig0019789:-48893 Msa1376260:CDS
TCAAATTTAATATATCAGGG+TGG 0.690519 tig0019789:+47715 None:intergenic
ACAAAGGATGCACGGCATCG+AGG 0.691236 tig0019789:-48076 Msa1376260:CDS
TCGGAGATGATGGTTTCCAG+AGG 0.696980 tig0019789:-53568 Msa1376260:exon
TCACCGTTCATGGACATCGG+AGG 0.699092 tig0019789:-53469 Msa1376260:CDS
TGACACTCATCACCTGCGGG+GGG 0.706696 tig0019789:-47903 Msa1376260:CDS
GATGACACTCATCACCTGCG+GGG 0.707339 tig0019789:-47905 Msa1376260:CDS
TGTTAAAAGAGGTGAAACAG+GGG 0.708654 tig0019789:+48186 None:intergenic
TCCGTCGTGATCAAAAGACG+AGG 0.725275 tig0019789:+49862 None:intergenic
AGTTCCTGCTAAGAAAACTG+TGG 0.737213 tig0019789:-49738 Msa1376260:CDS
GTTAACGGTTGCACATGTGG+TGG 0.753080 tig0019789:+53529 None:intergenic
ATTAAGGGGATTAAACCAAG+CGG 0.757017 tig0019789:-49957 Msa1376260:intron
ATATGGGAGGGATACCACAG+CGG 0.794678 tig0019789:-49363 Msa1376260:CDS
ATACATGGAAAAGCTCACGG+CGG 0.795535 tig0019789:-50092 Msa1376260:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATTATTATTTTTTAAAT+GGG + tig0019789:49770-49789 None:intergenic 0.0%
!! TGACAAAAATAAATATAATT+AGG - tig0019789:49450-49469 Msa1376260:CDS 10.0%
!! AAAAAATAATAATATTCTGT+AGG - tig0019789:49774-49793 Msa1376260:CDS 10.0%
!! GTTAAAATTATTAATATCTT+CGG - tig0019789:51121-51140 Msa1376260:intron 10.0%
!! ATGTATAATAAATTAACTAT+GGG + tig0019789:51181-51200 None:intergenic 10.0%
!! GAAAAGAAAAAAAAAATTAT+AGG + tig0019789:52408-52427 None:intergenic 10.0%
!! TTTATGGAAAATATAATAAA+TGG - tig0019789:52885-52904 Msa1376260:intron 10.0%
!!! TTTTTTCAATTTTTGAATTC+CGG - tig0019789:48048-48067 Msa1376260:CDS 15.0%
!! AAAGCATGAATAATATTATT+AGG + tig0019789:50669-50688 None:intergenic 15.0%
!! ATAATATTATTCATGCTTTA+AGG - tig0019789:50670-50689 Msa1376260:intron 15.0%
!! TAATATTATTCATGCTTTAA+GGG - tig0019789:50671-50690 Msa1376260:intron 15.0%
!!! CTGTTTTATTTATTATGTTA+TGG - tig0019789:50763-50782 Msa1376260:intron 15.0%
!! ATTAAATTGTACAAATACAT+AGG - tig0019789:51099-51118 Msa1376260:intron 15.0%
!! CATGTATAATAAATTAACTA+TGG + tig0019789:51182-51201 None:intergenic 15.0%
!! CATTTATTTAATTGTAAGAT+TGG - tig0019789:51241-51260 Msa1376260:CDS 15.0%
!! TTCATCAAAATCAAATATAA+AGG + tig0019789:51295-51314 None:intergenic 15.0%
!! AATAAGAAAATATAGAAGTT+GGG + tig0019789:51639-51658 None:intergenic 15.0%
!! AAATAAGAAAATATAGAAGT+TGG + tig0019789:51640-51659 None:intergenic 15.0%
!!! AAAAACAAATATTTTGATAG+CGG - tig0019789:52916-52935 Msa1376260:intron 15.0%
!!! ATTTTTTCTATCGAAGTTTT+CGG + tig0019789:47862-47881 None:intergenic 20.0%
!!! ATTGGTTTTTCATGAAAATT+AGG - tig0019789:48585-48604 Msa1376260:intron 20.0%
!! TGATATATTTCCCAATATTA+GGG + tig0019789:49141-49160 None:intergenic 20.0%
!! TTGATATATTTCCCAATATT+AGG + tig0019789:49142-49161 None:intergenic 20.0%
!!! GTTTTGGTAATTTTTGTTTA+CGG + tig0019789:49423-49442 None:intergenic 20.0%
!!! TTTTTGTCAATAATCTGTTT+TGG + tig0019789:49439-49458 None:intergenic 20.0%
!! AAATATAATTAGGATTCTAG+TGG - tig0019789:49460-49479 Msa1376260:CDS 20.0%
!! AATATAATTAGGATTCTAGT+GGG - tig0019789:49461-49480 Msa1376260:CDS 20.0%
!!! ATAGATTATGTTTTAAAACC+TGG - tig0019789:49695-49714 Msa1376260:CDS 20.0%
!! TACCAATTTAATTATTCTGA+AGG - tig0019789:49741-49760 Msa1376260:CDS 20.0%
!!! TTTTCTTTCTTGTTTAAAAG+AGG - tig0019789:49988-50007 Msa1376260:intron 20.0%
!! TTTGATACTTATGGAAATAA+CGG - tig0019789:50100-50119 Msa1376260:CDS 20.0%
!! TGCAAATTTATTATTCTTTG+TGG - tig0019789:50199-50218 Msa1376260:CDS 20.0%
!! TGGGAATTATATTCATAATA+TGG - tig0019789:50281-50300 Msa1376260:CDS 20.0%
!!! TTATTGCTTTTATCAATTGT+TGG - tig0019789:50325-50344 Msa1376260:intron 20.0%
!! TATCAAATATATTCCTTCAT+AGG - tig0019789:50403-50422 Msa1376260:intron 20.0%
!!! GATCTTTTGTTCATTTAAAT+TGG - tig0019789:50843-50862 Msa1376260:intron 20.0%
!! TTTATCAATACCCTTATTAA+TGG + tig0019789:51069-51088 None:intergenic 20.0%
!!! TTATACATGTAATAGTTTTG+AGG - tig0019789:51193-51212 Msa1376260:intron 20.0%
!!! TATTTTTGTTACTGGATTAA+GGG - tig0019789:51679-51698 Msa1376260:intron 20.0%
!! TTTATCTAATGAACTGATAA+AGG + tig0019789:52353-52372 None:intergenic 20.0%
!! TTTATCAGTTCATTAGATAA+AGG - tig0019789:52352-52371 Msa1376260:intron 20.0%
!! AAATCAGTGTTCTTCTTTTT+AGG - tig0019789:48491-48510 Msa1376260:CDS 25.0%
!!! AGAAATCACTTTATTTTCAC+TGG + tig0019789:48527-48546 None:intergenic 25.0%
! TTGGTTAAGTGTTAAGAAAA+TGG - tig0019789:48728-48747 Msa1376260:intron 25.0%
!!! AAAGCTAGTCTTTTATTAGT+TGG - tig0019789:48844-48863 Msa1376260:CDS 25.0%
!!! AAGCTAGTCTTTTATTAGTT+GGG - tig0019789:48845-48864 Msa1376260:CDS 25.0%
!!! AATAAGATACTGTTTTAGAG+AGG + tig0019789:48905-48924 None:intergenic 25.0%
! CTAAAACAGTATCTTATTGT+AGG - tig0019789:48907-48926 Msa1376260:CDS 25.0%
! ATAATTGTGTGTTTGAACAA+TGG - tig0019789:49046-49065 Msa1376260:CDS 25.0%
! TTACTAGTAAACCCTAATAT+TGG - tig0019789:49127-49146 Msa1376260:CDS 25.0%
! TACTAGTAAACCCTAATATT+GGG - tig0019789:49128-49147 Msa1376260:CDS 25.0%
! CAAAAAAGTTGAATCACAAT+GGG + tig0019789:49379-49398 None:intergenic 25.0%
! ACAAAAAAGTTGAATCACAA+TGG + tig0019789:49380-49399 None:intergenic 25.0%
!!! GTAATTTTTGTTTACGGTAT+GGG + tig0019789:49417-49436 None:intergenic 25.0%
! AATAGTGACATAATTTAACG+TGG - tig0019789:49654-49673 Msa1376260:intron 25.0%
! GTCCTTCAGAATAATTAAAT+TGG + tig0019789:49746-49765 None:intergenic 25.0%
!!! AACATATTTTGATCTGATGA+CGG + tig0019789:50050-50069 None:intergenic 25.0%
! TATCAAAGAAACTCATATCT+TGG + tig0019789:50087-50106 None:intergenic 25.0%
! ATGAGTTTCTTTGATACTTA+TGG - tig0019789:50091-50110 Msa1376260:CDS 25.0%
!!! TTATTGACTTCTAATGATAC+AGG - tig0019789:50257-50276 Msa1376260:CDS 25.0%
! GCATTGAATTATTGAACAAA+TGG - tig0019789:50511-50530 Msa1376260:intron 25.0%
! TTAAAATCAAAATCCACCAT+TGG + tig0019789:50576-50595 None:intergenic 25.0%
! TTTAACATGTAGTGAAAGAA+AGG - tig0019789:50591-50610 Msa1376260:intron 25.0%
! AGTCTTTCATATCATGTATT+TGG - tig0019789:50631-50650 Msa1376260:intron 25.0%
!!! ACAACAATTTTTGAGAGAAA+CGG - tig0019789:50821-50840 Msa1376260:intron 25.0%
! ATGTTTCATGAATTATGTCA+TGG + tig0019789:50878-50897 None:intergenic 25.0%
! AAATATTCTGCTTGTAGTTA+TGG - tig0019789:50931-50950 Msa1376260:intron 25.0%
!!! TCCTACTTTTTAGCATAAAT+GGG - tig0019789:51027-51046 Msa1376260:intron 25.0%
! TGCATTTACAAATGAAACAT+TGG - tig0019789:51390-51409 Msa1376260:intron 25.0%
!! ATATTAATAAGTCTTGTCCA+AGG - tig0019789:51460-51479 Msa1376260:intron 25.0%
!! TATTAATAAGTCTTGTCCAA+GGG - tig0019789:51461-51480 Msa1376260:intron 25.0%
!!! TTCCTTACTATTTTTGTTAC+TGG - tig0019789:51671-51690 Msa1376260:intron 25.0%
! ATCCAGTAACAAAAATAGTA+AGG + tig0019789:51676-51695 None:intergenic 25.0%
!!! CTATTTTTGTTACTGGATTA+AGG - tig0019789:51678-51697 Msa1376260:intron 25.0%
!! ATTTTTGTTACTGGATTAAG+GGG - tig0019789:51680-51699 Msa1376260:intron 25.0%
! AATTTCTACTCATTTGATCA+AGG - tig0019789:51722-51741 Msa1376260:intron 25.0%
! ATTTCTACTCATTTGATCAA+GGG - tig0019789:51723-51742 Msa1376260:intron 25.0%
! GTAAGATAATTACCTAATGT+TGG + tig0019789:52004-52023 None:intergenic 25.0%
! TCTCATTCAAATTACTCTAT+AGG - tig0019789:52048-52067 Msa1376260:intron 25.0%
!! ATTTTCCAATTTGTGATTTC+AGG - tig0019789:52145-52164 Msa1376260:intron 25.0%
!! AAACATCAAGAATTTGAAAC+TGG - tig0019789:52189-52208 Msa1376260:intron 25.0%
!!! TTGCACTATTGTCTTTTTTA+TGG - tig0019789:52869-52888 Msa1376260:intron 25.0%
! AATTCATCAGAATAACTATC+TGG + tig0019789:53536-53555 None:intergenic 25.0%
!! TTTTTACAGCATTTCTACTT+TGG - tig0019789:53830-53849 Msa1376260:five_prime_UTR 25.0%
! CATTTCTACTTTGGTATAAT+GGG - tig0019789:53839-53858 Msa1376260:five_prime_UTR 25.0%
! ATTTCTACTTTGGTATAATG+GGG - tig0019789:53840-53859 Msa1376260:five_prime_UTR 25.0%
GTTTGATGTGTTTGAAGAAT+TGG - tig0019789:48567-48586 Msa1376260:intron 30.0%
! GGTTTTTCATGAAAATTAGG+TGG - tig0019789:48588-48607 Msa1376260:intron 30.0%
GAGTAATACTGGAAATTGTT+TGG - tig0019789:48687-48706 Msa1376260:intron 30.0%
!!! GTTGTTCTTTTAGCTTTAGT+TGG - tig0019789:48709-48728 Msa1376260:intron 30.0%
GTGTTAAGAAAATGGAGAAT+TGG - tig0019789:48736-48755 Msa1376260:intron 30.0%
!!! AGCTAGTCTTTTATTAGTTG+GGG - tig0019789:48846-48865 Msa1376260:CDS 30.0%
! AAAGGAAGGGTAATTTTCAA+AGG - tig0019789:48998-49017 Msa1376260:CDS 30.0%
! AAGGAAGGGTAATTTTCAAA+GGG - tig0019789:48999-49018 Msa1376260:CDS 30.0%
!! TTTTCAAAGGGAGTTGATTT+AGG - tig0019789:49011-49030 Msa1376260:CDS 30.0%
!! ATTTAGGTTGAATTCATGCT+TGG + tig0019789:49195-49214 None:intergenic 30.0%
AATATTTAGCACTCCTCTTA+CGG + tig0019789:49219-49238 None:intergenic 30.0%
!! AAGAGGAGTGCTAAATATTA+CGG - tig0019789:49220-49239 Msa1376260:intron 30.0%
!! GGTAATTTTTGTTTACGGTA+TGG + tig0019789:49418-49437 None:intergenic 30.0%
ACACTACTAAACCCTAATAT+TGG - tig0019789:49493-49512 Msa1376260:intron 30.0%
ATTGTCGCAATCCAATATTA+GGG + tig0019789:49507-49526 None:intergenic 30.0%
ACAATCTTACCTTTAAACAC+AGG - tig0019789:49522-49541 Msa1376260:intron 30.0%
AATGTTGAATACCAATGTGA+TGG + tig0019789:49571-49590 None:intergenic 30.0%
!!! ATGTTTTAAAACCTGGTTCT+TGG - tig0019789:49702-49721 Msa1376260:CDS 30.0%
GAAAGAAAAATAAGAACAGC+AGG + tig0019789:49977-49996 None:intergenic 30.0%
GTTTAAAAGAGGTTTCATGT+TGG - tig0019789:49999-50018 Msa1376260:intron 30.0%
CATTCAATGTATCATTCCAA+TGG - tig0019789:50557-50576 Msa1376260:intron 30.0%
TGTTATGGAAATAGAAATGC+TGG - tig0019789:50778-50797 Msa1376260:intron 30.0%
AATTGTTGTCATCTCAGTAA+CGG + tig0019789:50810-50829 None:intergenic 30.0%
TTTCACCATATACATGTCAT+GGG + tig0019789:50991-51010 None:intergenic 30.0%
!!! CTCCTACTTTTTAGCATAAA+TGG - tig0019789:51026-51045 Msa1376260:intron 30.0%
TCCCATTTATGCTAAAAAGT+AGG + tig0019789:51031-51050 None:intergenic 30.0%
!! TACTTTTTAGCATAAATGGG+AGG - tig0019789:51030-51049 Msa1376260:intron 30.0%
!! ACTTTTTAGCATAAATGGGA+GGG - tig0019789:51031-51050 Msa1376260:intron 30.0%
TAGGATTAGGCCATTAATAA+GGG - tig0019789:51056-51075 Msa1376260:intron 30.0%
!!! TAGTTTTGAGGTTTACTCTA+TGG - tig0019789:51205-51224 Msa1376260:CDS 30.0%
TTCATTTGTAAATGCAGACA+AGG + tig0019789:51386-51405 None:intergenic 30.0%
TATCATCTCGAATAGTCTAT+AGG + tig0019789:51759-51778 None:intergenic 30.0%
AAACTCTATATTTCCTTGCA+CGG + tig0019789:51828-51847 None:intergenic 30.0%
TGCAAGGAAATATAGAGTTT+CGG - tig0019789:51828-51847 Msa1376260:intron 30.0%
GATAAAACCCACTTAAGATA+GGG + tig0019789:51889-51908 None:intergenic 30.0%
AGATAAAACCCACTTAAGAT+AGG + tig0019789:51890-51909 None:intergenic 30.0%
AAGTAGTATTATTCCACTCA+TGG - tig0019789:51964-51983 Msa1376260:intron 30.0%
! ATTTTCCAATCTATGCTTTC+AGG - tig0019789:52089-52108 Msa1376260:intron 30.0%
! TCAAGAATTTGAAACTGGAA+TGG - tig0019789:52194-52213 Msa1376260:intron 30.0%
ATAAGAGACAACATTGCATA+TGG - tig0019789:52271-52290 Msa1376260:intron 30.0%
TAAGAGACAACATTGCATAT+GGG - tig0019789:52272-52291 Msa1376260:intron 30.0%
AGATAAAGGTTATGATACAC+AGG - tig0019789:52366-52385 Msa1376260:intron 30.0%
CAACAATAATAATTGCTCGA+AGG - tig0019789:52663-52682 Msa1376260:intron 30.0%
CTCCATAACTGCTATATAAT+CGG + tig0019789:52708-52727 None:intergenic 30.0%
GTATTTGTTTATTGTCATGC+AGG - tig0019789:53093-53112 Msa1376260:intron 30.0%
CTGAAGAATCTTTCTCAATT+TGG + tig0019789:53154-53173 None:intergenic 30.0%
AAAGAGTTTCTGCTGTATTT+CGG - tig0019789:53231-53250 Msa1376260:CDS 30.0%
ATGTTAAAAGAGGTGAAACA+GGG + tig0019789:53469-53488 None:intergenic 30.0%
TTAGGATCAGATGTTAAAAG+AGG + tig0019789:53479-53498 None:intergenic 30.0%
TCTGCTAAATGTTTGTGAAT+GGG + tig0019789:53513-53532 None:intergenic 30.0%
AGTGAAAATGAACGAAACAA+AGG - tig0019789:53559-53578 Msa1376260:CDS 30.0%
GTAGAAATGCTGTAAAAAGT+TGG + tig0019789:53828-53847 None:intergenic 30.0%
GCATTTCTACTTTGGTATAA+TGG - tig0019789:53838-53857 Msa1376260:five_prime_UTR 30.0%
TTTCTACTTTGGTATAATGG+GGG - tig0019789:53841-53860 Msa1376260:five_prime_UTR 30.0%
!!! GGGTGTTTTGGTAAATTGAT+TGG + tig0019789:47734-47753 None:intergenic 35.0%
!!! AAATGGAAGAAAGGGTGTTT+TGG + tig0019789:47746-47765 None:intergenic 35.0%
GAGCTGAAAAATGGAAGAAA+GGG + tig0019789:47754-47773 None:intergenic 35.0%
! TTCTATCGAAGTTTTCGGTT+AGG + tig0019789:47857-47876 None:intergenic 35.0%
!!! GGTAACTACTTTTTCTGTTG+GGG + tig0019789:48000-48019 None:intergenic 35.0%
!!! CGGTAACTACTTTTTCTGTT+GGG + tig0019789:48001-48020 None:intergenic 35.0%
!!! TCGGTAACTACTTTTTCTGT+TGG + tig0019789:48002-48021 None:intergenic 35.0%
GACTGAATTGTGAATCAGAT+CGG + tig0019789:48021-48040 None:intergenic 35.0%
GGATATGTTTCATAGGTTCA+AGG - tig0019789:48430-48449 Msa1376260:CDS 35.0%
TATGTTTCATAGGTTCAAGG+AGG - tig0019789:48433-48452 Msa1376260:CDS 35.0%
!! AGGTGGACTATTATAGTATG+TGG - tig0019789:48605-48624 Msa1376260:intron 35.0%
TATTACTCTCAAATAGCTCG+AGG + tig0019789:48675-48694 None:intergenic 35.0%
GAGCTATTTGAGAGTAATAC+TGG - tig0019789:48676-48695 Msa1376260:intron 35.0%
AGAATCTAGAGAGAAGGATT+AGG - tig0019789:48765-48784 Msa1376260:intron 35.0%
GAATCTAGAGAGAAGGATTA+GGG - tig0019789:48766-48785 Msa1376260:intron 35.0%
AATCTAGAGAGAAGGATTAG+GGG - tig0019789:48767-48786 Msa1376260:intron 35.0%
GTTTGTCGACCAAATTATGA+CGG - tig0019789:48807-48826 Msa1376260:intron 35.0%
CAATCTCATCCGTCATAATT+TGG + tig0019789:48819-48838 None:intergenic 35.0%
!!! GCTAGTCTTTTATTAGTTGG+GGG - tig0019789:48847-48866 Msa1376260:CDS 35.0%
TTTCATTGGGGTTATGTCAA+AGG - tig0019789:48980-48999 Msa1376260:CDS 35.0%
ACAATGGATGTGATCAATCA+AGG - tig0019789:49062-49081 Msa1376260:CDS 35.0%
TTCAACCTAAATACCGTAAG+AGG - tig0019789:49203-49222 Msa1376260:intron 35.0%
TTCCTCACGAATTTCACAAA+CGG - tig0019789:49249-49268 Msa1376260:intron 35.0%
CATATAGTTACTTCCCACTT+TGG - tig0019789:49301-49320 Msa1376260:CDS 35.0%
ATGGAGGGGTAAAATTGAAA+TGG - tig0019789:49332-49351 Msa1376260:CDS 35.0%
AATGGTCCTATCATACTTGT+TGG - tig0019789:49350-49369 Msa1376260:CDS 35.0%
ATTAGGGTTTAGTAGTGTGA+TGG + tig0019789:49491-49510 None:intergenic 35.0%
GATTGTCGCAATCCAATATT+AGG + tig0019789:49508-49527 None:intergenic 35.0%
TCAACAAAGCCTGTGTTTAA+AGG + tig0019789:49534-49553 None:intergenic 35.0%
ACAGACAACAATTACGTTGA+AGG - tig0019789:49629-49648 Msa1376260:intron 35.0%
CATAATCTATAGTCCGTTGT+AGG + tig0019789:49685-49704 None:intergenic 35.0%
ACATCTGAGTCACAAACAAT+GGG + tig0019789:49801-49820 None:intergenic 35.0%
AACATCTGAGTCACAAACAA+TGG + tig0019789:49802-49821 None:intergenic 35.0%
TGCAAAAGAAACAACAGCAA+GGG + tig0019789:49848-49867 None:intergenic 35.0%
TTGACCATTGTTTATATCGC+TGG - tig0019789:49875-49894 Msa1376260:CDS 35.0%
GTTTCATGTTGGATTCTTAC+CGG - tig0019789:50010-50029 Msa1376260:intron 35.0%
TGACTTCTAATGATACAGGT+TGG - tig0019789:50261-50280 Msa1376260:CDS 35.0%
GACTTCTAATGATACAGGTT+GGG - tig0019789:50262-50281 Msa1376260:CDS 35.0%
AATATGGCTACATTCTTCAG+TGG - tig0019789:50297-50316 Msa1376260:intron 35.0%
!! GCAGATAGCATTGATAACAT+TGG - tig0019789:50347-50366 Msa1376260:intron 35.0%
TCAATGTATCATTCCAATGG+TGG - tig0019789:50560-50579 Msa1376260:intron 35.0%
CTTTCACCATATACATGTCA+TGG + tig0019789:50992-51011 None:intergenic 35.0%
GACATGTATATGGTGAAAGA+AGG - tig0019789:50993-51012 Msa1376260:intron 35.0%
GTAGGATTAGGCCATTAATA+AGG - tig0019789:51055-51074 Msa1376260:intron 35.0%
! TTTGAGGTTTACTCTATGGT+TGG - tig0019789:51209-51228 Msa1376260:CDS 35.0%
ATGAATTATTCATGTGCCGT+TGG - tig0019789:51310-51329 Msa1376260:CDS 35.0%
TTATACACACTCAGAACCAA+CGG + tig0019789:51329-51348 None:intergenic 35.0%
!! TTGGCCTTGGATTTACATAT+GGG - tig0019789:51485-51504 Msa1376260:intron 35.0%
TTCTTGTGCATTACAACTCT+GGG - tig0019789:51519-51538 Msa1376260:CDS 35.0%
GTTATACATGGAAAAGCTCA+CGG - tig0019789:51556-51575 Msa1376260:CDS 35.0%
ATTAAGGGGATTAAACCAAG+CGG - tig0019789:51694-51713 Msa1376260:intron 35.0%
CACTTAAGATAGGGATTTCA+GGG + tig0019789:51880-51899 None:intergenic 35.0%
CTGAAATCCCTATCTTAAGT+GGG - tig0019789:51879-51898 Msa1376260:intron 35.0%
! TCAGGAGAAGTTCTTTTAGA+TGG - tig0019789:52107-52126 Msa1376260:intron 35.0%
CTTCTCCTGAAATCACAAAT+TGG + tig0019789:52153-52172 None:intergenic 35.0%
! TCAGGAGAAGTTCTTTTAGA+TGG - tig0019789:52107-52126 Msa1376260:intron 35.0%
! TGCCGATTATATAGCAGTTA+TGG - tig0019789:52703-52722 Msa1376260:intron 35.0%
CGATTATATAGCAGTTATGG+AGG - tig0019789:52706-52725 Msa1376260:intron 35.0%
TATATAGCAGTTATGGAGGA+AGG - tig0019789:52710-52729 Msa1376260:intron 35.0%
!! GAAGGTCAACTTGTTGAAAT+GGG - tig0019789:52728-52747 Msa1376260:intron 35.0%
AAGACAATAGTGCAAAGCAA+AGG + tig0019789:52864-52883 None:intergenic 35.0%
!! ATCGCGTTCTAAACAGTTTT+CGG - tig0019789:53043-53062 Msa1376260:intron 35.0%
CGGGATTTCAAAAGTGATAT+AGG - tig0019789:53063-53082 Msa1376260:intron 35.0%
AAGGTGACTTCATCATTCTA+GGG + tig0019789:53205-53224 None:intergenic 35.0%
AAGTTAAAGAAGCCATCTGA+AGG + tig0019789:53257-53276 None:intergenic 35.0%
! TTTTATTGACGGCTCTTTCT+CGG + tig0019789:53351-53370 None:intergenic 35.0%
AGAAAGAGCCGTCAATAAAA+AGG - tig0019789:53351-53370 Msa1376260:CDS 35.0%
! CTATCCTGCCTTTTTATTGA+CGG + tig0019789:53362-53381 None:intergenic 35.0%
AACATCAATCTTGGGTAACT+CGG + tig0019789:53402-53421 None:intergenic 35.0%
ACTGACTGAACATCAATCTT+GGG + tig0019789:53410-53429 None:intergenic 35.0%
TGTTAAAAGAGGTGAAACAG+GGG + tig0019789:53468-53487 None:intergenic 35.0%
GATGTTAAAAGAGGTGAAAC+AGG + tig0019789:53470-53489 None:intergenic 35.0%
GTCTGCTAAATGTTTGTGAA+TGG + tig0019789:53514-53533 None:intergenic 35.0%
GGAGCTGAAAAATGGAAGAA+AGG + tig0019789:47755-47774 None:intergenic 40.0%
!! GTGCTGTGAAAGTACTATGA+AGG + tig0019789:47802-47821 None:intergenic 40.0%
! ATCGAAGTTTTCGGTTAGGA+AGG + tig0019789:47853-47872 None:intergenic 40.0%
ATGGTTTCCAGAGGTCTATT+CGG - tig0019789:48092-48111 Msa1376260:CDS 40.0%
CCATAAGAAACCAGTCAAAC+CGG + tig0019789:48319-48338 None:intergenic 40.0%
!! GTTTGACTGGTTTCTTATGG+TGG - tig0019789:48319-48338 Msa1376260:CDS 40.0%
TAAAGTTATTCGCGTTCCTC+AGG - tig0019789:48403-48422 Msa1376260:CDS 40.0%
AGGAGCAGGATATGTTTCAT+AGG - tig0019789:48423-48442 Msa1376260:CDS 40.0%
CAGTTAGGTTTAGTGTTTCC+TGG - tig0019789:48947-48966 Msa1376260:CDS 40.0%
TTAGGTTTAGTGTTTCCTGG+AGG - tig0019789:48950-48969 Msa1376260:CDS 40.0%
TGGAGGATTGAGGTTTCATT+GGG - tig0019789:48967-48986 Msa1376260:CDS 40.0%
ATTGGGGTTATGTCAAAGGA+AGG - tig0019789:48984-49003 Msa1376260:CDS 40.0%
TTGGGGTTATGTCAAAGGAA+GGG - tig0019789:48985-49004 Msa1376260:CDS 40.0%
TGTGATCAATCAAGGACCAT+TGG - tig0019789:49070-49089 Msa1376260:CDS 40.0%
AAGGACCATTGGATCAACTA+GGG - tig0019789:49081-49100 Msa1376260:CDS 40.0%
!! AGGAGTGCTAAATATTACGG+AGG - tig0019789:49223-49242 Msa1376260:intron 40.0%
TCCTCACGAATTTCACAAAC+GGG - tig0019789:49250-49269 Msa1376260:intron 40.0%
ATAGTTACTTCCCACTTTGG+TGG - tig0019789:49304-49323 Msa1376260:CDS 40.0%
TCCATGATTTCCACCAAAGT+GGG + tig0019789:49317-49336 None:intergenic 40.0%
ACTTTGGTGGAAATCATGGA+GGG - tig0019789:49317-49336 Msa1376260:CDS 40.0%
TAACGTGGTTTGACCTACAA+CGG - tig0019789:49669-49688 Msa1376260:CDS 40.0%
CTGCAAAAGAAACAACAGCA+AGG + tig0019789:49849-49868 None:intergenic 40.0%
ACCATTGTTTATATCGCTGG+TGG - tig0019789:49878-49897 Msa1376260:CDS 40.0%
ACCACCAGCGATATAAACAA+TGG + tig0019789:49882-49901 None:intergenic 40.0%
!! GTTTTTGTTGCTGGTTGGAT+TGG - tig0019789:49902-49921 Msa1376260:CDS 40.0%
! GCATTGATAACATTGGCTAC+AGG - tig0019789:50354-50373 Msa1376260:intron 40.0%
TATTCTCTGCAAGCCTATGA+AGG + tig0019789:50419-50438 None:intergenic 40.0%
AATAACCTGTTCAGCAATGC+TGG + tig0019789:50466-50485 None:intergenic 40.0%
! AGGGTCTTACATTTTGTGAC+TGG - tig0019789:50690-50709 Msa1376260:intron 40.0%
! GGGTCTTACATTTTGTGACT+GGG - tig0019789:50691-50710 Msa1376260:intron 40.0%
! TTTTGTGACTGGGCATCTAA+AGG - tig0019789:50701-50720 Msa1376260:intron 40.0%
TTTGTGACTGGGCATCTAAA+GGG - tig0019789:50702-50721 Msa1376260:intron 40.0%
GGAAATAGAAATGCTGGACA+TGG - tig0019789:50784-50803 Msa1376260:intron 40.0%
ACATGTCATGGGTGGTAAAA+AGG + tig0019789:50980-50999 None:intergenic 40.0%
TACCACCCATGACATGTATA+TGG - tig0019789:50983-51002 Msa1376260:intron 40.0%
AGGTTTACTCTATGGTTGGA+AGG - tig0019789:51213-51232 Msa1376260:CDS 40.0%
TGTATAATTTCTTGCGACGC+AGG - tig0019789:51342-51361 Msa1376260:CDS 40.0%
CTGCAAGCTACTCTTAGATA+TGG - tig0019789:51436-51455 Msa1376260:intron 40.0%
!! CTTGGCCTTGGATTTACATA+TGG - tig0019789:51484-51503 Msa1376260:intron 40.0%
CAAGCCCATATGTAAATCCA+AGG + tig0019789:51492-51511 None:intergenic 40.0%
GTTCTTGTGCATTACAACTC+TGG - tig0019789:51518-51537 Msa1376260:CDS 40.0%
GGAAGGTTCTTGGTTATACA+TGG - tig0019789:51544-51563 Msa1376260:CDS 40.0%
!! CTGTTTGCTGTCATTCTAAG+TGG - tig0019789:51598-51617 Msa1376260:CDS 40.0%
GACTATTCGAGATGATAAGC+CGG - tig0019789:51762-51781 Msa1376260:CDS 40.0%
CCACTTAAGATAGGGATTTC+AGG + tig0019789:51881-51900 None:intergenic 40.0%
CCTGAAATCCCTATCTTAAG+TGG - tig0019789:51878-51897 Msa1376260:intron 40.0%
AGTTCCTGCTAAGAAAACTG+TGG - tig0019789:51913-51932 Msa1376260:intron 40.0%
AAGAAAACTGTGGCACTTGT+TGG - tig0019789:51923-51942 Msa1376260:intron 40.0%
GTATTATTCCACTCATGGAG+CGG - tig0019789:51969-51988 Msa1376260:intron 40.0%
CGGTTCTATGATCCAACATT+AGG - tig0019789:51989-52008 Msa1376260:intron 40.0%
GCATGAATATGCACTGTGAA+GGG + tig0019789:52026-52045 None:intergenic 40.0%
AGCATGAATATGCACTGTGA+AGG + tig0019789:52027-52046 None:intergenic 40.0%
! CTTCTCCTGAAAGCATAGAT+TGG + tig0019789:52097-52116 None:intergenic 40.0%
! ATTTGAAACTGGAATGGCTG+AGG - tig0019789:52200-52219 Msa1376260:intron 40.0%
ATACTCAAACTGAGCAAAGC+AGG + tig0019789:52253-52272 None:intergenic 40.0%
AGACAACATTGCATATGGGA+GGG - tig0019789:52276-52295 Msa1376260:intron 40.0%
TTCTGTCTTTCAGATTGGCA+GGG - tig0019789:52478-52497 Msa1376260:intron 40.0%
! TACTGGAGGACTTGATTTTG+AGG - tig0019789:52592-52611 Msa1376260:intron 40.0%
!!! GACTTGATTTTGAGGCTGAA+AGG - tig0019789:52600-52619 Msa1376260:intron 40.0%
!! GGAAGGTCAACTTGTTGAAA+TGG - tig0019789:52727-52746 Msa1376260:intron 40.0%
TCACGATGAATTATTGTCCC+TGG - tig0019789:52754-52773 Msa1376260:intron 40.0%
CACGATGAATTATTGTCCCT+GGG - tig0019789:52755-52774 Msa1376260:intron 40.0%
! AGACCTCTTTGGAAGTTTAG+TGG + tig0019789:52816-52835 None:intergenic 40.0%
CATGCAGTATTAGACCTCTT+TGG + tig0019789:52827-52846 None:intergenic 40.0%
!! TCGCGTTCTAAACAGTTTTC+GGG - tig0019789:53044-53063 Msa1376260:intron 40.0%
! TTCATCATTCTAGGGGATGA+TGG + tig0019789:53197-53216 None:intergenic 40.0%
AGGTGACTTCATCATTCTAG+GGG + tig0019789:53204-53223 None:intergenic 40.0%
GAAGGTGACTTCATCATTCT+AGG + tig0019789:53206-53225 None:intergenic 40.0%
! GCAGAAACTCTTTGAAGAGA+AGG + tig0019789:53224-53243 None:intergenic 40.0%
! TTTTCCATCATCTTCTCAGG+TGG + tig0019789:53308-53327 None:intergenic 40.0%
! CCATTTTCCATCATCTTCTC+AGG + tig0019789:53311-53330 None:intergenic 40.0%
!! CCTGAGAAGATGATGGAAAA+TGG - tig0019789:53308-53327 Msa1376260:CDS 40.0%
GATGGAAAATGGTCAGTCTT+TGG - tig0019789:53319-53338 Msa1376260:CDS 40.0%
ACATCAATCTTGGGTAACTC+GGG + tig0019789:53401-53420 None:intergenic 40.0%
! CACTGACTGAACATCAATCT+TGG + tig0019789:53411-53430 None:intergenic 40.0%
GTGCATCGTCAAACATCAAA+TGG - tig0019789:53428-53447 Msa1376260:CDS 40.0%
!!! GAATGGGAGCGTTCATTTTT+AGG + tig0019789:53497-53516 None:intergenic 40.0%
TGAACGAAACAAAGGATGCA+CGG - tig0019789:53567-53586 Msa1376260:exon 40.0%
! TATGCTGTGTTAGGAAGCAT+AGG - tig0019789:53647-53666 Msa1376260:five_prime_UTR 40.0%
CCGATAACATAAGCAAGAAG+GGG + tig0019789:53698-53717 None:intergenic 40.0%
CCCCTTCTTGCTTATGTTAT+CGG - tig0019789:53695-53714 Msa1376260:five_prime_UTR 40.0%
GCCGATAACATAAGCAAGAA+GGG + tig0019789:53699-53718 None:intergenic 40.0%
TGTTTGATCATTGCCTGCAT+GGG - tig0019789:53785-53804 Msa1376260:five_prime_UTR 40.0%
AGAAAATGACCGAAAGAGTC+CGG - tig0019789:53864-53883 Msa1376260:five_prime_UTR 40.0%
AAACACAGCACAACACAGCA+CGG + tig0019789:47776-47795 None:intergenic 45.0%
!! TTTGAATTCCGGTGCTGACT+AGG - tig0019789:48059-48078 Msa1376260:CDS 45.0%
TGGTTTCCAGAGGTCTATTC+GGG - tig0019789:48093-48112 Msa1376260:CDS 45.0%
ACCTCGGAAACAGGTGTTAA+CGG + tig0019789:48140-48159 None:intergenic 45.0%
AACACCTGTTTCCGAGGTTT+CGG - tig0019789:48142-48161 Msa1376260:CDS 45.0%
CACGCAAATAACCGAGAGAA+AGG + tig0019789:48290-48309 None:intergenic 45.0%
!! CCGGTTTGACTGGTTTCTTA+TGG - tig0019789:48316-48335 Msa1376260:CDS 45.0%
!! GACTGGTTTCTTATGGTGGT+TGG - tig0019789:48323-48342 Msa1376260:CDS 45.0%
TGAAACATATCCTGCTCCTG+AGG + tig0019789:48422-48441 None:intergenic 45.0%
AGCGTGAGAATCTAGAGAGA+AGG - tig0019789:48759-48778 Msa1376260:intron 45.0%
! GCAAGCATTGCAAAGCAGTT+AGG - tig0019789:48932-48951 Msa1376260:CDS 45.0%
TAGTGTTTCCTGGAGGATTG+AGG - tig0019789:48957-48976 Msa1376260:CDS 45.0%
CAATGAAACCTCAATCCTCC+AGG + tig0019789:48968-48987 None:intergenic 45.0%
CTGGAGGATTGAGGTTTCAT+TGG - tig0019789:48966-48985 Msa1376260:CDS 45.0%
GGAGGATTGAGGTTTCATTG+GGG - tig0019789:48968-48987 Msa1376260:CDS 45.0%
CAAGGACCATTGGATCAACT+AGG - tig0019789:49080-49099 Msa1376260:CDS 45.0%
ACCATTGGATCAACTAGGGT+GGG - tig0019789:49085-49104 Msa1376260:CDS 45.0%
GCACTCCTCTTACGGTATTT+AGG + tig0019789:49211-49230 None:intergenic 45.0%
CCTCACGAATTTCACAAACG+GGG - tig0019789:49251-49270 Msa1376260:intron 45.0%
TCCCACTTTGGTGGAAATCA+TGG - tig0019789:49313-49332 Msa1376260:CDS 45.0%
CTCCATGATTTCCACCAAAG+TGG + tig0019789:49318-49337 None:intergenic 45.0%
CACTTTGGTGGAAATCATGG+AGG - tig0019789:49316-49335 Msa1376260:CDS 45.0%
CTTTGGTGGAAATCATGGAG+GGG - tig0019789:49318-49337 Msa1376260:CDS 45.0%
GGGCAACCAACAAGTATGAT+AGG + tig0019789:49359-49378 None:intergenic 45.0%
!! ACAGGCTTTGTTGATGCTAG+TGG - tig0019789:49540-49559 Msa1376260:intron 45.0%
!! CAGGCTTTGTTGATGCTAGT+GGG - tig0019789:49541-49560 Msa1376260:intron 45.0%
! TAGTGGGTCTTCCATCACAT+TGG - tig0019789:49557-49576 Msa1376260:intron 45.0%
! AACCTGGTTCTTGGTTCAAC+TGG - tig0019789:49711-49730 Msa1376260:CDS 45.0%
ATCCAGTTGAACCAAGAACC+AGG + tig0019789:49716-49735 None:intergenic 45.0%
!! GTGGTGTTTTTGTTGCTGGT+TGG - tig0019789:49897-49916 Msa1376260:CDS 45.0%
GTTGGATTCTTACCGGAGAA+CGG - tig0019789:50017-50036 Msa1376260:intron 45.0%
GGTCCATTTATTGTTGCTGC+AGG - tig0019789:50375-50394 Msa1376260:intron 45.0%
CCTCCTGCAGCAACAATAAA+TGG + tig0019789:50381-50400 None:intergenic 45.0%
CCATTTATTGTTGCTGCAGG+AGG - tig0019789:50378-50397 Msa1376260:intron 45.0%
CACCATATACATGTCATGGG+TGG + tig0019789:50988-51007 None:intergenic 45.0%
! TAGCATAAATGGGAGGGTGT+AGG - tig0019789:51037-51056 Msa1376260:intron 45.0%
! AAATGGGAGGGTGTAGGATT+AGG - tig0019789:51043-51062 Msa1376260:intron 45.0%
CGCAGGCAGTTTCCTATATA+CGG - tig0019789:51359-51378 Msa1376260:CDS 45.0%
TGCAGACAAGGTCCGTATAT+AGG + tig0019789:51374-51393 None:intergenic 45.0%
! ATAAGTCTTGTCCAAGGGCT+TGG - tig0019789:51466-51485 Msa1376260:intron 45.0%
TGTGCATTACAACTCTGGGT+TGG - tig0019789:51523-51542 Msa1376260:CDS 45.0%
! CATTACAACTCTGGGTTGGA+AGG - tig0019789:51527-51546 Msa1376260:CDS 45.0%
ATACATGGAAAAGCTCACGG+CGG - tig0019789:51559-51578 Msa1376260:CDS 45.0%
GATCAAAAGACGAGGATGAC+CGG + tig0019789:51784-51803 None:intergenic 45.0%
! TCCTCGTCTTTTGATCACGA+CGG - tig0019789:51788-51807 Msa1376260:intron 45.0%
ATATTTCCTTGCACGGACAC+AGG + tig0019789:51821-51840 None:intergenic 45.0%
! AGTGCCACAGTTTTCTTAGC+AGG + tig0019789:51920-51939 None:intergenic 45.0%
GAGACAACATTGCATATGGG+AGG - tig0019789:52275-52294 Msa1376260:intron 45.0%
CTCTTCAATTTGATCCGCTG+TGG + tig0019789:52305-52324 None:intergenic 45.0%
CACAGCGGATCAAATTGAAG+AGG - tig0019789:52303-52322 Msa1376260:intron 45.0%
CTTCTGTCTTTCAGATTGGC+AGG - tig0019789:52477-52496 Msa1376260:intron 45.0%
TCGTCAAGCAGGAGAATTGA+TGG + tig0019789:52569-52588 None:intergenic 45.0%
ATCAATTCTCCTGCTTGACG+AGG - tig0019789:52568-52587 Msa1376260:intron 45.0%
GATGAATTATTGTCCCTGGG+TGG - tig0019789:52758-52777 Msa1376260:intron 45.0%
AGAGCTACTTCGATGTGAAG+AGG - tig0019789:52790-52809 Msa1376260:intron 45.0%
AGGCCACTAAACTTCCAAAG+AGG - tig0019789:52810-52829 Msa1376260:intron 45.0%
! AAGCAAAGGCAGAAGCATGA+TGG + tig0019789:52850-52869 None:intergenic 45.0%
AGAGCCGTCAATAAAAAGGC+AGG - tig0019789:53355-53374 Msa1376260:CDS 45.0%
! ATCGAGGTCAACCCTCATTT+TGG - tig0019789:53591-53610 Msa1376260:five_prime_UTR 45.0%
!! TCAACCCTCATTTTGGAGAC+TGG - tig0019789:53598-53617 Msa1376260:five_prime_UTR 45.0%
TCTGCCAGTCTCCAAAATGA+GGG + tig0019789:53605-53624 None:intergenic 45.0%
!!! CAGAGCTTAGTTTTGCTGAG+TGG - tig0019789:53621-53640 Msa1376260:five_prime_UTR 45.0%
!! GAGTGGCTTTATGCTGTGTT+AGG - tig0019789:53638-53657 Msa1376260:five_prime_UTR 45.0%
! AGCATAGGTGCTGCAATCTT+TGG - tig0019789:53662-53681 Msa1376260:five_prime_UTR 45.0%
GGCCGATAACATAAGCAAGA+AGG + tig0019789:53700-53719 None:intergenic 45.0%
TCTTGCTTATGTTATCGGCC+TGG - tig0019789:53700-53719 Msa1376260:five_prime_UTR 45.0%
GATAGTAAGTTGTCACCACC+AGG + tig0019789:53721-53740 None:intergenic 45.0%
! TTGATGACACTCATCACCTG+CGG - tig0019789:53744-53763 Msa1376260:five_prime_UTR 45.0%
GTGTTTGATCATTGCCTGCA+TGG - tig0019789:53784-53803 Msa1376260:five_prime_UTR 45.0%
CATCATTCTCCGGACTCTTT+CGG + tig0019789:53876-53895 None:intergenic 45.0%
CACCTGAGAACATCATTCTC+CGG + tig0019789:53886-53905 None:intergenic 45.0%
!!! GAATATTATTATTTTTTAAA+TGG + tig0019789:49771-49790 None:intergenic 5.0%
CACAGCACGGAGCTGAAAAA+TGG + tig0019789:47763-47782 None:intergenic 50.0%
!! ATTCCGGTGCTGACTAGGAT+CGG - tig0019789:48064-48083 Msa1376260:CDS 50.0%
CTGACTAGGATCGGAGATGA+TGG - tig0019789:48073-48092 Msa1376260:CDS 50.0%
! TCGGAGATGATGGTTTCCAG+AGG - tig0019789:48083-48102 Msa1376260:CDS 50.0%
TTTCCAGAGGTCTATTCGGG+TGG - tig0019789:48096-48115 Msa1376260:CDS 50.0%
GTTAACGGTTGCACATGTGG+TGG + tig0019789:48125-48144 None:intergenic 50.0%
GGTGTTAACGGTTGCACATG+TGG + tig0019789:48128-48147 None:intergenic 50.0%
ACCGTTAACACCTGTTTCCG+AGG - tig0019789:48136-48155 Msa1376260:CDS 50.0%
TCACCTCCGATGTCCATGAA+CGG + tig0019789:48188-48207 None:intergenic 50.0%
CAGCTGCTGTTCCTTTCTCT+CGG - tig0019789:48276-48295 Msa1376260:CDS 50.0%
! GGTTATTTGCGTGTGCTGAC+CGG - tig0019789:48297-48316 Msa1376260:CDS 50.0%
GACCATTGGATCAACTAGGG+TGG - tig0019789:49084-49103 Msa1376260:CDS 50.0%
ACCCACCCTAGTTGATCCAA+TGG + tig0019789:49089-49108 None:intergenic 50.0%
CCCCGTTTGTGAAATTCGTG+AGG + tig0019789:49254-49273 None:intergenic 50.0%
!! GCTGGTGGTGTTTTTGTTGC+TGG - tig0019789:49893-49912 Msa1376260:CDS 50.0%
CTGCTTCGGCATATGCATCT+TGG + tig0019789:50443-50462 None:intergenic 50.0%
! TTCAGCAATGCTGGCTGCTT+CGG + tig0019789:50457-50476 None:intergenic 50.0%
TGGGTGGTAAAAAGGACTGC+TGG + tig0019789:50972-50991 None:intergenic 50.0%
TAAATCCAAGGCCAAGCCCT+TGG + tig0019789:51480-51499 None:intergenic 50.0%
! ACTCTGGGTTGGAAGGTTCT+TGG - tig0019789:51534-51553 Msa1376260:CDS 50.0%
TACATGGAAAAGCTCACGGC+GGG - tig0019789:51560-51579 Msa1376260:CDS 50.0%
TCCGTCGTGATCAAAAGACG+AGG + tig0019789:51792-51811 None:intergenic 50.0%
! GTGGCACTTGTTGGCAGAAA+CGG - tig0019789:51932-51951 Msa1376260:intron 50.0%
CTTGTTGGCAGAAACGGTTC+TGG - tig0019789:51938-51957 Msa1376260:intron 50.0%
TCATAGAACCGCTCCATGAG+TGG + tig0019789:51980-51999 None:intergenic 50.0%
GAATGGCTGAGGAGCCAAAT+AGG - tig0019789:52211-52230 Msa1376260:intron 50.0%
ACTGAGCAAAGCAGGTTCCT+GGG + tig0019789:52245-52264 None:intergenic 50.0%
AACTGAGCAAAGCAGGTTCC+TGG + tig0019789:52246-52265 None:intergenic 50.0%
ATATGGGAGGGATACCACAG+CGG - tig0019789:52288-52307 Msa1376260:intron 50.0%
TCTCACTCCACTTCCCAAAC+TGG - tig0019789:52446-52465 Msa1376260:intron 50.0%
CTCACTCCACTTCCCAAACT+GGG - tig0019789:52447-52466 Msa1376260:intron 50.0%
TCACTCCACTTCCCAAACTG+GGG - tig0019789:52448-52467 Msa1376260:intron 50.0%
GGGGCTTCTGTCTTTCAGAT+TGG - tig0019789:52473-52492 Msa1376260:intron 50.0%
TGAGGCTGAAAGGTCTGTTC+AGG - tig0019789:52610-52629 Msa1376260:intron 50.0%
! GCTCTGGATCTCCTTATGCT+GGG - tig0019789:52635-52654 Msa1376260:intron 50.0%
TTGTTGAGCGTCCCAGCATA+AGG + tig0019789:52649-52668 None:intergenic 50.0%
CTCTGCATATAAGCCACCCA+GGG + tig0019789:52774-52793 None:intergenic 50.0%
GTCTTCTTGTAGTTGCGAGC+AGG + tig0019789:53122-53141 None:intergenic 50.0%
GCTGTATTTCGGCCTTCAGA+TGG - tig0019789:53242-53261 Msa1376260:CDS 50.0%
CCATCATCTTCTCAGGTGGT+GGG + tig0019789:53304-53323 None:intergenic 50.0%
TCCATCATCTTCTCAGGTGG+TGG + tig0019789:53305-53324 None:intergenic 50.0%
GAGGTGAAACAGGGGATTCT+GGG + tig0019789:53460-53479 None:intergenic 50.0%
AGAGGTGAAACAGGGGATTC+TGG + tig0019789:53461-53480 None:intergenic 50.0%
CTCTGCCAGTCTCCAAAATG+AGG + tig0019789:53606-53625 None:intergenic 50.0%
TGCTTATGTTATCGGCCTGG+TGG - tig0019789:53703-53722 Msa1376260:five_prime_UTR 50.0%
TGATGACACTCATCACCTGC+GGG - tig0019789:53745-53764 Msa1376260:five_prime_UTR 50.0%
AACTGTCACGATACCCATGC+AGG + tig0019789:53801-53820 None:intergenic 50.0%
GTCCGGAGAATGATGTTCTC+AGG - tig0019789:53881-53900 Msa1376260:five_prime_UTR 50.0%
!! CATCGTTTTGAACGCCACCG+TGG + tig0019789:47971-47990 None:intergenic 55.0%
TCTCCGATCCTAGTCAGCAC+CGG + tig0019789:48070-48089 None:intergenic 55.0%
TGACCACCCGAATAGACCTC+TGG + tig0019789:48102-48121 None:intergenic 55.0%
!! ATGAACGGTGACGGAGACTC+CGG + tig0019789:48173-48192 None:intergenic 55.0%
CCGATGTCCATGAACGGTGA+CGG + tig0019789:48182-48201 None:intergenic 55.0%
CCGTCACCGTTCATGGACAT+CGG - tig0019789:48179-48198 Msa1376260:CDS 55.0%
TCACCGTTCATGGACATCGG+AGG - tig0019789:48182-48201 Msa1376260:CDS 55.0%
GGACATCGGAGGTGAGACTT+CGG - tig0019789:48193-48212 Msa1376260:CDS 55.0%
AATGGAAGCGGAGGAGGAGA+TGG - tig0019789:48226-48245 Msa1376260:CDS 55.0%
GGAGGAGGAGATGGAAGAGA+TGG - tig0019789:48235-48254 Msa1376260:CDS 55.0%
GGAGGAGATGGAAGAGATGG+AGG - tig0019789:48238-48257 Msa1376260:CDS 55.0%
GAGAAAGGAACAGCAGCTGG+CGG + tig0019789:48275-48294 None:intergenic 55.0%
CGAGAGAAAGGAACAGCAGC+TGG + tig0019789:48278-48297 None:intergenic 55.0%
!! GGTGGTTGGTTCTATCGCTG+CGG - tig0019789:48337-48356 Msa1376260:CDS 55.0%
TATTCGCGTTCCTCAGGAGC+AGG - tig0019789:48409-48428 Msa1376260:CDS 55.0%
AGCAGCCAGCATTGCTGAAC+AGG - tig0019789:50458-50477 Msa1376260:intron 55.0%
ACATGGAAAAGCTCACGGCG+GGG - tig0019789:51561-51580 Msa1376260:CDS 55.0%
GCTGAGGAGCCAAATAGGAC+TGG - tig0019789:52216-52235 Msa1376260:intron 55.0%
CCTGGGTGACCAGTCCTATT+TGG + tig0019789:52228-52247 None:intergenic 55.0%
!! CCAAATAGGACTGGTCACCC+AGG - tig0019789:52225-52244 Msa1376260:intron 55.0%
GTCTTTCAGATTGGCAGGGC+TGG - tig0019789:52482-52501 Msa1376260:intron 55.0%
CTCCTGCTTGACGAGGTTAC+TGG - tig0019789:52575-52594 Msa1376260:intron 55.0%
CTCCAGTAACCTCGTCAAGC+AGG + tig0019789:52580-52599 None:intergenic 55.0%
CTGCTTGACGAGGTTACTGG+AGG - tig0019789:52578-52597 Msa1376260:intron 55.0%
GGCTGAAAGGTCTGTTCAGG+AGG - tig0019789:52613-52632 Msa1376260:intron 55.0%
AAGGTCTGTTCAGGAGGCTC+TGG - tig0019789:52619-52638 Msa1376260:intron 55.0%
!! GGCTCTGGATCTCCTTATGC+TGG - tig0019789:52634-52653 Msa1376260:intron 55.0%
GCTCTGCATATAAGCCACCC+AGG + tig0019789:52775-52794 None:intergenic 55.0%
CCCACCACCTGAGAAGATGA+TGG - tig0019789:53301-53320 Msa1376260:CDS 55.0%
ACAAAGGATGCACGGCATCG+AGG - tig0019789:53575-53594 Msa1376260:exon 55.0%
GATGACACTCATCACCTGCG+GGG - tig0019789:53746-53765 Msa1376260:five_prime_UTR 55.0%
ATGACACTCATCACCTGCGG+GGG - tig0019789:53747-53766 Msa1376260:five_prime_UTR 55.0%
!! CGTTTTGAACGCCACCGTGG+CGG + tig0019789:47968-47987 None:intergenic 60.0%
GGCTCCGAAACCTCGGAAAC+AGG + tig0019789:48149-48168 None:intergenic 60.0%
TTCCGAGGTTTCGGAGCCAC+CGG - tig0019789:48151-48170 Msa1376260:CDS 60.0%
GGAGTCTCCGTCACCGTTCA+TGG - tig0019789:48172-48191 Msa1376260:CDS 60.0%
GACTTCGGCGTCGCAGCAAA+TGG - tig0019789:48208-48227 Msa1376260:CDS 60.0%
GGCGTCGCAGCAAATGGAAG+CGG - tig0019789:48214-48233 Msa1376260:CDS 60.0%
GTCGCAGCAAATGGAAGCGG+AGG - tig0019789:48217-48236 Msa1376260:CDS 60.0%
GCAGCAAATGGAAGCGGAGG+AGG - tig0019789:48220-48239 Msa1376260:CDS 60.0%
AAAGGAACAGCAGCTGGCGG+CGG + tig0019789:48272-48291 None:intergenic 60.0%
!! CGTGTGCTGACCGGTTTGAC+TGG - tig0019789:48306-48325 Msa1376260:CDS 60.0%
!! GGTTGGTTCTATCGCTGCGG+CGG - tig0019789:48340-48359 Msa1376260:CDS 60.0%
CTTGTCCAAGGGCTTGGCCT+TGG - tig0019789:51472-51491 Msa1376260:intron 60.0%
AGTGCTCCTGTGTCCGTGCA+AGG - tig0019789:51812-51831 Msa1376260:intron 60.0%
TCCACTTCCCAAACTGGGGC+TGG - tig0019789:52452-52471 Msa1376260:intron 60.0%
CCACTTCCCAAACTGGGGCT+GGG - tig0019789:52453-52472 Msa1376260:intron 60.0%
CACTTCCCAAACTGGGGCTG+GGG - tig0019789:52454-52473 Msa1376260:intron 60.0%
AGAAGCCCCAGCCCCAGTTT+GGG + tig0019789:52462-52481 None:intergenic 60.0%
!! GGTGGTGGGCTCTGTACTTG+TGG + tig0019789:53290-53309 None:intergenic 60.0%
TGACACTCATCACCTGCGGG+GGG - tig0019789:53748-53767 Msa1376260:five_prime_UTR 60.0%
ACTTGTCTATCTCCCCCCGC+AGG + tig0019789:53763-53782 None:intergenic 60.0%
TGCGGGGGGAGATAGACAAG+TGG - tig0019789:53762-53781 Msa1376260:five_prime_UTR 60.0%
CTCCGGTGGCTCCGAAACCT+CGG + tig0019789:48156-48175 None:intergenic 65.0%
!! AACGGTGACGGAGACTCCGG+TGG + tig0019789:48170-48189 None:intergenic 65.0%
TCTATCGCTGCGGCGGCTCA+TGG - tig0019789:48347-48366 Msa1376260:CDS 65.0%
GACGGCTGTCTGCCGTTCTC+CGG + tig0019789:50032-50051 None:intergenic 65.0%
CCCAGCCCCAGTTTGGGAAG+TGG + tig0019789:52456-52475 None:intergenic 65.0%
CAGAAGCCCCAGCCCCAGTT+TGG + tig0019789:52463-52482 None:intergenic 65.0%
! TGGCGGCGCGTGGGTTGACT+CGG + tig0019789:47951-47970 None:intergenic 70.0%
AGTCAACCCACGCGCCGCCA+CGG - tig0019789:47951-47970 Msa1376260:CDS 70.0%
! CAACCCACGCGCCGCCACGG+TGG - tig0019789:47954-47973 Msa1376260:CDS 80.0%
! ACGCCACCGTGGCGGCGCGT+GGG + tig0019789:47960-47979 None:intergenic 80.0%
! AACGCCACCGTGGCGGCGCG+TGG + tig0019789:47961-47980 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
tig0019789 gene 47721 53952 47721 ID=Msa1376260;Name=Msa1376260
tig0019789 mRNA 47721 53952 47721 ID=Msa1376260-mRNA-1;Parent=Msa1376260;Name=Msa1376260-mRNA-1;_AED=0.23;_eAED=0.23;_QI=368|1|0.88|1|0.87|1|9|0|922
tig0019789 exon 47721 48558 47721 ID=Msa1376260-mRNA-1:exon:5076;Parent=Msa1376260-mRNA-1
tig0019789 exon 48842 49182 48842 ID=Msa1376260-mRNA-1:exon:5075;Parent=Msa1376260-mRNA-1
tig0019789 exon 49286 49506 49286 ID=Msa1376260-mRNA-1:exon:5074;Parent=Msa1376260-mRNA-1
tig0019789 exon 49663 49973 49663 ID=Msa1376260-mRNA-1:exon:5073;Parent=Msa1376260-mRNA-1
tig0019789 exon 50050 50309 50050 ID=Msa1376260-mRNA-1:exon:5072;Parent=Msa1376260-mRNA-1
tig0019789 exon 51194 51394 51194 ID=Msa1376260-mRNA-1:exon:5071;Parent=Msa1376260-mRNA-1
tig0019789 exon 51490 51665 51490 ID=Msa1376260-mRNA-1:exon:5070;Parent=Msa1376260-mRNA-1
tig0019789 exon 51750 51804 51750 ID=Msa1376260-mRNA-1:exon:5069;Parent=Msa1376260-mRNA-1
tig0019789 exon 53219 53952 53219 ID=Msa1376260-mRNA-1:exon:5068;Parent=Msa1376260-mRNA-1
tig0019789 five_prime_UTR 53585 53952 53585 ID=Msa1376260-mRNA-1:five_prime_utr;Parent=Msa1376260-mRNA-1
tig0019789 CDS 53219 53584 53219 ID=Msa1376260-mRNA-1:cds;Parent=Msa1376260-mRNA-1
tig0019789 CDS 51750 51804 51750 ID=Msa1376260-mRNA-1:cds;Parent=Msa1376260-mRNA-1
tig0019789 CDS 51490 51665 51490 ID=Msa1376260-mRNA-1:cds;Parent=Msa1376260-mRNA-1
tig0019789 CDS 51194 51394 51194 ID=Msa1376260-mRNA-1:cds;Parent=Msa1376260-mRNA-1
tig0019789 CDS 50050 50309 50050 ID=Msa1376260-mRNA-1:cds;Parent=Msa1376260-mRNA-1
tig0019789 CDS 49663 49973 49663 ID=Msa1376260-mRNA-1:cds;Parent=Msa1376260-mRNA-1
tig0019789 CDS 49286 49506 49286 ID=Msa1376260-mRNA-1:cds;Parent=Msa1376260-mRNA-1
tig0019789 CDS 48842 49182 48842 ID=Msa1376260-mRNA-1:cds;Parent=Msa1376260-mRNA-1
tig0019789 CDS 47721 48558 47721 ID=Msa1376260-mRNA-1:cds;Parent=Msa1376260-mRNA-1
Gene Sequence

>Msa1376260

ATGATGGTTTCCAGAGGTCTATTCGGGTGGTCACCACCACATGTGCAACCGTTAACACCTGTTTCCGAGGTTTCGGAGCCACCGGAGTCTCCGTCACCGTTCATGGACATCGGAGGTGAGACTTCGGCGTCGCAGCAAATGGAAGCGGAGGAGGAGATGGAAGAGATGGAGGATATTGAACCGCCGCCAGCTGCTGTTCCTTTCTCTCGGTTATTTGCGTGTGCTGACCGGTTTGACTGGTTTCTTATGGTGGTTGGTTCTATCGCTGCGGCGGCTCATGGAACTGCGCTTGTTGTTTACTTGCATTACTTTGCTAAAGTTATTCGCGTTCCTCAGGAGCAGGATATGTTTCATAGGTTCAAGGAGCTTGCTTTGACCATTGTTTATATCGCTGGTGGTGTTTTTGTTGCTGGTTGGATTGAGGTTTCATGTTGGATTCTTACCGGAGAACGGCAGACAGCCGTCATCAGATCAAAATATGTTCGAGTATTACTTAACCAAGATATGAGTTTCTTTGATACTTATGGAAATAACGGAGACATTGTGAGTCAAGTATTGAGTGATGTACTGCTCATTCAGTCTGCTCTCAGTGAAAAAGTTGGGAATTATATTCATAATATGGCTACATTCTTCAGTGGTCTTGTTATTGCTTTTATCAATTGTTGGCAGATAGCATTGATAACATTGGCTACAGGTCCATTTATTGTTGCTGCAGGAGGAATATCAAATATATTCCTTCATAGGCTTGCAGAGAATATCCAAGATGCATATGCCGAAGCAGCCAGCATTGCTGAACAGGCAGTTTCCTATATACGGACCTTGTCTGCATTTACAAATGAAACATTGGCGAAATATTCATATGCAACGTCACTGCAAGCTACTCTTAGATATGGTATATTAATAAGTCTTGTCCAAGGGCTTGGCCTTGGATTTACATATGGGCTTGCAATATGTTCTTGTGCATTACAACTCTGGGTTGGAAGGTTCTTGGTTATACATGGAAAAGCTCACGGCGGGGAAATTATAACAGCTCTGTTTGCTGTCATTCTAAGTGGCTTGGGATTAAACCAAGCGGCGACAAATTTCTACTCATTTGATCAAGGGCGAATAGCTGCCTATAGACTATTCGAGATGATAAGCCGGTCATCCTCGTCTTTTGATCACGACGGAAGTGCTCCTGTGTCCGTGCAAGGAAATATAGAGTTTCGGAATGTTTACTTCAGTTATCTTTCACGCCCTGAAATCCCTATCTTAAGTGGGTTTTATCTCACAGTTCCTGCTAAGAAAACTGTGGCACTTGTTGGCAGAAACGGTTCTGGAAAAAGTAGTATTATTCCACTCATGGAGCGGTTCTATGATCCAACATTAGGAGAAGTTCTTTTAGATGGTGAAAACATCAAGAATTTGAAACTGGAATGGCTGAGGAGCCAAATAGGACTGGTCACCCAGGAACCTGCTTTGCTCAGTTTGAGTATAAGAGACAACATTGCATATGGGAGGGATACCACAGCGGATCAAATTGAAGAGGCTGCTAAAATAGCTCACGCACATACCTTTATCAGTTCATTAGATAAAGGTTATGATACACAGATTGGCAGGGCTGGTTTAGCTTTGACAGAAGAACAGAAAATAAAGCTTTCTATTGCAAGAGCTGTGCTTCTAAATCCATCAATTCTCCTGCTTGACGAGGTTACTGGAGGACTTGATTTTGAGGCTGAAAGGTCTGTTCAGGAGGCTCTGGATCTCCTTATGCTGGGACGCTCAACAATAATAATTGCTCGAAGGCTTAGTCTTATAAAGAATGCCGATTATATAGCAGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACTCACGATGAATTATTGTCCCTGGGTGGCTTATATGCAGAGCTACTTCGATGTGAAGAGGCCACTAAACTTCCAAAGAGGATGCCTGCTCGCAACTACAAGAAGACTGCAGCTTTCCAAATTGAGAAAGATTCTTCAGAGAGTCATAGCTGCAAAGAACCATCATCCCCTAGAATGATGAAGTCACCTTCTCTTCAAAGAGTTTCTGCTGTATTTCGGCCTTCAGATGGCTTCTTTAACTTACATGAATCACCACAAGTACAGAGCCCACCACCTGAGAAGATGATGGAAAATGGTCAGTCTTTGGATTCAACCGAGAAAGAGCCGTCAATAAAAAGGCAGGATAGCTTTGAAATGAGACTACCCGAGTTACCCAAGATTGATGTTCAGTCAGTGCATCGTCAAACATCAAATGGTTCTGACCCAGAATCCCCTGTTTCACCTCTTTTAACATCTGATCCTAAAAATGAACGCTCCCATTCACAAACATTTAGCAGACCAGATAGTTATTCTGATGAATTTTCAGTGAAAATGAACGAAACAAAGGATGCACGGCATCGAGGTCAACCCTCATTTTGGAGACTGGCAGAGCTTAGTTTTGCTGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGTGCTGCAATCTTTGGTGCGTTCAATCCCCTTCTTGCTTATGTTATCGGCCTGGTGGTGACAACTTACTATCGAATTGATGACACTCATCACCTGCGGGGGGAGATAGACAAGTGGTGTTTGATCATTGCCTGCATGGGTATCGTGACAGTTGTTGCCAACTTTTTACAGCATTTCTACTTTGGTATAATGGGGGAGAAAATGACCGAAAGAGTCCGGAGAATGATGTTCTCAGGTGTGCATGTTTGTTTTTTAGAATCTTCAGTAACCACCCTGATATATTAA
Protein sequence

>Msa1376260

MMVSRGLFGWSPPHVQPLTPVSEVSEPPESPSPFMDIGGETSASQQMEAEEEMEEMEDIEPPPAAVPFSRLFACADRFDWFLMVVGSIAAAAHGTALVVYLHYFAKVIRVPQEQDMFHRFKELALTIVYIAGGVFVAGWIEVSCWILTGERQTAVIRSKYVRVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIAFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLSAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVIHGKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSFDHDGSAPVSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDTTADQIEEAAKIAHAHTFISSLDKGYDTQIGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLSLIKNADYIAVMEEGQLVEMGTHDELLSLGGLYAELLRCEEATKLPKRMPARNYKKTAAFQIEKDSSESHSCKEPSSPRMMKSPSLQRVSAVFRPSDGFFNLHESPQVQSPPPEKMMENGQSLDSTEKEPSIKRQDSFEMRLPELPKIDVQSVHRQTSNGSDPESPVSPLLTSDPKNERSHSQTFSRPDSYSDEFSVKMNETKDARHRGQPSFWRLAELSFAEWLYAVLGSIGAAIFGAFNPLLAYVIGLVVTTYYRIDDTHHLRGEIDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSGVHVCFLESSVTTLIY*