AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1166690

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1166690 MtrunA17_Chr7g0267811 94.944 178 4 1 1 173 271 448 5.23e-119 343
Msa1166690 MtrunA17_Chr4g0025311 76.571 175 36 1 1 170 285 459 1.06e-90 272
Msa1166690 MtrunA17_Chr2g0322251 73.864 176 37 3 1 168 262 436 3.45e-83 252
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1166690 AT3G52370.1 76.404 178 29 3 1 172 265 435 5.00e-91 272
Msa1166690 AT3G52370.2 76.404 178 29 3 1 172 318 488 6.34e-91 273
Msa1166690 AT2G35860.1 76.836 177 31 2 1 172 273 444 7.59e-90 269
Msa1166690 AT5G06390.1 76.000 175 29 3 1 170 284 450 6.40e-89 267
Msa1166690 AT3G11700.1 75.429 175 32 2 1 170 287 455 3.37e-83 253
Msa1166690 AT5G05650.1 58.511 94 30 2 41 129 2 91 4.65e-30 107

Find 50 sgRNAs with CRISPR-Local

Find 352 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTAGCATGGTTGGATCTTT+TGG 0.243312 7_4:+58781340 Msa1166690:CDS
CAATGAAATGGCGGATATTC+TGG 0.243548 7_4:+58779474 None:intergenic
TATAACGCCGTTAGAAGATT+TGG 0.248988 7_4:+58779682 Msa1166690:CDS
TCTGACGGTTCTGTCAAATT+TGG 0.285494 7_4:+58779757 Msa1166690:CDS
AGGATATGTTCTAACAGTTT+TGG 0.293643 7_4:+58779543 Msa1166690:CDS
TTCGCCATTGCTTCATCATT+TGG 0.302310 7_4:-58779568 None:intergenic
GCGATTGAGTTGCAAGATTT+CGG 0.337934 7_4:+58781592 Msa1166690:three_prime_UTR
CTACCGTCGGTGTAAATATC+AGG 0.354622 7_4:-58779811 None:intergenic
GAGGAGAGTGTCGTATTTGA+AGG 0.356459 7_4:-58781742 None:intergenic
AACGTCGTTAGCAACGGAAA+TGG 0.374579 7_4:+58779504 Msa1166690:CDS
GCCTCATAAAGTTGTTGCTC+AGG 0.394027 7_4:+58779732 Msa1166690:intron
ATAACGCCGTTAGAAGATTT+GGG 0.405597 7_4:+58779683 Msa1166690:CDS
TGATAGTATATAATTTGTTC+CGG 0.408846 7_4:-58779625 None:intergenic
TTTCCGTTGCTAACGACGTT+AGG 0.410525 7_4:-58779501 None:intergenic
ACGTCGTTAGCAACGGAAAT+GGG 0.422550 7_4:+58779505 Msa1166690:CDS
TCATCTTCATTCTCTTCCTC+CGG 0.431860 7_4:-58779871 None:intergenic
CTCTCCTCCGTTTGATACTC+GGG 0.454279 7_4:-58779655 None:intergenic
GAACTTGCTTGTAGCATGGT+TGG 0.454599 7_4:+58781331 Msa1166690:CDS
TCAAATGTCCATATCATAGT+TGG 0.455515 7_4:-58781868 None:intergenic
ATTAACGACTGATCAATTAT+CGG 0.461860 7_4:+58779591 Msa1166690:CDS
GACGGTAGAATTTCCGTTCA+AGG 0.464023 7_4:+58779826 Msa1166690:CDS
ACTCTCCTCCGTTTGATACT+CGG 0.469204 7_4:-58779656 None:intergenic
GCATGTGGCAGGGAAATTGC+TGG 0.473108 7_4:+58781309 Msa1166690:intron
AAGAATTCAATACCTCTCCT+TGG 0.486760 7_4:-58779949 None:intergenic
GAAAATGAGTTGGAACTTGA+AGG 0.493233 7_4:-58781822 None:intergenic
ATTTCCGTTCAAGGTATTGA+CGG 0.497370 7_4:+58779835 Msa1166690:CDS
ATTTGCCGACGAAAATGAGT+TGG 0.500205 7_4:-58781832 None:intergenic
ATAATTTGTTCCGGTGCACC+TGG 0.520254 7_4:-58779616 None:intergenic
AGTTATATAAACTTGATGAA+TGG 0.530462 7_4:+58781442 Msa1166690:three_prime_UTR
ATGGGTCGTTTAGTTTCTGA+AGG 0.541305 7_4:+58779523 Msa1166690:CDS
TTAGAAGCAACTTTAACAAG+TGG 0.547256 7_4:-58779925 None:intergenic
TTGAGTTGCAAGATTTCGGT+GGG 0.555248 7_4:+58781596 Msa1166690:three_prime_UTR
GGCTCCAAATGATGAAGCAA+TGG 0.555279 7_4:+58779564 Msa1166690:CDS
TTAAAGTTGCTTCTAAACCA+AGG 0.557248 7_4:+58779932 Msa1166690:CDS
TATAATTCCCGAGTATCAAA+CGG 0.563846 7_4:+58779648 Msa1166690:CDS
TCTTCATTCTCTTCCTCCGG+TGG 0.568260 7_4:-58779868 None:intergenic
ATTATCGGAACCAGGTGCAC+CGG 0.569501 7_4:+58779606 Msa1166690:CDS
TAACCTAACGTCGTTAGCAA+CGG 0.578368 7_4:+58779498 Msa1166690:CDS
GCTGGAACTTGCTTGTAGCA+TGG 0.583073 7_4:+58781327 Msa1166690:CDS
ATTGAGTTGCAAGATTTCGG+TGG 0.589972 7_4:+58781595 Msa1166690:three_prime_UTR
AATACGACACTCTCCTCTCT+CGG 0.595722 7_4:+58781748 Msa1166690:three_prime_UTR
AACACCGTCAATACCTTGAA+CGG 0.599863 7_4:-58779839 None:intergenic
GTTGTTGCTCAGGAATCTGA+CGG 0.606043 7_4:+58779742 Msa1166690:intron
GGTTCTGTCAAATTTGGTCA+CGG 0.607360 7_4:+58779763 Msa1166690:CDS
ACTGATCAATTATCGGAACC+AGG 0.656433 7_4:+58779598 Msa1166690:CDS
GTTGCTTCTAAACCAAGGAG+AGG 0.661362 7_4:+58779937 Msa1166690:CDS
GATCCTGATATTTACACCGA+CGG 0.666955 7_4:+58779808 Msa1166690:CDS
TGAGTTGCAAGATTTCGGTG+GGG 0.674970 7_4:+58781597 Msa1166690:three_prime_UTR
TTGAACGGAAATTCTACCGT+CGG 0.682101 7_4:-58779824 None:intergenic
AATTCCCGAGTATCAAACGG+AGG 0.728958 7_4:+58779651 Msa1166690:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GATATGAAAAATAAAATAAT+GGG - chr7_4:58781092-58781111 None:intergenic 10.0%
!! TGATATGAAAAATAAAATAA+TGG - chr7_4:58781093-58781112 None:intergenic 10.0%
!! GATATGAAAAATAAAATAAT+GGG - chr7_4:58781092-58781111 None:intergenic 10.0%
!! TGATATGAAAAATAAAATAA+TGG - chr7_4:58781093-58781112 None:intergenic 10.0%
!!! GGCTAATTATATTTAATTTT+GGG + chr7_4:58780602-58780621 Msa1166690:intron 15.0%
!!! TAATTATATTTAATTTTGGG+TGG + chr7_4:58780605-58780624 Msa1166690:intron 15.0%
!!! AATTATATTTAATTTTGGGT+GGG + chr7_4:58780606-58780625 Msa1166690:intron 15.0%
!! AAAACATGTTAAATAATCAA+GGG - chr7_4:58781210-58781229 None:intergenic 15.0%
!! AAAAACATGTTAAATAATCA+AGG - chr7_4:58781211-58781230 None:intergenic 15.0%
!! TATGGAATAATATTATTAGT+GGG - chr7_4:58781476-58781495 None:intergenic 15.0%
!! TTATGGAATAATATTATTAG+TGG - chr7_4:58781477-58781496 None:intergenic 15.0%
!!! AAATCATTTTCAATACAAAA+AGG + chr7_4:58781567-58781586 Msa1166690:three_prime_UTR 15.0%
!!! AATCATTTTCAATACAAAAA+GGG + chr7_4:58781568-58781587 Msa1166690:three_prime_UTR 15.0%
!!! GGCTAATTATATTTAATTTT+GGG + chr7_4:58780602-58780621 Msa1166690:intron 15.0%
!!! TAATTATATTTAATTTTGGG+TGG + chr7_4:58780605-58780624 Msa1166690:intron 15.0%
!!! AATTATATTTAATTTTGGGT+GGG + chr7_4:58780606-58780625 Msa1166690:intron 15.0%
!! AAAACATGTTAAATAATCAA+GGG - chr7_4:58781210-58781229 None:intergenic 15.0%
!! AAAAACATGTTAAATAATCA+AGG - chr7_4:58781211-58781230 None:intergenic 15.0%
!! TATGGAATAATATTATTAGT+GGG - chr7_4:58781476-58781495 None:intergenic 15.0%
!! TTATGGAATAATATTATTAG+TGG - chr7_4:58781477-58781496 None:intergenic 15.0%
!!! AAATCATTTTCAATACAAAA+AGG + chr7_4:58781567-58781586 Msa1166690:three_prime_UTR 15.0%
!!! AATCATTTTCAATACAAAAA+GGG + chr7_4:58781568-58781587 Msa1166690:three_prime_UTR 15.0%
!!! TGATAGTATATAATTTGTTC+CGG - chr7_4:58779628-58779647 None:intergenic 20.0%
!!! TAACCTCATCTTTTTTTTTT+TGG - chr7_4:58780067-58780086 None:intergenic 20.0%
!! AAAAAAAAAAGATGAGGTTA+AGG + chr7_4:58780067-58780086 Msa1166690:intron 20.0%
!! GTTGGAAATATATAGAAAAA+TGG - chr7_4:58780410-58780429 None:intergenic 20.0%
!! AGCAATAATAACTCATTATT+AGG - chr7_4:58780478-58780497 None:intergenic 20.0%
!!! TTGATTTTTCTTTCTTTCTA+TGG + chr7_4:58780559-58780578 Msa1166690:intron 20.0%
!!! TGATTTTTCTTTCTTTCTAT+GGG + chr7_4:58780560-58780579 Msa1166690:intron 20.0%
!!! GGGCTAATTATATTTAATTT+TGG + chr7_4:58780601-58780620 Msa1166690:intron 20.0%
!! AGTTATATAAACTTGATGAA+TGG + chr7_4:58781442-58781461 Msa1166690:three_prime_UTR 20.0%
!! TGAAATAATAAACCAAACAA+TGG - chr7_4:58781500-58781519 None:intergenic 20.0%
!!! TTTTAAAACCAACTATGATA+TGG + chr7_4:58781860-58781879 Msa1166690:three_prime_UTR 20.0%
!!! TGATAGTATATAATTTGTTC+CGG - chr7_4:58779628-58779647 None:intergenic 20.0%
!!! TAACCTCATCTTTTTTTTTT+TGG - chr7_4:58780067-58780086 None:intergenic 20.0%
!! AAAAAAAAAAGATGAGGTTA+AGG + chr7_4:58780067-58780086 Msa1166690:intron 20.0%
!! GTTGGAAATATATAGAAAAA+TGG - chr7_4:58780410-58780429 None:intergenic 20.0%
!! AGCAATAATAACTCATTATT+AGG - chr7_4:58780478-58780497 None:intergenic 20.0%
!!! TTGATTTTTCTTTCTTTCTA+TGG + chr7_4:58780559-58780578 Msa1166690:intron 20.0%
!!! TGATTTTTCTTTCTTTCTAT+GGG + chr7_4:58780560-58780579 Msa1166690:intron 20.0%
!!! GGGCTAATTATATTTAATTT+TGG + chr7_4:58780601-58780620 Msa1166690:intron 20.0%
!! AGTTATATAAACTTGATGAA+TGG + chr7_4:58781442-58781461 Msa1166690:three_prime_UTR 20.0%
!! TGAAATAATAAACCAAACAA+TGG - chr7_4:58781500-58781519 None:intergenic 20.0%
!!! TTTTAAAACCAACTATGATA+TGG + chr7_4:58781860-58781879 Msa1166690:three_prime_UTR 20.0%
! ATTAACGACTGATCAATTAT+CGG + chr7_4:58779591-58779610 Msa1166690:CDS 25.0%
!! AATTTTCCCAAATCTTCTAA+CGG - chr7_4:58779692-58779711 None:intergenic 25.0%
! CTTTATCATAGAAATAGATG+AGG + chr7_4:58780030-58780049 Msa1166690:intron 25.0%
! GTACCAAAAAAAAAAAGATG+AGG + chr7_4:58780061-58780080 Msa1166690:intron 25.0%
! AATAAAAAATCTCCCTCATT+TGG + chr7_4:58780208-58780227 Msa1166690:intron 25.0%
! ATAAAAAATCTCCCTCATTT+GGG + chr7_4:58780209-58780228 Msa1166690:intron 25.0%
! GAACTCAAAAATTGTATTGA+GGG + chr7_4:58780233-58780252 Msa1166690:intron 25.0%
!! TTGATTAACCTTTTACAAAG+TGG + chr7_4:58780498-58780517 Msa1166690:intron 25.0%
!! TGATTAACCTTTTACAAAGT+GGG + chr7_4:58780499-58780518 Msa1166690:intron 25.0%
! AAAAAAACCCACTTTGTAAA+AGG - chr7_4:58780509-58780528 None:intergenic 25.0%
!!! GGTTTTTTTATTAGTATGTG+TGG + chr7_4:58780520-58780539 Msa1166690:intron 25.0%
! AAAGAGCAATTAGATTAAAG+TGG - chr7_4:58780768-58780787 None:intergenic 25.0%
! ATTAATCACATGTACTAGTT+TGG - chr7_4:58780937-58780956 None:intergenic 25.0%
!! GCATTTAGGTTAAATGAAAA+TGG - chr7_4:58781291-58781310 None:intergenic 25.0%
! ATTATTCCATAACCATTGTT+TGG + chr7_4:58781485-58781504 Msa1166690:intron 25.0%
! AATAAACCAAACAATGGTTA+TGG - chr7_4:58781494-58781513 None:intergenic 25.0%
!!! TTTTGATTCACATACAAACA+GGG - chr7_4:58781789-58781808 None:intergenic 25.0%
!!! TTTTTGATTCACATACAAAC+AGG - chr7_4:58781790-58781809 None:intergenic 25.0%
! ATTAACGACTGATCAATTAT+CGG + chr7_4:58779591-58779610 Msa1166690:CDS 25.0%
!! AATTTTCCCAAATCTTCTAA+CGG - chr7_4:58779692-58779711 None:intergenic 25.0%
! CTTTATCATAGAAATAGATG+AGG + chr7_4:58780030-58780049 Msa1166690:intron 25.0%
! GTACCAAAAAAAAAAAGATG+AGG + chr7_4:58780061-58780080 Msa1166690:intron 25.0%
! AATAAAAAATCTCCCTCATT+TGG + chr7_4:58780208-58780227 Msa1166690:intron 25.0%
! ATAAAAAATCTCCCTCATTT+GGG + chr7_4:58780209-58780228 Msa1166690:intron 25.0%
! GAACTCAAAAATTGTATTGA+GGG + chr7_4:58780233-58780252 Msa1166690:intron 25.0%
!! TTGATTAACCTTTTACAAAG+TGG + chr7_4:58780498-58780517 Msa1166690:intron 25.0%
!! TGATTAACCTTTTACAAAGT+GGG + chr7_4:58780499-58780518 Msa1166690:intron 25.0%
! AAAAAAACCCACTTTGTAAA+AGG - chr7_4:58780509-58780528 None:intergenic 25.0%
!!! GGTTTTTTTATTAGTATGTG+TGG + chr7_4:58780520-58780539 Msa1166690:intron 25.0%
! AAAGAGCAATTAGATTAAAG+TGG - chr7_4:58780768-58780787 None:intergenic 25.0%
! ATTAATCACATGTACTAGTT+TGG - chr7_4:58780937-58780956 None:intergenic 25.0%
!! GCATTTAGGTTAAATGAAAA+TGG - chr7_4:58781291-58781310 None:intergenic 25.0%
! ATTATTCCATAACCATTGTT+TGG + chr7_4:58781485-58781504 Msa1166690:intron 25.0%
! AATAAACCAAACAATGGTTA+TGG - chr7_4:58781494-58781513 None:intergenic 25.0%
!!! TTTTGATTCACATACAAACA+GGG - chr7_4:58781789-58781808 None:intergenic 25.0%
!!! TTTTTGATTCACATACAAAC+AGG - chr7_4:58781790-58781809 None:intergenic 25.0%
! AGGATATGTTCTAACAGTTT+TGG + chr7_4:58779543-58779562 Msa1166690:CDS 30.0%
TATAATTCCCGAGTATCAAA+CGG + chr7_4:58779648-58779667 Msa1166690:CDS 30.0%
TTAGAAGCAACTTTAACAAG+TGG - chr7_4:58779928-58779947 None:intergenic 30.0%
TTAAAGTTGCTTCTAAACCA+AGG + chr7_4:58779932-58779951 Msa1166690:CDS 30.0%
TGGAAGAAATAGAAGACATT+GGG + chr7_4:58780151-58780170 Msa1166690:intron 30.0%
TAAAAAATCTCCCTCATTTG+GGG + chr7_4:58780210-58780229 Msa1166690:intron 30.0%
GGAACTCAAAAATTGTATTG+AGG + chr7_4:58780232-58780251 Msa1166690:intron 30.0%
TCAAAAATTGTATTGAGGGA+GGG + chr7_4:58780237-58780256 Msa1166690:intron 30.0%
!! CTCATTATTAGGCTTTGTTT+GGG - chr7_4:58780467-58780486 None:intergenic 30.0%
!! ACTCATTATTAGGCTTTGTT+TGG - chr7_4:58780468-58780487 None:intergenic 30.0%
ATTAGCCCAAACAAGAATAA+AGG - chr7_4:58780589-58780608 None:intergenic 30.0%
CAACAAATTCAACTAGAGAT+TGG - chr7_4:58780740-58780759 None:intergenic 30.0%
AAAGAACAAACCCTAGTATT+TGG - chr7_4:58780825-58780844 None:intergenic 30.0%
TCATTTAACCTAAATGCATG+TGG + chr7_4:58781294-58781313 Msa1166690:intron 30.0%
TCAAATGTCCATATCATAGT+TGG - chr7_4:58781871-58781890 None:intergenic 30.0%
! AGGATATGTTCTAACAGTTT+TGG + chr7_4:58779543-58779562 Msa1166690:CDS 30.0%
TATAATTCCCGAGTATCAAA+CGG + chr7_4:58779648-58779667 Msa1166690:CDS 30.0%
TTAGAAGCAACTTTAACAAG+TGG - chr7_4:58779928-58779947 None:intergenic 30.0%
TTAAAGTTGCTTCTAAACCA+AGG + chr7_4:58779932-58779951 Msa1166690:CDS 30.0%
TGGAAGAAATAGAAGACATT+GGG + chr7_4:58780151-58780170 Msa1166690:intron 30.0%
TAAAAAATCTCCCTCATTTG+GGG + chr7_4:58780210-58780229 Msa1166690:intron 30.0%
GGAACTCAAAAATTGTATTG+AGG + chr7_4:58780232-58780251 Msa1166690:intron 30.0%
TCAAAAATTGTATTGAGGGA+GGG + chr7_4:58780237-58780256 Msa1166690:intron 30.0%
!! CTCATTATTAGGCTTTGTTT+GGG - chr7_4:58780467-58780486 None:intergenic 30.0%
!! ACTCATTATTAGGCTTTGTT+TGG - chr7_4:58780468-58780487 None:intergenic 30.0%
ATTAGCCCAAACAAGAATAA+AGG - chr7_4:58780589-58780608 None:intergenic 30.0%
CAACAAATTCAACTAGAGAT+TGG - chr7_4:58780740-58780759 None:intergenic 30.0%
AAAGAACAAACCCTAGTATT+TGG - chr7_4:58780825-58780844 None:intergenic 30.0%
TCATTTAACCTAAATGCATG+TGG + chr7_4:58781294-58781313 Msa1166690:intron 30.0%
TCAAATGTCCATATCATAGT+TGG - chr7_4:58781871-58781890 None:intergenic 30.0%
TATAACGCCGTTAGAAGATT+TGG + chr7_4:58779682-58779701 Msa1166690:CDS 35.0%
ATAACGCCGTTAGAAGATTT+GGG + chr7_4:58779683-58779702 Msa1166690:CDS 35.0%
!! ATTTCCGTTCAAGGTATTGA+CGG + chr7_4:58779835-58779854 Msa1166690:CDS 35.0%
! TAACAAGTGGAGTTTTTGCA+CGG - chr7_4:58779915-58779934 None:intergenic 35.0%
AAGAATTCAATACCTCTCCT+TGG - chr7_4:58779952-58779971 None:intergenic 35.0%
!! ATGAGGTTAAGGCTTTGTTT+GGG + chr7_4:58780078-58780097 Msa1166690:intron 35.0%
! GAGGATTTTGCAAAAAAGGA+AGG + chr7_4:58780122-58780141 Msa1166690:intron 35.0%
GTGGAAGAAATAGAAGACAT+TGG + chr7_4:58780150-58780169 Msa1166690:intron 35.0%
AAGAAATAGAAGACATTGGG+AGG + chr7_4:58780154-58780173 Msa1166690:intron 35.0%
AAAAAATCTCCCTCATTTGG+GGG + chr7_4:58780211-58780230 Msa1166690:intron 35.0%
CTCAAAAATTGTATTGAGGG+AGG + chr7_4:58780236-58780255 Msa1166690:intron 35.0%
! GGTTGCCTTTATTCTTGTTT+GGG + chr7_4:58780581-58780600 Msa1166690:intron 35.0%
TTTGAGCTTTGCCAAATACT+AGG + chr7_4:58780811-58780830 Msa1166690:intron 35.0%
TTGAGCTTTGCCAAATACTA+GGG + chr7_4:58780812-58780831 Msa1166690:intron 35.0%
! TGGTTAGTCAACTAATACCA+CGG - chr7_4:58781271-58781290 None:intergenic 35.0%
AAAAATAATGCAACCGAGAG+AGG - chr7_4:58781764-58781783 None:intergenic 35.0%
! GAAAATGAGTTGGAACTTGA+AGG - chr7_4:58781825-58781844 None:intergenic 35.0%
! AAGTTCCAACTCATTTTCGT+CGG + chr7_4:58781827-58781846 Msa1166690:three_prime_UTR 35.0%
TATAACGCCGTTAGAAGATT+TGG + chr7_4:58779682-58779701 Msa1166690:CDS 35.0%
ATAACGCCGTTAGAAGATTT+GGG + chr7_4:58779683-58779702 Msa1166690:CDS 35.0%
!! ATTTCCGTTCAAGGTATTGA+CGG + chr7_4:58779835-58779854 Msa1166690:CDS 35.0%
! TAACAAGTGGAGTTTTTGCA+CGG - chr7_4:58779915-58779934 None:intergenic 35.0%
AAGAATTCAATACCTCTCCT+TGG - chr7_4:58779952-58779971 None:intergenic 35.0%
!! ATGAGGTTAAGGCTTTGTTT+GGG + chr7_4:58780078-58780097 Msa1166690:intron 35.0%
! GAGGATTTTGCAAAAAAGGA+AGG + chr7_4:58780122-58780141 Msa1166690:intron 35.0%
GTGGAAGAAATAGAAGACAT+TGG + chr7_4:58780150-58780169 Msa1166690:intron 35.0%
AAGAAATAGAAGACATTGGG+AGG + chr7_4:58780154-58780173 Msa1166690:intron 35.0%
AAAAAATCTCCCTCATTTGG+GGG + chr7_4:58780211-58780230 Msa1166690:intron 35.0%
CTCAAAAATTGTATTGAGGG+AGG + chr7_4:58780236-58780255 Msa1166690:intron 35.0%
! GGTTGCCTTTATTCTTGTTT+GGG + chr7_4:58780581-58780600 Msa1166690:intron 35.0%
TTTGAGCTTTGCCAAATACT+AGG + chr7_4:58780811-58780830 Msa1166690:intron 35.0%
TTGAGCTTTGCCAAATACTA+GGG + chr7_4:58780812-58780831 Msa1166690:intron 35.0%
! TGGTTAGTCAACTAATACCA+CGG - chr7_4:58781271-58781290 None:intergenic 35.0%
AAAAATAATGCAACCGAGAG+AGG - chr7_4:58781764-58781783 None:intergenic 35.0%
! GAAAATGAGTTGGAACTTGA+AGG - chr7_4:58781825-58781844 None:intergenic 35.0%
! AAGTTCCAACTCATTTTCGT+CGG + chr7_4:58781827-58781846 Msa1166690:three_prime_UTR 35.0%
TAACCTAACGTCGTTAGCAA+CGG + chr7_4:58779498-58779517 Msa1166690:CDS 40.0%
! ATGGGTCGTTTAGTTTCTGA+AGG + chr7_4:58779523-58779542 Msa1166690:CDS 40.0%
TTCGCCATTGCTTCATCATT+TGG - chr7_4:58779571-58779590 None:intergenic 40.0%
ACTGATCAATTATCGGAACC+AGG + chr7_4:58779598-58779617 Msa1166690:CDS 40.0%
TCCTGAGCAACAACTTTATG+AGG - chr7_4:58779736-58779755 None:intergenic 40.0%
TCTGACGGTTCTGTCAAATT+TGG + chr7_4:58779757-58779776 Msa1166690:CDS 40.0%
GGTTCTGTCAAATTTGGTCA+CGG + chr7_4:58779763-58779782 Msa1166690:CDS 40.0%
GATCCTGATATTTACACCGA+CGG + chr7_4:58779808-58779827 Msa1166690:CDS 40.0%
TTGAACGGAAATTCTACCGT+CGG - chr7_4:58779827-58779846 None:intergenic 40.0%
AACACCGTCAATACCTTGAA+CGG - chr7_4:58779842-58779861 None:intergenic 40.0%
TCATCTTCATTCTCTTCCTC+CGG - chr7_4:58779874-58779893 None:intergenic 40.0%
!! GATGAGGTTAAGGCTTTGTT+TGG + chr7_4:58780077-58780096 Msa1166690:intron 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG + chr7_4:58780085-58780104 Msa1166690:intron 40.0%
! AGGGGAGGATTTTGCAAAAA+AGG + chr7_4:58780118-58780137 Msa1166690:intron 40.0%
!!! TTTTGAGTTCCCCCAAATGA+GGG - chr7_4:58780223-58780242 None:intergenic 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG - chr7_4:58780224-58780243 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG - chr7_4:58780460-58780479 None:intergenic 40.0%
GGGTTGCCTTTATTCTTGTT+TGG + chr7_4:58780580-58780599 Msa1166690:intron 40.0%
!! TGTACTAGTTTGGTGCTTGA+GGG - chr7_4:58780927-58780946 None:intergenic 40.0%
!! ATGTACTAGTTTGGTGCTTG+AGG - chr7_4:58780928-58780947 None:intergenic 40.0%
TAAGAATGTGGTTCACAGCT+TGG - chr7_4:58781014-58781033 None:intergenic 40.0%
AATATGCAATAGAACTGCCG+TGG + chr7_4:58781251-58781270 Msa1166690:intron 40.0%
TTAACCTAAATGCATGTGGC+AGG + chr7_4:58781298-58781317 Msa1166690:intron 40.0%
TAACCTAAATGCATGTGGCA+GGG + chr7_4:58781299-58781318 Msa1166690:intron 40.0%
! TGTAGCATGGTTGGATCTTT+TGG + chr7_4:58781340-58781359 Msa1166690:CDS 40.0%
! GCGATTGAGTTGCAAGATTT+CGG + chr7_4:58781592-58781611 Msa1166690:three_prime_UTR 40.0%
! ATTGAGTTGCAAGATTTCGG+TGG + chr7_4:58781595-58781614 Msa1166690:three_prime_UTR 40.0%
! TTGAGTTGCAAGATTTCGGT+GGG + chr7_4:58781596-58781615 Msa1166690:three_prime_UTR 40.0%
ATTTGCCGACGAAAATGAGT+TGG - chr7_4:58781835-58781854 None:intergenic 40.0%
TAACCTAACGTCGTTAGCAA+CGG + chr7_4:58779498-58779517 Msa1166690:CDS 40.0%
! ATGGGTCGTTTAGTTTCTGA+AGG + chr7_4:58779523-58779542 Msa1166690:CDS 40.0%
TTCGCCATTGCTTCATCATT+TGG - chr7_4:58779571-58779590 None:intergenic 40.0%
ACTGATCAATTATCGGAACC+AGG + chr7_4:58779598-58779617 Msa1166690:CDS 40.0%
TCCTGAGCAACAACTTTATG+AGG - chr7_4:58779736-58779755 None:intergenic 40.0%
TCTGACGGTTCTGTCAAATT+TGG + chr7_4:58779757-58779776 Msa1166690:CDS 40.0%
GGTTCTGTCAAATTTGGTCA+CGG + chr7_4:58779763-58779782 Msa1166690:CDS 40.0%
GATCCTGATATTTACACCGA+CGG + chr7_4:58779808-58779827 Msa1166690:CDS 40.0%
TTGAACGGAAATTCTACCGT+CGG - chr7_4:58779827-58779846 None:intergenic 40.0%
AACACCGTCAATACCTTGAA+CGG - chr7_4:58779842-58779861 None:intergenic 40.0%
TCATCTTCATTCTCTTCCTC+CGG - chr7_4:58779874-58779893 None:intergenic 40.0%
!! GATGAGGTTAAGGCTTTGTT+TGG + chr7_4:58780077-58780096 Msa1166690:intron 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG + chr7_4:58780085-58780104 Msa1166690:intron 40.0%
! AGGGGAGGATTTTGCAAAAA+AGG + chr7_4:58780118-58780137 Msa1166690:intron 40.0%
!!! TTTTGAGTTCCCCCAAATGA+GGG - chr7_4:58780223-58780242 None:intergenic 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG - chr7_4:58780224-58780243 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG - chr7_4:58780460-58780479 None:intergenic 40.0%
GGGTTGCCTTTATTCTTGTT+TGG + chr7_4:58780580-58780599 Msa1166690:intron 40.0%
!! TGTACTAGTTTGGTGCTTGA+GGG - chr7_4:58780927-58780946 None:intergenic 40.0%
!! ATGTACTAGTTTGGTGCTTG+AGG - chr7_4:58780928-58780947 None:intergenic 40.0%
TAAGAATGTGGTTCACAGCT+TGG - chr7_4:58781014-58781033 None:intergenic 40.0%
AATATGCAATAGAACTGCCG+TGG + chr7_4:58781251-58781270 Msa1166690:intron 40.0%
TTAACCTAAATGCATGTGGC+AGG + chr7_4:58781298-58781317 Msa1166690:intron 40.0%
TAACCTAAATGCATGTGGCA+GGG + chr7_4:58781299-58781318 Msa1166690:intron 40.0%
! TGTAGCATGGTTGGATCTTT+TGG + chr7_4:58781340-58781359 Msa1166690:CDS 40.0%
! GCGATTGAGTTGCAAGATTT+CGG + chr7_4:58781592-58781611 Msa1166690:three_prime_UTR 40.0%
! ATTGAGTTGCAAGATTTCGG+TGG + chr7_4:58781595-58781614 Msa1166690:three_prime_UTR 40.0%
! TTGAGTTGCAAGATTTCGGT+GGG + chr7_4:58781596-58781615 Msa1166690:three_prime_UTR 40.0%
ATTTGCCGACGAAAATGAGT+TGG - chr7_4:58781835-58781854 None:intergenic 40.0%
TTTCCGTTGCTAACGACGTT+AGG - chr7_4:58779504-58779523 None:intergenic 45.0%
AACGTCGTTAGCAACGGAAA+TGG + chr7_4:58779504-58779523 Msa1166690:CDS 45.0%
ACGTCGTTAGCAACGGAAAT+GGG + chr7_4:58779505-58779524 Msa1166690:CDS 45.0%
GGCTCCAAATGATGAAGCAA+TGG + chr7_4:58779564-58779583 Msa1166690:CDS 45.0%
!! ATAATTTGTTCCGGTGCACC+TGG - chr7_4:58779619-58779638 None:intergenic 45.0%
AATTCCCGAGTATCAAACGG+AGG + chr7_4:58779651-58779670 Msa1166690:CDS 45.0%
ACTCTCCTCCGTTTGATACT+CGG - chr7_4:58779659-58779678 None:intergenic 45.0%
GCCTCATAAAGTTGTTGCTC+AGG + chr7_4:58779732-58779751 Msa1166690:intron 45.0%
GTTGTTGCTCAGGAATCTGA+CGG + chr7_4:58779742-58779761 Msa1166690:intron 45.0%
CTACCGTCGGTGTAAATATC+AGG - chr7_4:58779814-58779833 None:intergenic 45.0%
GACGGTAGAATTTCCGTTCA+AGG + chr7_4:58779826-58779845 Msa1166690:CDS 45.0%
GTTGCTTCTAAACCAAGGAG+AGG + chr7_4:58779937-58779956 Msa1166690:CDS 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr7_4:58780089-58780108 Msa1166690:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr7_4:58780090-58780109 Msa1166690:intron 45.0%
GCAAAAAAGGAAGGAGCAAG+TGG + chr7_4:58780131-58780150 Msa1166690:intron 45.0%
ATAGAAGACATTGGGAGGAG+AGG + chr7_4:58780159-58780178 Msa1166690:intron 45.0%
TAGAAGACATTGGGAGGAGA+GGG + chr7_4:58780160-58780179 Msa1166690:intron 45.0%
ATTGTATTGAGGGAGGGCTT+TGG + chr7_4:58780243-58780262 Msa1166690:intron 45.0%
TTGTATTGAGGGAGGGCTTT+GGG + chr7_4:58780244-58780263 Msa1166690:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr7_4:58780090-58780109 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - chr7_4:58780089-58780108 None:intergenic 45.0%
GCTTGAGGGCAAAGAACATT+AGG - chr7_4:58780913-58780932 None:intergenic 45.0%
TGGGTGGGGATATAAGAATG+TGG - chr7_4:58781026-58781045 None:intergenic 45.0%
TTTCCCTGCCACATGCATTT+AGG - chr7_4:58781305-58781324 None:intergenic 45.0%
! GAACTTGCTTGTAGCATGGT+TGG + chr7_4:58781331-58781350 Msa1166690:CDS 45.0%
TGAGTTGCAAGATTTCGGTG+GGG + chr7_4:58781597-58781616 Msa1166690:three_prime_UTR 45.0%
!! GAGGAGAGTGTCGTATTTGA+AGG - chr7_4:58781745-58781764 None:intergenic 45.0%
AATACGACACTCTCCTCTCT+CGG + chr7_4:58781748-58781767 Msa1166690:three_prime_UTR 45.0%
TTTCCGTTGCTAACGACGTT+AGG - chr7_4:58779504-58779523 None:intergenic 45.0%
AACGTCGTTAGCAACGGAAA+TGG + chr7_4:58779504-58779523 Msa1166690:CDS 45.0%
ACGTCGTTAGCAACGGAAAT+GGG + chr7_4:58779505-58779524 Msa1166690:CDS 45.0%
GGCTCCAAATGATGAAGCAA+TGG + chr7_4:58779564-58779583 Msa1166690:CDS 45.0%
!! ATAATTTGTTCCGGTGCACC+TGG - chr7_4:58779619-58779638 None:intergenic 45.0%
AATTCCCGAGTATCAAACGG+AGG + chr7_4:58779651-58779670 Msa1166690:CDS 45.0%
ACTCTCCTCCGTTTGATACT+CGG - chr7_4:58779659-58779678 None:intergenic 45.0%
GCCTCATAAAGTTGTTGCTC+AGG + chr7_4:58779732-58779751 Msa1166690:intron 45.0%
GTTGTTGCTCAGGAATCTGA+CGG + chr7_4:58779742-58779761 Msa1166690:intron 45.0%
CTACCGTCGGTGTAAATATC+AGG - chr7_4:58779814-58779833 None:intergenic 45.0%
GACGGTAGAATTTCCGTTCA+AGG + chr7_4:58779826-58779845 Msa1166690:CDS 45.0%
GTTGCTTCTAAACCAAGGAG+AGG + chr7_4:58779937-58779956 Msa1166690:CDS 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr7_4:58780089-58780108 Msa1166690:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr7_4:58780090-58780109 Msa1166690:intron 45.0%
GCAAAAAAGGAAGGAGCAAG+TGG + chr7_4:58780131-58780150 Msa1166690:intron 45.0%
ATAGAAGACATTGGGAGGAG+AGG + chr7_4:58780159-58780178 Msa1166690:intron 45.0%
TAGAAGACATTGGGAGGAGA+GGG + chr7_4:58780160-58780179 Msa1166690:intron 45.0%
ATTGTATTGAGGGAGGGCTT+TGG + chr7_4:58780243-58780262 Msa1166690:intron 45.0%
TTGTATTGAGGGAGGGCTTT+GGG + chr7_4:58780244-58780263 Msa1166690:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr7_4:58780090-58780109 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - chr7_4:58780089-58780108 None:intergenic 45.0%
GCTTGAGGGCAAAGAACATT+AGG - chr7_4:58780913-58780932 None:intergenic 45.0%
TGGGTGGGGATATAAGAATG+TGG - chr7_4:58781026-58781045 None:intergenic 45.0%
TTTCCCTGCCACATGCATTT+AGG - chr7_4:58781305-58781324 None:intergenic 45.0%
! GAACTTGCTTGTAGCATGGT+TGG + chr7_4:58781331-58781350 Msa1166690:CDS 45.0%
TGAGTTGCAAGATTTCGGTG+GGG + chr7_4:58781597-58781616 Msa1166690:three_prime_UTR 45.0%
!! GAGGAGAGTGTCGTATTTGA+AGG - chr7_4:58781745-58781764 None:intergenic 45.0%
AATACGACACTCTCCTCTCT+CGG + chr7_4:58781748-58781767 Msa1166690:three_prime_UTR 45.0%
ATTATCGGAACCAGGTGCAC+CGG + chr7_4:58779606-58779625 Msa1166690:CDS 50.0%
CTCTCCTCCGTTTGATACTC+GGG - chr7_4:58779658-58779677 None:intergenic 50.0%
! TGACGGTGTTCTTTTGCCAC+CGG + chr7_4:58779852-58779871 Msa1166690:CDS 50.0%
TCTTCATTCTCTTCCTCCGG+TGG - chr7_4:58779871-58779890 None:intergenic 50.0%
! GGAGTTTTTGCACGGCGAAT+AGG - chr7_4:58779907-58779926 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr7_4:58780088-58780107 Msa1166690:intron 50.0%
TGTATTGAGGGAGGGCTTTG+GGG + chr7_4:58780245-58780264 Msa1166690:intron 50.0%
TTTGGGAGTTTGGAGGGGAA+GGG - chr7_4:58780450-58780469 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - chr7_4:58780088-58780107 None:intergenic 50.0%
! GCTGGAACTTGCTTGTAGCA+TGG + chr7_4:58781327-58781346 Msa1166690:CDS 50.0%
ATTATCGGAACCAGGTGCAC+CGG + chr7_4:58779606-58779625 Msa1166690:CDS 50.0%
CTCTCCTCCGTTTGATACTC+GGG - chr7_4:58779658-58779677 None:intergenic 50.0%
! TGACGGTGTTCTTTTGCCAC+CGG + chr7_4:58779852-58779871 Msa1166690:CDS 50.0%
TCTTCATTCTCTTCCTCCGG+TGG - chr7_4:58779871-58779890 None:intergenic 50.0%
! GGAGTTTTTGCACGGCGAAT+AGG - chr7_4:58779907-58779926 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr7_4:58780088-58780107 Msa1166690:intron 50.0%
TGTATTGAGGGAGGGCTTTG+GGG + chr7_4:58780245-58780264 Msa1166690:intron 50.0%
TTTGGGAGTTTGGAGGGGAA+GGG - chr7_4:58780450-58780469 None:intergenic 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - chr7_4:58780088-58780107 None:intergenic 50.0%
! GCTGGAACTTGCTTGTAGCA+TGG + chr7_4:58781327-58781346 Msa1166690:CDS 50.0%
TGTTTGGGAGTTTGGAGGGG+AGG + chr7_4:58780093-58780112 Msa1166690:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + chr7_4:58780094-58780113 Msa1166690:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + chr7_4:58780095-58780114 Msa1166690:intron 55.0%
ACATTGGGAGGAGAGGGCTT+TGG + chr7_4:58780166-58780185 Msa1166690:intron 55.0%
! GTATTGAGGGAGGGCTTTGG+GGG + chr7_4:58780246-58780265 Msa1166690:intron 55.0%
!! TATTGAGGGAGGGCTTTGGG+GGG + chr7_4:58780247-58780266 Msa1166690:intron 55.0%
!! AGGGCTTTGGGGGGTTATTG+AGG + chr7_4:58780256-58780275 Msa1166690:intron 55.0%
!! GGGCTTTGGGGGGTTATTGA+GGG + chr7_4:58780257-58780276 Msa1166690:intron 55.0%
!! AAGGGAAGGGAGGGTTTTGG+GGG - chr7_4:58780432-58780451 None:intergenic 55.0%
! GAAGGGAAGGGAGGGTTTTG+GGG - chr7_4:58780433-58780452 None:intergenic 55.0%
! GGAAGGGAAGGGAGGGTTTT+GGG - chr7_4:58780434-58780453 None:intergenic 55.0%
GAGTTTGGAGGGGAAGGGAA+GGG - chr7_4:58780445-58780464 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG - chr7_4:58780094-58780113 None:intergenic 55.0%
! TTCAGCACCGAGGTTAGGGT+GGG - chr7_4:58781045-58781064 None:intergenic 55.0%
! TTTCAGCACCGAGGTTAGGG+TGG - chr7_4:58781046-58781065 None:intergenic 55.0%
! CCGTTTCAGCACCGAGGTTA+GGG - chr7_4:58781049-58781068 None:intergenic 55.0%
!! CCCTAACCTCGGTGCTGAAA+CGG + chr7_4:58781046-58781065 Msa1166690:intron 55.0%
! ACCGTTTCAGCACCGAGGTT+AGG - chr7_4:58781050-58781069 None:intergenic 55.0%
GACAAACCGTTTCAGCACCG+AGG - chr7_4:58781055-58781074 None:intergenic 55.0%
! CGGTGCTGAAACGGTTTGTC+TGG + chr7_4:58781055-58781074 Msa1166690:intron 55.0%
GCATGTGGCAGGGAAATTGC+TGG + chr7_4:58781309-58781328 Msa1166690:intron 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + chr7_4:58780093-58780112 Msa1166690:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + chr7_4:58780094-58780113 Msa1166690:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + chr7_4:58780095-58780114 Msa1166690:intron 55.0%
ACATTGGGAGGAGAGGGCTT+TGG + chr7_4:58780166-58780185 Msa1166690:intron 55.0%
! GTATTGAGGGAGGGCTTTGG+GGG + chr7_4:58780246-58780265 Msa1166690:intron 55.0%
!! TATTGAGGGAGGGCTTTGGG+GGG + chr7_4:58780247-58780266 Msa1166690:intron 55.0%
!! AGGGCTTTGGGGGGTTATTG+AGG + chr7_4:58780256-58780275 Msa1166690:intron 55.0%
!! GGGCTTTGGGGGGTTATTGA+GGG + chr7_4:58780257-58780276 Msa1166690:intron 55.0%
!! AAGGGAAGGGAGGGTTTTGG+GGG - chr7_4:58780432-58780451 None:intergenic 55.0%
! GAAGGGAAGGGAGGGTTTTG+GGG - chr7_4:58780433-58780452 None:intergenic 55.0%
! GGAAGGGAAGGGAGGGTTTT+GGG - chr7_4:58780434-58780453 None:intergenic 55.0%
GAGTTTGGAGGGGAAGGGAA+GGG - chr7_4:58780445-58780464 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+AGG - chr7_4:58780094-58780113 None:intergenic 55.0%
! TTCAGCACCGAGGTTAGGGT+GGG - chr7_4:58781045-58781064 None:intergenic 55.0%
! TTTCAGCACCGAGGTTAGGG+TGG - chr7_4:58781046-58781065 None:intergenic 55.0%
! CCGTTTCAGCACCGAGGTTA+GGG - chr7_4:58781049-58781068 None:intergenic 55.0%
!! CCCTAACCTCGGTGCTGAAA+CGG + chr7_4:58781046-58781065 Msa1166690:intron 55.0%
! ACCGTTTCAGCACCGAGGTT+AGG - chr7_4:58781050-58781069 None:intergenic 55.0%
GACAAACCGTTTCAGCACCG+AGG - chr7_4:58781055-58781074 None:intergenic 55.0%
! CGGTGCTGAAACGGTTTGTC+TGG + chr7_4:58781055-58781074 Msa1166690:intron 55.0%
GCATGTGGCAGGGAAATTGC+TGG + chr7_4:58781309-58781328 Msa1166690:intron 55.0%
! CGGTGTTCTTTTGCCACCGG+AGG + chr7_4:58779855-58779874 Msa1166690:CDS 60.0%
! TTGGGAGGAGAGGGCTTTGG+AGG + chr7_4:58780169-58780188 Msa1166690:intron 60.0%
!!! GAAGGGAGGGTTTTGGGGGT+TGG - chr7_4:58780428-58780447 None:intergenic 60.0%
! GGGAAGGGAAGGGAGGGTTT+TGG - chr7_4:58780435-58780454 None:intergenic 60.0%
TTGGAGGGGAAGGGAAGGGA+GGG - chr7_4:58780441-58780460 None:intergenic 60.0%
TTTGGAGGGGAAGGGAAGGG+AGG - chr7_4:58780442-58780461 None:intergenic 60.0%
GGAGTTTGGAGGGGAAGGGA+AGG - chr7_4:58780446-58780465 None:intergenic 60.0%
ATCCCCACCCACCCTAACCT+CGG + chr7_4:58781035-58781054 Msa1166690:intron 60.0%
! CGGTGTTCTTTTGCCACCGG+AGG + chr7_4:58779855-58779874 Msa1166690:CDS 60.0%
! TTGGGAGGAGAGGGCTTTGG+AGG + chr7_4:58780169-58780188 Msa1166690:intron 60.0%
!!! GAAGGGAGGGTTTTGGGGGT+TGG - chr7_4:58780428-58780447 None:intergenic 60.0%
! GGGAAGGGAAGGGAGGGTTT+TGG - chr7_4:58780435-58780454 None:intergenic 60.0%
TTGGAGGGGAAGGGAAGGGA+GGG - chr7_4:58780441-58780460 None:intergenic 60.0%
TTTGGAGGGGAAGGGAAGGG+AGG - chr7_4:58780442-58780461 None:intergenic 60.0%
GGAGTTTGGAGGGGAAGGGA+AGG - chr7_4:58780446-58780465 None:intergenic 60.0%
ATCCCCACCCACCCTAACCT+CGG + chr7_4:58781035-58781054 Msa1166690:intron 60.0%
GGAGTTTGGAGGGGAGGGGA+GGG + chr7_4:58780099-58780118 Msa1166690:intron 65.0%
GAGTTTGGAGGGGAGGGGAG+GGG + chr7_4:58780100-58780119 Msa1166690:intron 65.0%
CACCGAGGTTAGGGTGGGTG+GGG - chr7_4:58781040-58781059 None:intergenic 65.0%
GCACCGAGGTTAGGGTGGGT+GGG - chr7_4:58781041-58781060 None:intergenic 65.0%
! AGCACCGAGGTTAGGGTGGG+TGG - chr7_4:58781042-58781061 None:intergenic 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG + chr7_4:58780099-58780118 Msa1166690:intron 65.0%
GAGTTTGGAGGGGAGGGGAG+GGG + chr7_4:58780100-58780119 Msa1166690:intron 65.0%
CACCGAGGTTAGGGTGGGTG+GGG - chr7_4:58781040-58781059 None:intergenic 65.0%
GCACCGAGGTTAGGGTGGGT+GGG - chr7_4:58781041-58781060 None:intergenic 65.0%
! AGCACCGAGGTTAGGGTGGG+TGG - chr7_4:58781042-58781061 None:intergenic 65.0%
GGGAGTTTGGAGGGGAGGGG+AGG + chr7_4:58780098-58780117 Msa1166690:intron 70.0%
TTTGGAGGGGAGGGGAGGGG+AGG + chr7_4:58780103-58780122 Msa1166690:intron 70.0%
GGGAGTTTGGAGGGGAGGGG+AGG + chr7_4:58780098-58780117 Msa1166690:intron 70.0%
TTTGGAGGGGAGGGGAGGGG+AGG + chr7_4:58780103-58780122 Msa1166690:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 58779481 58781894 58779481 ID=Msa1166690;Name=Msa1166690
chr7_4 mRNA 58779481 58781894 58779481 ID=Msa1166690-mRNA-1;Parent=Msa1166690;Name=Msa1166690-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0.66|0.5|1|0|0|4|422|173
chr7_4 exon 58779481 58779727 58779481 ID=Msa1166690-mRNA-1:exon:18074;Parent=Msa1166690-mRNA-1
chr7_4 exon 58779743 58779958 58779743 ID=Msa1166690-mRNA-1:exon:18075;Parent=Msa1166690-mRNA-1
chr7_4 exon 58781320 58781463 58781320 ID=Msa1166690-mRNA-1:exon:18076;Parent=Msa1166690-mRNA-1
chr7_4 exon 58781558 58781894 58781558 ID=Msa1166690-mRNA-1:exon:18077;Parent=Msa1166690-mRNA-1
chr7_4 CDS 58779481 58779727 58779481 ID=Msa1166690-mRNA-1:cds;Parent=Msa1166690-mRNA-1
chr7_4 CDS 58779743 58779958 58779743 ID=Msa1166690-mRNA-1:cds;Parent=Msa1166690-mRNA-1
chr7_4 CDS 58781320 58781378 58781320 ID=Msa1166690-mRNA-1:cds;Parent=Msa1166690-mRNA-1
chr7_4 three_prime_UTR 58781379 58781463 58781379 ID=Msa1166690-mRNA-1:three_prime_utr;Parent=Msa1166690-mRNA-1
chr7_4 three_prime_UTR 58781558 58781894 58781558 ID=Msa1166690-mRNA-1:three_prime_utr;Parent=Msa1166690-mRNA-1
Gene Sequence

>Msa1166690

ATGGCGGATATTCTGGTTAACCTAACGTCGTTAGCAACGGAAATGGGTCGTTTAGTTTCTGAAGGATATGTTCTAACAGTTTTGGCTCCAAATGATGAAGCAATGGCGAAATTAACGACTGATCAATTATCGGAACCAGGTGCACCGGAACAAATTATATACTATCATATAATTCCCGAGTATCAAACGGAGGAGAGTATGTATAACGCCGTTAGAAGATTTGGGAAAATTAGTTATGATACGTTGCTTGTTGCTCAGGAATCTGACGGTTCTGTCAAATTTGGTCACGGTGATTCTTCTGCTTATTTGTTTGATCCTGATATTTACACCGACGGTAGAATTTCCGTTCAAGGTATTGACGGTGTTCTTTTGCCACCGGAGGAAGAGAATGAAGATGAATCATCAGCACCTATTCGCCGTGCAAAAACTCCACTTGTTAAAGTTGCTTCTAAACCAAGGAGAGGGAAATTGCTGGAACTTGCTTGTAGCATGGTTGGATCTTTTGGAAGAGTCTGCTCATGA
Protein sequence

>Msa1166690

MADILVNLTSLATEMGRLVSEGYVLTVLAPNDEAMAKLTTDQLSEPGAPEQIIYYHIIPEYQTEESMYNAVRRFGKISYDTLLVAQESDGSVKFGHGDSSAYLFDPDIYTDGRISVQGIDGVLLPPEEENEDESSAPIRRAKTPLVKVASKPRRGKLLELACSMVGSFGRVCS*