AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0619010


Find 368 sgRNAs with CRISPR-Local

Find 534 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr4_2 gene 69992944 69999978 69992944 ID=Msa0619010;Name=Msa0619010
chr4_2 mRNA 69992944 69999978 69992944 ID=Msa0619010-mRNA-1;Parent=Msa0619010;Name=Msa0619010-mRNA-1;_AED=0.06;_eAED=0.06;_QI=465|1|1|1|1|1|14|891|1098
chr4_2 exon 69992944 69994422 69992944 ID=Msa0619010-mRNA-1:exon:20363;Parent=Msa0619010-mRNA-1
chr4_2 exon 69994937 69995287 69994937 ID=Msa0619010-mRNA-1:exon:20362;Parent=Msa0619010-mRNA-1
chr4_2 exon 69995408 69995604 69995408 ID=Msa0619010-mRNA-1:exon:20361;Parent=Msa0619010-mRNA-1
chr4_2 exon 69995707 69995980 69995707 ID=Msa0619010-mRNA-1:exon:20360;Parent=Msa0619010-mRNA-1
chr4_2 exon 69996072 69996284 69996072 ID=Msa0619010-mRNA-1:exon:20359;Parent=Msa0619010-mRNA-1
chr4_2 exon 69996376 69996501 69996376 ID=Msa0619010-mRNA-1:exon:20358;Parent=Msa0619010-mRNA-1
chr4_2 exon 69996700 69996837 69996700 ID=Msa0619010-mRNA-1:exon:20357;Parent=Msa0619010-mRNA-1
chr4_2 exon 69996974 69997319 69996974 ID=Msa0619010-mRNA-1:exon:20356;Parent=Msa0619010-mRNA-1
chr4_2 exon 69997422 69997688 69997422 ID=Msa0619010-mRNA-1:exon:20355;Parent=Msa0619010-mRNA-1
chr4_2 exon 69997774 69997963 69997774 ID=Msa0619010-mRNA-1:exon:20354;Parent=Msa0619010-mRNA-1
chr4_2 exon 69998056 69998158 69998056 ID=Msa0619010-mRNA-1:exon:20353;Parent=Msa0619010-mRNA-1
chr4_2 exon 69998275 69998501 69998275 ID=Msa0619010-mRNA-1:exon:20352;Parent=Msa0619010-mRNA-1
chr4_2 exon 69998603 69998798 69998603 ID=Msa0619010-mRNA-1:exon:20351;Parent=Msa0619010-mRNA-1
chr4_2 exon 69999433 69999978 69999433 ID=Msa0619010-mRNA-1:exon:20350;Parent=Msa0619010-mRNA-1
chr4_2 five_prime_UTR 69999514 69999978 69999514 ID=Msa0619010-mRNA-1:five_prime_utr;Parent=Msa0619010-mRNA-1
chr4_2 CDS 69999433 69999513 69999433 ID=Msa0619010-mRNA-1:cds;Parent=Msa0619010-mRNA-1
chr4_2 CDS 69998603 69998798 69998603 ID=Msa0619010-mRNA-1:cds;Parent=Msa0619010-mRNA-1
chr4_2 CDS 69998275 69998501 69998275 ID=Msa0619010-mRNA-1:cds;Parent=Msa0619010-mRNA-1
chr4_2 CDS 69998056 69998158 69998056 ID=Msa0619010-mRNA-1:cds;Parent=Msa0619010-mRNA-1
chr4_2 CDS 69997774 69997963 69997774 ID=Msa0619010-mRNA-1:cds;Parent=Msa0619010-mRNA-1
chr4_2 CDS 69997422 69997688 69997422 ID=Msa0619010-mRNA-1:cds;Parent=Msa0619010-mRNA-1
chr4_2 CDS 69996974 69997319 69996974 ID=Msa0619010-mRNA-1:cds;Parent=Msa0619010-mRNA-1
chr4_2 CDS 69996700 69996837 69996700 ID=Msa0619010-mRNA-1:cds;Parent=Msa0619010-mRNA-1
chr4_2 CDS 69996376 69996501 69996376 ID=Msa0619010-mRNA-1:cds;Parent=Msa0619010-mRNA-1
chr4_2 CDS 69996072 69996284 69996072 ID=Msa0619010-mRNA-1:cds;Parent=Msa0619010-mRNA-1
chr4_2 CDS 69995707 69995980 69995707 ID=Msa0619010-mRNA-1:cds;Parent=Msa0619010-mRNA-1
chr4_2 CDS 69995408 69995604 69995408 ID=Msa0619010-mRNA-1:cds;Parent=Msa0619010-mRNA-1
chr4_2 CDS 69994937 69995287 69994937 ID=Msa0619010-mRNA-1:cds;Parent=Msa0619010-mRNA-1
chr4_2 CDS 69993835 69994422 69993835 ID=Msa0619010-mRNA-1:cds;Parent=Msa0619010-mRNA-1
chr4_2 three_prime_UTR 69992944 69993834 69992944 ID=Msa0619010-mRNA-1:three_prime_utr;Parent=Msa0619010-mRNA-1
Gene Sequence

>Msa0619010

ATGCATACCGGTGGTAGACTCATTGCTGGTTCTCACAACAGGAACGAGTTTGTTCTTATCAATGCTGAAGAAAATGGAAGGATTAAGTCAGTTCGCGAACTGAGTGGACAGATATGTATGATTTGTGGAGATGAGATTGAGGTTACTGTGGATGGGGAGCCCTTTGTTGCTTGCAATGAGTGTGCTTTCCCTGTTTGCCGTCCTTGCTACGAGTACGAGCGAAAAGAAGGGAATCAGGCCTGCCCTCAGTGCAAGACCAGATACAAACGCCTCAAAGGTAGTCCAAGGGTCGAAGGTGATGAAGAAGAGGATGGCGATGACGATCTAGACAATGAGTTTGATTATGATCTTGATGATATGGGCCAGCAACCACATTCAGATTCATTGTTTTCCGGCCGCCTTAACACTGGTCGTGGTTCTAATACTAATATATCTGGTGCAAATTCGGAACATGGATCACCTCCTCTCAATCCTGAAATCCCACTCCTGACTTATGGGGAGGAGGATCCTGAGATATCTTCTGATAGACATGCTCTAATTGTTCCACCATATATGAATCATGGAAACCGTGTTCATCCCATGCCTTATACTGATCCATCGATTCCATTGCAACCAAGACCGATGGTTCCGAAGAAAGACATTGCGGTATATGGATATGGAAGTGTGGCTTGGAAAGACCGAATGGAGGAATGGAAGAAAAGGCAAAGTGACAAACTTCAGGTGGTGAAGCATGAAGGTGATAACAATGATGGAAGTGGAAGTTTCGGAGATGACTTCGATGACCCTGATCTGCCCATGATGGACGAAGGAAGGCAGCCACTTTCTCGGAAACTACCTATCCCTTCAAGCAAGATAAATCCATACAGGATTATCATAATTCTTCGTCTTGTTATTCTTGGGCTTTTTTTCCATTATAGAATTCTCCATCCAGTTAATGATGCATATGGCTTGTGGCTGACATCAGTCATATGTGAAATATGGTTTGCTGTATCTTGGATAATGGATCAGTTTCCAAAATGGTACCCAATAACGCGAGAAACATACCTTGATCGTCTTTCACTGAGGTATGAGAAAGAAGGGAAACCCTCCCAGTTGGCAAGTGTTGATGTTTTTGTCAGTACTGTTGATCCTATGAAAGAACCCCCACTGATCACAGCAAACACTGTTCTGTCTATCCTTGCTGTTGACTATCCAGTTGATAAAGTTGCATGCTATGTCTCGGATGATGGTGCTGCTATGCTCACTTTTGAAGCACTTTCTGAGACATCTGAATTTGCTAGGAAGTGGGTTCCGTTTTGCAAGAAATATAATATTGAGCCCCGTGCCCCAGAATGGTATTTCGGTCAGAAGATGGACTATCTGAAAAATAAAGTGCATCCCGCGTTTGTTAGGGAAAGAAGAGCGATGAAGAGAGATTATGAAGAATTTAAGGTGAGGATTAATAGTTTGGTGGCAACGGCACAAAAGGTTCCCGAGGATGGATGGACTATGCAGGATGGGACTCCGTGGCCTGGAAATGATGTGCGGGATCATCCTGGCATGATTCAGGTCTTCCTTGGTCACGATGGTGTTCGCGATGTTGAGGGAAATGAGTTACCTCGCTTAGTTTATGTTTCTAGAGAAAAAAGGCCTGGGTTTGATCACCACAAAAAGGCTGGAGCCATGAATTCTCTGGTACGAGCGGCAGCAATTATCACAAACGCACCTTATATTCTGAATGTTGACTGTGATCATTACATCAATAATAGCAAGGCTCTTAGAGAGGCCATGTGTTTTATGATGGACCCTCAACTTGGCAAGAAGATCTGCTATGTACAATTTCCACAAAGATTTGATGGAATTGATCGACATGACAGATACTCCAACAGAAATGTTGTATTTTTCGATATAAACATGAAAGGATTGGATGGATTACAAGGTCCAATTTATGTTGGAACTGGATGTGTTTTCAGAAGGTATGCACTCTACGGATATGATGCACCTGTCAAGAAGAAGCCGCCAAGCAAAACCTGCAACTGTTTGCCAAAATGGTGCTGCTGGTGCTGTGGCTCTAGAAAGAAAAAGAATCTCAACAATAAGAAAGATAAAAAGAAGAAGGTGAAGCATAGCGAAGCATCAAAGCAAATTCACGCACTTGAAAATATTGAGGCAGGGAATGAAGGAGCCATCGTCGAGAAATCATCCAATTTGACTCAATTGAAAATGGAGAAGAGGTTTGGACAGTCTCCAGTGTTTGTTGCCTCTACACTTCTGGATAATGGTGGAATTCCACCTGGAGTGAGTCCTGCATCGCTGTTAAAAGAAGCCATTCAAGTTATCAGTTGTGGTTATGAAGACAAAACCGAATGGGGAAAAGAGGTTGGATGGATCTATGGTTCTGTGACAGAGGATATCTTGACTGGTTTCAAAATGCATTGCCATGGTTGGCGGTCTGTGTATTGTATCCCTAAGCGGCCTGCATTCAAGGGTTCAGCACCCATCAATCTTTCAGATCGTCTACACCAAGTTCTTCGTTGGGCTCTTGGTTCTGTTGAGATCTTTTTCAGCAAACATTGTCCAATTTGGTACGGCTACGGTGGTGGGTTGAAGTTGTTGGAACGTTTTTCCTACATAAATTCAGTCGTGTATCCTTGGACTTCCCTCCCATTGATTGTCTACTGTACTCTACCGGCCATATGTCTTCTGACCGGAAAATTTATTGTTCCTGAGATAAGCAACTATGCAAGTCTTGTGTTCATGGCCCTCTTCATATCCATCGCAGCAACCGGTATCCTTGAGATGCAATGGGGTGGTGTTGGAATAGATGATTGGTGGAGGAATGAACAGTTTTGGGTGATTGGAGGTGCTTCATCACATTTTTTTGCCCTTTTCCAAGGTTTGCTCAAGGTTTTAGCTGGTGTCGACACAAACTTCACTGTTACATCAAAAGCAGCCGACGATGGAGAATTCTCGGAGCTCTACGTATTCAAATGGACTTCGCTATTAATCCCTCCAATGACGCTATTAATCATGAATATTGTGGGCGTGATTGTTGGTGTCTCCGATGCGATCAATAATGGTTATGACTCATGGGGACCTCTGTTCGGTAGATTATTCTTTGCCCTTTGGGTTATCATACATCTTTATCCATTCCTCAAGGGTTTGCTTGGGAAACAGGATAGGATGCCAACCATTGTTTTGGTTTGGTCAATCTTGCTAGCTTCCATCTTGACTCTCTTGTGGGTTAGAGTTAACCCTTTTGTATCAAGAGATGGTCCTGTCTTAGAAATTTGTGGATTGAATTGTGAGGATACATGA

Protein sequence

>Msa0619010

MHTGGRLIAGSHNRNEFVLINAEENGRIKSVRELSGQICMICGDEIEVTVDGEPFVACNECAFPVCRPCYEYERKEGNQACPQCKTRYKRLKGSPRVEGDEEEDGDDDLDNEFDYDLDDMGQQPHSDSLFSGRLNTGRGSNTNISGANSEHGSPPLNPEIPLLTYGEEDPEISSDRHALIVPPYMNHGNRVHPMPYTDPSIPLQPRPMVPKKDIAVYGYGSVAWKDRMEEWKKRQSDKLQVVKHEGDNNDGSGSFGDDFDDPDLPMMDEGRQPLSRKLPIPSSKINPYRIIIILRLVILGLFFHYRILHPVNDAYGLWLTSVICEIWFAVSWIMDQFPKWYPITRETYLDRLSLRYEKEGKPSQLASVDVFVSTVDPMKEPPLITANTVLSILAVDYPVDKVACYVSDDGAAMLTFEALSETSEFARKWVPFCKKYNIEPRAPEWYFGQKMDYLKNKVHPAFVRERRAMKRDYEEFKVRINSLVATAQKVPEDGWTMQDGTPWPGNDVRDHPGMIQVFLGHDGVRDVEGNELPRLVYVSREKRPGFDHHKKAGAMNSLVRAAAIITNAPYILNVDCDHYINNSKALREAMCFMMDPQLGKKICYVQFPQRFDGIDRHDRYSNRNVVFFDINMKGLDGLQGPIYVGTGCVFRRYALYGYDAPVKKKPPSKTCNCLPKWCCWCCGSRKKKNLNNKKDKKKKVKHSEASKQIHALENIEAGNEGAIVEKSSNLTQLKMEKRFGQSPVFVASTLLDNGGIPPGVSPASLLKEAIQVISCGYEDKTEWGKEVGWIYGSVTEDILTGFKMHCHGWRSVYCIPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSKHCPIWYGYGGGLKLLERFSYINSVVYPWTSLPLIVYCTLPAICLLTGKFIVPEISNYASLVFMALFISIAATGILEMQWGGVGIDDWWRNEQFWVIGGASSHFFALFQGLLKVLAGVDTNFTVTSKAADDGEFSELYVFKWTSLLIPPMTLLIMNIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIIHLYPFLKGLLGKQDRMPTIVLVWSILLASILTLLWVRVNPFVSRDGPVLEICGLNCEDT*