AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1322720

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1322720 MtrunA17_Chr8g0355421 94.526 1023 56 0 1 1023 1 1023 0.0 1941
Msa1322720 MtrunA17_Chr1g0173111 63.143 1031 371 4 1 1023 1 1030 0.0 1333
Msa1322720 MtrunA17_Chr8g0382071 62.959 1034 365 5 4 1023 5 1034 0.0 1306
Msa1322720 MtrunA17_Chr5g0401211 53.085 1021 456 10 1 1005 1 1014 0.0 1036
Msa1322720 MtrunA17_Chr3g0134771 51.327 1017 482 7 1 1005 1 1016 0.0 996
Msa1322720 MtrunA17_Chr4g0020551 57.558 860 356 6 78 929 15 873 0.0 975
Msa1322720 MtrunA17_Chr4g0054021 51.538 943 441 5 72 1005 2 937 0.0 931
Msa1322720 MtrunA17_Chr4g0002331 42.483 1031 544 16 13 1007 66 1083 0.0 748
Msa1322720 MtrunA17_Chr2g0298871 41.917 1033 551 11 13 1005 46 1069 0.0 740
Msa1322720 MtrunA17_Chr6g0456201 40.760 974 528 17 68 1005 46 1006 0.0 673
Msa1322720 MtrunA17_Chr7g0260401 38.566 1032 583 16 15 1010 28 1044 0.0 632
Msa1322720 MtrunA17_Chr8g0340261 40.000 570 295 11 453 1005 2 541 1.53e-122 385
Msa1322720 MtrunA17_Chr8g0340271 42.308 390 206 8 87 463 69 452 1.04e-85 285
Msa1322720 MtrunA17_Chr8g0346461 26.927 1025 591 28 121 1001 28 1038 3.58e-85 297
Msa1322720 MtrunA17_Chr2g0334231 39.825 457 249 9 13 453 56 502 2.59e-83 279
Msa1322720 MtrunA17_Chr7g0263361 28.991 852 505 22 100 865 18 855 4.87e-80 283
Msa1322720 MtrunA17_Chr4g0005551 26.660 964 600 26 92 1005 61 967 2.12e-77 274
Msa1322720 MtrunA17_Chr5g0447521 26.854 890 571 19 152 1000 151 1001 1.17e-75 270
Msa1322720 MtrunA17_Chr3g0134951 28.274 817 499 20 126 874 23 820 1.48e-68 248
Msa1322720 MtrunA17_Chr4g0072131 26.287 719 441 20 112 820 24 663 1.12e-52 200
Msa1322720 MtrunA17_Chr2g0334221 39.189 296 158 7 481 759 44 334 1.74e-51 185
Msa1322720 MtrunA17_Chr1g0147981 26.052 737 449 26 97 820 24 677 1.62e-50 193
Msa1322720 MtrunA17_Chr8g0365021 25.921 706 433 22 126 820 104 730 1.28e-48 188
Msa1322720 MtrunA17_Chr2g0298031 25.670 709 432 22 126 820 39 666 2.37e-48 187
Msa1322720 MtrunA17_Chr3g0138931 25.313 719 448 21 112 820 21 660 7.84e-47 182
Msa1322720 MtrunA17_Chr1g0148031 25.174 719 449 20 112 820 21 660 7.91e-47 182
Msa1322720 MtrunA17_Chr2g0333721 24.681 705 447 19 126 821 32 661 7.64e-46 179
Msa1322720 MtrunA17_Chr2g0304941 25.035 711 437 24 126 821 35 664 4.51e-45 176
Msa1322720 MtrunA17_Chr4g0059961 24.549 721 455 21 112 821 25 667 4.71e-45 176
Msa1322720 MtrunA17_Chr4g0065481 24.583 720 452 22 112 820 22 661 2.88e-44 174
Msa1322720 MtrunA17_Chr8g0381711 24.198 810 500 26 199 963 89 829 1.87e-42 167
Msa1322720 MtrunA17_Chr8g0335291 23.404 705 461 17 126 821 36 670 5.99e-42 166
Msa1322720 MtrunA17_Chr2g0334201 47.590 166 86 1 843 1007 1 166 6.78e-41 149
Msa1322720 MtrunA17_Chr6g0452721 23.333 720 465 21 112 821 23 665 2.52e-39 158
Msa1322720 MtrunA17_Chr7g0276551 23.884 448 282 11 390 834 42 433 9.96e-31 130
Msa1322720 MtrunA17_Chr4g0020561 52.222 90 41 1 936 1023 1 90 4.84e-21 88.6
Msa1322720 MtrunA17_Chr2g0297051 32.044 181 92 5 639 818 821 971 2.64e-15 81.3
Msa1322720 MtrunA17_Chr2g0297051 27.477 222 152 5 233 451 476 691 4.52e-12 70.5
Msa1322720 MtrunA17_Chr4g0052521 32.402 179 90 5 639 816 789 937 5.77e-15 80.1
Msa1322720 MtrunA17_Chr2g0297871 27.083 240 131 10 638 872 356 556 1.07e-13 75.5
Msa1322720 MtrunA17_Chr8g0363911 25.117 426 211 18 393 725 363 773 1.29e-13 75.9
Msa1322720 MtrunA17_Chr8g0374391 31.098 164 84 3 639 802 35 169 1.61e-13 71.6
Msa1322720 MtrunA17_Chr8g0374331 31.098 164 84 3 639 802 42 176 1.68e-13 71.6
Msa1322720 MtrunA17_Chr4g0071991 26.540 211 117 6 635 845 512 684 1.25e-12 72.4
Msa1322720 MtrunA17_Chr3g0136331 27.602 221 149 5 244 460 359 572 3.67e-12 70.9
Msa1322720 MtrunA17_Chr4g0020541 53.448 58 26 1 1 57 1 58 4.57e-12 62.4
Msa1322720 MtrunA17_Chr8g0339181 31.319 182 89 4 628 802 741 893 3.90e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1322720 AT3G57330.1 58.835 1030 408 7 1 1023 1 1021 0.0 1222
Msa1322720 AT2G41560.1 58.738 1030 412 7 1 1023 1 1024 0.0 1215
Msa1322720 AT3G57330.2 59.507 973 382 6 54 1023 3 966 0.0 1175
Msa1322720 AT2G41560.2 59.871 927 367 4 97 1023 1 922 0.0 1135
Msa1322720 AT2G41560.3 59.871 927 367 4 97 1023 1 922 0.0 1135
Msa1322720 AT2G41560.4 59.871 927 367 4 97 1023 1 922 0.0 1135
Msa1322720 AT4G37640.1 51.721 1017 476 8 1 1005 1 1014 0.0 1022
Msa1322720 AT2G22950.1 51.866 1018 474 8 1 1005 1 1015 0.0 1015
Msa1322720 AT1G27770.4 50.934 1017 487 6 1 1005 1 1017 0.0 996
Msa1322720 AT1G27770.1 50.934 1017 487 6 1 1005 1 1017 0.0 996
Msa1322720 AT1G27770.3 52.047 928 442 2 81 1005 27 954 0.0 945
Msa1322720 AT4G29900.1 42.172 1022 553 14 13 1005 37 1049 0.0 761
Msa1322720 AT4G29900.2 42.172 1022 553 14 13 1005 37 1049 0.0 761
Msa1322720 AT3G21180.1 42.341 1025 552 13 13 1007 51 1066 0.0 753
Msa1322720 AT5G57110.1 41.748 1030 558 12 6 1005 30 1047 0.0 751
Msa1322720 AT5G57110.3 41.748 1030 558 12 6 1005 30 1047 0.0 751
Msa1322720 AT5G57110.2 41.748 1030 558 12 6 1005 30 1047 0.0 751
Msa1322720 AT3G63380.1 40.318 1007 543 17 34 1007 27 1008 0.0 671
Msa1322720 AT3G22910.1 41.020 941 514 13 87 1005 81 1002 0.0 637
Msa1322720 AT1G27770.2 47.476 634 322 5 1 623 1 634 6.58e-179 546
Msa1322720 AT1G27770.2 57.929 309 130 0 697 1005 635 943 1.14e-115 379
Msa1322720 AT5G53010.1 32.567 1001 569 24 54 995 82 1035 2.51e-135 434
Msa1322720 AT5G53010.2 32.184 696 422 16 54 709 82 767 1.46e-91 310
Msa1322720 AT4G00900.2 27.852 1052 569 33 112 1001 14 1037 8.64e-87 302
Msa1322720 AT4G00900.1 27.852 1052 569 33 112 1001 14 1037 8.64e-87 302
Msa1322720 AT1G07670.2 28.708 836 506 21 117 874 36 859 4.07e-79 280
Msa1322720 AT1G07670.1 28.708 836 506 21 117 874 36 859 4.07e-79 280
Msa1322720 AT1G10130.1 29.182 819 496 19 126 878 23 823 5.85e-78 276
Msa1322720 AT1G07810.1 28.743 835 499 23 121 874 40 859 7.41e-78 277
Msa1322720 AT1G17260.1 24.650 714 460 18 112 820 27 667 6.39e-48 186
Msa1322720 AT1G80660.3 23.922 719 462 18 112 821 24 666 5.07e-47 182
Msa1322720 AT1G80660.4 23.922 719 462 18 112 821 24 666 5.62e-47 182
Msa1322720 AT1G80660.1 23.922 719 462 18 112 821 24 666 6.68e-47 182
Msa1322720 AT4G30190.1 25.450 723 442 23 112 820 19 658 7.84e-47 182
Msa1322720 AT1G80660.2 25.251 598 372 15 230 821 9 537 4.42e-46 179
Msa1322720 AT2G24520.3 24.893 703 444 21 126 820 14 640 6.59e-46 179
Msa1322720 AT2G24520.1 24.893 703 444 21 126 820 14 640 6.59e-46 179
Msa1322720 AT2G24520.2 24.893 703 444 21 126 820 77 703 1.14e-45 179
Msa1322720 AT3G60330.4 23.916 715 464 18 112 821 22 661 1.17e-45 179
Msa1322720 AT3G60330.3 23.916 715 464 18 112 821 22 661 1.17e-45 179
Msa1322720 AT3G60330.2 23.776 715 465 18 112 821 22 661 2.75e-45 177
Msa1322720 AT3G60330.1 23.776 715 465 18 112 821 22 661 2.75e-45 177
Msa1322720 AT5G57350.4 24.306 720 454 21 112 820 20 659 2.21e-44 174
Msa1322720 AT5G57350.2 24.306 720 454 21 112 820 20 659 2.21e-44 174
Msa1322720 AT5G57350.1 24.306 720 454 21 112 820 20 659 2.21e-44 174
Msa1322720 AT2G18960.1 25.957 601 360 18 230 820 133 658 6.47e-44 173
Msa1322720 AT2G18960.3 25.957 601 360 18 230 820 69 594 6.92e-44 172
Msa1322720 AT2G18960.2 25.957 601 360 18 230 820 69 594 6.92e-44 172
Msa1322720 AT5G62670.1 24.380 726 450 22 112 821 23 665 7.29e-44 173
Msa1322720 AT3G47950.1 24.758 723 451 24 112 821 27 669 5.90e-43 170
Msa1322720 AT3G47950.2 24.758 723 451 24 112 821 27 669 5.90e-43 170
Msa1322720 AT2G07560.1 24.481 723 452 20 112 821 22 663 4.58e-42 167
Msa1322720 AT3G42640.1 24.276 725 452 22 112 821 22 664 5.98e-42 167
Msa1322720 AT4G30190.2 24.339 756 442 25 112 820 19 691 1.72e-41 166
Msa1322720 AT2G24520.4 25.115 434 273 12 390 820 13 397 7.45e-32 134
Msa1322720 AT5G57350.3 23.733 434 279 10 390 820 13 397 6.28e-31 130
Msa1322720 AT4G30110.1 29.524 210 111 5 636 845 508 680 3.05e-15 81.3
Msa1322720 AT4G30110.2 29.524 210 111 5 636 845 508 680 3.05e-15 81.3
Msa1322720 AT4G11730.1 23.662 355 232 9 112 459 23 345 3.66e-15 80.9
Msa1322720 AT5G44790.1 31.658 199 100 6 639 836 798 961 8.07e-15 80.1
Msa1322720 AT5G44790.1 25.118 211 152 3 248 458 467 671 1.36e-11 69.3
Msa1322720 AT2G19110.2 27.143 210 115 7 636 845 518 689 1.15e-11 69.7
Msa1322720 AT2G19110.3 27.143 210 115 7 636 845 518 689 1.15e-11 69.7
Msa1322720 AT2G19110.1 27.143 210 115 7 636 845 518 689 1.15e-11 69.7

Find 237 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATACCCGGCAACACTATTT+TGG 0.101176 8_4:-29870645 Msa1322720:CDS
CCATTTCGGAAGCATTATTT+TGG 0.162724 8_4:+29869557 None:intergenic
GATTCAGCATTGTTGGAATT+TGG 0.197819 8_4:-29869490 Msa1322720:CDS
TCCCACACAAATTTAATAAA+AGG 0.197886 8_4:+29870591 None:intergenic
GGTGAGGTTGTTGCGGTTAC+TGG 0.202382 8_4:-29868749 Msa1322720:CDS
GAATAACATGGAGGAATTTC+TGG 0.218281 8_4:-29871525 Msa1322720:exon
TTCAATGGTTAAACCATTAT+TGG 0.219739 8_4:+29868976 None:intergenic
AATAGTGTTGCCGGGTATTT+AGG 0.245250 8_4:+29870649 None:intergenic
ATCAGTGTATAGCCATTATC+AGG 0.254832 8_4:+29869145 None:intergenic
ATATCAAGTTATTGTCCTTA+TGG 0.257926 8_4:-29867398 Msa1322720:CDS
TTGGAATTTGGCTTGCTGTT+GGG 0.262270 8_4:-29869478 Msa1322720:CDS
GCTTTGGGTCAACTTGATTA+TGG 0.279614 8_4:-29867548 Msa1322720:CDS
CACACAATTCAGGAAGAATA+TGG 0.295705 8_4:-29866596 Msa1322720:three_prime_UTR
CCACATATCATATTCATCTT+TGG 0.298952 8_4:-29866528 Msa1322720:three_prime_UTR
ATCTTGTAAACAGGATTAAA+AGG 0.303825 8_4:+29869406 None:intergenic
GACATTGTTCATTTGTCAAT+TGG 0.314846 8_4:-29870297 Msa1322720:CDS
GCTACTATTGTTGGTAAGAT+TGG 0.315134 8_4:-29870015 Msa1322720:CDS
TAACAGCTGTGCAGTTGCTT+TGG 0.320705 8_4:-29867564 Msa1322720:CDS
TATATTTGCTTAGATAAAAC+AGG 0.321402 8_4:-29869721 Msa1322720:CDS
TCTCAGTGGCAGCTGGTGTT+AGG 0.325342 8_4:-29870680 Msa1322720:CDS
TTGTTTATCCTTAACCATTT+CGG 0.327461 8_4:+29869543 None:intergenic
CTCATGTTGTAATTTCATAA+GGG 0.328352 8_4:-29866405 Msa1322720:three_prime_UTR
GTCAATAAACTATGGATATC+TGG 0.329156 8_4:-29869673 Msa1322720:CDS
GAACTTGTCTACAATGGATA+TGG 0.330173 8_4:-29868939 Msa1322720:CDS
AACAGCTGTGCAGTTGCTTT+GGG 0.332787 8_4:-29867563 Msa1322720:CDS
CGAAAAGTTTAACAAATGAT+AGG 0.337177 8_4:-29869792 Msa1322720:CDS
AGTTTCCTTTCGCAGAATAT+TGG 0.337654 8_4:-29866497 Msa1322720:three_prime_UTR
TGGAATTTGGCTTGCTGTTG+GGG 0.340097 8_4:-29869477 Msa1322720:CDS
TTTATCTAAGCAAATATAAC+TGG 0.340269 8_4:+29869726 None:intergenic
GGAGTTGCCATGGGATTATC+AGG 0.341427 8_4:-29868683 Msa1322720:CDS
ATGTCCAATGCCAATTGTAT+AGG 0.342118 8_4:-29869444 Msa1322720:CDS
CCATTGAAGGACAACAATTT+CGG 0.343261 8_4:-29868961 Msa1322720:CDS
GAAAACAACATCCCTGATAA+TGG 0.343419 8_4:-29869157 Msa1322720:CDS
GGTGGAGGAAACGCCATTAC+AGG 0.349939 8_4:-29870055 Msa1322720:CDS
ACATTGTTCATTTGTCAATT+GGG 0.356910 8_4:-29870296 Msa1322720:CDS
TCAACTTTCATTCAATATCA+TGG 0.361147 8_4:+29871595 None:intergenic
TCTCATGTTGTAATTTCATA+AGG 0.361383 8_4:-29866406 Msa1322720:three_prime_UTR
TTGTGGAGATGAAAGATAAT+AGG 0.363721 8_4:-29869645 Msa1322720:CDS
TCCAACAGATTCAGCATTGT+TGG 0.368984 8_4:-29869497 Msa1322720:CDS
CCGAAATTGTTGTCCTTCAA+TGG 0.371993 8_4:+29868961 None:intergenic
GCTGATGGGATTTGCATATC+AGG 0.373463 8_4:-29870261 Msa1322720:CDS
AACAAATACAGGAAAAGCTT+CGG 0.374257 8_4:-29871010 Msa1322720:intron
TATACACTGATAGCCATTCT+AGG 0.381451 8_4:-29869133 Msa1322720:CDS
CGCAGAACTTCAATGATTGA+TGG 0.382720 8_4:+29870409 None:intergenic
TCTGGAAGACTTCGAATTAG+TGG 0.383721 8_4:-29871507 Msa1322720:CDS
TGTGGTATACTCACCAATAA+TGG 0.385351 8_4:-29868989 Msa1322720:CDS
CCAAAATAATGCTTCCGAAA+TGG 0.387368 8_4:-29869557 Msa1322720:CDS
ACAAGAGATGCAATTGAATC+TGG 0.388276 8_4:+29870771 None:intergenic
GAACAAGAACATTTCAGTTA+AGG 0.389176 8_4:-29870373 Msa1322720:CDS
AACAGCCATTATTGTTGCTC+TGG 0.393158 8_4:-29867700 Msa1322720:CDS
TTTATTGACCACCATGCAAT+TGG 0.395223 8_4:+29869687 None:intergenic
TAAACCCAAAATAGTGTTGC+CGG 0.395664 8_4:+29870640 None:intergenic
CCATAGCTAGCACACAATTC+AGG 0.395773 8_4:-29866606 Msa1322720:exon
AGTTGAAAGAAAAGTCAGTT+TGG 0.396304 8_4:-29871578 Msa1322720:five_prime_UTR
GCATGGTGGTCAATAAACTA+TGG 0.398688 8_4:-29869681 Msa1322720:CDS
TCGGGAACCAAAGTGATAGA+TGG 0.398940 8_4:-29870156 Msa1322720:CDS
CCGTTCAGTTTCACCTGTAA+TGG 0.400443 8_4:+29870042 None:intergenic
TCTTAAGTTTCCTATACAAT+TGG 0.400584 8_4:+29869434 None:intergenic
TTTGCCCCGATTGCTATTGC+TGG 0.407392 8_4:-29870954 Msa1322720:intron
TAATGCTTCCGAAATGGTTA+AGG 0.411681 8_4:-29869551 Msa1322720:CDS
CGAATCAAGTTTAACTGGTC+AGG 0.413992 8_4:-29870220 Msa1322720:CDS
CAATAACTTGATATATGCTT+TGG 0.414253 8_4:+29867407 None:intergenic
TATGTTGAAGTGCATGTTGA+TGG 0.415403 8_4:-29870807 Msa1322720:CDS
TTTATTTCTGCTTCTGTCAC+AGG 0.417306 8_4:-29867669 Msa1322720:intron
CTGCAAGTCGGAACCTTCTA+CGG 0.418098 8_4:+29871420 None:intergenic
ACTACACAGGGTCACTGATC+TGG 0.419069 8_4:-29871547 Msa1322720:five_prime_UTR
ACAAATACAGGAAAAGCTTC+GGG 0.424408 8_4:-29871009 Msa1322720:intron
AACGGAGTTGCTACTATTGT+TGG 0.425293 8_4:-29870024 Msa1322720:CDS
GTTGGAATTTGGCTTGCTGT+TGG 0.425604 8_4:-29869479 Msa1322720:CDS
ACGGCCAATGGTAAACCTTC+TGG 0.425748 8_4:+29869838 None:intergenic
TATTGTCAATATTATCAAAT+GGG 0.430176 8_4:-29867769 Msa1322720:CDS
CTATTGTCAATATTATCAAA+TGG 0.432147 8_4:-29867770 Msa1322720:CDS
ACATGCACTTCAACATAATC+AGG 0.433146 8_4:+29870813 None:intergenic
ACTGTCATCATCTTGTAAAC+AGG 0.437296 8_4:+29869397 None:intergenic
ATCGACGAATCAAGTTTAAC+TGG 0.440475 8_4:-29870225 Msa1322720:CDS
TATTCGCCGTGACGGTTACC+AGG 0.442870 8_4:-29866643 Msa1322720:CDS
TTCATAAGTTCATCGTTAAG+TGG 0.443590 8_4:+29867493 None:intergenic
GATCACCAGAGCAACAATAA+TGG 0.446023 8_4:+29867695 None:intergenic
AATAATGGTTTAACCATTGA+AGG 0.446573 8_4:-29868974 Msa1322720:CDS
CTCAGTGGCAGCTGGTGTTA+GGG 0.453525 8_4:-29870679 Msa1322720:CDS
TCTTCTTACATTAGCTGTGT+TGG 0.454285 8_4:-29869980 Msa1322720:CDS
GTTTCCTATACAATTGGCAT+TGG 0.455109 8_4:+29869440 None:intergenic
TTGGTTCCCGAAAGTAGAAA+AGG 0.455301 8_4:+29870168 None:intergenic
ACCGTACCAGCAATAGCAAT+CGG 0.461938 8_4:+29870948 None:intergenic
TTGGAGAAGCGCCGTCTCGC+TGG 0.462145 8_4:-29871453 Msa1322720:CDS
AAAAGTATACGAAGGTTATG+TGG 0.464505 8_4:+29866296 None:intergenic
GTAATCATTGTGCAGTTCCT+TGG 0.465684 8_4:-29866786 Msa1322720:CDS
CTTGAAAATTAAGAACCATA+AGG 0.467857 8_4:+29867383 None:intergenic
TCGATTTATGATCTCGTAGT+AGG 0.467977 8_4:-29870321 Msa1322720:CDS
ATCATTGAAGTTCTGCGAAT+GGG 0.468883 8_4:-29870403 Msa1322720:CDS
TGGTGAAGAATCCCCGTAGA+AGG 0.469444 8_4:-29871433 Msa1322720:CDS
AGACTTCGAATTAGTGGATA+AGG 0.469617 8_4:-29871501 Msa1322720:CDS
AGGATCATTGATTCCTAGAA+TGG 0.472659 8_4:+29869120 None:intergenic
TCCAACAATGCTGAATCTGT+TGG 0.477694 8_4:+29869496 None:intergenic
CCCCGACCCATCTATCACTT+TGG 0.478611 8_4:+29870149 None:intergenic
CCTGAATTGTGTGCTAGCTA+TGG 0.479391 8_4:+29866606 None:intergenic
TCAGTTAAGGTCACACGAGA+TGG 0.480503 8_4:-29870360 Msa1322720:CDS
TTTGAATGACGTAGGGGTGG+AGG 0.483232 8_4:-29870070 Msa1322720:CDS
CTGTACAGTGCCTCTGAACT+TGG 0.485411 8_4:-29866754 Msa1322720:CDS
CATTGTTCATTTGTCAATTG+GGG 0.486132 8_4:-29870295 Msa1322720:CDS
CTGTTGGCATGAGGACTGAA+TGG 0.488590 8_4:-29870110 Msa1322720:CDS
TTTCAAGGGAAGAATATACT+TGG 0.490158 8_4:-29867367 Msa1322720:CDS
GGCTCACTGACAAGAGCTAA+AGG 0.491072 8_4:+29867514 None:intergenic
CTTTCTGCATGTGAAGCAAT+GGG 0.493063 8_4:-29869754 Msa1322720:CDS
GTAACCATTGCCATGGTCAC+TGG 0.494913 8_4:-29869049 Msa1322720:CDS
CTTCGTGTCTCAGTGGCAGC+TGG 0.494916 8_4:-29870687 Msa1322720:CDS
TGCAAGTCGGAACCTTCTAC+GGG 0.497897 8_4:+29871421 None:intergenic
ACCAAAGTGATAGATGGGTC+GGG 0.504380 8_4:-29870150 Msa1322720:CDS
TCTTTGACACCAAGGCGTAT+AGG 0.504928 8_4:+29869100 None:intergenic
AGCAACTGCACAGCTGTTAG+CGG 0.505639 8_4:+29867568 None:intergenic
GGAATTTGGCTTGCTGTTGG+GGG 0.506773 8_4:-29869476 Msa1322720:CDS
TCTTTCTGCATGTGAAGCAA+TGG 0.508859 8_4:-29869755 Msa1322720:CDS
GAATTTGGCTTGCTGTTGGG+GGG 0.509071 8_4:-29869475 Msa1322720:CDS
AGGTTAAGTGTCACGGCCAA+TGG 0.512800 8_4:+29869826 None:intergenic
ATTGACCACCATGCAATTGG+AGG 0.513485 8_4:+29869690 None:intergenic
GTTGTTGCGGTTACTGGTGA+TGG 0.513631 8_4:-29868743 Msa1322720:CDS
CCGTACCAGCAATAGCAATC+GGG 0.513887 8_4:+29870949 None:intergenic
GGTGGAAAATTTGCCACTGA+AGG 0.513938 8_4:-29870513 Msa1322720:CDS
ATGTGTGCCTCATGCAGTGC+AGG 0.514389 8_4:+29868707 None:intergenic
AAGAATATACTTGGTATAAG+TGG 0.514915 8_4:-29867358 Msa1322720:CDS
ATCAATGATCCTATACGCCT+TGG 0.518802 8_4:-29869109 Msa1322720:CDS
TGGTTCCCGAAAGTAGAAAA+GGG 0.521833 8_4:+29870169 None:intergenic
CACCGATCATGACATAATAC+AGG 0.523469 8_4:+29866455 None:intergenic
CTTGTTAGTCTTCCCAATGG+TGG 0.523606 8_4:-29869373 Msa1322720:CDS
TGCCCTATTACAAGAAAAGC+AGG 0.524477 8_4:-29871381 Msa1322720:intron
GCTTATCTGAAGGATATGTT+TGG 0.526629 8_4:-29868770 Msa1322720:CDS
TGTTGGCATGAGGACTGAAT+GGG 0.530670 8_4:-29870109 Msa1322720:CDS
GCAACTGCACAGCTGTTAGC+GGG 0.531543 8_4:+29867569 None:intergenic
CAAGTTCAGAGGCACTGTAC+AGG 0.534169 8_4:+29866755 None:intergenic
GAAAACTCGTAGTCCACCAT+TGG 0.534975 8_4:+29869360 None:intergenic
GAGATGAAAGATAATAGGAA+TGG 0.535453 8_4:-29869640 Msa1322720:CDS
GCTCACTGACAAGAGCTAAA+GGG 0.535956 8_4:+29867515 None:intergenic
TGTTGGAGTTCCCAATATTG+TGG 0.537381 8_4:+29869513 None:intergenic
TGCCTCTGAACTTGGAACTC+TGG 0.541371 8_4:-29866746 Msa1322720:CDS
GGCACACATTGGAGTTGCCA+TGG 0.542531 8_4:-29868693 Msa1322720:CDS
GTTCATAACTATGATAGCAA+TGG 0.544053 8_4:-29870750 Msa1322720:CDS
TCATGTTGTAATTTCATAAG+GGG 0.544061 8_4:-29866404 Msa1322720:three_prime_UTR
ATGGATATCTGGAGAAGTTG+TGG 0.545213 8_4:-29869662 Msa1322720:CDS
GTACAGAGGCGGTGAGCCGT+TGG 0.545845 8_4:-29871472 Msa1322720:CDS
GGGGATCAAGTACCTGCTGA+TGG 0.546301 8_4:-29870276 Msa1322720:CDS
TGTTCCAGAAGGTTTACCAT+TGG 0.546447 8_4:-29869842 Msa1322720:CDS
TGTGCTAGCTATGGTTGTGC+AGG 0.550993 8_4:+29866615 None:intergenic
AACCAAAGTGATAGATGGGT+CGG 0.551546 8_4:-29870151 Msa1322720:CDS
TGAAGAGGCCTCCAGTTGGA+AGG 0.551685 8_4:-29867474 Msa1322720:CDS
CAAGATCGACATTCTTCGCA+TGG 0.552524 8_4:+29869254 None:intergenic
CAGTTAAGGTCACACGAGAT+GGG 0.552624 8_4:-29870359 Msa1322720:CDS
GAAAAGTTTAACAAATGATA+GGG 0.552935 8_4:-29869791 Msa1322720:CDS
GTTCAAACTTGTATAGCAGC+AGG 0.552990 8_4:-29869073 Msa1322720:CDS
AGGAATGGAAATAAACTGAA+AGG 0.555817 8_4:-29869625 Msa1322720:CDS
CTCCATTGTAGCTTATCTGA+AGG 0.557183 8_4:-29868780 Msa1322720:CDS
CCAAAGATGAATATGATATG+TGG 0.557659 8_4:+29866528 None:intergenic
ATAGTCATTGCTGTTCCAGA+AGG 0.561808 8_4:-29869853 Msa1322720:CDS
GCACACATTGGAGTTGCCAT+GGG 0.563678 8_4:-29868692 Msa1322720:CDS
GATGAGGTGGGTATTATACT+TGG 0.565203 8_4:-29870471 Msa1322720:CDS
TGACGTCAACGCATTAGAAG+TGG 0.566422 8_4:+29871625 None:intergenic
CATGTTGTAATTTCATAAGG+GGG 0.566790 8_4:-29866403 Msa1322720:three_prime_UTR
AATCATTGAAGTTCTGCGAA+TGG 0.567295 8_4:-29870404 Msa1322720:CDS
GAAGAGGCCTCCAGTTGGAA+GGG 0.567609 8_4:-29867473 Msa1322720:CDS
AAACCCAAAATAGTGTTGCC+GGG 0.567734 8_4:+29870641 None:intergenic
TGATGCCAATATTCTGCGAA+AGG 0.568120 8_4:+29866492 None:intergenic
GTCCTTGTTAGTCTTCCCAA+TGG 0.568576 8_4:-29869376 Msa1322720:CDS
GTGGAAAATTTGCCACTGAA+GGG 0.568868 8_4:-29870512 Msa1322720:CDS
CGGGAACCAAAGTGATAGAT+GGG 0.569519 8_4:-29870155 Msa1322720:CDS
TCGAATTAGTGGATAAGGAT+CGG 0.572348 8_4:-29871496 Msa1322720:CDS
ATCGCCAGTGACCATGGCAA+TGG 0.574928 8_4:+29869045 None:intergenic
ATTTCGGAACTTGTCTACAA+TGG 0.575444 8_4:-29868945 Msa1322720:CDS
GATATGCAAATCCCATCAGC+AGG 0.576215 8_4:+29870264 None:intergenic
CTCTGTGCCTGATAATCCCA+TGG 0.576412 8_4:+29868676 None:intergenic
ATCATGACATAATACAGGTA+AGG 0.576481 8_4:+29866460 None:intergenic
AAAACTCGTAGTCCACCATT+GGG 0.576714 8_4:+29869361 None:intergenic
AATAGTTCTCAAAGGTTCAG+AGG 0.578252 8_4:+29869216 None:intergenic
AAGAGGCCTCCAGTTGGAAG+GGG 0.580347 8_4:-29867472 Msa1322720:CDS
GCGATGATATGAATATAGCT+AGG 0.580986 8_4:-29869027 Msa1322720:CDS
GGGATCAAGTACCTGCTGAT+GGG 0.581925 8_4:-29870275 Msa1322720:CDS
ATGGAGTTGAAGGCATTGCA+AGG 0.582724 8_4:-29870713 Msa1322720:CDS
AGTAAATGTGTATGATGAGG+TGG 0.583365 8_4:-29870484 Msa1322720:CDS
AAAGTATACGAAGGTTATGT+GGG 0.585483 8_4:+29866297 None:intergenic
ATGGTTGTGCAGGAAGTGCC+TGG 0.586165 8_4:+29866625 None:intergenic
TTTCTTGATTTACATAAACT+GGG 0.587025 8_4:+29870193 None:intergenic
CTTGTCTACAATGGATATGG+AGG 0.588012 8_4:-29868936 Msa1322720:CDS
AGGACTATTGCTACAGAATG+TGG 0.588492 8_4:-29869007 Msa1322720:CDS
TTAACGATGAACTTATGAAG+AGG 0.591899 8_4:-29867489 Msa1322720:CDS
CATATCATCGCCAGTGACCA+TGG 0.591987 8_4:+29869039 None:intergenic
CCAAAGTGATAGATGGGTCG+GGG 0.592827 8_4:-29870149 Msa1322720:CDS
TACCTGTATTATGTCATGAT+CGG 0.594440 8_4:-29866457 Msa1322720:three_prime_UTR
TTTCGAGATCCGCTGCAAGT+CGG 0.595762 8_4:+29871408 None:intergenic
GCTAAAGAAATAGTTCTCAA+AGG 0.597281 8_4:+29869208 None:intergenic
GACAGTGACCTCCAATTGCA+TGG 0.597486 8_4:-29869698 Msa1322720:CDS
ATTTACTAGCAACCCTTCAG+TGG 0.605264 8_4:+29870500 None:intergenic
ATCCTTCAGATAAGCTACAA+TGG 0.609602 8_4:+29868778 None:intergenic
TGATGCTCCTGCACTGCATG+AGG 0.610642 8_4:-29868714 Msa1322720:CDS
GATGTAAGTATTCGCCGTGA+CGG 0.610700 8_4:-29866651 Msa1322720:CDS
TGACAAGAGCTAAAGGGCAG+AGG 0.610855 8_4:+29867521 None:intergenic
AGCAGGAGTAACCATTGCCA+TGG 0.610945 8_4:-29869056 Msa1322720:CDS
AACCAGAGTTCCAAGTTCAG+AGG 0.612528 8_4:+29866744 None:intergenic
CTTATGAAGAGGCCTCCAGT+TGG 0.613832 8_4:-29867478 Msa1322720:CDS
AAAAGCAAGGTTAAGTGTCA+CGG 0.614563 8_4:+29869819 None:intergenic
GCACTGCATGAGGCACACAT+TGG 0.614582 8_4:-29868704 Msa1322720:CDS
CCATTACAGGTGAAACTGAA+CGG 0.619108 8_4:-29870042 Msa1322720:CDS
AAGATGCTAGTGGCAGCTGT+TGG 0.620189 8_4:-29870126 Msa1322720:CDS
GGGAAAATAGCCTAAATACC+CGG 0.626879 8_4:-29870659 Msa1322720:CDS
GTCACTGATCTGGAATAACA+TGG 0.628342 8_4:-29871537 Msa1322720:exon
TAGAAGGTTCCGACTTGCAG+CGG 0.628788 8_4:-29871417 Msa1322720:CDS
TATGTTTGGTGAGGTTGTTG+CGG 0.630527 8_4:-29868756 Msa1322720:CDS
TCTGAAGGATATGTTTGGTG+AGG 0.638884 8_4:-29868765 Msa1322720:CDS
CACCATTGGGAAGACTAACA+AGG 0.640019 8_4:+29869374 None:intergenic
GTAAATGTGTATGATGAGGT+GGG 0.640086 8_4:-29870483 Msa1322720:CDS
ATTGTCAATATTATCAAATG+GGG 0.641772 8_4:-29867768 Msa1322720:CDS
CTGTACAGGCAAAATTGCCA+AGG 0.645627 8_4:+29866769 None:intergenic
GGGATTCTTCACCAGCGAGA+CGG 0.646880 8_4:+29871442 None:intergenic
TATTATCAAATGGGGACGTG+CGG 0.647774 8_4:-29867760 Msa1322720:CDS
TTATCACGAATGCCATGTGG+AGG 0.649611 8_4:-29867441 Msa1322720:CDS
TGGAGTGTTTGTCATGTGGT+AGG 0.650498 8_4:+29868798 None:intergenic
ATATTTGCTTAGATAAAACA+GGG 0.651410 8_4:-29869720 Msa1322720:CDS
TTTGGAGATTGAGACTACAC+AGG 0.651846 8_4:-29871560 Msa1322720:five_prime_UTR
GCTAGTAAATGTGTATGATG+AGG 0.652202 8_4:-29870487 Msa1322720:CDS
GAAGTGCCTGGTAACCGTCA+CGG 0.653328 8_4:+29866637 None:intergenic
TCAGTGTATAGCCATTATCA+GGG 0.658211 8_4:+29869146 None:intergenic
TAGTGGCAGCTGTTGGCATG+AGG 0.660093 8_4:-29870119 Msa1322720:CDS
TACAAAACAAAAGTATACGA+AGG 0.662362 8_4:+29866288 None:intergenic
GAACGACGTCTTTGACACCA+AGG 0.678662 8_4:+29869092 None:intergenic
TTGGAGATTGAGACTACACA+GGG 0.679740 8_4:-29871559 Msa1322720:five_prime_UTR
CATGGGATTATCAGGCACAG+AGG 0.681497 8_4:-29868675 Msa1322720:intron
CGTACCAGCAATAGCAATCG+GGG 0.682003 8_4:+29870950 None:intergenic
CTTGTGTATAAAGCAACTCG+CGG 0.683672 8_4:-29869946 Msa1322720:CDS
AAGGAAACTTCGTGTCTCAG+TGG 0.687735 8_4:-29870694 Msa1322720:CDS
TGGGTCGGGGAAGATGCTAG+TGG 0.690747 8_4:-29870136 Msa1322720:CDS
TAAGGATCGGAGTACAGAGG+CGG 0.699403 8_4:-29871483 Msa1322720:CDS
CAAATGATAGGGCACTCGTG+AGG 0.700836 8_4:-29869780 Msa1322720:CDS
AATTTATCACGAATGCCATG+TGG 0.704554 8_4:-29867444 Msa1322720:CDS
GGATAAGGATCGGAGTACAG+AGG 0.706628 8_4:-29871486 Msa1322720:CDS
ACAATGGAGTGTTTGTCATG+TGG 0.709053 8_4:+29868794 None:intergenic
GTTGGCATGAGGACTGAATG+GGG 0.732375 8_4:-29870108 Msa1322720:CDS
GAAATGGTTAAGGATAAACA+AGG 0.742289 8_4:-29869541 Msa1322720:CDS
ACTGATCTGGAATAACATGG+AGG 0.750860 8_4:-29871534 Msa1322720:exon
AGTGACCTCCAATTGCATGG+TGG 0.754752 8_4:-29869695 Msa1322720:CDS
GCAAGTCGGAACCTTCTACG+GGG 0.776337 8_4:+29871422 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAGATAGAAATTAGAT+TGG + chr8_4:29866611-29866630 None:intergenic 15.0%
!! AATGGTTTCAAAAAAATTAA+TGG - chr8_4:29867184-29867203 Msa1322720:intron 15.0%
!! TAAAAGTAAAAACTATAGTA+TGG + chr8_4:29869811-29869830 None:intergenic 15.0%
!! ATATGAATATAAACTAAATC+TGG + chr8_4:29869932-29869951 None:intergenic 15.0%
!!! AAATGCTGATATAATTTTAA+TGG - chr8_4:29870108-29870127 Msa1322720:CDS 15.0%
!! TATTGTCAATATTATCAAAT+GGG - chr8_4:29870147-29870166 Msa1322720:CDS 15.0%
!! AGATAGAAAACGAAAAATTA+TGG - chr8_4:29866716-29866735 Msa1322720:CDS 20.0%
!! GATAGAAAACGAAAAATTAT+GGG - chr8_4:29866717-29866736 Msa1322720:CDS 20.0%
!! CATTAATCAAATGATCAAAT+TGG + chr8_4:29866872-29866891 None:intergenic 20.0%
!!! TTTTCCTGTATTTGTTTATA+AGG + chr8_4:29866902-29866921 None:intergenic 20.0%
!! AAAAAAATTAATGGAGTTGA+AGG - chr8_4:29867193-29867212 Msa1322720:intron 20.0%
!!! AACCTTTTATTAAATTTGTG+TGG - chr8_4:29867323-29867342 Msa1322720:CDS 20.0%
!!! ACCTTTTATTAAATTTGTGT+GGG - chr8_4:29867324-29867343 Msa1322720:CDS 20.0%
!! TTTCTTGATTTACATAAACT+GGG + chr8_4:29867726-29867745 None:intergenic 20.0%
!!! TTTTCTTGATTTACATAAAC+TGG + chr8_4:29867727-29867746 None:intergenic 20.0%
!! GAAAAGTTTAACAAATGATA+GGG - chr8_4:29868125-29868144 Msa1322720:intron 20.0%
!! TTTATCTAAGCAAATATAAC+TGG + chr8_4:29868193-29868212 None:intergenic 20.0%
!! TATATTTGCTTAGATAAAAC+AGG - chr8_4:29868195-29868214 Msa1322720:intron 20.0%
!! ATATTTGCTTAGATAAAACA+GGG - chr8_4:29868196-29868215 Msa1322720:intron 20.0%
!! AACTGAGGATTATTATAATT+TGG + chr8_4:29869315-29869334 None:intergenic 20.0%
!!! GTTTTTACTTTTATAGTTCA+CGG - chr8_4:29869818-29869837 Msa1322720:CDS 20.0%
!!! TTTTTACTTTTATAGTTCAC+GGG - chr8_4:29869819-29869838 Msa1322720:CDS 20.0%
!! ATATTCATATTCATATCCAA+TGG - chr8_4:29869942-29869961 Msa1322720:CDS 20.0%
!!! AGCAGAAATGTTTTTTTTAT+AGG + chr8_4:29870043-29870062 None:intergenic 20.0%
!!! AATTATATCAGCATTTTCTT+TGG + chr8_4:29870104-29870123 None:intergenic 20.0%
!! CTATTGTCAATATTATCAAA+TGG - chr8_4:29870146-29870165 Msa1322720:CDS 20.0%
!! ATTGTCAATATTATCAAATG+GGG - chr8_4:29870148-29870167 Msa1322720:CDS 20.0%
!!! TTATGGTTCTTAATTTTCAA+GGG - chr8_4:29870535-29870554 Msa1322720:CDS 20.0%
!! TAAGCTAAAATCAAAATTCA+TGG + chr8_4:29870672-29870691 None:intergenic 20.0%
!!! TTTTTTACATTGTTGATGAA+TGG + chr8_4:29870726-29870745 None:intergenic 20.0%
!!! TGTAAAAAAGTTTTAACTAG+AGG - chr8_4:29870737-29870756 Msa1322720:CDS 20.0%
!! GAGTAATTAAAAATCAGAAT+AGG + chr8_4:29870966-29870985 None:intergenic 20.0%
!!! TGGTTAATTAGTGTTTTAAT+TGG - chr8_4:29871190-29871209 Msa1322720:intron 20.0%
!!! TACTTACATCTTTTTCAATT+GGG + chr8_4:29871255-29871274 None:intergenic 20.0%
!!! ATACTTACATCTTTTTCAAT+TGG + chr8_4:29871256-29871275 None:intergenic 20.0%
!! CAAAAGAAAAAAAAAGTTCA+GGG + chr8_4:29871350-29871369 None:intergenic 20.0%
!! ACAAAAGAAAAAAAAAGTTC+AGG + chr8_4:29871351-29871370 None:intergenic 20.0%
!!! TTTGATTCAACAAGTTTTAA+AGG - chr8_4:29871588-29871607 Msa1322720:five_prime_UTR 20.0%
! TCAACTTTCATTCAATATCA+TGG + chr8_4:29866324-29866343 None:intergenic 25.0%
! ATAGGAAAACAACATACTAT+AGG + chr8_4:29866653-29866672 None:intergenic 25.0%
! GATAATATTAGCATTGCATT+TGG + chr8_4:29866806-29866825 None:intergenic 25.0%
! TCCCACACAAATTTAATAAA+AGG + chr8_4:29867328-29867347 None:intergenic 25.0%
!!! GTTTGTTCCATAGTTTTAAT+AGG - chr8_4:29867382-29867401 Msa1322720:CDS 25.0%
!! TTTTCCACCTATTAAAACTA+TGG + chr8_4:29867392-29867411 None:intergenic 25.0%
!!! TATACTTGGTGTATTCTTTT+TGG - chr8_4:29867459-29867478 Msa1322720:CDS 25.0%
! ACATTGTTCATTTGTCAATT+GGG - chr8_4:29867620-29867639 Msa1322720:intron 25.0%
! CGAAAAGTTTAACAAATGAT+AGG - chr8_4:29868124-29868143 Msa1322720:intron 25.0%
! TTGTTTATCCTTAACCATTT+CGG + chr8_4:29868376-29868395 None:intergenic 25.0%
! TCTTAAGTTTCCTATACAAT+TGG + chr8_4:29868485-29868504 None:intergenic 25.0%
! ATCTTGTAAACAGGATTAAA+AGG + chr8_4:29868513-29868532 None:intergenic 25.0%
! TTCAATGGTTAAACCATTAT+TGG + chr8_4:29868943-29868962 None:intergenic 25.0%
! AATAATGGTTTAACCATTGA+AGG - chr8_4:29868942-29868961 Msa1322720:CDS 25.0%
!! GATATTAGAACCTGAATTTT+TGG + chr8_4:29869014-29869033 None:intergenic 25.0%
! GAAACAAACATTTCAAATAG+AGG + chr8_4:29869059-29869078 None:intergenic 25.0%
! TATTGAACACAAATTTAGAG+AGG - chr8_4:29869404-29869423 Msa1322720:CDS 25.0%
! AATAGTAGATCTGAATTTGT+AGG - chr8_4:29869492-29869511 Msa1322720:CDS 25.0%
!! TTGGATAGTGGTTATAAAAA+AGG - chr8_4:29869696-29869715 Msa1322720:CDS 25.0%
!!! AGGTTTGTTAGTATAACATT+TGG - chr8_4:29870267-29870286 Msa1322720:CDS 25.0%
! ATTTGGTTATCATCTATTCA+AGG - chr8_4:29870284-29870303 Msa1322720:CDS 25.0%
! TTTGGTTATCATCTATTCAA+GGG - chr8_4:29870285-29870304 Msa1322720:CDS 25.0%
! CAATAACTTGATATATGCTT+TGG + chr8_4:29870512-29870531 None:intergenic 25.0%
! ATATCAAGTTATTGTCCTTA+TGG - chr8_4:29870518-29870537 Msa1322720:CDS 25.0%
! CTTGAAAATTAAGAACCATA+AGG + chr8_4:29870536-29870555 None:intergenic 25.0%
!! CTTATGGTTCTTAATTTTCA+AGG - chr8_4:29870534-29870553 Msa1322720:CDS 25.0%
! AAGAATATACTTGGTATAAG+TGG - chr8_4:29870558-29870577 Msa1322720:CDS 25.0%
!!! CAACTCCTTTATATTTTTTC+AGG - chr8_4:29870617-29870636 Msa1322720:CDS 25.0%
! CTGTACCTGAAAAAATATAA+AGG + chr8_4:29870625-29870644 None:intergenic 25.0%
! TGTAACAAAATGATACCATT+GGG + chr8_4:29870775-29870794 None:intergenic 25.0%
! ATGTAACAAAATGATACCAT+TGG + chr8_4:29870776-29870795 None:intergenic 25.0%
! TCTCATGTTGTAATTTCATA+AGG - chr8_4:29871510-29871529 Msa1322720:CDS 25.0%
! CTCATGTTGTAATTTCATAA+GGG - chr8_4:29871511-29871530 Msa1322720:CDS 25.0%
! TCATGTTGTAATTTCATAAG+GGG - chr8_4:29871512-29871531 Msa1322720:CDS 25.0%
!! TACAAAACAAAAGTATACGA+AGG + chr8_4:29871631-29871650 None:intergenic 25.0%
AGTTGAAAGAAAAGTCAGTT+TGG - chr8_4:29866338-29866357 Msa1322720:three_prime_UTR 30.0%
!! AACCTGCTTTTCTTGTAATA+GGG + chr8_4:29866540-29866559 None:intergenic 30.0%
!! AAACCTGCTTTTCTTGTAAT+AGG + chr8_4:29866541-29866560 None:intergenic 30.0%
GAAAACAACATACTATAGGA+AGG + chr8_4:29866739-29866758 None:intergenic 30.0%
ATGGGAAAACAACATACTAT+AGG - chr8_4:29866735-29866754 Msa1322720:CDS 30.0%
GAAAACAACATACTATAGGA+AGG - chr8_4:29866739-29866758 Msa1322720:CDS 30.0%
ATTGCATTTGGAAATGTCAT+TGG + chr8_4:29866794-29866813 None:intergenic 30.0%
CCTGTATTTGTTTATAAGGA+AGG + chr8_4:29866898-29866917 None:intergenic 30.0%
CCTTCCTTATAAACAAATAC+AGG - chr8_4:29866895-29866914 Msa1322720:CDS 30.0%
AACAAATACAGGAAAAGCTT+CGG - chr8_4:29866906-29866925 Msa1322720:intron 30.0%
!!! TTTTGAGTTCAACTGACTTT+TGG - chr8_4:29867072-29867091 Msa1322720:intron 30.0%
GTTCATAACTATGATAGCAA+TGG - chr8_4:29867166-29867185 Msa1322720:intron 30.0%
!! CTCAACACTCATTTTTCTTA+TGG - chr8_4:29867360-29867379 Msa1322720:CDS 30.0%
!!! TGTTCCATAGTTTTAATAGG+TGG - chr8_4:29867385-29867404 Msa1322720:CDS 30.0%
GAACAAGAACATTTCAGTTA+AGG - chr8_4:29867543-29867562 Msa1322720:CDS 30.0%
GACATTGTTCATTTGTCAAT+TGG - chr8_4:29867619-29867638 Msa1322720:intron 30.0%
CATTGTTCATTTGTCAATTG+GGG - chr8_4:29867621-29867640 Msa1322720:intron 30.0%
! AGAAAACCCTTTTCTACTTT+CGG - chr8_4:29867741-29867760 Msa1322720:CDS 30.0%
!!! TAGAAGTTTTGAATGACGTA+GGG - chr8_4:29867839-29867858 Msa1322720:intron 30.0%
GTCAATAAACTATGGATATC+TGG - chr8_4:29868243-29868262 Msa1322720:intron 30.0%
TTGTGGAGATGAAAGATAAT+AGG - chr8_4:29868271-29868290 Msa1322720:intron 30.0%
GAGATGAAAGATAATAGGAA+TGG - chr8_4:29868276-29868295 Msa1322720:intron 30.0%
AGGAATGGAAATAAACTGAA+AGG - chr8_4:29868291-29868310 Msa1322720:intron 30.0%
GAAATGGTTAAGGATAAACA+AGG - chr8_4:29868375-29868394 Msa1322720:intron 30.0%
ACAAGGAAAAACCACAATAT+TGG - chr8_4:29868392-29868411 Msa1322720:intron 30.0%
CAAGGAAAAACCACAATATT+GGG - chr8_4:29868393-29868412 Msa1322720:intron 30.0%
GCTAAAGAAATAGTTCTCAA+AGG + chr8_4:29868711-29868730 None:intergenic 30.0%
!!! TAGAACCTGAATTTTTGGTA+TGG + chr8_4:29869009-29869028 None:intergenic 30.0%
TACATGCTTAATATTGATGC+AGG - chr8_4:29869082-29869101 Msa1322720:CDS 30.0%
!! GAATAGTTAGCTTGCTTTAT+AGG + chr8_4:29869527-29869546 None:intergenic 30.0%
TTATAACCACTATCCAATGT+TGG + chr8_4:29869693-29869712 None:intergenic 30.0%
!!! CACATTAGTTTTTAGCATGA+AGG + chr8_4:29870018-29870037 None:intergenic 30.0%
TTCATAAGTTCATCGTTAAG+TGG + chr8_4:29870426-29870445 None:intergenic 30.0%
TTAACGATGAACTTATGAAG+AGG - chr8_4:29870427-29870446 Msa1322720:CDS 30.0%
TTTCAAGGGAAGAATATACT+TGG - chr8_4:29870549-29870568 Msa1322720:CDS 30.0%
TTCCACAAATATCTACTACA+TGG - chr8_4:29870810-29870829 Msa1322720:CDS 30.0%
AGTTTATCTCATTGAATACC+TGG + chr8_4:29871021-29871040 None:intergenic 30.0%
! GAGAAGATAAACATTTTCAG+AGG - chr8_4:29871052-29871071 Msa1322720:intron 30.0%
CCAAAGATGAATATGATATG+TGG + chr8_4:29871391-29871410 None:intergenic 30.0%
CCACATATCATATTCATCTT+TGG - chr8_4:29871388-29871407 Msa1322720:CDS 30.0%
ATCATGACATAATACAGGTA+AGG + chr8_4:29871459-29871478 None:intergenic 30.0%
TACCTGTATTATGTCATGAT+CGG - chr8_4:29871459-29871478 Msa1322720:CDS 30.0%
CATGTTGTAATTTCATAAGG+GGG - chr8_4:29871513-29871532 Msa1322720:CDS 30.0%
AAAGTATACGAAGGTTATGT+GGG + chr8_4:29871622-29871641 None:intergenic 30.0%
! AAAAGTATACGAAGGTTATG+TGG + chr8_4:29871623-29871642 None:intergenic 30.0%
GAATAACATGGAGGAATTTC+TGG - chr8_4:29866391-29866410 Msa1322720:three_prime_UTR 35.0%
! AGACTTCGAATTAGTGGATA+AGG - chr8_4:29866415-29866434 Msa1322720:three_prime_UTR 35.0%
! TCGAATTAGTGGATAAGGAT+CGG - chr8_4:29866420-29866439 Msa1322720:three_prime_UTR 35.0%
ACAAACTTGTGCTAATCCAT+CGG + chr8_4:29866681-29866700 None:intergenic 35.0%
! CTATCTTTGAAAGATTGTGC+AGG + chr8_4:29866828-29866847 None:intergenic 35.0%
ACAAATACAGGAAAAGCTTC+GGG - chr8_4:29866907-29866926 Msa1322720:intron 35.0%
ACATGCACTTCAACATAATC+AGG + chr8_4:29867106-29867125 None:intergenic 35.0%
TATGTTGAAGTGCATGTTGA+TGG - chr8_4:29867109-29867128 Msa1322720:intron 35.0%
ACAAGAGATGCAATTGAATC+TGG + chr8_4:29867148-29867167 None:intergenic 35.0%
TAAACCCAAAATAGTGTTGC+CGG + chr8_4:29867279-29867298 None:intergenic 35.0%
GCTAGTAAATGTGTATGATG+AGG - chr8_4:29867429-29867448 Msa1322720:CDS 35.0%
AGTAAATGTGTATGATGAGG+TGG - chr8_4:29867432-29867451 Msa1322720:CDS 35.0%
GTAAATGTGTATGATGAGGT+GGG - chr8_4:29867433-29867452 Msa1322720:CDS 35.0%
!! CTTTTTGGTCGTCTTTACAT+CGG - chr8_4:29867474-29867493 Msa1322720:CDS 35.0%
AATCATTGAAGTTCTGCGAA+TGG - chr8_4:29867512-29867531 Msa1322720:CDS 35.0%
ATCATTGAAGTTCTGCGAAT+GGG - chr8_4:29867513-29867532 Msa1322720:CDS 35.0%
TCGATTTATGATCTCGTAGT+AGG - chr8_4:29867595-29867614 Msa1322720:intron 35.0%
ATCGACGAATCAAGTTTAAC+TGG - chr8_4:29867691-29867710 Msa1322720:CDS 35.0%
! GAAAACCCTTTTCTACTTTC+GGG - chr8_4:29867742-29867761 Msa1322720:CDS 35.0%
!!! GTAGAAGTTTTGAATGACGT+AGG - chr8_4:29867838-29867857 Msa1322720:intron 35.0%
!!! AGAAGTTTTGAATGACGTAG+GGG - chr8_4:29867840-29867859 Msa1322720:intron 35.0%
! GCTACTATTGTTGGTAAGAT+TGG - chr8_4:29867901-29867920 Msa1322720:intron 35.0%
TCTTCTTACATTAGCTGTGT+TGG - chr8_4:29867936-29867955 Msa1322720:intron 35.0%
AAAAGCAAGGTTAAGTGTCA+CGG + chr8_4:29868100-29868119 None:intergenic 35.0%
! AACTTTTCGTTGCAAAAGCA+AGG + chr8_4:29868113-29868132 None:intergenic 35.0%
TTTATTGACCACCATGCAAT+TGG + chr8_4:29868232-29868251 None:intergenic 35.0%
!!! AGTTCTGAACATACTTTTGC+AGG - chr8_4:29868329-29868348 Msa1322720:intron 35.0%
!!! CCATTTCGGAAGCATTATTT+TGG + chr8_4:29868362-29868381 None:intergenic 35.0%
CCAAAATAATGCTTCCGAAA+TGG - chr8_4:29868359-29868378 Msa1322720:intron 35.0%
TAATGCTTCCGAAATGGTTA+AGG - chr8_4:29868365-29868384 Msa1322720:intron 35.0%
GATTCAGCATTGTTGGAATT+TGG - chr8_4:29868426-29868445 Msa1322720:intron 35.0%
ATGTCCAATGCCAATTGTAT+AGG - chr8_4:29868472-29868491 Msa1322720:intron 35.0%
GTTTCCTATACAATTGGCAT+TGG + chr8_4:29868479-29868498 None:intergenic 35.0%
ACTGTCATCATCTTGTAAAC+AGG + chr8_4:29868522-29868541 None:intergenic 35.0%
! GAAAAAATCATCGACTGCAA+TGG - chr8_4:29868615-29868634 Msa1322720:intron 35.0%
AATAGTTCTCAAAGGTTCAG+AGG + chr8_4:29868703-29868722 None:intergenic 35.0%
GAAAACAACATCCCTGATAA+TGG - chr8_4:29868759-29868778 Msa1322720:CDS 35.0%
TCAGTGTATAGCCATTATCA+GGG + chr8_4:29868773-29868792 None:intergenic 35.0%
ATCAGTGTATAGCCATTATC+AGG + chr8_4:29868774-29868793 None:intergenic 35.0%
TATACACTGATAGCCATTCT+AGG - chr8_4:29868783-29868802 Msa1322720:CDS 35.0%
!! AGGATCATTGATTCCTAGAA+TGG + chr8_4:29868799-29868818 None:intergenic 35.0%
GCGATGATATGAATATAGCT+AGG - chr8_4:29868889-29868908 Msa1322720:intron 35.0%
TGTGGTATACTCACCAATAA+TGG - chr8_4:29868927-29868946 Msa1322720:CDS 35.0%
CCATTGAAGGACAACAATTT+CGG - chr8_4:29868955-29868974 Msa1322720:CDS 35.0%
ATTTCGGAACTTGTCTACAA+TGG - chr8_4:29868971-29868990 Msa1322720:CDS 35.0%
GAACTTGTCTACAATGGATA+TGG - chr8_4:29868977-29868996 Msa1322720:CDS 35.0%
GGTTACCATACCAAAAATTC+AGG - chr8_4:29869001-29869020 Msa1322720:CDS 35.0%
CTTAATATTGATGCAGGTGA+TGG - chr8_4:29869088-29869107 Msa1322720:CDS 35.0%
ATCCTTCAGATAAGCTACAA+TGG + chr8_4:29869141-29869160 None:intergenic 35.0%
GCTTATCTGAAGGATATGTT+TGG - chr8_4:29869146-29869165 Msa1322720:CDS 35.0%
GAAGAAACAGAACAAAACTG+AGG + chr8_4:29869330-29869349 None:intergenic 35.0%
GTTGCTAGTTGTTTAGTTAG+TGG + chr8_4:29869579-29869598 None:intergenic 35.0%
ATGGTTTGACTGCATATAGA+AGG + chr8_4:29869792-29869811 None:intergenic 35.0%
AACACGACGATCTTTAATCT+TGG - chr8_4:29869873-29869892 Msa1322720:CDS 35.0%
AGAAGACTTAGTTATGTAGG+AGG + chr8_4:29869995-29870014 None:intergenic 35.0%
AGGAGAAGACTTAGTTATGT+AGG + chr8_4:29869998-29870017 None:intergenic 35.0%
!! TCTGCTTGCTGAATGTTTTA+TGG - chr8_4:29870057-29870076 Msa1322720:CDS 35.0%
!! TTTATTTCTGCTTCTGTCAC+AGG - chr8_4:29870247-29870266 Msa1322720:CDS 35.0%
GAATAGCTTTCTTCACTTTC+AGG - chr8_4:29870318-29870337 Msa1322720:CDS 35.0%
AATTTATCACGAATGCCATG+TGG - chr8_4:29870472-29870491 Msa1322720:CDS 35.0%
AGGTCAATCATATTTCCCAA+TGG - chr8_4:29870757-29870776 Msa1322720:CDS 35.0%
CACCATGTAGTAGATATTTG+TGG + chr8_4:29870815-29870834 None:intergenic 35.0%
GAGGAGATCGTAAATAATTG+TGG + chr8_4:29870881-29870900 None:intergenic 35.0%
AATACCTGGCAGTAGAAATA+AGG + chr8_4:29871007-29871026 None:intergenic 35.0%
! TTTAAACAGCTGGGCATTTT+CGG - chr8_4:29871078-29871097 Msa1322720:intron 35.0%
CACACAATTCAGGAAGAATA+TGG - chr8_4:29871320-29871339 Msa1322720:intron 35.0%
AGTTTCCTTTCGCAGAATAT+TGG - chr8_4:29871419-29871438 Msa1322720:CDS 35.0%
AATTTCATAAGGGGGTTATG+TGG - chr8_4:29871521-29871540 Msa1322720:CDS 35.0%
TTTGGAGATTGAGACTACAC+AGG - chr8_4:29866356-29866375 Msa1322720:three_prime_UTR 40.0%
TTGGAGATTGAGACTACACA+GGG - chr8_4:29866357-29866376 Msa1322720:three_prime_UTR 40.0%
! GTCACTGATCTGGAATAACA+TGG - chr8_4:29866379-29866398 Msa1322720:three_prime_UTR 40.0%
! ACTGATCTGGAATAACATGG+AGG - chr8_4:29866382-29866401 Msa1322720:three_prime_UTR 40.0%
TCTGGAAGACTTCGAATTAG+TGG - chr8_4:29866409-29866428 Msa1322720:three_prime_UTR 40.0%
TGCCCTATTACAAGAAAAGC+AGG - chr8_4:29866535-29866554 Msa1322720:three_prime_UTR 40.0%
! TGTTTTCCTATAGTGACCGA+TGG - chr8_4:29866662-29866681 Msa1322720:CDS 40.0%
GGGAAAATAGCCTAAATACC+CGG - chr8_4:29867257-29867276 Msa1322720:intron 40.0%
AATAGTGTTGCCGGGTATTT+AGG + chr8_4:29867270-29867289 None:intergenic 40.0%
! AATACCCGGCAACACTATTT+TGG - chr8_4:29867271-29867290 Msa1322720:intron 40.0%
! ATACCCGGCAACACTATTTT+GGG - chr8_4:29867272-29867291 Msa1322720:intron 40.0%
AAACCCAAAATAGTGTTGCC+GGG + chr8_4:29867278-29867297 None:intergenic 40.0%
! TCGCATGTTTTTCTGCATAG+CGG + chr8_4:29867303-29867322 None:intergenic 40.0%
GTGGAAAATTTGCCACTGAA+GGG - chr8_4:29867404-29867423 Msa1322720:CDS 40.0%
ATTTACTAGCAACCCTTCAG+TGG + chr8_4:29867419-29867438 None:intergenic 40.0%
GATGAGGTGGGTATTATACT+TGG - chr8_4:29867445-29867464 Msa1322720:CDS 40.0%
CGCAGAACTTCAATGATTGA+TGG + chr8_4:29867510-29867529 None:intergenic 40.0%
CGAATCAAGTTTAACTGGTC+AGG - chr8_4:29867696-29867715 Msa1322720:CDS 40.0%
TGGTTCCCGAAAGTAGAAAA+GGG + chr8_4:29867750-29867769 None:intergenic 40.0%
TTGGTTCCCGAAAGTAGAAA+AGG + chr8_4:29867751-29867770 None:intergenic 40.0%
AACCAAAGTGATAGATGGGT+CGG - chr8_4:29867765-29867784 Msa1322720:CDS 40.0%
CCATTACAGGTGAAACTGAA+CGG - chr8_4:29867874-29867893 Msa1322720:intron 40.0%
AACGGAGTTGCTACTATTGT+TGG - chr8_4:29867892-29867911 Msa1322720:intron 40.0%
CTTGTGTATAAAGCAACTCG+CGG - chr8_4:29867970-29867989 Msa1322720:intron 40.0%
! CTCGCGGAGATTTTACTAAT+TGG - chr8_4:29867986-29868005 Msa1322720:intron 40.0%
! CAGCTTCATAGCATCTTTTG+AGG + chr8_4:29868013-29868032 None:intergenic 40.0%
! ATAGTCATTGCTGTTCCAGA+AGG - chr8_4:29868063-29868082 Msa1322720:intron 40.0%
TGTTCCAGAAGGTTTACCAT+TGG - chr8_4:29868074-29868093 Msa1322720:intron 40.0%
TCTTTCTGCATGTGAAGCAA+TGG - chr8_4:29868161-29868180 Msa1322720:intron 40.0%
CTTTCTGCATGTGAAGCAAT+GGG - chr8_4:29868162-29868181 Msa1322720:intron 40.0%
GCATGGTGGTCAATAAACTA+TGG - chr8_4:29868235-29868254 Msa1322720:intron 40.0%
ATGGATATCTGGAGAAGTTG+TGG - chr8_4:29868254-29868273 Msa1322720:intron 40.0%
TGTTGGAGTTCCCAATATTG+TGG + chr8_4:29868406-29868425 None:intergenic 40.0%
TCCAACAGATTCAGCATTGT+TGG - chr8_4:29868419-29868438 Msa1322720:intron 40.0%
TCCAACAATGCTGAATCTGT+TGG + chr8_4:29868423-29868442 None:intergenic 40.0%
!! TTGGAATTTGGCTTGCTGTT+GGG - chr8_4:29868438-29868457 Msa1322720:intron 40.0%
AAAACTCGTAGTCCACCATT+GGG + chr8_4:29868558-29868577 None:intergenic 40.0%
! GGACTACGAGTTTTCTGTAA+AGG - chr8_4:29868564-29868583 Msa1322720:intron 40.0%
! CATTCTTCGCATGGTTTTCA+AGG + chr8_4:29868656-29868675 None:intergenic 40.0%
!!! CAGGGATGTTGTTTTCAGTA+GGG + chr8_4:29868755-29868774 None:intergenic 40.0%
!!! TCAGGGATGTTGTTTTCAGT+AGG + chr8_4:29868756-29868775 None:intergenic 40.0%
ATCAATGATCCTATACGCCT+TGG - chr8_4:29868807-29868826 Msa1322720:CDS 40.0%
GTTCAAACTTGTATAGCAGC+AGG - chr8_4:29868843-29868862 Msa1322720:intron 40.0%
AGGACTATTGCTACAGAATG+TGG - chr8_4:29868909-29868928 Msa1322720:intron 40.0%
CCGAAATTGTTGTCCTTCAA+TGG + chr8_4:29868958-29868977 None:intergenic 40.0%
CTTGTCTACAATGGATATGG+AGG - chr8_4:29868980-29868999 Msa1322720:CDS 40.0%
! ACAATGGAGTGTTTGTCATG+TGG + chr8_4:29869125-29869144 None:intergenic 40.0%
CTCCATTGTAGCTTATCTGA+AGG - chr8_4:29869136-29869155 Msa1322720:CDS 40.0%
! TCTGAAGGATATGTTTGGTG+AGG - chr8_4:29869151-29869170 Msa1322720:CDS 40.0%
! TATGTTTGGTGAGGTTGTTG+CGG - chr8_4:29869160-29869179 Msa1322720:CDS 40.0%
TTCAAGAGATGCTACGAGTT+TGG - chr8_4:29869347-29869366 Msa1322720:CDS 40.0%
GACATCCTTTACCTTAAAGC+CGG - chr8_4:29869718-29869737 Msa1322720:CDS 40.0%
TTGACTGCATATAGAAGGAC+CGG + chr8_4:29869787-29869806 None:intergenic 40.0%
GATACTGAACTACCTTACGA+AGG + chr8_4:29869910-29869929 None:intergenic 40.0%
! CCAATGGTAAAAGCCTTGTA+CGG - chr8_4:29869958-29869977 Msa1322720:CDS 40.0%
GACTTAGTTATGTAGGAGGT+AGG + chr8_4:29869991-29870010 None:intergenic 40.0%
TATTATCAAATGGGGACGTG+CGG - chr8_4:29870156-29870175 Msa1322720:CDS 40.0%
AACAGCCATTATTGTTGCTC+TGG - chr8_4:29870216-29870235 Msa1322720:CDS 40.0%
GATCACCAGAGCAACAATAA+TGG + chr8_4:29870224-29870243 None:intergenic 40.0%
! GCTTTGGGTCAACTTGATTA+TGG - chr8_4:29870368-29870387 Msa1322720:CDS 40.0%
! AATTTTTCTCCCCTTCCAAC+TGG + chr8_4:29870456-29870475 None:intergenic 40.0%
! GCCATGTGGAGGAATATTTT+TGG - chr8_4:29870486-29870505 Msa1322720:CDS 40.0%
GCCAAAAATATTCCTCCACA+TGG + chr8_4:29870490-29870509 None:intergenic 40.0%
TTCATGACAGTTTCAGTACG+AGG + chr8_4:29870900-29870919 None:intergenic 40.0%
GGCAGTAGAAATAAGGCAAA+TGG + chr8_4:29871000-29871019 None:intergenic 40.0%
!! TTTGCCTTATTTCTACTGCC+AGG - chr8_4:29871000-29871019 Msa1322720:CDS 40.0%
!!! TCAGAGGCATTTTAAACAGC+TGG - chr8_4:29871068-29871087 Msa1322720:intron 40.0%
!!! CAGAGGCATTTTAAACAGCT+GGG - chr8_4:29871069-29871088 Msa1322720:intron 40.0%
GTAATCATTGTGCAGTTCCT+TGG - chr8_4:29871130-29871149 Msa1322720:intron 40.0%
TGATGCCAATATTCTGCGAA+AGG + chr8_4:29871427-29871446 None:intergenic 40.0%
CACCGATCATGACATAATAC+AGG + chr8_4:29871464-29871483 None:intergenic 40.0%
TGACGTCAACGCATTAGAAG+TGG + chr8_4:29866294-29866313 None:intergenic 45.0%
GCTAATCCATCGGTCACTAT+AGG + chr8_4:29866671-29866690 None:intergenic 45.0%
ACCGTACCAGCAATAGCAAT+CGG + chr8_4:29866971-29866990 None:intergenic 45.0%
!! ATGGAGTTGAAGGCATTGCA+AGG - chr8_4:29867203-29867222 Msa1322720:intron 45.0%
AAGGAAACTTCGTGTCTCAG+TGG - chr8_4:29867222-29867241 Msa1322720:intron 45.0%
GGTGGAAAATTTGCCACTGA+AGG - chr8_4:29867403-29867422 Msa1322720:CDS 45.0%
TCAGTTAAGGTCACACGAGA+TGG - chr8_4:29867556-29867575 Msa1322720:CDS 45.0%
CAGTTAAGGTCACACGAGAT+GGG - chr8_4:29867557-29867576 Msa1322720:CDS 45.0%
GATATGCAAATCCCATCAGC+AGG + chr8_4:29867655-29867674 None:intergenic 45.0%
GCTGATGGGATTTGCATATC+AGG - chr8_4:29867655-29867674 Msa1322720:intron 45.0%
TCGGGAACCAAAGTGATAGA+TGG - chr8_4:29867760-29867779 Msa1322720:CDS 45.0%
CGGGAACCAAAGTGATAGAT+GGG - chr8_4:29867761-29867780 Msa1322720:CDS 45.0%
ACCAAAGTGATAGATGGGTC+GGG - chr8_4:29867766-29867785 Msa1322720:CDS 45.0%
TGTTGGCATGAGGACTGAAT+GGG - chr8_4:29867807-29867826 Msa1322720:CDS 45.0%
!!! AGTTTTGAATGACGTAGGGG+TGG - chr8_4:29867843-29867862 Msa1322720:intron 45.0%
CCGTTCAGTTTCACCTGTAA+TGG + chr8_4:29867877-29867896 None:intergenic 45.0%
ATTGACCACCATGCAATTGG+AGG + chr8_4:29868229-29868248 None:intergenic 45.0%
!! GTTGGAATTTGGCTTGCTGT+TGG - chr8_4:29868437-29868456 Msa1322720:intron 45.0%
!! TGGAATTTGGCTTGCTGTTG+GGG - chr8_4:29868439-29868458 Msa1322720:intron 45.0%
!! GTCCTTGTTAGTCTTCCCAA+TGG - chr8_4:29868540-29868559 Msa1322720:intron 45.0%
CACCATTGGGAAGACTAACA+AGG + chr8_4:29868545-29868564 None:intergenic 45.0%
!! CTTGTTAGTCTTCCCAATGG+TGG - chr8_4:29868543-29868562 Msa1322720:intron 45.0%
GAAAACTCGTAGTCCACCAT+TGG + chr8_4:29868559-29868578 None:intergenic 45.0%
CAAGATCGACATTCTTCGCA+TGG + chr8_4:29868665-29868684 None:intergenic 45.0%
TCTTTGACACCAAGGCGTAT+AGG + chr8_4:29868819-29868838 None:intergenic 45.0%
! TGGAGTGTTTGTCATGTGGT+AGG + chr8_4:29869121-29869140 None:intergenic 45.0%
CTTCGCAGCTAAGTTCTTGT+TGG + chr8_4:29869658-29869677 None:intergenic 45.0%
! GATTGTCGAGTTGCCAACAT+TGG - chr8_4:29869677-29869696 Msa1322720:CDS 45.0%
GAGTTGCCAACATTGGATAG+TGG - chr8_4:29869684-29869703 Msa1322720:CDS 45.0%
!! CACAACCGGCTTTAAGGTAA+AGG + chr8_4:29869726-29869745 None:intergenic 45.0%
TTACCTTAAAGCCGGTTGTG+TGG - chr8_4:29869726-29869745 Msa1322720:CDS 45.0%
ATATAGAAGGACCGGACATC+CGG + chr8_4:29869779-29869798 None:intergenic 45.0%
GCTCTTCAACATCCTTCGTA+AGG - chr8_4:29869895-29869914 Msa1322720:CDS 45.0%
! CCGTACAAGGCTTTTACCAT+TGG + chr8_4:29869961-29869980 None:intergenic 45.0%
TAACAGCTGTGCAGTTGCTT+TGG - chr8_4:29870352-29870371 Msa1322720:CDS 45.0%
! AACAGCTGTGCAGTTGCTTT+GGG - chr8_4:29870353-29870372 Msa1322720:CDS 45.0%
GCTCACTGACAAGAGCTAAA+GGG + chr8_4:29870404-29870423 None:intergenic 45.0%
TTATCACGAATGCCATGTGG+AGG - chr8_4:29870475-29870494 Msa1322720:CDS 45.0%
CTGTACAGGCAAAATTGCCA+AGG + chr8_4:29871150-29871169 None:intergenic 45.0%
AACCAGAGTTCCAAGTTCAG+AGG + chr8_4:29871175-29871194 None:intergenic 45.0%
GATGTAAGTATTCGCCGTGA+CGG - chr8_4:29871265-29871284 Msa1322720:intron 45.0%
CCTGAATTGTGTGCTAGCTA+TGG + chr8_4:29871313-29871332 None:intergenic 45.0%
CCATAGCTAGCACACAATTC+AGG - chr8_4:29871310-29871329 Msa1322720:intron 45.0%
ACTACACAGGGTCACTGATC+TGG - chr8_4:29866369-29866388 Msa1322720:three_prime_UTR 50.0%
GGATAAGGATCGGAGTACAG+AGG - chr8_4:29866430-29866449 Msa1322720:three_prime_UTR 50.0%
TAAGGATCGGAGTACAGAGG+CGG - chr8_4:29866433-29866452 Msa1322720:three_prime_UTR 50.0%
TGGTGAAGAATCCCCGTAGA+AGG - chr8_4:29866483-29866502 Msa1322720:three_prime_UTR 50.0%
TGCAAGTCGGAACCTTCTAC+GGG + chr8_4:29866498-29866517 None:intergenic 50.0%
CTGCAAGTCGGAACCTTCTA+CGG + chr8_4:29866499-29866518 None:intergenic 50.0%
! TAGAAGGTTCCGACTTGCAG+CGG - chr8_4:29866499-29866518 Msa1322720:three_prime_UTR 50.0%
TTTCGAGATCCGCTGCAAGT+CGG + chr8_4:29866511-29866530 None:intergenic 50.0%
! TTTGCCCCGATTGCTATTGC+TGG - chr8_4:29866962-29866981 Msa1322720:intron 50.0%
CGTACCAGCAATAGCAATCG+GGG + chr8_4:29866969-29866988 None:intergenic 50.0%
CCGTACCAGCAATAGCAATC+GGG + chr8_4:29866970-29866989 None:intergenic 50.0%
! CCCGATTGCTATTGCTGGTA+CGG - chr8_4:29866967-29866986 Msa1322720:intron 50.0%
GGGATCAAGTACCTGCTGAT+GGG - chr8_4:29867641-29867660 Msa1322720:intron 50.0%
CCAAAGTGATAGATGGGTCG+GGG - chr8_4:29867767-29867786 Msa1322720:CDS 50.0%
AAGATGCTAGTGGCAGCTGT+TGG - chr8_4:29867790-29867809 Msa1322720:CDS 50.0%
CTGTTGGCATGAGGACTGAA+TGG - chr8_4:29867806-29867825 Msa1322720:CDS 50.0%
GTTGGCATGAGGACTGAATG+GGG - chr8_4:29867808-29867827 Msa1322720:CDS 50.0%
TTTGAATGACGTAGGGGTGG+AGG - chr8_4:29867846-29867865 Msa1322720:intron 50.0%
ACGGCCAATGGTAAACCTTC+TGG + chr8_4:29868081-29868100 None:intergenic 50.0%
AGGTTAAGTGTCACGGCCAA+TGG + chr8_4:29868093-29868112 None:intergenic 50.0%
! CAAATGATAGGGCACTCGTG+AGG - chr8_4:29868136-29868155 Msa1322720:intron 50.0%
GACAGTGACCTCCAATTGCA+TGG - chr8_4:29868218-29868237 Msa1322720:intron 50.0%
AGTGACCTCCAATTGCATGG+TGG - chr8_4:29868221-29868240 Msa1322720:intron 50.0%
!! GGAATTTGGCTTGCTGTTGG+GGG - chr8_4:29868440-29868459 Msa1322720:intron 50.0%
!! GAATTTGGCTTGCTGTTGGG+GGG - chr8_4:29868441-29868460 Msa1322720:intron 50.0%
GAACGACGTCTTTGACACCA+AGG + chr8_4:29868827-29868846 None:intergenic 50.0%
AGCAGGAGTAACCATTGCCA+TGG - chr8_4:29868860-29868879 Msa1322720:intron 50.0%
GTAACCATTGCCATGGTCAC+TGG - chr8_4:29868867-29868886 Msa1322720:intron 50.0%
CATATCATCGCCAGTGACCA+TGG + chr8_4:29868880-29868899 None:intergenic 50.0%
GTTGTTGCGGTTACTGGTGA+TGG - chr8_4:29869173-29869192 Msa1322720:CDS 50.0%
GCACACATTGGAGTTGCCAT+GGG - chr8_4:29869224-29869243 Msa1322720:CDS 50.0%
GGAGTTGCCATGGGATTATC+AGG - chr8_4:29869233-29869252 Msa1322720:CDS 50.0%
CTCTGTGCCTGATAATCCCA+TGG + chr8_4:29869243-29869262 None:intergenic 50.0%
CATGGGATTATCAGGCACAG+AGG - chr8_4:29869241-29869260 Msa1322720:CDS 50.0%
AGCAACTGCACAGCTGTTAG+CGG + chr8_4:29870351-29870370 None:intergenic 50.0%
TGACAAGAGCTAAAGGGCAG+AGG + chr8_4:29870398-29870417 None:intergenic 50.0%
GGCTCACTGACAAGAGCTAA+AGG + chr8_4:29870405-29870424 None:intergenic 50.0%
CTTATGAAGAGGCCTCCAGT+TGG - chr8_4:29870438-29870457 Msa1322720:CDS 50.0%
! TTTTCTCCCCTTCCAACTGG+AGG + chr8_4:29870453-29870472 None:intergenic 50.0%
!! CAAGTTCAGAGGCACTGTAC+AGG + chr8_4:29871164-29871183 None:intergenic 50.0%
CTGTACAGTGCCTCTGAACT+TGG - chr8_4:29871162-29871181 Msa1322720:intron 50.0%
TGCCTCTGAACTTGGAACTC+TGG - chr8_4:29871170-29871189 Msa1322720:intron 50.0%
TGTGCTAGCTATGGTTGTGC+AGG + chr8_4:29871304-29871323 None:intergenic 50.0%
GGGATTCTTCACCAGCGAGA+CGG + chr8_4:29866477-29866496 None:intergenic 55.0%
GCAAGTCGGAACCTTCTACG+GGG + chr8_4:29866497-29866516 None:intergenic 55.0%
TCTCAGTGGCAGCTGGTGTT+AGG - chr8_4:29867236-29867255 Msa1322720:intron 55.0%
! CTCAGTGGCAGCTGGTGTTA+GGG - chr8_4:29867237-29867256 Msa1322720:intron 55.0%
GGGGATCAAGTACCTGCTGA+TGG - chr8_4:29867640-29867659 Msa1322720:intron 55.0%
CCCCGACCCATCTATCACTT+TGG + chr8_4:29867770-29867789 None:intergenic 55.0%
TAGTGGCAGCTGTTGGCATG+AGG - chr8_4:29867797-29867816 Msa1322720:CDS 55.0%
GGTGGAGGAAACGCCATTAC+AGG - chr8_4:29867861-29867880 Msa1322720:intron 55.0%
ATCGCCAGTGACCATGGCAA+TGG + chr8_4:29868874-29868893 None:intergenic 55.0%
GGTGAGGTTGTTGCGGTTAC+TGG - chr8_4:29869167-29869186 Msa1322720:CDS 55.0%
TGATGCTCCTGCACTGCATG+AGG - chr8_4:29869202-29869221 Msa1322720:CDS 55.0%
ATGTGTGCCTCATGCAGTGC+AGG + chr8_4:29869212-29869231 None:intergenic 55.0%
GCACTGCATGAGGCACACAT+TGG - chr8_4:29869212-29869231 Msa1322720:CDS 55.0%
GGCACACATTGGAGTTGCCA+TGG - chr8_4:29869223-29869242 Msa1322720:CDS 55.0%
! TGGCCACACAACCGGCTTTA+AGG + chr8_4:29869732-29869751 None:intergenic 55.0%
! TAGCAGGTTGGCCACACAAC+CGG + chr8_4:29869740-29869759 None:intergenic 55.0%
GTTGTGTGGCCAACCTGCTA+CGG - chr8_4:29869740-29869759 Msa1322720:CDS 55.0%
TAAGTGGCTCCGTAGCAGGT+TGG + chr8_4:29869752-29869771 None:intergenic 55.0%
AGTGTAAGTGGCTCCGTAGC+AGG + chr8_4:29869756-29869775 None:intergenic 55.0%
CTACGGAGCCACTTACACTC+CGG - chr8_4:29869757-29869776 Msa1322720:CDS 55.0%
CCACTTACACTCCGGATGTC+CGG - chr8_4:29869765-29869784 Msa1322720:CDS 55.0%
! GGTAGGCTGCTTTCCGTACA+AGG + chr8_4:29869974-29869993 None:intergenic 55.0%
GCAACTGCACAGCTGTTAGC+GGG + chr8_4:29870350-29870369 None:intergenic 55.0%
TGAAGAGGCCTCCAGTTGGA+AGG - chr8_4:29870442-29870461 Msa1322720:CDS 55.0%
GAAGAGGCCTCCAGTTGGAA+GGG - chr8_4:29870443-29870462 Msa1322720:CDS 55.0%
AAGAGGCCTCCAGTTGGAAG+GGG - chr8_4:29870444-29870463 Msa1322720:CDS 55.0%
TATTCGCCGTGACGGTTACC+AGG - chr8_4:29871273-29871292 Msa1322720:intron 55.0%
! GAAGTGCCTGGTAACCGTCA+CGG + chr8_4:29871282-29871301 None:intergenic 55.0%
!! ATGGTTGTGCAGGAAGTGCC+TGG + chr8_4:29871294-29871313 None:intergenic 55.0%
CTTCGTGTCTCAGTGGCAGC+TGG - chr8_4:29867229-29867248 Msa1322720:intron 60.0%
TGGGTCGGGGAAGATGCTAG+TGG - chr8_4:29867780-29867799 Msa1322720:CDS 60.0%
CCGGACATCCGGAGTGTAAG+TGG + chr8_4:29869768-29869787 None:intergenic 60.0%
GTACAGAGGCGGTGAGCCGT+TGG - chr8_4:29866444-29866463 Msa1322720:three_prime_UTR 65.0%
GCGAGACGGCGCTTCTCCAA+CGG + chr8_4:29866463-29866482 None:intergenic 65.0%
!! TTGGAGAAGCGCCGTCTCGC+TGG - chr8_4:29866463-29866482 Msa1322720:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 29866274 29871664 29866274 ID=Msa1322720;Name=Msa1322720
chr8_4 mRNA 29866274 29871664 29866274 ID=Msa1322720-mRNA-1;Parent=Msa1322720;Name=Msa1322720-mRNA-1;_AED=0.12;_eAED=0.12;_QI=124|1|1|1|1|1|7|349|1023
chr8_4 exon 29866274 29866916 29866274 ID=Msa1322720-mRNA-1:exon:9983;Parent=Msa1322720-mRNA-1
chr8_4 exon 29867300 29867598 29867300 ID=Msa1322720-mRNA-1:exon:9982;Parent=Msa1322720-mRNA-1
chr8_4 exon 29867670 29867841 29867670 ID=Msa1322720-mRNA-1:exon:9981;Parent=Msa1322720-mRNA-1
chr8_4 exon 29868676 29868834 29868676 ID=Msa1322720-mRNA-1:exon:9980;Parent=Msa1322720-mRNA-1
chr8_4 exon 29868916 29870837 29868916 ID=Msa1322720-mRNA-1:exon:9979;Parent=Msa1322720-mRNA-1
chr8_4 exon 29870955 29871021 29870955 ID=Msa1322720-mRNA-1:exon:9978;Parent=Msa1322720-mRNA-1
chr8_4 exon 29871382 29871664 29871382 ID=Msa1322720-mRNA-1:exon:9977;Parent=Msa1322720-mRNA-1
chr8_4 five_prime_UTR 29871541 29871664 29871541 ID=Msa1322720-mRNA-1:five_prime_utr;Parent=Msa1322720-mRNA-1
chr8_4 CDS 29871382 29871540 29871382 ID=Msa1322720-mRNA-1:cds;Parent=Msa1322720-mRNA-1
chr8_4 CDS 29870955 29871021 29870955 ID=Msa1322720-mRNA-1:cds;Parent=Msa1322720-mRNA-1
chr8_4 CDS 29868916 29870837 29868916 ID=Msa1322720-mRNA-1:cds;Parent=Msa1322720-mRNA-1
chr8_4 CDS 29868676 29868834 29868676 ID=Msa1322720-mRNA-1:cds;Parent=Msa1322720-mRNA-1
chr8_4 CDS 29867670 29867841 29867670 ID=Msa1322720-mRNA-1:cds;Parent=Msa1322720-mRNA-1
chr8_4 CDS 29867300 29867598 29867300 ID=Msa1322720-mRNA-1:cds;Parent=Msa1322720-mRNA-1
chr8_4 CDS 29866623 29866916 29866623 ID=Msa1322720-mRNA-1:cds;Parent=Msa1322720-mRNA-1
chr8_4 three_prime_UTR 29866274 29866622 29866274 ID=Msa1322720-mRNA-1:three_prime_utr;Parent=Msa1322720-mRNA-1
Gene Sequence

>Msa1322720

ATGGAGGAATTTCTGGAAGACTTCGAATTAGTGGATAAGGATCGGAGTACAGAGGCGGTGAGCCGTTGGAGAAGCGCCGTCTCGCTGGTGAAGAATCCCCGTAGAAGGTTCCGACTTGCAGCGGATCTCGAAAAACGTGCCCTATTACAAGAAAAGCAGGAAAAGCTTCGGGCTGTACTAAATGTTCAAAGAGCAGCTTTACATTTTGCCCCGATTGCTATTGCTGATCCTGATTATGTTGAAGTGCATGTTGATGGTTTTGACATTGATCCAGATTCAATTGCATCTCTTGTTCATAACTATGATAGCAATGGTTTCAAAAAAATTAATGGAGTTGAAGGCATTGCAAGGAAACTTCGTGTCTCAGTGGCAGCTGGTGTTAGGGAAAATAGCCTAAATACCCGGCAACACTATTTTGGGTTTAACCGCTATGCAGAAAAACATGCGAAACCTTTTATTAAATTTGTGTGGGAATCAATGCTAGACTCAACACTCATTTTTCTTATGGTTTGTTCCATAGTTTTAATAGGTGGAAAATTTGCCACTGAAGGGTTGCTAGTAAATGTGTATGATGAGGTGGGTATTATACTTGGTGTATTCTTTTTGGTCGTCTTTACATCGGTCATTGATTACCATCAATCATTGAAGTTCTGCGAATGGGACAGAGAGAACAAGAACATTTCAGTTAAGGTCACACGAGATGGGAAAAGACAGAAGATATCGATTTATGATCTCGTAGTAGGAGACATTGTTCATTTGTCAATTGGGGATCAAGTACCTGCTGATGGGATTTGCATATCAGGAAGTAATTTACACATCGACGAATCAAGTTTAACTGGTCAGGTTGACCCAGTTTATGTAAATCAAGAAAACCCTTTTCTACTTTCGGGAACCAAAGTGATAGATGGGTCGGGGAAGATGCTAGTGGCAGCTGTTGGCATGAGGACTGAATGGGGAAAGTTAGTAGAAGTTTTGAATGACGTAGGGGTGGAGGAAACGCCATTACAGGTGAAACTGAACGGAGTTGCTACTATTGTTGGTAAGATTGGCTTGAGTTTTGCTCTTCTTACATTAGCTGTGTTGGTGATACAATTTCTTGTGTATAAAGCAACTCGCGGAGATTTTACTAATTGGTCCTCAAAAGATGCTATGAAGCTGCTGAACTACATTAATATACTTGTGACAATGATAGTCATTGCTGTTCCAGAAGGTTTACCATTGGCCGTGACACTTAACCTTGCTTTTGCAACGAAAAGTTTAACAAATGATAGGGCACTCGTGAGGCATCTTTCTGCATGTGAAGCAATGGGTTCTGCCAGTTATATTTGCTTAGATAAAACAGGGACAGTGACCTCCAATTGCATGGTGGTCAATAAACTATGGATATCTGGAGAAGTTGTGGAGATGAAAGATAATAGGAATGGAAATAAACTGAAAGGAAAGATATCTGAAGAAGTTCTGAACATACTTTTGCAGGCTTTATTCCAAAATAATGCTTCCGAAATGGTTAAGGATAAACAAGGAAAAACCACAATATTGGGAACTCCAACAGATTCAGCATTGTTGGAATTTGGCTTGCTGTTGGGGGGTAATTTTGATGTCCAATGCCAATTGTATAGGAAACTTAAGATTGAGCCTTTTAATCCTGTTTACAAGATGATGACAGTCCTTGTTAGTCTTCCCAATGGTGGACTACGAGTTTTCTGTAAAGGTGCTTCTGAAATAATATTTAAAATGTGTGAAAAAATCATCGACTGCAATGGAGTAGCTGTTGATTTCCTTGAAAACCATGCGAAGAATGTCGATCTTGTTCTAAAAGATTTTGCCTCTGAACCTTTGAGAACTATTTCTTTAGCTTACAAAGATATAAATGTAATCCCTACTGAAAACAACATCCCTGATAATGGCTATACACTGATAGCCATTCTAGGAATCAATGATCCTATACGCCTTGGTGTCAAAGACGTCGTTCAAACTTGTATAGCAGCAGGAGTAACCATTGCCATGGTCACTGGCGATGATATGAATATAGCTAGGACTATTGCTACAGAATGTGGTATACTCACCAATAATGGTTTAACCATTGAAGGACAACAATTTCGGAACTTGTCTACAATGGATATGGAGGTTACCATACCAAAAATTCAGGTGATGGCGCGATTCCTACCACATGACAAACACTCCATTGTAGCTTATCTGAAGGATATGTTTGGTGAGGTTGTTGCGGTTACTGGTGATGGAATCAGTGATGCTCCTGCACTGCATGAGGCACACATTGGAGTTGCCATGGGATTATCAGGCACAGAGATTGCCAAAGAAAATGCTGATATAATTTTAATGGACGACAACATCACTACTATTGTCAATATTATCAAATGGGGACGTGCGGTATATATAAACATTCAAAAATTAGTGCAGTTTCAGTTAACAGCCATTATTGTTGCTCTGGTGATCAACTTTATTTCTGCTTCTGTCACAGGTTATGTCCCGCTAACAGCTGTGCAGTTGCTTTGGGTCAACTTGATTATGGACATCCTCTGCCCTTTAGCTCTTGTCAGTGAGCCACTTAACGATGAACTTATGAAGAGGCCTCCAGTTGGAAGGGGAGAAAAATTTATCACGAATGCCATGTGGAGGAATATTTTTGGCCAAAGCATATATCAAGTTATTGTCCTTATGGTTCTTAATTTTCAAGGGAAGAATATACTTGGTATAAGTGGTTCAAATGCAACTGATGTGCTTAGAACTTTGATCTTCAACTCCTTTATATTTTTTCAGGTATTCAATGAGATAAACTGCAGAGAGATAGAGAAGATAAACATTTTCAGAGGCATTTTAAACAGCTGGGCATTTTCGGTCATAATTTTCTCAACAGTTGCAATTCAAGTAATCATTGTGCAGTTCCTTGGCAATTTTGCCTGTACAGTGCCTCTGAACTTGGAACTCTGGTTAATTAGTGTTTTAATTGGTGCTACTAGCATGCTTATAGCTTGTCTTCTGAAGTGCTTCCCAATTGAAAAAGATGTAAGTATTCGCCGTGACGGTTACCAGGCACTTCCTGCACAACCATAG
Protein sequence

>Msa1322720

MEEFLEDFELVDKDRSTEAVSRWRSAVSLVKNPRRRFRLAADLEKRALLQEKQEKLRAVLNVQRAALHFAPIAIADPDYVEVHVDGFDIDPDSIASLVHNYDSNGFKKINGVEGIARKLRVSVAAGVRENSLNTRQHYFGFNRYAEKHAKPFIKFVWESMLDSTLIFLMVCSIVLIGGKFATEGLLVNVYDEVGIILGVFFLVVFTSVIDYHQSLKFCEWDRENKNISVKVTRDGKRQKISIYDLVVGDIVHLSIGDQVPADGICISGSNLHIDESSLTGQVDPVYVNQENPFLLSGTKVIDGSGKMLVAAVGMRTEWGKLVEVLNDVGVEETPLQVKLNGVATIVGKIGLSFALLTLAVLVIQFLVYKATRGDFTNWSSKDAMKLLNYINILVTMIVIAVPEGLPLAVTLNLAFATKSLTNDRALVRHLSACEAMGSASYICLDKTGTVTSNCMVVNKLWISGEVVEMKDNRNGNKLKGKISEEVLNILLQALFQNNASEMVKDKQGKTTILGTPTDSALLEFGLLLGGNFDVQCQLYRKLKIEPFNPVYKMMTVLVSLPNGGLRVFCKGASEIIFKMCEKIIDCNGVAVDFLENHAKNVDLVLKDFASEPLRTISLAYKDINVIPTENNIPDNGYTLIAILGINDPIRLGVKDVVQTCIAAGVTIAMVTGDDMNIARTIATECGILTNNGLTIEGQQFRNLSTMDMEVTIPKIQVMARFLPHDKHSIVAYLKDMFGEVVAVTGDGISDAPALHEAHIGVAMGLSGTEIAKENADIILMDDNITTIVNIIKWGRAVYINIQKLVQFQLTAIIVALVINFISASVTGYVPLTAVQLLWVNLIMDILCPLALVSEPLNDELMKRPPVGRGEKFITNAMWRNIFGQSIYQVIVLMVLNFQGKNILGISGSNATDVLRTLIFNSFIFFQVFNEINCREIEKINIFRGILNSWAFSVIIFSTVAIQVIIVQFLGNFACTVPLNLELWLISVLIGATSMLIACLLKCFPIEKDVSIRRDGYQALPAQP*