Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1169140 | XP_013449983.2 | 97.674 | 645 | 10 | 2 | 1 | 644 | 1 | 641 | 0.0 | 1300 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1169140 | sp|Q9ZQF9|MBR1_ARATH | 47.468 | 158 | 73 | 4 | 486 | 637 | 548 | 701 | 3.26e-35 | 145 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1169140 | A0A396H5B7 | 97.372 | 647 | 10 | 3 | 1 | 644 | 1 | 643 | 0.0 | 1294 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0652700 | Msa1169140 | 0.805558 | 1.259619e-49 | -8.615850e-47 |
Msa0205660 | Msa1169140 | 0.806779 | 6.968949e-50 | -8.615850e-47 |
Msa1042730 | Msa1169140 | 0.958695 | 1.245680e-116 | -8.615850e-47 |
Msa1085520 | Msa1169140 | 0.806532 | 7.857581e-50 | -8.615850e-47 |
Msa1169140 | Msa1169320 | 0.958207 | 4.161278e-116 | -8.615850e-47 |
Msa1169140 | Msa1462850 | 0.809006 | 2.341994e-50 | -8.615850e-47 |
Msa0573360 | Msa1169140 | 0.804297 | 2.311605e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1169140 | MtrunA17_Chr7g0263911 | 97.372 | 647 | 10 | 3 | 1 | 644 | 1 | 643 | 0.0 | 1294 |
Msa1169140 | MtrunA17_Chr1g0181401 | 57.581 | 554 | 209 | 12 | 91 | 640 | 1 | 532 | 0.0 | 586 |
Msa1169140 | MtrunA17_Chr1g0153211 | 49.600 | 125 | 58 | 3 | 516 | 637 | 584 | 706 | 2.16e-34 | 139 |
Msa1169140 | MtrunA17_Chr4g0044601 | 46.104 | 154 | 76 | 4 | 487 | 637 | 548 | 697 | 3.62e-34 | 138 |
Msa1169140 | MtrunA17_Chr2g0316601 | 44.025 | 159 | 73 | 4 | 498 | 643 | 367 | 522 | 9.64e-34 | 135 |
Msa1169140 | MtrunA17_Chr2g0316591 | 43.262 | 141 | 77 | 3 | 505 | 644 | 167 | 305 | 1.01e-32 | 129 |
Msa1169140 | MtrunA17_Chr3g0138951 | 51.304 | 115 | 46 | 2 | 531 | 636 | 419 | 532 | 1.90e-30 | 126 |
Msa1169140 | MtrunA17_Chr1g0147951 | 48.214 | 112 | 48 | 2 | 531 | 633 | 359 | 469 | 1.78e-27 | 116 |
Msa1169140 | MtrunA17_Chr6g0483631 | 45.385 | 130 | 63 | 4 | 514 | 637 | 230 | 357 | 1.79e-26 | 111 |
Msa1169140 | MtrunA17_Chr8g0392341 | 43.939 | 132 | 66 | 4 | 509 | 633 | 217 | 347 | 4.61e-25 | 107 |
Msa1169140 | MtrunA17_Chr2g0315711 | 32.110 | 218 | 127 | 7 | 434 | 637 | 119 | 329 | 6.13e-25 | 106 |
Msa1169140 | MtrunA17_Chr1g0211831 | 38.255 | 149 | 81 | 6 | 495 | 634 | 184 | 330 | 4.19e-17 | 83.2 |
Msa1169140 | MtrunA17_Chr4g0032561 | 41.121 | 107 | 58 | 3 | 541 | 644 | 144 | 248 | 4.84e-17 | 81.3 |
Msa1169140 | MtrunA17_Chr2g0315681 | 38.462 | 91 | 45 | 2 | 532 | 612 | 87 | 176 | 8.05e-15 | 73.2 |
Msa1169140 | MtrunA17_Chr8g0352131 | 38.235 | 102 | 60 | 3 | 541 | 640 | 144 | 244 | 2.78e-14 | 73.2 |
Msa1169140 | MtrunA17_Chr3g0124751 | 40.449 | 89 | 52 | 1 | 544 | 632 | 139 | 226 | 1.07e-13 | 71.2 |
Msa1169140 | MtrunA17_Chr3g0086891 | 37.255 | 102 | 55 | 3 | 541 | 637 | 348 | 445 | 1.64e-13 | 73.2 |
Msa1169140 | MtrunA17_Chr5g0401961 | 34.426 | 122 | 68 | 5 | 531 | 644 | 486 | 603 | 2.94e-13 | 72.8 |
Msa1169140 | MtrunA17_Chr3g0118101 | 50.000 | 46 | 23 | 0 | 591 | 636 | 114 | 159 | 8.30e-12 | 64.3 |
Msa1169140 | MtrunA17_Chr3g0118091 | 38.028 | 71 | 39 | 2 | 570 | 635 | 41 | 111 | 4.25e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1169140 | AT2G37150.14 | 39.755 | 571 | 321 | 10 | 80 | 643 | 6 | 560 | 6.81e-105 | 329 |
Msa1169140 | AT2G37150.13 | 39.755 | 571 | 321 | 10 | 80 | 643 | 6 | 560 | 6.81e-105 | 329 |
Msa1169140 | AT2G37150.15 | 39.755 | 571 | 321 | 10 | 80 | 643 | 6 | 560 | 6.81e-105 | 329 |
Msa1169140 | AT2G37150.3 | 39.759 | 581 | 326 | 11 | 70 | 643 | 34 | 597 | 8.19e-105 | 330 |
Msa1169140 | AT2G37150.10 | 40.357 | 560 | 311 | 10 | 91 | 643 | 1 | 544 | 3.58e-104 | 327 |
Msa1169140 | AT2G37150.11 | 40.357 | 560 | 311 | 10 | 91 | 643 | 1 | 544 | 3.58e-104 | 327 |
Msa1169140 | AT2G37150.9 | 40.357 | 560 | 311 | 10 | 91 | 643 | 1 | 544 | 3.58e-104 | 327 |
Msa1169140 | AT2G37150.12 | 40.357 | 560 | 311 | 10 | 91 | 643 | 1 | 544 | 3.58e-104 | 327 |
Msa1169140 | AT2G37150.5 | 40.357 | 560 | 311 | 10 | 91 | 643 | 1 | 544 | 3.58e-104 | 327 |
Msa1169140 | AT2G37150.4 | 40.357 | 560 | 311 | 10 | 91 | 643 | 1 | 544 | 3.58e-104 | 327 |
Msa1169140 | AT2G37150.2 | 40.357 | 560 | 311 | 10 | 91 | 643 | 1 | 544 | 3.58e-104 | 327 |
Msa1169140 | AT2G37150.8 | 40.357 | 560 | 311 | 10 | 91 | 643 | 1 | 544 | 3.58e-104 | 327 |
Msa1169140 | AT2G37150.7 | 40.357 | 560 | 311 | 10 | 91 | 643 | 1 | 544 | 3.58e-104 | 327 |
Msa1169140 | AT2G37150.6 | 40.357 | 560 | 311 | 10 | 91 | 643 | 1 | 544 | 3.58e-104 | 327 |
Msa1169140 | AT2G37150.1 | 40.357 | 560 | 311 | 10 | 91 | 643 | 1 | 544 | 3.58e-104 | 327 |
Msa1169140 | AT2G15530.5 | 47.468 | 158 | 73 | 4 | 486 | 637 | 548 | 701 | 3.32e-36 | 145 |
Msa1169140 | AT2G15530.3 | 47.468 | 158 | 73 | 4 | 486 | 637 | 548 | 701 | 3.32e-36 | 145 |
Msa1169140 | AT2G15530.2 | 47.468 | 158 | 73 | 4 | 486 | 637 | 548 | 701 | 3.32e-36 | 145 |
Msa1169140 | AT2G15530.1 | 47.468 | 158 | 73 | 4 | 486 | 637 | 548 | 701 | 3.32e-36 | 145 |
Msa1169140 | AT2G15530.7 | 47.468 | 158 | 73 | 4 | 486 | 637 | 548 | 701 | 3.32e-36 | 145 |
Msa1169140 | AT2G15530.6 | 47.468 | 158 | 73 | 4 | 486 | 637 | 526 | 679 | 3.66e-36 | 145 |
Msa1169140 | AT4G34040.1 | 46.753 | 154 | 77 | 3 | 486 | 637 | 514 | 664 | 3.81e-36 | 144 |
Msa1169140 | AT2G15530.4 | 46.104 | 154 | 73 | 4 | 486 | 633 | 548 | 697 | 8.14e-33 | 135 |
Msa1169140 | AT5G10650.1 | 53.097 | 113 | 45 | 2 | 534 | 639 | 411 | 522 | 3.15e-32 | 131 |
Msa1169140 | AT5G10650.2 | 53.097 | 113 | 45 | 2 | 534 | 639 | 411 | 522 | 3.15e-32 | 131 |
Msa1169140 | AT5G42940.2 | 41.615 | 161 | 84 | 4 | 490 | 644 | 533 | 689 | 1.36e-31 | 131 |
Msa1169140 | AT5G42940.1 | 41.615 | 161 | 84 | 4 | 490 | 644 | 533 | 689 | 1.36e-31 | 131 |
Msa1169140 | AT4G31450.1 | 47.727 | 132 | 57 | 2 | 516 | 636 | 362 | 492 | 2.10e-31 | 129 |
Msa1169140 | AT4G31450.2 | 47.727 | 132 | 57 | 2 | 516 | 636 | 362 | 492 | 2.10e-31 | 129 |
Msa1169140 | AT5G24870.3 | 43.713 | 167 | 81 | 4 | 477 | 636 | 352 | 512 | 2.11e-31 | 129 |
Msa1169140 | AT5G24870.1 | 43.713 | 167 | 81 | 4 | 477 | 636 | 352 | 512 | 2.11e-31 | 129 |
Msa1169140 | AT5G24870.2 | 43.713 | 167 | 81 | 4 | 477 | 636 | 352 | 512 | 2.11e-31 | 129 |
Msa1169140 | AT1G73760.1 | 40.876 | 137 | 76 | 3 | 504 | 636 | 228 | 363 | 3.04e-30 | 123 |
Msa1169140 | AT1G45180.2 | 42.384 | 151 | 80 | 4 | 490 | 637 | 443 | 589 | 7.57e-30 | 125 |
Msa1169140 | AT1G45180.1 | 42.384 | 151 | 80 | 4 | 490 | 637 | 491 | 637 | 9.87e-30 | 125 |
Msa1169140 | AT1G45180.3 | 42.384 | 151 | 80 | 4 | 490 | 637 | 491 | 637 | 9.87e-30 | 125 |
Msa1169140 | AT1G45180.4 | 42.384 | 151 | 80 | 4 | 490 | 637 | 491 | 637 | 9.87e-30 | 125 |
Msa1169140 | AT3G15070.1 | 40.000 | 175 | 91 | 6 | 478 | 644 | 312 | 480 | 5.12e-29 | 121 |
Msa1169140 | AT3G15070.2 | 40.000 | 175 | 91 | 6 | 478 | 644 | 312 | 480 | 5.12e-29 | 121 |
Msa1169140 | AT1G53190.2 | 43.836 | 146 | 65 | 5 | 511 | 642 | 350 | 492 | 5.46e-29 | 121 |
Msa1169140 | AT1G53190.1 | 43.836 | 146 | 65 | 5 | 511 | 642 | 350 | 492 | 5.46e-29 | 121 |
Msa1169140 | AT1G17970.1 | 48.544 | 103 | 51 | 2 | 534 | 636 | 264 | 364 | 1.11e-25 | 109 |
Msa1169140 | AT3G47180.1 | 42.857 | 91 | 52 | 0 | 544 | 634 | 115 | 205 | 2.42e-18 | 84.7 |
Msa1169140 | AT3G19910.1 | 35.032 | 157 | 89 | 6 | 485 | 634 | 180 | 330 | 2.12e-16 | 81.6 |
Msa1169140 | AT5G52140.1 | 39.252 | 107 | 54 | 3 | 542 | 638 | 175 | 280 | 2.28e-15 | 77.4 |
Msa1169140 | AT5G10650.3 | 51.471 | 68 | 26 | 1 | 534 | 594 | 411 | 478 | 9.89e-15 | 77.8 |
Msa1169140 | AT1G36950.1 | 34.579 | 107 | 68 | 2 | 530 | 636 | 20 | 124 | 1.65e-14 | 73.9 |
Msa1169140 | AT4G00070.1 | 37.000 | 100 | 61 | 2 | 528 | 627 | 82 | 179 | 3.34e-14 | 71.6 |
Msa1169140 | AT5G67120.1 | 37.895 | 95 | 55 | 3 | 544 | 637 | 181 | 272 | 7.29e-14 | 72.8 |
Msa1169140 | AT3G63530.2 | 38.614 | 101 | 59 | 2 | 541 | 639 | 145 | 244 | 7.52e-14 | 72.4 |
Msa1169140 | AT3G63530.1 | 38.614 | 101 | 59 | 2 | 541 | 639 | 145 | 244 | 7.52e-14 | 72.4 |
Find 182 sgRNAs with CRISPR-Local
Find 546 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATCTCATTTGTACATATATT+TGG | 0.139815 | 7_4:+62088033 | Msa1169140:three_prime_UTR |
GGTTTCTCTGGCCATGATTC+TGG | 0.154814 | 7_4:-62086410 | None:intergenic |
GGAAGCTTCCATCATGAATT+TGG | 0.182286 | 7_4:+62086912 | Msa1169140:CDS |
GGGAGTTGCAAGTGCAATTA+TGG | 0.191349 | 7_4:+62085738 | Msa1169140:CDS |
TCAAATTCACAACGATTTCT+AGG | 0.207018 | 7_4:-62088161 | None:intergenic |
GTGAATGGCTACTTGATAAA+TGG | 0.235007 | 7_4:-62086580 | None:intergenic |
ATATATTGAGGATCCATATT+TGG | 0.255685 | 7_4:-62086431 | None:intergenic |
AATACAGATGCTAGTACTTT+TGG | 0.272244 | 7_4:+62086816 | Msa1169140:intron |
AAATGCTTGTCTGTCATAAT+TGG | 0.279951 | 7_4:-62086240 | None:intergenic |
GAGCCGTTCTTCACTTGATT+TGG | 0.287884 | 7_4:+62086538 | Msa1169140:CDS |
AGAGATCCACTCCAGCTTAT+AGG | 0.289351 | 7_4:+62087015 | Msa1169140:CDS |
TGAGGAAACAGACTAGCTTT+TGG | 0.307735 | 7_4:+62088070 | Msa1169140:three_prime_UTR |
AGGAGGTGGTACTTCAATAT+TGG | 0.308435 | 7_4:-62086108 | None:intergenic |
GAAGGGTTTGTTTGATTTGT+TGG | 0.335975 | 7_4:-62080789 | None:intergenic |
TTGTGAATTTGAAACGGTTC+TGG | 0.342500 | 7_4:+62088172 | Msa1169140:three_prime_UTR |
CAAGCGACACCTTCAGATAA+TGG | 0.347853 | 7_4:+62087062 | Msa1169140:CDS |
GGAGGTGGTACTTCAATATT+GGG | 0.351124 | 7_4:-62086107 | None:intergenic |
TCATAGACTGAAGGAATTCC+AGG | 0.351639 | 7_4:-62086329 | None:intergenic |
GTTGAGCGTGCCTCACTATA+TGG | 0.351826 | 7_4:+62087468 | Msa1169140:CDS |
GTGCCTCACTATATGGTTCT+AGG | 0.355881 | 7_4:+62087475 | Msa1169140:CDS |
GGCTTCTTCAAGCTTGCGCT+TGG | 0.356563 | 7_4:+62087037 | Msa1169140:CDS |
GTCAGCATATTATTCCAATT+CGG | 0.358180 | 7_4:-62085811 | None:intergenic |
AATAACATTCTTCCATTAGT+AGG | 0.359125 | 7_4:-62086707 | None:intergenic |
GAGATCCACTCCAGCTTATA+GGG | 0.360518 | 7_4:+62087016 | Msa1169140:CDS |
GCAGCAGCAGCATTTCCAAC+AGG | 0.364303 | 7_4:-62086858 | None:intergenic |
GGGACCAGCTCTTCAGAAAA+TGG | 0.368292 | 7_4:+62085984 | Msa1169140:CDS |
ACATTTATTTCCCTTCTCAT+TGG | 0.369183 | 7_4:+62086045 | Msa1169140:CDS |
ATGGCCAGAGAAACCAAATA+TGG | 0.369829 | 7_4:+62086418 | Msa1169140:CDS |
GGATCCATATTTGGTTTCTC+TGG | 0.370346 | 7_4:-62086422 | None:intergenic |
ATATAGATCACTGGCTGATC+AGG | 0.374078 | 7_4:+62087193 | Msa1169140:CDS |
TCAGCATATTATTCCAATTC+GGG | 0.382496 | 7_4:-62085810 | None:intergenic |
TGAAAACTTTGAGCAGTAGT+AGG | 0.391096 | 7_4:-62086948 | None:intergenic |
CAAGCATTTCATGTTGATAG+TGG | 0.392945 | 7_4:+62086254 | Msa1169140:CDS |
AGGGTGAGGCTGACCCGAAT+TGG | 0.392950 | 7_4:+62085797 | Msa1169140:CDS |
GCCTATAGGAAAGAAGAAAA+AGG | 0.393544 | 7_4:+62080583 | None:intergenic |
TGCATGCCAATGAATTTGTT+TGG | 0.396197 | 7_4:+62088116 | Msa1169140:three_prime_UTR |
GGAGTTGCAAGTGCAATTAT+GGG | 0.400534 | 7_4:+62085739 | Msa1169140:CDS |
TAGTAGGAGTTACGTTCATT+TGG | 0.403350 | 7_4:-62086691 | None:intergenic |
TGCAGGTTTCTTGTTGCTGT+TGG | 0.410961 | 7_4:+62081800 | Msa1169140:intron |
AGAGTTCTGTAAGGAATGTT+AGG | 0.423983 | 7_4:+62086516 | Msa1169140:CDS |
ATGAACGTAACTCCTACTAA+TGG | 0.432531 | 7_4:+62086695 | Msa1169140:CDS |
TTGGACATCCTTCAAAATTG+AGG | 0.434662 | 7_4:+62088052 | Msa1169140:three_prime_UTR |
CCACCTCTCTGACAAGGGAT+TGG | 0.435237 | 7_4:+62086666 | Msa1169140:CDS |
TAGCTTGGCCGATCTTTCTC+AGG | 0.439025 | 7_4:+62086640 | Msa1169140:CDS |
TCAAGTGGGTATTTCAATGC+TGG | 0.442176 | 7_4:+62086362 | Msa1169140:CDS |
GAAGAATAAGAAGGAGAAGA+AGG | 0.450486 | 7_4:-62080767 | None:intergenic |
AGTACCACCTCCTCATCAAT+TGG | 0.454819 | 7_4:+62086118 | Msa1169140:CDS |
AAGCGACACCTTCAGATAAT+GGG | 0.461513 | 7_4:+62087063 | Msa1169140:CDS |
CTTTAGGAACTACTTGCACT+TGG | 0.462097 | 7_4:+62087631 | Msa1169140:intron |
ACAAGAACATGGACGATGTT+GGG | 0.462715 | 7_4:+62087871 | Msa1169140:CDS |
TGGATCCTCAATATATGCCT+TGG | 0.464205 | 7_4:+62086438 | Msa1169140:CDS |
TATTTATCCTTCCTATCCTC+AGG | 0.468786 | 7_4:-62087990 | None:intergenic |
CAGACAATCCTGTGTTCACT+TGG | 0.471092 | 7_4:-62087666 | None:intergenic |
TTTATGCATTCGTCTAGTGC+TGG | 0.472042 | 7_4:+62086170 | Msa1169140:CDS |
TCGAAGCCAAACAAATTCAT+TGG | 0.475132 | 7_4:-62088122 | None:intergenic |
AAAATTTGACTCAGACTGCT+AGG | 0.475787 | 7_4:+62086970 | Msa1169140:CDS |
GCTTCTTCAAGCTTGCGCTT+GGG | 0.476104 | 7_4:+62087038 | Msa1169140:CDS |
AACGCCAACACAAGGTCAAA+TGG | 0.479985 | 7_4:+62086068 | Msa1169140:CDS |
AAAGATCGGCCAAGCTAGAA+TGG | 0.481857 | 7_4:-62086634 | None:intergenic |
GCCTTGGGATCATGCTGCTA+TGG | 0.486471 | 7_4:+62086454 | Msa1169140:CDS |
TGAAGAAGCGGAAGAGGAAG+AGG | 0.490955 | 7_4:-62080859 | None:intergenic |
GAGCAGTTAACGCATTAAAT+CGG | 0.491262 | 7_4:+62080630 | Msa1169140:five_prime_UTR |
TATTGTTTCTGTCACACACT+TGG | 0.491585 | 7_4:-62087701 | None:intergenic |
ATCTCCAATGTTTGAGGGTG+AGG | 0.491644 | 7_4:+62085783 | Msa1169140:CDS |
TCAGCCTCACCCTCAAACAT+TGG | 0.493572 | 7_4:-62085787 | None:intergenic |
AAATCGTTGTGAATTTGAAA+CGG | 0.494224 | 7_4:+62088166 | Msa1169140:three_prime_UTR |
CAATGCATCTCCAATGTTTG+AGG | 0.494915 | 7_4:+62085777 | Msa1169140:CDS |
CTTGCACTTGGGGAGAGGAT+TGG | 0.495807 | 7_4:+62087643 | Msa1169140:CDS |
GGATCCTCAATATATGCCTT+GGG | 0.500102 | 7_4:+62086439 | Msa1169140:CDS |
AAAGCAGAAGATTTGCAGAT+AGG | 0.502145 | 7_4:-62087966 | None:intergenic |
AATGCATCTCCAATGTTTGA+GGG | 0.503303 | 7_4:+62085778 | Msa1169140:CDS |
CCAACAGTGTTCAATAGCCT+TGG | 0.503973 | 7_4:-62087122 | None:intergenic |
AATCGGTGAAGAAGCGGAAG+AGG | 0.505677 | 7_4:-62080865 | None:intergenic |
GGCCATGATTCTGGAGGTAT+CGG | 0.506838 | 7_4:-62086401 | None:intergenic |
TAACGCATTAAATCGGTAAC+CGG | 0.507595 | 7_4:+62080637 | Msa1169140:five_prime_UTR |
GAGACAAGTCACTTCCCTGT+TGG | 0.507672 | 7_4:+62086843 | Msa1169140:CDS |
GAAGCGGTTGAGTAACGATC+TGG | 0.509445 | 7_4:-62080837 | None:intergenic |
ACCAGTCAGCCATTCTAGCT+TGG | 0.509993 | 7_4:+62086625 | Msa1169140:CDS |
AGGTGCCGGTCTCTCAATGA+AGG | 0.510660 | 7_4:+62086490 | Msa1169140:CDS |
TGAATGGCTACTTGATAAAT+GGG | 0.512903 | 7_4:-62086579 | None:intergenic |
GGCTATTGAACACTGTTGGC+TGG | 0.513351 | 7_4:+62087126 | Msa1169140:CDS |
AACTACTTGCACTTGGGGAG+AGG | 0.514653 | 7_4:+62087638 | Msa1169140:CDS |
TTCCGATACCTCCAGAATCA+TGG | 0.515158 | 7_4:+62086399 | Msa1169140:CDS |
CTTCTGCTTTGCCTGAGGAT+AGG | 0.517558 | 7_4:+62087979 | Msa1169140:CDS |
AGCTAGAATGGCTGACTGGT+GGG | 0.518106 | 7_4:-62086622 | None:intergenic |
TGCTTTGCCTGAGGATAGGA+AGG | 0.519257 | 7_4:+62087983 | Msa1169140:CDS |
GAAAACTTTGAGCAGTAGTA+GGG | 0.519509 | 7_4:-62086947 | None:intergenic |
CAAGTGGGTATTTCAATGCT+GGG | 0.520209 | 7_4:+62086363 | Msa1169140:CDS |
AGCGGAAGAGGAAGAGGAAG+CGG | 0.520299 | 7_4:-62080853 | None:intergenic |
CTTGAAGAAGCCCTATAAGC+TGG | 0.523408 | 7_4:-62087026 | None:intergenic |
CCTCATCAATTGGACACATC+GGG | 0.526324 | 7_4:+62086128 | Msa1169140:CDS |
ATTGATCTTACAATGGGGAG+TGG | 0.527172 | 7_4:+62086281 | Msa1169140:CDS |
AAATTTGACTCAGACTGCTA+GGG | 0.527930 | 7_4:+62086971 | Msa1169140:CDS |
TTTAGGAACTACTTGCACTT+GGG | 0.529511 | 7_4:+62087632 | Msa1169140:intron |
TCAAATGGATATGCATCCTC+AGG | 0.533367 | 7_4:+62086083 | Msa1169140:CDS |
TACAAGAACATGGACGATGT+TGG | 0.533968 | 7_4:+62087870 | Msa1169140:CDS |
TTGTTCGTCTGACCAATGTC+AGG | 0.534140 | 7_4:+62087726 | Msa1169140:CDS |
TGGCTGACTGGTGGGACAGT+AGG | 0.535357 | 7_4:-62086614 | None:intergenic |
TGGCGGAACAGTGACAGAAA+TGG | 0.538772 | 7_4:+62087146 | Msa1169140:CDS |
CTCACCCTTCATTGAGAGAC+CGG | 0.539483 | 7_4:-62086495 | None:intergenic |
TAGGATACGAGCTGTGTGAA+TGG | 0.539772 | 7_4:-62086595 | None:intergenic |
GTTGGGACACTTAAAACTTG+TGG | 0.539772 | 7_4:+62087888 | Msa1169140:CDS |
GGTTTCCACCTCTCTGACAA+GGG | 0.539943 | 7_4:+62086661 | Msa1169140:CDS |
CTGTCATAATTGGAAGAAGA+AGG | 0.540061 | 7_4:-62086230 | None:intergenic |
TAAATGGGTCCTACACAGGT+TGG | 0.540146 | 7_4:-62086564 | None:intergenic |
AGAGTAACCTTCAGCTACCA+TGG | 0.544763 | 7_4:-62087090 | None:intergenic |
ATTTGGAATCCAACCTGTGT+AGG | 0.548678 | 7_4:+62086555 | Msa1169140:CDS |
TCCTCATCAATTGGACACAT+CGG | 0.552501 | 7_4:+62086127 | Msa1169140:CDS |
GTGTTGGCGTTCCAATGAGA+AGG | 0.554169 | 7_4:-62086056 | None:intergenic |
GCTATGGCTCCCACATTCAG+AGG | 0.554321 | 7_4:+62086470 | Msa1169140:CDS |
TATGAGAGAGGCAGTTCAAG+TGG | 0.554792 | 7_4:+62086347 | Msa1169140:CDS |
TGCTTGTGCCAAATTCATGA+TGG | 0.555410 | 7_4:-62086920 | None:intergenic |
AGGAAGCTGTGTGATCTGTC+TGG | 0.558109 | 7_4:+62087753 | Msa1169140:CDS |
TGATCCCAAGGCATATATTG+AGG | 0.560889 | 7_4:-62086443 | None:intergenic |
GGTGGAAACCTGAGAAAGAT+CGG | 0.561283 | 7_4:-62086648 | None:intergenic |
GCTCCCACATTCAGAGGTGC+CGG | 0.564424 | 7_4:+62086476 | Msa1169140:CDS |
TTAGGAACTACTTGCACTTG+GGG | 0.565937 | 7_4:+62087633 | Msa1169140:intron |
GCCAAGCTAGAATGGCTGAC+TGG | 0.566379 | 7_4:-62086626 | None:intergenic |
AGCTTCCTTCATCCTGACAT+TGG | 0.567313 | 7_4:-62087738 | None:intergenic |
TCTGACCAATGTCAGGATGA+AGG | 0.569783 | 7_4:+62087733 | Msa1169140:CDS |
CATATCACATCTACATCCAC+TGG | 0.570006 | 7_4:+62081832 | Msa1169140:CDS |
GCCATAGCAGCATGATCCCA+AGG | 0.571149 | 7_4:-62086455 | None:intergenic |
TTCTCTGGCCATGATTCTGG+AGG | 0.571448 | 7_4:-62086407 | None:intergenic |
TTCAGATAATGGGTTGCCCA+TGG | 0.575028 | 7_4:+62087073 | Msa1169140:CDS |
AGGTTTCCACCTCTCTGACA+AGG | 0.576938 | 7_4:+62086660 | Msa1169140:CDS |
CATAATTGGAAGAAGAAGGC+TGG | 0.577010 | 7_4:-62086226 | None:intergenic |
GATTTGTTGGAAGAATAAGA+AGG | 0.577408 | 7_4:-62080776 | None:intergenic |
TAAACAAATAACGCAACAAG+AGG | 0.577662 | 7_4:-62080712 | None:intergenic |
CATCACAAGAGGAAGAGCCC+TGG | 0.578445 | 7_4:+62086311 | Msa1169140:CDS |
TACTTCAATATTGGGGCCTG+AGG | 0.578474 | 7_4:-62086099 | None:intergenic |
GCTCCAATCCCTTGTCAGAG+AGG | 0.579922 | 7_4:-62086669 | None:intergenic |
TAGTGAAAGATATAGATCAC+TGG | 0.580578 | 7_4:+62087184 | Msa1169140:CDS |
CAAATCTTCTGCTTTGCCTG+AGG | 0.580742 | 7_4:+62087974 | Msa1169140:CDS |
CTTACGAATCGGTGAAGAAG+CGG | 0.581234 | 7_4:-62080871 | None:intergenic |
CCAAGGCTATTGAACACTGT+TGG | 0.581250 | 7_4:+62087122 | Msa1169140:CDS |
AATGGAAGAATGTTATTACC+AGG | 0.583487 | 7_4:+62086713 | Msa1169140:CDS |
CTCATTGGAACGCCAACACA+AGG | 0.584043 | 7_4:+62086060 | Msa1169140:CDS |
GAGACCGGCACCTCTGAATG+TGG | 0.584262 | 7_4:-62086480 | None:intergenic |
GAACACGCAACGCAAGAAGA+AGG | 0.584314 | 7_4:-62080815 | None:intergenic |
CATTGATAACATGAGCTATG+AGG | 0.584500 | 7_4:+62087533 | Msa1169140:CDS |
AGTAATGCTACTGTAGATGT+TGG | 0.586072 | 7_4:+62086891 | Msa1169140:CDS |
TTGATAAATGGGTCCTACAC+AGG | 0.593605 | 7_4:-62086568 | None:intergenic |
TGAAGGGTGAGAGTTCTGTA+AGG | 0.594924 | 7_4:+62086507 | Msa1169140:CDS |
AAGCTAGAATGGCTGACTGG+TGG | 0.595375 | 7_4:-62086623 | None:intergenic |
CAGAGGATGATAATCTTGCA+TGG | 0.596174 | 7_4:-62087223 | None:intergenic |
CTGCCTCTCTCATAGACTGA+AGG | 0.597914 | 7_4:-62086338 | None:intergenic |
CAGCAGCAGCATTTCCAACA+GGG | 0.598832 | 7_4:-62086857 | None:intergenic |
AACGCAAGAAGAAGGTGTGA+AGG | 0.601018 | 7_4:-62080807 | None:intergenic |
CATAGACTGAAGGAATTCCA+GGG | 0.602796 | 7_4:-62086328 | None:intergenic |
TGTTGGCGTTCCAATGAGAA+GGG | 0.603138 | 7_4:-62086055 | None:intergenic |
AGAAGCCCTATAAGCTGGAG+TGG | 0.603284 | 7_4:-62087021 | None:intergenic |
ATATCCATTTGACCTTGTGT+TGG | 0.606880 | 7_4:-62086072 | None:intergenic |
GTGGACGAGCGCATCACAAG+AGG | 0.609054 | 7_4:+62086300 | Msa1169140:CDS |
CCAATCCCTTGTCAGAGAGG+TGG | 0.609738 | 7_4:-62086666 | None:intergenic |
GTGTCCAATTGATGAGGAGG+TGG | 0.629316 | 7_4:-62086122 | None:intergenic |
ATGGGCAACCCATTATCTGA+AGG | 0.632951 | 7_4:-62087071 | None:intergenic |
AGACCGGCACCTCTGAATGT+GGG | 0.633763 | 7_4:-62086479 | None:intergenic |
TCAGCACAGAGAAATGAGGA+TGG | 0.634269 | 7_4:+62087509 | Msa1169140:CDS |
TTGATCAGCACAGAGAAATG+AGG | 0.637135 | 7_4:+62087505 | Msa1169140:CDS |
AGGATTGGCCAAGTGAACAC+AGG | 0.638000 | 7_4:+62087658 | Msa1169140:CDS |
GTTACTCTTCTAGACATCCA+AGG | 0.639016 | 7_4:+62087105 | Msa1169140:CDS |
GAGTAACCTTCAGCTACCAT+GGG | 0.639938 | 7_4:-62087089 | None:intergenic |
ACGCAAGAAGAAGGTGTGAA+GGG | 0.640279 | 7_4:-62080806 | None:intergenic |
GGGTTGCCCATGGTAGCTGA+AGG | 0.644950 | 7_4:+62087083 | Msa1169140:CDS |
AATTTGACTCAGACTGCTAG+GGG | 0.648157 | 7_4:+62086972 | Msa1169140:CDS |
GGTGCCGGTCTCTCAATGAA+GGG | 0.649084 | 7_4:+62086491 | Msa1169140:CDS |
ATTCCAAATCAAGTGAAGAA+CGG | 0.650235 | 7_4:-62086541 | None:intergenic |
GAGTTGCAAGTGCAATTATG+GGG | 0.653357 | 7_4:+62085740 | Msa1169140:CDS |
AAGGAGACAATGTAATAAAG+CGG | 0.655623 | 7_4:-62080748 | None:intergenic |
ATTCCTTCAGTCTATGAGAG+AGG | 0.658453 | 7_4:+62086335 | Msa1169140:CDS |
ATGAGAGAGGCAGTTCAAGT+GGG | 0.661983 | 7_4:+62086348 | Msa1169140:CDS |
CCCGATGTGTCCAATTGATG+AGG | 0.668034 | 7_4:-62086128 | None:intergenic |
GATGTGTCCAATTGATGAGG+AGG | 0.670155 | 7_4:-62086125 | None:intergenic |
ACAGGAAGAGTACAAGAACA+TGG | 0.673250 | 7_4:+62087860 | Msa1169140:intron |
TATTGAACACTGTTGGCTGG+CGG | 0.676608 | 7_4:+62087129 | Msa1169140:CDS |
GATCAACATCATGTGAACCA+TGG | 0.679473 | 7_4:+62085835 | Msa1169140:CDS |
TGCAAGATTATCATCCTCTG+AGG | 0.680028 | 7_4:+62087226 | Msa1169140:CDS |
GGAACAGTGACAGAAATGGA+AGG | 0.681181 | 7_4:+62087150 | Msa1169140:CDS |
AGTGAACACAGGATTGTCTG+AGG | 0.684135 | 7_4:+62087669 | Msa1169140:CDS |
ATTCCTAGAACCATATAGTG+AGG | 0.695582 | 7_4:-62087478 | None:intergenic |
TATACTGACCGGTACCTCAG+AGG | 0.696485 | 7_4:-62087240 | None:intergenic |
GAGGTGGTACTTCAATATTG+GGG | 0.743287 | 7_4:-62086106 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAGTAATATAGTTATTTATT+AGG | + | chr7_4:62081735-62081754 | Msa1169140:intron | 10.0% |
!!! | AAAATGTATTCATTTATTTT+GGG | + | chr7_4:62087426-62087445 | Msa1169140:intron | 10.0% |
!! | AATAATTGATAGAATAGAAT+CGG | - | chr7_4:62080911-62080930 | None:intergenic | 15.0% |
!!! | TATTACTTTTTATATACAAC+TGG | - | chr7_4:62081723-62081742 | None:intergenic | 15.0% |
!! | TGTATGATTTCAAATTATAA+AGG | - | chr7_4:62083377-62083396 | None:intergenic | 15.0% |
!!! | ACTGAATTTAATTTATGTTA+AGG | + | chr7_4:62083464-62083483 | Msa1169140:intron | 15.0% |
!!! | TAAGTTTATTTTGAATTATC+TGG | + | chr7_4:62083697-62083716 | Msa1169140:intron | 15.0% |
!!! | AAGTTTATTTTGAATTATCT+GGG | + | chr7_4:62083698-62083717 | Msa1169140:intron | 15.0% |
!! | TGAAAAAAGATATGTATATT+TGG | - | chr7_4:62084162-62084181 | None:intergenic | 15.0% |
!!! | ATATACATATCTTTTTTCAA+AGG | + | chr7_4:62084163-62084182 | Msa1169140:intron | 15.0% |
!!! | TATACATATCTTTTTTCAAA+GGG | + | chr7_4:62084164-62084183 | Msa1169140:intron | 15.0% |
!!! | AAACCTTTTTGTATAAAAAT+AGG | - | chr7_4:62084239-62084258 | None:intergenic | 15.0% |
!! | TTGAGATTTAAATTATATGA+TGG | - | chr7_4:62084587-62084606 | None:intergenic | 15.0% |
!! | ATGATTATCCATTATTATTA+AGG | + | chr7_4:62084741-62084760 | Msa1169140:intron | 15.0% |
!! | ATGATAAATTTAAGGAATTA+TGG | + | chr7_4:62085091-62085110 | Msa1169140:intron | 15.0% |
!!! | ATTTTAGAAGTAAAAGTTAA+TGG | - | chr7_4:62085183-62085202 | None:intergenic | 15.0% |
!!! | ATTACACTATTTTTTACTAT+TGG | + | chr7_4:62085717-62085736 | Msa1169140:CDS | 15.0% |
!!! | TTACACTATTTTTTACTATT+GGG | + | chr7_4:62085718-62085737 | Msa1169140:CDS | 15.0% |
!! | ATTTAAATTTAACATTACCA+TGG | - | chr7_4:62085855-62085874 | None:intergenic | 15.0% |
!!! | CAAAATGTATTCATTTATTT+TGG | + | chr7_4:62087425-62087444 | Msa1169140:intron | 15.0% |
!!! | ATCTTAATTATTTTGATGAT+CGG | + | chr7_4:62087605-62087624 | Msa1169140:intron | 15.0% |
!! | AATAAATCATTATGAATGTA+GGG | - | chr7_4:62087787-62087806 | None:intergenic | 15.0% |
!! | AAATAAATCATTATGAATGT+AGG | - | chr7_4:62087788-62087807 | None:intergenic | 15.0% |
!!! | TTTTCTCTTTCTTTCTTTTT+TGG | + | chr7_4:62080945-62080964 | Msa1169140:intron | 20.0% |
!!! | TCATTTTCTCAAATTATTAC+CGG | - | chr7_4:62081225-62081244 | None:intergenic | 20.0% |
!! | TTATATTACAAAAAAAGGCA+GGG | - | chr7_4:62081902-62081921 | None:intergenic | 20.0% |
!! | ATTATATTACAAAAAAAGGC+AGG | - | chr7_4:62081903-62081922 | None:intergenic | 20.0% |
!! | CATTTGAATCTTAGTTTAAT+GGG | + | chr7_4:62082132-62082151 | Msa1169140:intron | 20.0% |
!! | ATTTGAATCTTAGTTTAATG+GGG | + | chr7_4:62082133-62082152 | Msa1169140:intron | 20.0% |
!!! | TGTTTTAATCGTTAATTTTC+TGG | + | chr7_4:62083218-62083237 | Msa1169140:intron | 20.0% |
!! | TAAAAGGAAAAATTTCTACA+TGG | + | chr7_4:62083241-62083260 | Msa1169140:intron | 20.0% |
!!! | TTTTTGAACTATTTAGTGTT+TGG | + | chr7_4:62083415-62083434 | Msa1169140:intron | 20.0% |
!! | AGATCATTAGTTATTGAAAA+CGG | - | chr7_4:62083526-62083545 | None:intergenic | 20.0% |
!!! | ATGCTCAAGATTATTTTTTT+TGG | + | chr7_4:62083611-62083630 | Msa1169140:intron | 20.0% |
!! | ACTATACATTAATGTAGATT+TGG | + | chr7_4:62083831-62083850 | Msa1169140:intron | 20.0% |
!! | ATCAAATACTAGCATTAATA+TGG | - | chr7_4:62084008-62084027 | None:intergenic | 20.0% |
!! | ATATGTATATTTGGAAGAAA+AGG | - | chr7_4:62084153-62084172 | None:intergenic | 20.0% |
!!! | ATACATATCTTTTTTCAAAG+GGG | + | chr7_4:62084165-62084184 | Msa1169140:intron | 20.0% |
!!! | AGATTTGACTTAATAAAAAG+AGG | - | chr7_4:62084525-62084544 | None:intergenic | 20.0% |
!! | ATTTAGGTGATATGTTTAAT+TGG | - | chr7_4:62085017-62085036 | None:intergenic | 20.0% |
!! | CTTTATGAATATTACGATTT+AGG | - | chr7_4:62085033-62085052 | None:intergenic | 20.0% |
!! | AGTCTCTTATGATAAATTTA+AGG | + | chr7_4:62085083-62085102 | Msa1169140:intron | 20.0% |
!! | AATGCATTATCTAAAAACTT+TGG | - | chr7_4:62085403-62085422 | None:intergenic | 20.0% |
!!! | AATCCACAAAATTTTATAAG+AGG | - | chr7_4:62085622-62085641 | None:intergenic | 20.0% |
!! | AATAATGCTAATTGTAACAA+AGG | - | chr7_4:62087582-62087601 | None:intergenic | 20.0% |
!!! | ATGATTTATTTTTCTGTCTT+TGG | + | chr7_4:62087797-62087816 | Msa1169140:intron | 20.0% |
!! | ATCTCATTTGTACATATATT+TGG | + | chr7_4:62088033-62088052 | Msa1169140:three_prime_UTR | 20.0% |
!! | AAATTTTTATTGCATTGCAC+CGG | - | chr7_4:62080659-62080678 | None:intergenic | 25.0% |
! | AATAAACCATTAGATTTCCT+GGG | - | chr7_4:62081147-62081166 | None:intergenic | 25.0% |
! | TAATAAACCATTAGATTTCC+TGG | - | chr7_4:62081148-62081167 | None:intergenic | 25.0% |
! | GCTTGTTTATTTGTTCATAA+AGG | + | chr7_4:62081346-62081365 | Msa1169140:intron | 25.0% |
!! | GGAATGGGAAAATATTATTT+TGG | + | chr7_4:62081632-62081651 | Msa1169140:intron | 25.0% |
! | AGGTATTCTTAGAATCAATT+AGG | + | chr7_4:62081755-62081774 | Msa1169140:intron | 25.0% |
! | TAGAATCAATTAGGTTTAGA+TGG | + | chr7_4:62081764-62081783 | Msa1169140:intron | 25.0% |
! | AGAATCAATTAGGTTTAGAT+GGG | + | chr7_4:62081765-62081784 | Msa1169140:intron | 25.0% |
!! | TTGTTGTCATTTGCAAAAAA+TGG | + | chr7_4:62082005-62082024 | Msa1169140:intron | 25.0% |
! | CCATTAAACTAAGATTCAAA+TGG | - | chr7_4:62082134-62082153 | None:intergenic | 25.0% |
! | CCATTTGAATCTTAGTTTAA+TGG | + | chr7_4:62082131-62082150 | Msa1169140:intron | 25.0% |
! | TTTGAATCTTAGTTTAATGG+GGG | + | chr7_4:62082134-62082153 | Msa1169140:intron | 25.0% |
! | TATTAGTTGGAAGATTGTAT+AGG | + | chr7_4:62082297-62082316 | Msa1169140:intron | 25.0% |
! | ATGATATGTATATAGTTCCA+CGG | - | chr7_4:62082515-62082534 | None:intergenic | 25.0% |
! | AATTCGTATTGTTCTTAGTT+TGG | + | chr7_4:62082626-62082645 | Msa1169140:intron | 25.0% |
! | ATTCGTATTGTTCTTAGTTT+GGG | + | chr7_4:62082627-62082646 | Msa1169140:intron | 25.0% |
! | TCTTCACTTATGATTTCTAA+AGG | + | chr7_4:62082988-62083007 | Msa1169140:intron | 25.0% |
! | TAAGGAGAGAAGTTTAAATT+AGG | - | chr7_4:62083114-62083133 | None:intergenic | 25.0% |
! | TGAAGAAAATTGATTAGACT+TGG | + | chr7_4:62083183-62083202 | Msa1169140:intron | 25.0% |
! | AAATTGATTAGACTTGGATA+TGG | + | chr7_4:62083189-62083208 | Msa1169140:intron | 25.0% |
! | AATTGATTAGACTTGGATAT+GGG | + | chr7_4:62083190-62083209 | Msa1169140:intron | 25.0% |
!!! | ATCGTTAATTTTCTGGTAAA+AGG | + | chr7_4:62083225-62083244 | Msa1169140:intron | 25.0% |
!! | TTTACACTAAAATGATGGAA+AGG | - | chr7_4:62083292-62083311 | None:intergenic | 25.0% |
! | ATCATTAGTTATTGAAAACG+GGG | - | chr7_4:62083524-62083543 | None:intergenic | 25.0% |
! | GATCATTAGTTATTGAAAAC+GGG | - | chr7_4:62083525-62083544 | None:intergenic | 25.0% |
! | TAAACTTATTCACAAAAGCT+TGG | - | chr7_4:62083685-62083704 | None:intergenic | 25.0% |
! | AACAAAAAAAATAGAGTGAC+AGG | - | chr7_4:62083970-62083989 | None:intergenic | 25.0% |
!!! | TGTCACTCTATTTTTTTTGT+TGG | + | chr7_4:62083969-62083988 | Msa1169140:intron | 25.0% |
! | AGGAAAAAATACAGTGAAAT+AGG | - | chr7_4:62084216-62084235 | None:intergenic | 25.0% |
!! | CCTTTTTGTATAAAAATAGG+AGG | - | chr7_4:62084236-62084255 | None:intergenic | 25.0% |
!!! | CCTCCTATTTTTATACAAAA+AGG | + | chr7_4:62084233-62084252 | Msa1169140:intron | 25.0% |
!! | ATTTGTCTTTTTCTTTTTGC+TGG | + | chr7_4:62084270-62084289 | Msa1169140:intron | 25.0% |
!! | TGTTTACTGATTAGATTAGA+AGG | + | chr7_4:62084338-62084357 | Msa1169140:intron | 25.0% |
! | GCACAATTAATTATCTTGTT+CGG | + | chr7_4:62084402-62084421 | Msa1169140:intron | 25.0% |
! | TTGACTTAATAAAAAGAGGA+GGG | - | chr7_4:62084521-62084540 | None:intergenic | 25.0% |
!! | TTTGACTTAATAAAAAGAGG+AGG | - | chr7_4:62084522-62084541 | None:intergenic | 25.0% |
! | TGCTTCCATTATTAAAAACT+TGG | + | chr7_4:62084552-62084571 | Msa1169140:intron | 25.0% |
!! | TCACTCCAAGTTTTTAATAA+TGG | - | chr7_4:62084560-62084579 | None:intergenic | 25.0% |
! | ATTATTAAAAACTTGGAGTG+AGG | + | chr7_4:62084559-62084578 | Msa1169140:intron | 25.0% |
!! | TTCAAGTTAGTGACTTATTT+GGG | + | chr7_4:62084715-62084734 | Msa1169140:intron | 25.0% |
! | TCAAGTCTCCTTAATAATAA+TGG | - | chr7_4:62084752-62084771 | None:intergenic | 25.0% |
! | AATTATTTGTGGAAGATCAA+AGG | - | chr7_4:62084819-62084838 | None:intergenic | 25.0% |
! | AATCAAGGTTTAAAAAAGCT+TGG | - | chr7_4:62084933-62084952 | None:intergenic | 25.0% |
! | AAAAATTGCATGCAAAATCA+AGG | - | chr7_4:62084948-62084967 | None:intergenic | 25.0% |
!!! | ACTTCTAAAATTCTACCTTT+TGG | + | chr7_4:62085192-62085211 | Msa1169140:intron | 25.0% |
!!! | CTTCTAAAATTCTACCTTTT+GGG | + | chr7_4:62085193-62085212 | Msa1169140:intron | 25.0% |
! | TACACATATTTGTATGCATA+TGG | + | chr7_4:62085243-62085262 | Msa1169140:intron | 25.0% |
! | ACACATATTTGTATGCATAT+GGG | + | chr7_4:62085244-62085263 | Msa1169140:intron | 25.0% |
! | TTCGTTCAATATGAGTAATA+TGG | - | chr7_4:62085950-62085969 | None:intergenic | 25.0% |
!!! | TGGTTTTATTGATCTTACAA+TGG | + | chr7_4:62086274-62086293 | Msa1169140:CDS | 25.0% |
!!! | GGTTTTATTGATCTTACAAT+GGG | + | chr7_4:62086275-62086294 | Msa1169140:CDS | 25.0% |
!!! | GTTTTATTGATCTTACAATG+GGG | + | chr7_4:62086276-62086295 | Msa1169140:CDS | 25.0% |
! | ATATATTGAGGATCCATATT+TGG | - | chr7_4:62086434-62086453 | None:intergenic | 25.0% |
! | AATAACATTCTTCCATTAGT+AGG | - | chr7_4:62086710-62086729 | None:intergenic | 25.0% |
!!! | TATATAGTTAGCCTTGAATA+GGG | + | chr7_4:62087290-62087309 | Msa1169140:intron | 25.0% |
! | TGCAAAAAAAAATACTACAG+CGG | - | chr7_4:62087353-62087372 | None:intergenic | 25.0% |
!!! | TTCATTTATTTTGGGTTTTC+AGG | + | chr7_4:62087434-62087453 | Msa1169140:intron | 25.0% |
!!! | TCATTTATTTTGGGTTTTCA+GGG | + | chr7_4:62087435-62087454 | Msa1169140:intron | 25.0% |
!! | TAGTTTTTGTTGACAATTAC+AGG | + | chr7_4:62087842-62087861 | Msa1169140:intron | 25.0% |
! | AAATCGTTGTGAATTTGAAA+CGG | + | chr7_4:62088166-62088185 | Msa1169140:three_prime_UTR | 25.0% |
TAAACAAATAACGCAACAAG+AGG | - | chr7_4:62080715-62080734 | None:intergenic | 30.0% | |
AAGGAGACAATGTAATAAAG+CGG | - | chr7_4:62080751-62080770 | None:intergenic | 30.0% | |
!! | GATTTGTTGGAAGAATAAGA+AGG | - | chr7_4:62080779-62080798 | None:intergenic | 30.0% |
GAATAGAATCGGAAAGATAA+AGG | - | chr7_4:62080900-62080919 | None:intergenic | 30.0% | |
! | GCTTGATTGATTGAGATTTT+TGG | + | chr7_4:62081117-62081136 | Msa1169140:intron | 30.0% |
ACCAAACATACATACAAAGA+TGG | - | chr7_4:62081324-62081343 | None:intergenic | 30.0% | |
ACCCAATTAGCAATTGTAAT+GGG | - | chr7_4:62081420-62081439 | None:intergenic | 30.0% | |
TAGCAAAATCAGCCAAAATT+GGG | - | chr7_4:62081487-62081506 | None:intergenic | 30.0% | |
ATAGCAAAATCAGCCAAAAT+TGG | - | chr7_4:62081488-62081507 | None:intergenic | 30.0% | |
!! | TTCATCCATTGACTTGTATA+TGG | + | chr7_4:62081611-62081630 | Msa1169140:intron | 30.0% |
!! | CATTGACTTGTATATGGAAT+GGG | + | chr7_4:62081617-62081636 | Msa1169140:intron | 30.0% |
!!! | ATGGGTTTTTTTTATCATGC+AGG | + | chr7_4:62081783-62081802 | Msa1169140:intron | 30.0% |
! | TTGAGACAATGTAATGGAAT+GGG | - | chr7_4:62082091-62082110 | None:intergenic | 30.0% |
! | ATTGAGACAATGTAATGGAA+TGG | - | chr7_4:62082092-62082111 | None:intergenic | 30.0% |
ATCATCACTTATGAGTTCTA+AGG | - | chr7_4:62082163-62082182 | None:intergenic | 30.0% | |
GAACTCATAAGTGATGATAT+TGG | + | chr7_4:62082165-62082184 | Msa1169140:intron | 30.0% | |
TCTTCATCCTATATGAAAAG+TGG | - | chr7_4:62082253-62082272 | None:intergenic | 30.0% | |
ACCAAAGAATCTCTATTAGT+TGG | + | chr7_4:62082284-62082303 | Msa1169140:intron | 30.0% | |
TCCAACTAATAGAGATTCTT+TGG | - | chr7_4:62082288-62082307 | None:intergenic | 30.0% | |
GTTGGATGACAAATATCTAA+AGG | - | chr7_4:62082344-62082363 | None:intergenic | 30.0% | |
TATCTCCAGCATAATTACTA+GGG | - | chr7_4:62082411-62082430 | None:intergenic | 30.0% | |
!! | TGTTACAGGAATTTTAAGGA+GGG | + | chr7_4:62082489-62082508 | Msa1169140:intron | 30.0% |
ATATGACAATCGTACATACA+GGG | - | chr7_4:62082709-62082728 | None:intergenic | 30.0% | |
TATATGACAATCGTACATAC+AGG | - | chr7_4:62082710-62082729 | None:intergenic | 30.0% | |
AGAAACTGCAACAACATAAA+GGG | - | chr7_4:62082829-62082848 | None:intergenic | 30.0% | |
TCAAATAATTCAACATCCAG+TGG | + | chr7_4:62082876-62082895 | Msa1169140:intron | 30.0% | |
!! | ATGATGCTATATTTTGGACT+TGG | + | chr7_4:62082920-62082939 | Msa1169140:intron | 30.0% |
! | CTTATGATTTCTAAAGGTTG+TGG | + | chr7_4:62082994-62083013 | Msa1169140:intron | 30.0% |
TTAAACTTCTCTCCTTATTG+TGG | + | chr7_4:62083117-62083136 | Msa1169140:intron | 30.0% | |
TAAACTTCTCTCCTTATTGT+GGG | + | chr7_4:62083118-62083137 | Msa1169140:intron | 30.0% | |
!! | TTGGCTTTACACTAAAATGA+TGG | - | chr7_4:62083297-62083316 | None:intergenic | 30.0% |
AGAAAATAATGCAGATTGAC+AGG | - | chr7_4:62083495-62083514 | None:intergenic | 30.0% | |
AATGATCTGATAAAGCTTCA+TGG | + | chr7_4:62083538-62083557 | Msa1169140:intron | 30.0% | |
ATATATAGAAATTGTGGGAG+AGG | - | chr7_4:62083859-62083878 | None:intergenic | 30.0% | |
GAGGGATATATAGAAATTGT+GGG | - | chr7_4:62083864-62083883 | None:intergenic | 30.0% | |
AGATAGAAAACAGATGTTGT+AGG | - | chr7_4:62083886-62083905 | None:intergenic | 30.0% | |
TACTAGCATTAATATGGACT+AGG | - | chr7_4:62084002-62084021 | None:intergenic | 30.0% | |
TTGGAAGAAAAGGAAAATGT+AGG | - | chr7_4:62084143-62084162 | None:intergenic | 30.0% | |
GGATTTACTTAATGTATGTG+TGG | + | chr7_4:62084299-62084318 | Msa1169140:intron | 30.0% | |
TTAATGTATGTGTGGTTCTT+TGG | + | chr7_4:62084307-62084326 | Msa1169140:intron | 30.0% | |
CAAGATAATTAATTGTGCAG+AGG | - | chr7_4:62084400-62084419 | None:intergenic | 30.0% | |
TTAATAAAAAGAGGAGGGAT+TGG | - | chr7_4:62084516-62084535 | None:intergenic | 30.0% | |
TTTCTGTATCAGTGGAAATA+GGG | + | chr7_4:62084677-62084696 | Msa1169140:intron | 30.0% | |
! | CTTCAAGTTAGTGACTTATT+TGG | + | chr7_4:62084714-62084733 | Msa1169140:intron | 30.0% |
TATTATTAAGGAGACTTGAG+TGG | + | chr7_4:62084753-62084772 | Msa1169140:intron | 30.0% | |
! | TATGGTCTAGTTTAGTAGAT+TGG | + | chr7_4:62084784-62084803 | Msa1169140:intron | 30.0% |
! | AAGGAATTATGGTAATGATG+TGG | + | chr7_4:62085102-62085121 | Msa1169140:intron | 30.0% |
CAAATATGTGTAAAGAATGC+TGG | - | chr7_4:62085235-62085254 | None:intergenic | 30.0% | |
ACTCATGGCTATACAATATT+TGG | + | chr7_4:62085340-62085359 | Msa1169140:intron | 30.0% | |
! | TCTTGCATAATCATTTTGAG+TGG | + | chr7_4:62085430-62085449 | Msa1169140:intron | 30.0% |
ATTTGTATGAGCAATATGTG+TGG | + | chr7_4:62085453-62085472 | Msa1169140:intron | 30.0% | |
!! | AATATGTGTGGTATTGGTAT+TGG | + | chr7_4:62085465-62085484 | Msa1169140:intron | 30.0% |
! | TATGTATCACTGATAATGCA+GGG | + | chr7_4:62085488-62085507 | Msa1169140:intron | 30.0% |
ATGATTCCAACATAGTCTAT+TGG | - | chr7_4:62085524-62085543 | None:intergenic | 30.0% | |
! | TGGCCTCTTATAAAATTTTG+TGG | + | chr7_4:62085616-62085635 | Msa1169140:intron | 30.0% |
TCAGCATATTATTCCAATTC+GGG | - | chr7_4:62085813-62085832 | None:intergenic | 30.0% | |
GTCAGCATATTATTCCAATT+CGG | - | chr7_4:62085814-62085833 | None:intergenic | 30.0% | |
AGTTATTTGCAACGGAAAAA+CGG | - | chr7_4:62085910-62085929 | None:intergenic | 30.0% | |
!! | TGGTTCTTTTATTTATCCTG+TGG | + | chr7_4:62086004-62086023 | Msa1169140:CDS | 30.0% |
! | TCTATAGACATATTTTCCAC+AGG | - | chr7_4:62086023-62086042 | None:intergenic | 30.0% |
ACATTTATTTCCCTTCTCAT+TGG | + | chr7_4:62086045-62086064 | Msa1169140:CDS | 30.0% | |
! | TTTTCAGATACTGCAAAGAA+AGG | - | chr7_4:62086197-62086216 | None:intergenic | 30.0% |
AAATGCTTGTCTGTCATAAT+TGG | - | chr7_4:62086243-62086262 | None:intergenic | 30.0% | |
ATTCCAAATCAAGTGAAGAA+CGG | - | chr7_4:62086544-62086563 | None:intergenic | 30.0% | |
TGAATGGCTACTTGATAAAT+GGG | - | chr7_4:62086582-62086601 | None:intergenic | 30.0% | |
AATGGAAGAATGTTATTACC+AGG | + | chr7_4:62086713-62086732 | Msa1169140:CDS | 30.0% | |
ATTGTTTAGACATACAAGTG+AGG | - | chr7_4:62086787-62086806 | None:intergenic | 30.0% | |
! | AATACAGATGCTAGTACTTT+TGG | + | chr7_4:62086816-62086835 | Msa1169140:intron | 30.0% |
TAGTGAAAGATATAGATCAC+TGG | + | chr7_4:62087184-62087203 | Msa1169140:CDS | 30.0% | |
!! | GTATATAGTTAGCCTTGAAT+AGG | + | chr7_4:62087289-62087308 | Msa1169140:intron | 30.0% |
! | ATTTTGAGCCAATAGAAGTA+AGG | - | chr7_4:62087411-62087430 | None:intergenic | 30.0% |
!! | TTTTGATGATCGGTTTCTTT+AGG | + | chr7_4:62087615-62087634 | Msa1169140:intron | 30.0% |
! | ACTTTTTAATGCAGCTTACA+TGG | - | chr7_4:62087923-62087942 | None:intergenic | 30.0% |
ATGTAAGCTGCATTAAAAAG+TGG | + | chr7_4:62087922-62087941 | Msa1169140:CDS | 30.0% | |
TCAAATTCACAACGATTTCT+AGG | - | chr7_4:62088164-62088183 | None:intergenic | 30.0% | |
GAGCAGTTAACGCATTAAAT+CGG | + | chr7_4:62080630-62080649 | Msa1169140:five_prime_UTR | 35.0% | |
TAACGCATTAAATCGGTAAC+CGG | + | chr7_4:62080637-62080656 | Msa1169140:five_prime_UTR | 35.0% | |
GAAGAATAAGAAGGAGAAGA+AGG | - | chr7_4:62080770-62080789 | None:intergenic | 35.0% | |
!! | GAAGGGTTTGTTTGATTTGT+TGG | - | chr7_4:62080792-62080811 | None:intergenic | 35.0% |
GATAAAGGTGACTTACGAAT+CGG | - | chr7_4:62080885-62080904 | None:intergenic | 35.0% | |
CAATCAAGCAAACAAGCAAT+CGG | - | chr7_4:62081106-62081125 | None:intergenic | 35.0% | |
!! | TTGAGATTTTTGGATTTCCC+AGG | + | chr7_4:62081127-62081146 | Msa1169140:intron | 35.0% |
GCCATCTTTGTATGTATGTT+TGG | + | chr7_4:62081320-62081339 | Msa1169140:intron | 35.0% | |
AAGGAATCTCATTGTGTTAG+TGG | + | chr7_4:62081365-62081384 | Msa1169140:intron | 35.0% | |
AGGAATCTCATTGTGTTAGT+GGG | + | chr7_4:62081366-62081385 | Msa1169140:intron | 35.0% | |
CCCAATTAGCAATTGTAATG+GGG | - | chr7_4:62081419-62081438 | None:intergenic | 35.0% | |
CCCCATTACAATTGCTAATT+GGG | + | chr7_4:62081416-62081435 | Msa1169140:intron | 35.0% | |
CACCCAATTAGCAATTGTAA+TGG | - | chr7_4:62081421-62081440 | None:intergenic | 35.0% | |
!! | TGATTTTGCTATGTGATGGA+AGG | + | chr7_4:62081496-62081515 | Msa1169140:intron | 35.0% |
CCATTCCATATACAAGTCAA+TGG | - | chr7_4:62081619-62081638 | None:intergenic | 35.0% | |
!! | CCATTGACTTGTATATGGAA+TGG | + | chr7_4:62081616-62081635 | Msa1169140:intron | 35.0% |
! | CTTTTAATGCGTAAACCCAA+AGG | - | chr7_4:62081978-62081997 | None:intergenic | 35.0% |
CTGCAATTGAGACAATGTAA+TGG | - | chr7_4:62082097-62082116 | None:intergenic | 35.0% | |
TACATTGTCTCAATTGCAGA+TGG | + | chr7_4:62082098-62082117 | Msa1169140:intron | 35.0% | |
! | TTGGCATGTTCTATTTTCTC+AGG | + | chr7_4:62082184-62082203 | Msa1169140:intron | 35.0% |
ATACATCCATCTTCTGTGAT+TGG | + | chr7_4:62082364-62082383 | Msa1169140:intron | 35.0% | |
AAGAATCCAATCACAGAAGA+TGG | - | chr7_4:62082373-62082392 | None:intergenic | 35.0% | |
TCTGTGATTGGATTCTTGTT+TGG | + | chr7_4:62082376-62082395 | Msa1169140:intron | 35.0% | |
GTATCTCCAGCATAATTACT+AGG | - | chr7_4:62082412-62082431 | None:intergenic | 35.0% | |
TAATTATGCTGGAGATACTG+TGG | + | chr7_4:62082414-62082433 | Msa1169140:intron | 35.0% | |
! | AGTGATGCAAGATGTTGATT+TGG | + | chr7_4:62082464-62082483 | Msa1169140:intron | 35.0% |
!! | GTGATGCAAGATGTTGATTT+GGG | + | chr7_4:62082465-62082484 | Msa1169140:intron | 35.0% |
!! | CTGTTACAGGAATTTTAAGG+AGG | + | chr7_4:62082488-62082507 | Msa1169140:intron | 35.0% |
TTGTTCTAGTATGTGCTTTG+AGG | + | chr7_4:62082534-62082553 | Msa1169140:intron | 35.0% | |
!! | TGCTTTGAGGTTCTAAGATA+TGG | + | chr7_4:62082547-62082566 | Msa1169140:intron | 35.0% |
!! | AGGTTCTAAGATATGGATGT+TGG | + | chr7_4:62082554-62082573 | Msa1169140:intron | 35.0% |
ACTAGACCATTAACAAGTCA+CGG | - | chr7_4:62082604-62082623 | None:intergenic | 35.0% | |
CCATCAATGGTATGTACTAA+AGG | - | chr7_4:62082765-62082784 | None:intergenic | 35.0% | |
CCTTTAGTACATACCATTGA+TGG | + | chr7_4:62082762-62082781 | Msa1169140:intron | 35.0% | |
CAGAAACTGCAACAACATAA+AGG | - | chr7_4:62082830-62082849 | None:intergenic | 35.0% | |
ATAATTCAACATCCAGTGGT+TGG | + | chr7_4:62082880-62082899 | Msa1169140:intron | 35.0% | |
TAATTCAACATCCAGTGGTT+GGG | + | chr7_4:62082881-62082900 | Msa1169140:intron | 35.0% | |
! | TGCTGGATGATGCTATATTT+TGG | + | chr7_4:62082914-62082933 | Msa1169140:intron | 35.0% |
ATGAAGTGAAACTAGTGTCA+AGG | + | chr7_4:62083018-62083037 | Msa1169140:intron | 35.0% | |
AAACTTCTCTCCTTATTGTG+GGG | + | chr7_4:62083119-62083138 | Msa1169140:intron | 35.0% | |
! | AAAATGATGGAAAGGCTTCA+AGG | - | chr7_4:62083284-62083303 | None:intergenic | 35.0% |
TACACATTCTTGTGGCATAT+TGG | - | chr7_4:62083316-62083335 | None:intergenic | 35.0% | |
AATATGCCACAAGAATGTGT+AGG | + | chr7_4:62083315-62083334 | Msa1169140:intron | 35.0% | |
TACATTCCTACACATTCTTG+TGG | - | chr7_4:62083324-62083343 | None:intergenic | 35.0% | |
AAGTGAGTTGTCAGTATGTT+TGG | + | chr7_4:62083563-62083582 | Msa1169140:intron | 35.0% | |
TGAATTATCTGGGCATATCA+AGG | + | chr7_4:62083708-62083727 | Msa1169140:intron | 35.0% | |
GAATTATCTGGGCATATCAA+GGG | + | chr7_4:62083709-62083728 | Msa1169140:intron | 35.0% | |
GGAGGGATATATAGAAATTG+TGG | - | chr7_4:62083865-62083884 | None:intergenic | 35.0% | |
AGAAAACAGATGTTGTAGGA+GGG | - | chr7_4:62083882-62083901 | None:intergenic | 35.0% | |
TAGAAAACAGATGTTGTAGG+AGG | - | chr7_4:62083883-62083902 | None:intergenic | 35.0% | |
TGAGGTAAAATGAGGTGATT+AGG | - | chr7_4:62083937-62083956 | None:intergenic | 35.0% | |
AGAGAAGATGAGGTAAAATG+AGG | - | chr7_4:62083945-62083964 | None:intergenic | 35.0% | |
CTTCTAGACAAAATGTTGAC+AGG | - | chr7_4:62084072-62084091 | None:intergenic | 35.0% | |
CAGAACAGAGTACGAAAAAA+CGG | - | chr7_4:62084099-62084118 | None:intergenic | 35.0% | |
!! | TTTTTCTTTTTGCTGGTCTC+TGG | + | chr7_4:62084277-62084296 | Msa1169140:intron | 35.0% |
!! | TTTTCTTTTTGCTGGTCTCT+GGG | + | chr7_4:62084278-62084297 | Msa1169140:intron | 35.0% |
TAATTATCTTGTTCGGATGC+AGG | + | chr7_4:62084409-62084428 | Msa1169140:intron | 35.0% | |
CTTTCTGTATCAGTGGAAAT+AGG | + | chr7_4:62084676-62084695 | Msa1169140:intron | 35.0% | |
AACTTGAAGCCAATATACTC+AGG | - | chr7_4:62084703-62084722 | None:intergenic | 35.0% | |
TAGTGTCAATGTCCTTTGAA+TGG | + | chr7_4:62084970-62084989 | Msa1169140:intron | 35.0% | |
! | TTATGGTAATGATGTGGAAG+CGG | + | chr7_4:62085108-62085127 | Msa1169140:intron | 35.0% |
TCTTACTATCACGAACTACA+AGG | - | chr7_4:62085159-62085178 | None:intergenic | 35.0% | |
ATCATCAGAGATATTTGTGC+AGG | - | chr7_4:62085300-62085319 | None:intergenic | 35.0% | |
ATGAGCAATATGTGTGGTAT+TGG | + | chr7_4:62085459-62085478 | Msa1169140:intron | 35.0% | |
! | GTATGTATCACTGATAATGC+AGG | + | chr7_4:62085487-62085506 | Msa1169140:intron | 35.0% |
!!! | TGAATGCTATTTTGCGTTGT+AGG | + | chr7_4:62085669-62085688 | Msa1169140:intron | 35.0% |
AATGCATCTCCAATGTTTGA+GGG | + | chr7_4:62085778-62085797 | Msa1169140:CDS | 35.0% | |
AGCAATGCAGTTATTTGCAA+CGG | - | chr7_4:62085918-62085937 | None:intergenic | 35.0% | |
ATATCCATTTGACCTTGTGT+TGG | - | chr7_4:62086075-62086094 | None:intergenic | 35.0% | |
CTGTCATAATTGGAAGAAGA+AGG | - | chr7_4:62086233-62086252 | None:intergenic | 35.0% | |
! | CAAGCATTTCATGTTGATAG+TGG | + | chr7_4:62086254-62086273 | Msa1169140:CDS | 35.0% |
AGAGTTCTGTAAGGAATGTT+AGG | + | chr7_4:62086516-62086535 | Msa1169140:CDS | 35.0% | |
GTGAATGGCTACTTGATAAA+TGG | - | chr7_4:62086583-62086602 | None:intergenic | 35.0% | |
TAGTAGGAGTTACGTTCATT+TGG | - | chr7_4:62086694-62086713 | None:intergenic | 35.0% | |
ATGAACGTAACTCCTACTAA+TGG | + | chr7_4:62086695-62086714 | Msa1169140:CDS | 35.0% | |
!! | GTTATTACCAGGTTAGTTTG+TGG | + | chr7_4:62086724-62086743 | Msa1169140:intron | 35.0% |
ATATTGACCACAAACTAACC+TGG | - | chr7_4:62086734-62086753 | None:intergenic | 35.0% | |
AGTTTGTGGTCAATATGTCT+TGG | + | chr7_4:62086738-62086757 | Msa1169140:intron | 35.0% | |
AGTAATGCTACTGTAGATGT+TGG | + | chr7_4:62086891-62086910 | Msa1169140:CDS | 35.0% | |
GAAAACTTTGAGCAGTAGTA+GGG | - | chr7_4:62086950-62086969 | None:intergenic | 35.0% | |
TGAAAACTTTGAGCAGTAGT+AGG | - | chr7_4:62086951-62086970 | None:intergenic | 35.0% | |
AAAATTTGACTCAGACTGCT+AGG | + | chr7_4:62086970-62086989 | Msa1169140:CDS | 35.0% | |
AAATTTGACTCAGACTGCTA+GGG | + | chr7_4:62086971-62086990 | Msa1169140:CDS | 35.0% | |
AAAACAAGCATCCCTATTCA+AGG | - | chr7_4:62087304-62087323 | None:intergenic | 35.0% | |
! | AGCTGCAAATTTGTTCTTTC+TGG | + | chr7_4:62087385-62087404 | Msa1169140:intron | 35.0% |
ATTCCTAGAACCATATAGTG+AGG | - | chr7_4:62087481-62087500 | None:intergenic | 35.0% | |
! | CATTGATAACATGAGCTATG+AGG | + | chr7_4:62087533-62087552 | Msa1169140:CDS | 35.0% |
TTTAGGAACTACTTGCACTT+GGG | + | chr7_4:62087632-62087651 | Msa1169140:intron | 35.0% | |
!! | TATTGTTTCTGTCACACACT+TGG | - | chr7_4:62087704-62087723 | None:intergenic | 35.0% |
AACAAAAACTAGTAAGCACC+TGG | - | chr7_4:62087833-62087852 | None:intergenic | 35.0% | |
AAAGCAGAAGATTTGCAGAT+AGG | - | chr7_4:62087969-62087988 | None:intergenic | 35.0% | |
TATTTATCCTTCCTATCCTC+AGG | - | chr7_4:62087993-62088012 | None:intergenic | 35.0% | |
TTGGACATCCTTCAAAATTG+AGG | + | chr7_4:62088052-62088071 | Msa1169140:three_prime_UTR | 35.0% | |
! | GTCTGTTTCCTCAATTTTGA+AGG | - | chr7_4:62088063-62088082 | None:intergenic | 35.0% |
! | TGCATGCCAATGAATTTGTT+TGG | + | chr7_4:62088116-62088135 | Msa1169140:three_prime_UTR | 35.0% |
TCGAAGCCAAACAAATTCAT+TGG | - | chr7_4:62088125-62088144 | None:intergenic | 35.0% | |
! | TTGTGAATTTGAAACGGTTC+TGG | + | chr7_4:62088172-62088191 | Msa1169140:three_prime_UTR | 35.0% |
GGATTTCCCAGGAAATCTAA+TGG | + | chr7_4:62081138-62081157 | Msa1169140:intron | 40.0% | |
! | ATTAGCAATTGTAATGGGGC+AGG | - | chr7_4:62081415-62081434 | None:intergenic | 40.0% |
GCCCCATTACAATTGCTAAT+TGG | + | chr7_4:62081415-62081434 | Msa1169140:intron | 40.0% | |
!! | TGGCTGATTTTGCTATGTGA+TGG | + | chr7_4:62081492-62081511 | Msa1169140:intron | 40.0% |
CATATCACATCTACATCCAC+TGG | + | chr7_4:62081832-62081851 | Msa1169140:CDS | 40.0% | |
! | TAATAATTTGCACCCGCCTT+TGG | + | chr7_4:62081959-62081978 | Msa1169140:intron | 40.0% |
! | AATAATTTGCACCCGCCTTT+GGG | + | chr7_4:62081960-62081979 | Msa1169140:intron | 40.0% |
TTAATGCGTAAACCCAAAGG+CGG | - | chr7_4:62081975-62081994 | None:intergenic | 40.0% | |
!! | TCAATTGCAGATGGTGTTGT+AGG | + | chr7_4:62082107-62082126 | Msa1169140:intron | 40.0% |
ATGATGATATGCCGCAGTTA+AGG | + | chr7_4:62082217-62082236 | Msa1169140:intron | 40.0% | |
!! | GGTGAGTCCACTTTTCATAT+AGG | + | chr7_4:62082243-62082262 | Msa1169140:intron | 40.0% |
AAGGACACAAACCATACGAA+CGG | - | chr7_4:62082325-62082344 | None:intergenic | 40.0% | |
CACAGAAGATGGATGTATGT+TGG | - | chr7_4:62082362-62082381 | None:intergenic | 40.0% | |
AGATGCCCTAGTAATTATGC+TGG | + | chr7_4:62082403-62082422 | Msa1169140:intron | 40.0% | |
CATCTTGCATCACTAGACAT+TGG | - | chr7_4:62082458-62082477 | None:intergenic | 40.0% | |
!! | ATGTTGATTTGGGCTGTTAC+AGG | + | chr7_4:62082475-62082494 | Msa1169140:intron | 40.0% |
! | GGGCTGTTACAGGAATTTTA+AGG | + | chr7_4:62082485-62082504 | Msa1169140:intron | 40.0% |
TAGACCATTAACAAGTCACG+GGG | - | chr7_4:62082602-62082621 | None:intergenic | 40.0% | |
CTAGACCATTAACAAGTCAC+GGG | - | chr7_4:62082603-62082622 | None:intergenic | 40.0% | |
! | TCTTAGTTTGGGATCTGCTT+TGG | + | chr7_4:62082638-62082657 | Msa1169140:intron | 40.0% |
CAGTAGACAAGTATGCACTA+CGG | + | chr7_4:62082737-62082756 | Msa1169140:intron | 40.0% | |
GCAGTTAATGTTAAGAGTGG+AGG | - | chr7_4:62082807-62082826 | None:intergenic | 40.0% | |
AGGGCAGTTAATGTTAAGAG+TGG | - | chr7_4:62082810-62082829 | None:intergenic | 40.0% | |
ACAAAACAAATCCCAACCAC+TGG | - | chr7_4:62082895-62082914 | None:intergenic | 40.0% | |
TCTAACCAGATTGCAGATGA+GGG | + | chr7_4:62083050-62083069 | Msa1169140:intron | 40.0% | |
AACTTCTCTCCTTATTGTGG+GGG | + | chr7_4:62083120-62083139 | Msa1169140:intron | 40.0% | |
AAGGCTTCAAGGAAGTAGTA+TGG | - | chr7_4:62083273-62083292 | None:intergenic | 40.0% | |
! | TTCCTTTGAGAAAGGAGAGA+AGG | - | chr7_4:62083752-62083771 | None:intergenic | 40.0% |
TAGGTTTACCAGGTGTTAGA+AGG | - | chr7_4:62084457-62084476 | None:intergenic | 40.0% | |
CTAACGCATCAGATATTACC+TGG | - | chr7_4:62084481-62084500 | None:intergenic | 40.0% | |
AAGAGGAGGGATTGGAAAAT+AGG | - | chr7_4:62084508-62084527 | None:intergenic | 40.0% | |
TAAGGCAAGAAAACAGAGGA+GGG | - | chr7_4:62084642-62084661 | None:intergenic | 40.0% | |
! | AGTCTAAGGCAAGAAAACAG+AGG | - | chr7_4:62084646-62084665 | None:intergenic | 40.0% |
AAAGAGCAGCTTCTAGTCTA+AGG | - | chr7_4:62084660-62084679 | None:intergenic | 40.0% | |
GAAATAGGGCCTGAGTATAT+TGG | + | chr7_4:62084691-62084710 | Msa1169140:intron | 40.0% | |
ACTTGAGTGGCTAGTGTTTA+TGG | + | chr7_4:62084766-62084785 | Msa1169140:intron | 40.0% | |
CTTCCACAAATAATTGCCTG+TGG | + | chr7_4:62084824-62084843 | Msa1169140:intron | 40.0% | |
TCACCACAGGCAATTATTTG+TGG | - | chr7_4:62084830-62084849 | None:intergenic | 40.0% | |
CTACAACAATTCGACCAAAG+AGG | - | chr7_4:62084857-62084876 | None:intergenic | 40.0% | |
GTCAATGTCCTTTGAATGGT+AGG | + | chr7_4:62084974-62084993 | Msa1169140:intron | 40.0% | |
CAATGCTACCTACCATTCAA+AGG | - | chr7_4:62084985-62085004 | None:intergenic | 40.0% | |
CTATCACGAACTACAAGGAA+AGG | - | chr7_4:62085154-62085173 | None:intergenic | 40.0% | |
CATAGTCTATTGGTCCTGTT+TGG | - | chr7_4:62085514-62085533 | None:intergenic | 40.0% | |
ACAGGACCAATAGACTATGT+TGG | + | chr7_4:62085515-62085534 | Msa1169140:intron | 40.0% | |
GGAGTTGCAAGTGCAATTAT+GGG | + | chr7_4:62085739-62085758 | Msa1169140:CDS | 40.0% | |
GAGTTGCAAGTGCAATTATG+GGG | + | chr7_4:62085740-62085759 | Msa1169140:CDS | 40.0% | |
CAATGCATCTCCAATGTTTG+AGG | + | chr7_4:62085777-62085796 | Msa1169140:CDS | 40.0% | |
GATCAACATCATGTGAACCA+TGG | + | chr7_4:62085835-62085854 | Msa1169140:CDS | 40.0% | |
ATTGAACGAACATCCATTGC+AGG | + | chr7_4:62085960-62085979 | Msa1169140:intron | 40.0% | |
!! | AGAACCATTTTCTGAAGAGC+TGG | - | chr7_4:62085991-62086010 | None:intergenic | 40.0% |
TCAAATGGATATGCATCCTC+AGG | + | chr7_4:62086083-62086102 | Msa1169140:CDS | 40.0% | |
GAGGTGGTACTTCAATATTG+GGG | - | chr7_4:62086109-62086128 | None:intergenic | 40.0% | |
GGAGGTGGTACTTCAATATT+GGG | - | chr7_4:62086110-62086129 | None:intergenic | 40.0% | |
AGGAGGTGGTACTTCAATAT+TGG | - | chr7_4:62086111-62086130 | None:intergenic | 40.0% | |
TCCTCATCAATTGGACACAT+CGG | + | chr7_4:62086127-62086146 | Msa1169140:CDS | 40.0% | |
TTTATGCATTCGTCTAGTGC+TGG | + | chr7_4:62086170-62086189 | Msa1169140:CDS | 40.0% | |
CATAATTGGAAGAAGAAGGC+TGG | - | chr7_4:62086229-62086248 | None:intergenic | 40.0% | |
ATTGATCTTACAATGGGGAG+TGG | + | chr7_4:62086281-62086300 | Msa1169140:CDS | 40.0% | |
CATAGACTGAAGGAATTCCA+GGG | - | chr7_4:62086331-62086350 | None:intergenic | 40.0% | |
TCATAGACTGAAGGAATTCC+AGG | - | chr7_4:62086332-62086351 | None:intergenic | 40.0% | |
ATTCCTTCAGTCTATGAGAG+AGG | + | chr7_4:62086335-62086354 | Msa1169140:CDS | 40.0% | |
TCAAGTGGGTATTTCAATGC+TGG | + | chr7_4:62086362-62086381 | Msa1169140:CDS | 40.0% | |
CAAGTGGGTATTTCAATGCT+GGG | + | chr7_4:62086363-62086382 | Msa1169140:CDS | 40.0% | |
ATGGCCAGAGAAACCAAATA+TGG | + | chr7_4:62086418-62086437 | Msa1169140:CDS | 40.0% | |
! | GGATCCATATTTGGTTTCTC+TGG | - | chr7_4:62086425-62086444 | None:intergenic | 40.0% |
TGGATCCTCAATATATGCCT+TGG | + | chr7_4:62086438-62086457 | Msa1169140:CDS | 40.0% | |
GGATCCTCAATATATGCCTT+GGG | + | chr7_4:62086439-62086458 | Msa1169140:CDS | 40.0% | |
TGATCCCAAGGCATATATTG+AGG | - | chr7_4:62086446-62086465 | None:intergenic | 40.0% | |
! | ATTTGGAATCCAACCTGTGT+AGG | + | chr7_4:62086555-62086574 | Msa1169140:CDS | 40.0% |
TTGATAAATGGGTCCTACAC+AGG | - | chr7_4:62086571-62086590 | None:intergenic | 40.0% | |
GGAAGCTTCCATCATGAATT+TGG | + | chr7_4:62086912-62086931 | Msa1169140:CDS | 40.0% | |
TGCTTGTGCCAAATTCATGA+TGG | - | chr7_4:62086923-62086942 | None:intergenic | 40.0% | |
AATTTGACTCAGACTGCTAG+GGG | + | chr7_4:62086972-62086991 | Msa1169140:CDS | 40.0% | |
AAGCGACACCTTCAGATAAT+GGG | + | chr7_4:62087063-62087082 | Msa1169140:CDS | 40.0% | |
GTTACTCTTCTAGACATCCA+AGG | + | chr7_4:62087105-62087124 | Msa1169140:CDS | 40.0% | |
! | ATATAGATCACTGGCTGATC+AGG | + | chr7_4:62087193-62087212 | Msa1169140:CDS | 40.0% |
CAGAGGATGATAATCTTGCA+TGG | - | chr7_4:62087226-62087245 | None:intergenic | 40.0% | |
TGCAAGATTATCATCCTCTG+AGG | + | chr7_4:62087226-62087245 | Msa1169140:CDS | 40.0% | |
!! | ATTATCATCCTCTGAGGTAC+CGG | + | chr7_4:62087232-62087251 | Msa1169140:intron | 40.0% |
GAGTTCTCTGATATACTGAC+CGG | - | chr7_4:62087254-62087273 | None:intergenic | 40.0% | |
!! | CTTTCTGGCCTTACTTCTAT+TGG | + | chr7_4:62087400-62087419 | Msa1169140:intron | 40.0% |
TTGATCAGCACAGAGAAATG+AGG | + | chr7_4:62087505-62087524 | Msa1169140:CDS | 40.0% | |
! | CTTTAGGAACTACTTGCACT+TGG | + | chr7_4:62087631-62087650 | Msa1169140:intron | 40.0% |
TTAGGAACTACTTGCACTTG+GGG | + | chr7_4:62087633-62087652 | Msa1169140:intron | 40.0% | |
GTCTTTGGATGACATTAACC+AGG | + | chr7_4:62087812-62087831 | Msa1169140:intron | 40.0% | |
! | ACAGGAAGAGTACAAGAACA+TGG | + | chr7_4:62087860-62087879 | Msa1169140:intron | 40.0% |
TACAAGAACATGGACGATGT+TGG | + | chr7_4:62087870-62087889 | Msa1169140:CDS | 40.0% | |
ACAAGAACATGGACGATGTT+GGG | + | chr7_4:62087871-62087890 | Msa1169140:CDS | 40.0% | |
GTTGGGACACTTAAAACTTG+TGG | + | chr7_4:62087888-62087907 | Msa1169140:CDS | 40.0% | |
!!! | TGAGGAAACAGACTAGCTTT+TGG | + | chr7_4:62088070-62088089 | Msa1169140:three_prime_UTR | 40.0% |
! | ACGCAAGAAGAAGGTGTGAA+GGG | - | chr7_4:62080809-62080828 | None:intergenic | 45.0% |
! | AACGCAAGAAGAAGGTGTGA+AGG | - | chr7_4:62080810-62080829 | None:intergenic | 45.0% |
CTTACGAATCGGTGAAGAAG+CGG | - | chr7_4:62080874-62080893 | None:intergenic | 45.0% | |
CAAGCAAACAAGCAATCGGA+GGG | - | chr7_4:62081102-62081121 | None:intergenic | 45.0% | |
TCAAGCAAACAAGCAATCGG+AGG | - | chr7_4:62081103-62081122 | None:intergenic | 45.0% | |
ACACACTTACACGTCGAAAC+CGG | + | chr7_4:62081203-62081222 | Msa1169140:intron | 45.0% | |
! | TGCTGTGAATCGCCCAATTT+TGG | + | chr7_4:62081472-62081491 | Msa1169140:intron | 45.0% |
TGCAGGTTTCTTGTTGCTGT+TGG | + | chr7_4:62081800-62081819 | Msa1169140:intron | 45.0% | |
ATTAACTCGCATCTCACCAG+TGG | - | chr7_4:62081851-62081870 | None:intergenic | 45.0% | |
CTGGTGAGATGCGAGTTAAT+TGG | + | chr7_4:62081851-62081870 | Msa1169140:intron | 45.0% | |
CAAAAAAAGGCAGGGAAGAG+AGG | - | chr7_4:62081894-62081913 | None:intergenic | 45.0% | |
TAATGCGTAAACCCAAAGGC+GGG | - | chr7_4:62081974-62081993 | None:intergenic | 45.0% | |
! | ATTTGCGTTGTGCGGGTTAT+GGG | + | chr7_4:62082040-62082059 | Msa1169140:intron | 45.0% |
CAAATGAAGAAGTGACCACC+CGG | - | chr7_4:62082067-62082086 | None:intergenic | 45.0% | |
AGGACACAAACCATACGAAC+GGG | - | chr7_4:62082324-62082343 | None:intergenic | 45.0% | |
!! | TTTGGGATCTGCTTTGGAGA+TGG | + | chr7_4:62082644-62082663 | Msa1169140:intron | 45.0% |
TTGGAGATGGTGCTTCTTAG+TGG | + | chr7_4:62082657-62082676 | Msa1169140:intron | 45.0% | |
TGGAGATGGTGCTTCTTAGT+GGG | + | chr7_4:62082658-62082677 | Msa1169140:intron | 45.0% | |
TCTACAGCAGTCACCATCAA+TGG | - | chr7_4:62082778-62082797 | None:intergenic | 45.0% | |
!!! | GGTTGGGATTTGTTTTGTGC+TGG | + | chr7_4:62082897-62082916 | Msa1169140:intron | 45.0% |
GTCTAACCAGATTGCAGATG+AGG | + | chr7_4:62083049-62083068 | Msa1169140:intron | 45.0% | |
ATCTGGGCATATCAAGGGTA+AGG | + | chr7_4:62083714-62083733 | Msa1169140:intron | 45.0% | |
AGCCTTCTCTCCTTTCTCAA+AGG | + | chr7_4:62083747-62083766 | Msa1169140:intron | 45.0% | |
TCTCCTTTCTCAAAGGAAGC+TGG | + | chr7_4:62083754-62083773 | Msa1169140:intron | 45.0% | |
CTCCTTTCTCAAAGGAAGCT+GGG | + | chr7_4:62083755-62083774 | Msa1169140:intron | 45.0% | |
! | AACCCAGCTTCCTTTGAGAA+AGG | - | chr7_4:62083760-62083779 | None:intergenic | 45.0% |
TGCTAACACCTTCTAACACC+TGG | + | chr7_4:62084446-62084465 | Msa1169140:intron | 45.0% | |
ATTACCTGGCTAGGTTTACC+AGG | - | chr7_4:62084467-62084486 | None:intergenic | 45.0% | |
GCATCAGATATTACCTGGCT+AGG | - | chr7_4:62084476-62084495 | None:intergenic | 45.0% | |
CTAAGGCAAGAAAACAGAGG+AGG | - | chr7_4:62084643-62084662 | None:intergenic | 45.0% | |
AGCTGCTCTTTCTGTATCAG+TGG | + | chr7_4:62084669-62084688 | Msa1169140:intron | 45.0% | |
CCAAAGAGGATAATCACCAC+AGG | - | chr7_4:62084843-62084862 | None:intergenic | 45.0% | |
CCTGTGGTGATTATCCTCTT+TGG | + | chr7_4:62084840-62084859 | Msa1169140:intron | 45.0% | |
TGTGTAAAGAATGCTGGACC+AGG | - | chr7_4:62085229-62085248 | None:intergenic | 45.0% | |
GATATTTGTGCAGGACGAGA+GGG | - | chr7_4:62085291-62085310 | None:intergenic | 45.0% | |
AGATATTTGTGCAGGACGAG+AGG | - | chr7_4:62085292-62085311 | None:intergenic | 45.0% | |
CGCAGTGCTTTACTAACTCA+TGG | + | chr7_4:62085325-62085344 | Msa1169140:intron | 45.0% | |
GGGAGTTGCAAGTGCAATTA+TGG | + | chr7_4:62085738-62085757 | Msa1169140:CDS | 45.0% | |
ATCTCCAATGTTTGAGGGTG+AGG | + | chr7_4:62085783-62085802 | Msa1169140:CDS | 45.0% | |
AACGAACATCCATTGCAGGT+GGG | + | chr7_4:62085964-62085983 | Msa1169140:intron | 45.0% | |
TGTTGGCGTTCCAATGAGAA+GGG | - | chr7_4:62086058-62086077 | None:intergenic | 45.0% | |
AACGCCAACACAAGGTCAAA+TGG | + | chr7_4:62086068-62086087 | Msa1169140:CDS | 45.0% | |
TACTTCAATATTGGGGCCTG+AGG | - | chr7_4:62086102-62086121 | None:intergenic | 45.0% | |
AGTACCACCTCCTCATCAAT+TGG | + | chr7_4:62086118-62086137 | Msa1169140:CDS | 45.0% | |
GATGTGTCCAATTGATGAGG+AGG | - | chr7_4:62086128-62086147 | None:intergenic | 45.0% | |
CCTCATCAATTGGACACATC+GGG | + | chr7_4:62086128-62086147 | Msa1169140:CDS | 45.0% | |
TATGAGAGAGGCAGTTCAAG+TGG | + | chr7_4:62086347-62086366 | Msa1169140:CDS | 45.0% | |
ATGAGAGAGGCAGTTCAAGT+GGG | + | chr7_4:62086348-62086367 | Msa1169140:CDS | 45.0% | |
TTCCGATACCTCCAGAATCA+TGG | + | chr7_4:62086399-62086418 | Msa1169140:CDS | 45.0% | |
TGAAGGGTGAGAGTTCTGTA+AGG | + | chr7_4:62086507-62086526 | Msa1169140:CDS | 45.0% | |
GAGCCGTTCTTCACTTGATT+TGG | + | chr7_4:62086538-62086557 | Msa1169140:CDS | 45.0% | |
TAAATGGGTCCTACACAGGT+TGG | - | chr7_4:62086567-62086586 | None:intergenic | 45.0% | |
TAGGATACGAGCTGTGTGAA+TGG | - | chr7_4:62086598-62086617 | None:intergenic | 45.0% | |
AAAGATCGGCCAAGCTAGAA+TGG | - | chr7_4:62086637-62086656 | None:intergenic | 45.0% | |
GGTGGAAACCTGAGAAAGAT+CGG | - | chr7_4:62086651-62086670 | None:intergenic | 45.0% | |
AGAGATCCACTCCAGCTTAT+AGG | + | chr7_4:62087015-62087034 | Msa1169140:CDS | 45.0% | |
GAGATCCACTCCAGCTTATA+GGG | + | chr7_4:62087016-62087035 | Msa1169140:CDS | 45.0% | |
CTTGAAGAAGCCCTATAAGC+TGG | - | chr7_4:62087029-62087048 | None:intergenic | 45.0% | |
CAAGCGACACCTTCAGATAA+TGG | + | chr7_4:62087062-62087081 | Msa1169140:CDS | 45.0% | |
ATGGGCAACCCATTATCTGA+AGG | - | chr7_4:62087074-62087093 | None:intergenic | 45.0% | |
!! | TTCAGATAATGGGTTGCCCA+TGG | + | chr7_4:62087073-62087092 | Msa1169140:CDS | 45.0% |
GAGTAACCTTCAGCTACCAT+GGG | - | chr7_4:62087092-62087111 | None:intergenic | 45.0% | |
AGAGTAACCTTCAGCTACCA+TGG | - | chr7_4:62087093-62087112 | None:intergenic | 45.0% | |
CCAACAGTGTTCAATAGCCT+TGG | - | chr7_4:62087125-62087144 | None:intergenic | 45.0% | |
CCAAGGCTATTGAACACTGT+TGG | + | chr7_4:62087122-62087141 | Msa1169140:CDS | 45.0% | |
! | TATTGAACACTGTTGGCTGG+CGG | + | chr7_4:62087129-62087148 | Msa1169140:CDS | 45.0% |
GGAACAGTGACAGAAATGGA+AGG | + | chr7_4:62087150-62087169 | Msa1169140:CDS | 45.0% | |
GTGCCTCACTATATGGTTCT+AGG | + | chr7_4:62087475-62087494 | Msa1169140:CDS | 45.0% | |
TCAGCACAGAGAAATGAGGA+TGG | + | chr7_4:62087509-62087528 | Msa1169140:CDS | 45.0% | |
CAGACAATCCTGTGTTCACT+TGG | - | chr7_4:62087669-62087688 | None:intergenic | 45.0% | |
AGTGAACACAGGATTGTCTG+AGG | + | chr7_4:62087669-62087688 | Msa1169140:CDS | 45.0% | |
TTGTTCGTCTGACCAATGTC+AGG | + | chr7_4:62087726-62087745 | Msa1169140:CDS | 45.0% | |
TCTGACCAATGTCAGGATGA+AGG | + | chr7_4:62087733-62087752 | Msa1169140:CDS | 45.0% | |
AGCTTCCTTCATCCTGACAT+TGG | - | chr7_4:62087741-62087760 | None:intergenic | 45.0% | |
CAAATCTTCTGCTTTGCCTG+AGG | + | chr7_4:62087974-62087993 | Msa1169140:CDS | 45.0% | |
!! | TAATAAATAAAAACAAAAAA+AGG | - | chr7_4:62081041-62081060 | None:intergenic | 5.0% |
!! | ATAAATTATATTACAAAAAA+AGG | - | chr7_4:62081907-62081926 | None:intergenic | 5.0% |
GAACACGCAACGCAAGAAGA+AGG | - | chr7_4:62080818-62080837 | None:intergenic | 50.0% | |
GAAGCGGTTGAGTAACGATC+TGG | - | chr7_4:62080840-62080859 | None:intergenic | 50.0% | |
TGAAGAAGCGGAAGAGGAAG+AGG | - | chr7_4:62080862-62080881 | None:intergenic | 50.0% | |
AATCGGTGAAGAAGCGGAAG+AGG | - | chr7_4:62080868-62080887 | None:intergenic | 50.0% | |
TCTGACACGCCTTTGATGAG+AGG | + | chr7_4:62081268-62081287 | Msa1169140:intron | 50.0% | |
! | ACGCCTTTGATGAGAGGTGT+CGG | + | chr7_4:62081274-62081293 | Msa1169140:intron | 50.0% |
ACACCGACACCTCTCATCAA+AGG | - | chr7_4:62081280-62081299 | None:intergenic | 50.0% | |
!! | GAGAGGTGTCGGTGTTACAA+AGG | + | chr7_4:62081285-62081304 | Msa1169140:intron | 50.0% |
! | CATTTGCGTTGTGCGGGTTA+TGG | + | chr7_4:62082039-62082058 | Msa1169140:intron | 50.0% |
CGGGTGGTCACTTCTTCATT+TGG | + | chr7_4:62082065-62082084 | Msa1169140:intron | 50.0% | |
GATATGCCGCAGTTAAGGAG+TGG | + | chr7_4:62082222-62082241 | Msa1169140:intron | 50.0% | |
GACTCACCACTCCTTAACTG+CGG | - | chr7_4:62082231-62082250 | None:intergenic | 50.0% | |
TTGTATAGGCCCCGTTCGTA+TGG | + | chr7_4:62082311-62082330 | Msa1169140:intron | 50.0% | |
GGACACAAACCATACGAACG+GGG | - | chr7_4:62082323-62082342 | None:intergenic | 50.0% | |
GCTGGAGATACTGTGGCTAT+AGG | + | chr7_4:62082421-62082440 | Msa1169140:intron | 50.0% | |
!! | AGGAATTTTAAGGAGGGCCG+TGG | + | chr7_4:62082495-62082514 | Msa1169140:intron | 50.0% |
CGGGGCAGATATTACTACTG+AGG | - | chr7_4:62082584-62082603 | None:intergenic | 50.0% | |
!! | TCTGCCCCGTGACTTGTTAA+TGG | + | chr7_4:62082595-62082614 | Msa1169140:intron | 50.0% |
GGAGATGGTGCTTCTTAGTG+GGG | + | chr7_4:62082659-62082678 | Msa1169140:intron | 50.0% | |
ATGGTGCTTCTTAGTGGGGT+TGG | + | chr7_4:62082663-62082682 | Msa1169140:intron | 50.0% | |
TGGTGCTTCTTAGTGGGGTT+GGG | + | chr7_4:62082664-62082683 | Msa1169140:intron | 50.0% | |
ACATGCAAGCTGTCATGAGC+TGG | + | chr7_4:62082959-62082978 | Msa1169140:intron | 50.0% | |
TGCATCCCTCATCTGCAATC+TGG | - | chr7_4:62083058-62083077 | None:intergenic | 50.0% | |
GTGACAGGAGAGAGAAGATG+AGG | - | chr7_4:62083955-62083974 | None:intergenic | 50.0% | |
GTTTCCCCACTCTTTGCTTC+TGG | + | chr7_4:62084374-62084393 | Msa1169140:intron | 50.0% | |
AGAGGCCAGAAGCAAAGAGT+GGG | - | chr7_4:62084382-62084401 | None:intergenic | 50.0% | |
AACACCTGGTAAACCTAGCC+AGG | + | chr7_4:62084460-62084479 | Msa1169140:intron | 50.0% | |
! | GGTAGGTAGCATTGAGCTGT+TGG | + | chr7_4:62084991-62085010 | Msa1169140:intron | 50.0% |
CAGGAGTTGCAACTCCCAAA+AGG | - | chr7_4:62085210-62085229 | None:intergenic | 50.0% | |
!! | CTTTTGGGAGTTGCAACTCC+TGG | + | chr7_4:62085208-62085227 | Msa1169140:intron | 50.0% |
! | CTGATAATGCAGGGCCAAAC+AGG | + | chr7_4:62085497-62085516 | Msa1169140:intron | 50.0% |
AGAGGCCAGAGCTTCACATT+GGG | - | chr7_4:62085604-62085623 | None:intergenic | 50.0% | |
AAGAGGCCAGAGCTTCACAT+TGG | - | chr7_4:62085605-62085624 | None:intergenic | 50.0% | |
TCAGCCTCACCCTCAAACAT+TGG | - | chr7_4:62085790-62085809 | None:intergenic | 50.0% | |
GAACGAACATCCATTGCAGG+TGG | + | chr7_4:62085963-62085982 | Msa1169140:intron | 50.0% | |
GGGACCAGCTCTTCAGAAAA+TGG | + | chr7_4:62085984-62086003 | Msa1169140:CDS | 50.0% | |
! | GTGTTGGCGTTCCAATGAGA+AGG | - | chr7_4:62086059-62086078 | None:intergenic | 50.0% |
CTCATTGGAACGCCAACACA+AGG | + | chr7_4:62086060-62086079 | Msa1169140:CDS | 50.0% | |
GTGTCCAATTGATGAGGAGG+TGG | - | chr7_4:62086125-62086144 | None:intergenic | 50.0% | |
CCCGATGTGTCCAATTGATG+AGG | - | chr7_4:62086131-62086150 | None:intergenic | 50.0% | |
CTGCCTCTCTCATAGACTGA+AGG | - | chr7_4:62086341-62086360 | None:intergenic | 50.0% | |
! | GGCCATGATTCTGGAGGTAT+CGG | - | chr7_4:62086404-62086423 | None:intergenic | 50.0% |
TTCTCTGGCCATGATTCTGG+AGG | - | chr7_4:62086410-62086429 | None:intergenic | 50.0% | |
GGTTTCTCTGGCCATGATTC+TGG | - | chr7_4:62086413-62086432 | None:intergenic | 50.0% | |
CTCACCCTTCATTGAGAGAC+CGG | - | chr7_4:62086498-62086517 | None:intergenic | 50.0% | |
AGCTAGAATGGCTGACTGGT+GGG | - | chr7_4:62086625-62086644 | None:intergenic | 50.0% | |
AAGCTAGAATGGCTGACTGG+TGG | - | chr7_4:62086626-62086645 | None:intergenic | 50.0% | |
! | ACCAGTCAGCCATTCTAGCT+TGG | + | chr7_4:62086625-62086644 | Msa1169140:CDS | 50.0% |
TAGCTTGGCCGATCTTTCTC+AGG | + | chr7_4:62086640-62086659 | Msa1169140:CDS | 50.0% | |
AGGTTTCCACCTCTCTGACA+AGG | + | chr7_4:62086660-62086679 | Msa1169140:CDS | 50.0% | |
GGTTTCCACCTCTCTGACAA+GGG | + | chr7_4:62086661-62086680 | Msa1169140:CDS | 50.0% | |
GAGACAAGTCACTTCCCTGT+TGG | + | chr7_4:62086843-62086862 | Msa1169140:CDS | 50.0% | |
CAGCAGCAGCATTTCCAACA+GGG | - | chr7_4:62086860-62086879 | None:intergenic | 50.0% | |
AGAAGCCCTATAAGCTGGAG+TGG | - | chr7_4:62087024-62087043 | None:intergenic | 50.0% | |
GCTTCTTCAAGCTTGCGCTT+GGG | + | chr7_4:62087038-62087057 | Msa1169140:CDS | 50.0% | |
GGCTATTGAACACTGTTGGC+TGG | + | chr7_4:62087126-62087145 | Msa1169140:CDS | 50.0% | |
TGGCGGAACAGTGACAGAAA+TGG | + | chr7_4:62087146-62087165 | Msa1169140:CDS | 50.0% | |
TATACTGACCGGTACCTCAG+AGG | - | chr7_4:62087243-62087262 | None:intergenic | 50.0% | |
GTTGAGCGTGCCTCACTATA+TGG | + | chr7_4:62087468-62087487 | Msa1169140:CDS | 50.0% | |
AACTACTTGCACTTGGGGAG+AGG | + | chr7_4:62087638-62087657 | Msa1169140:CDS | 50.0% | |
!! | AGGATTGGCCAAGTGAACAC+AGG | + | chr7_4:62087658-62087677 | Msa1169140:CDS | 50.0% |
AGGAAGCTGTGTGATCTGTC+TGG | + | chr7_4:62087753-62087772 | Msa1169140:CDS | 50.0% | |
CTTCTGCTTTGCCTGAGGAT+AGG | + | chr7_4:62087979-62087998 | Msa1169140:CDS | 50.0% | |
TGCTTTGCCTGAGGATAGGA+AGG | + | chr7_4:62087983-62088002 | Msa1169140:CDS | 50.0% | |
AGCGGAAGAGGAAGAGGAAG+CGG | - | chr7_4:62080856-62080875 | None:intergenic | 55.0% | |
GGCAGGGAAGAGAGGAAATG+AGG | - | chr7_4:62081886-62081905 | None:intergenic | 55.0% | |
GCCTTCGCATTTGCGTTGTG+CGG | + | chr7_4:62082032-62082051 | Msa1169140:intron | 55.0% | |
CCTTCGCATTTGCGTTGTGC+GGG | + | chr7_4:62082033-62082052 | Msa1169140:intron | 55.0% | |
CTCTCCTTATTGTGGGGGAC+TGG | + | chr7_4:62083125-62083144 | Msa1169140:intron | 55.0% | |
CCATCCAGTCCCCCACAATA+AGG | - | chr7_4:62083132-62083151 | None:intergenic | 55.0% | |
CCTTATTGTGGGGGACTGGA+TGG | + | chr7_4:62083129-62083148 | Msa1169140:intron | 55.0% | |
!! | GGGGACTGGATGGTCTTATG+AGG | + | chr7_4:62083139-62083158 | Msa1169140:intron | 55.0% |
GAGGCCAGAAGCAAAGAGTG+GGG | - | chr7_4:62084381-62084400 | None:intergenic | 55.0% | |
CAGAGGCCAGAAGCAAAGAG+TGG | - | chr7_4:62084383-62084402 | None:intergenic | 55.0% | |
CATCACAAGAGGAAGAGCCC+TGG | + | chr7_4:62086311-62086330 | Msa1169140:CDS | 55.0% | |
GCCTTGGGATCATGCTGCTA+TGG | + | chr7_4:62086454-62086473 | Msa1169140:CDS | 55.0% | |
GCCATAGCAGCATGATCCCA+AGG | - | chr7_4:62086458-62086477 | None:intergenic | 55.0% | |
GCTATGGCTCCCACATTCAG+AGG | + | chr7_4:62086470-62086489 | Msa1169140:CDS | 55.0% | |
AGACCGGCACCTCTGAATGT+GGG | - | chr7_4:62086482-62086501 | None:intergenic | 55.0% | |
!! | AGGTGCCGGTCTCTCAATGA+AGG | + | chr7_4:62086490-62086509 | Msa1169140:CDS | 55.0% |
!! | GGTGCCGGTCTCTCAATGAA+GGG | + | chr7_4:62086491-62086510 | Msa1169140:CDS | 55.0% |
GCCAAGCTAGAATGGCTGAC+TGG | - | chr7_4:62086629-62086648 | None:intergenic | 55.0% | |
CCAATCCCTTGTCAGAGAGG+TGG | - | chr7_4:62086669-62086688 | None:intergenic | 55.0% | |
CCACCTCTCTGACAAGGGAT+TGG | + | chr7_4:62086666-62086685 | Msa1169140:CDS | 55.0% | |
GCTCCAATCCCTTGTCAGAG+AGG | - | chr7_4:62086672-62086691 | None:intergenic | 55.0% | |
GCAGCAGCAGCATTTCCAAC+AGG | - | chr7_4:62086861-62086880 | None:intergenic | 55.0% | |
GGCTTCTTCAAGCTTGCGCT+TGG | + | chr7_4:62087037-62087056 | Msa1169140:CDS | 55.0% | |
CTTGCACTTGGGGAGAGGAT+TGG | + | chr7_4:62087643-62087662 | Msa1169140:CDS | 55.0% | |
CCCGCACAACGCAAATGCGA+AGG | - | chr7_4:62082036-62082055 | None:intergenic | 60.0% | |
! | CGTTGTGCGGGTTATGGGAC+CGG | + | chr7_4:62082045-62082064 | Msa1169140:intron | 60.0% |
! | GTTGTGCGGGTTATGGGACC+GGG | + | chr7_4:62082046-62082065 | Msa1169140:intron | 60.0% |
GTGCAGGACGAGAGGGAAGT+CGG | - | chr7_4:62085284-62085303 | None:intergenic | 60.0% | |
AGGGTGAGGCTGACCCGAAT+TGG | + | chr7_4:62085797-62085816 | Msa1169140:CDS | 60.0% | |
AGAGCTGGTCCCACCTGCAA+TGG | - | chr7_4:62085976-62085995 | None:intergenic | 60.0% | |
GTGGACGAGCGCATCACAAG+AGG | + | chr7_4:62086300-62086319 | Msa1169140:CDS | 60.0% | |
! | GCTCCCACATTCAGAGGTGC+CGG | + | chr7_4:62086476-62086495 | Msa1169140:CDS | 60.0% |
GAGACCGGCACCTCTGAATG+TGG | - | chr7_4:62086483-62086502 | None:intergenic | 60.0% | |
TGGCTGACTGGTGGGACAGT+AGG | - | chr7_4:62086617-62086636 | None:intergenic | 60.0% | |
GGGTTGCCCATGGTAGCTGA+AGG | + | chr7_4:62087083-62087102 | Msa1169140:CDS | 60.0% | |
! | GTGCGGGTTATGGGACCGGG+TGG | + | chr7_4:62082049-62082068 | Msa1169140:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 62080598 | 62088216 | 62080598 | ID=Msa1169140;Name=Msa1169140 |
chr7_4 | mRNA | 62080598 | 62088216 | 62080598 | ID=Msa1169140-mRNA-1;Parent=Msa1169140;Name=Msa1169140-mRNA-1;_AED=0.31;_eAED=0.31;_QI=136|0.85|0.87|1|0.71|0.87|8|203|644 |
chr7_4 | exon | 62080598 | 62080888 | 62080598 | ID=Msa1169140-mRNA-1:exon:19584;Parent=Msa1169140-mRNA-1 |
chr7_4 | exon | 62081805 | 62081853 | 62081805 | ID=Msa1169140-mRNA-1:exon:19585;Parent=Msa1169140-mRNA-1 |
chr7_4 | exon | 62085691 | 62085856 | 62085691 | ID=Msa1169140-mRNA-1:exon:19586;Parent=Msa1169140-mRNA-1 |
chr7_4 | exon | 62085982 | 62086734 | 62085982 | ID=Msa1169140-mRNA-1:exon:19587;Parent=Msa1169140-mRNA-1 |
chr7_4 | exon | 62086823 | 62087247 | 62086823 | ID=Msa1169140-mRNA-1:exon:19588;Parent=Msa1169140-mRNA-1 |
chr7_4 | exon | 62087456 | 62087554 | 62087456 | ID=Msa1169140-mRNA-1:exon:19589;Parent=Msa1169140-mRNA-1 |
chr7_4 | exon | 62087637 | 62087774 | 62087637 | ID=Msa1169140-mRNA-1:exon:19590;Parent=Msa1169140-mRNA-1 |
chr7_4 | exon | 62087864 | 62088216 | 62087864 | ID=Msa1169140-mRNA-1:exon:19591;Parent=Msa1169140-mRNA-1 |
chr7_4 | five_prime_UTR | 62080598 | 62080733 | 62080598 | ID=Msa1169140-mRNA-1:five_prime_utr;Parent=Msa1169140-mRNA-1 |
chr7_4 | CDS | 62080734 | 62080888 | 62080734 | ID=Msa1169140-mRNA-1:cds;Parent=Msa1169140-mRNA-1 |
chr7_4 | CDS | 62081805 | 62081853 | 62081805 | ID=Msa1169140-mRNA-1:cds;Parent=Msa1169140-mRNA-1 |
chr7_4 | CDS | 62085691 | 62085856 | 62085691 | ID=Msa1169140-mRNA-1:cds;Parent=Msa1169140-mRNA-1 |
chr7_4 | CDS | 62085982 | 62086734 | 62085982 | ID=Msa1169140-mRNA-1:cds;Parent=Msa1169140-mRNA-1 |
chr7_4 | CDS | 62086823 | 62087247 | 62086823 | ID=Msa1169140-mRNA-1:cds;Parent=Msa1169140-mRNA-1 |
chr7_4 | CDS | 62087456 | 62087554 | 62087456 | ID=Msa1169140-mRNA-1:cds;Parent=Msa1169140-mRNA-1 |
chr7_4 | CDS | 62087637 | 62087774 | 62087637 | ID=Msa1169140-mRNA-1:cds;Parent=Msa1169140-mRNA-1 |
chr7_4 | CDS | 62087864 | 62088013 | 62087864 | ID=Msa1169140-mRNA-1:cds;Parent=Msa1169140-mRNA-1 |
chr7_4 | three_prime_UTR | 62088014 | 62088216 | 62088014 | ID=Msa1169140-mRNA-1:three_prime_utr;Parent=Msa1169140-mRNA-1 |
Gene Sequence |
Protein sequence |