AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1170180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1170180 MtrunA17_Chr7g0266451 93.252 489 11 4 1 479 1 477 0.0 767
Msa1170180 MtrunA17_Chr4g0026301 65.847 366 107 3 80 440 92 444 4.73e-177 506
Msa1170180 MtrunA17_Chr7g0217261 59.840 376 131 4 76 446 329 689 1.72e-155 458
Msa1170180 MtrunA17_Chr7g0276201 51.190 420 175 8 43 446 44 449 1.42e-133 394
Msa1170180 MtrunA17_Chr8g0372111 32.377 244 156 4 99 333 419 662 1.40e-33 135
Msa1170180 MtrunA17_Chr8g0335981 29.139 302 181 8 59 348 196 476 1.38e-28 119
Msa1170180 MtrunA17_Chr7g0250221 28.777 278 174 8 62 324 162 430 2.20e-21 97.8
Msa1170180 MtrunA17_Chr4g0074711 21.311 366 215 12 92 417 63 395 4.91e-13 70.9
Msa1170180 MtrunA17_Chr3g0134141 23.932 234 155 8 98 315 24 250 8.10e-13 70.9
Msa1170180 MtrunA17_Chr1g0153181 24.111 253 169 8 98 334 32 277 2.74e-12 68.9
Msa1170180 MtrunA17_Chr4g0044541 26.364 220 130 5 132 325 160 373 6.69e-12 67.8
Msa1170180 MtrunA17_Chr0c09g0493511 25.000 220 128 8 133 325 70 279 4.26e-11 65.1
Msa1170180 MtrunA17_Chr6g0466501 25.468 267 169 9 98 348 25 277 5.75e-11 64.7
Msa1170180 MtrunA17_Chr1g0201151 25.256 293 191 10 73 348 5 286 9.40e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1170180 AT3G52660.3 53.992 476 189 7 21 479 9 471 5.70e-151 439
Msa1170180 AT3G52660.1 53.992 476 189 7 21 479 9 471 5.70e-151 439
Msa1170180 AT3G52660.2 53.992 476 189 7 21 479 9 471 5.70e-151 439
Msa1170180 AT4G00830.2 49.660 441 192 9 55 479 69 495 2.87e-148 433
Msa1170180 AT4G00830.1 49.660 441 192 9 55 479 69 495 2.87e-148 433
Msa1170180 AT4G00830.6 49.660 441 192 9 55 479 69 495 2.87e-148 433
Msa1170180 AT4G00830.3 48.753 441 188 10 55 479 69 487 4.91e-142 417
Msa1170180 AT4G00830.5 48.753 441 188 10 55 479 69 487 4.91e-142 417
Msa1170180 AT4G00830.4 48.299 441 198 9 55 479 69 495 1.62e-141 416
Msa1170180 AT5G28390.1 43.496 246 71 5 236 479 1 180 2.59e-49 167
Msa1170180 AT2G44710.4 27.353 340 213 9 52 376 101 421 1.34e-24 107
Msa1170180 AT2G44710.2 27.042 355 227 9 52 393 186 521 1.88e-24 107
Msa1170180 AT2G44710.1 27.042 355 227 9 52 393 186 521 1.88e-24 107
Msa1170180 AT1G71770.1 26.122 245 157 7 98 325 59 296 9.42e-14 74.3
Msa1170180 AT1G71770.2 26.122 245 157 7 98 325 59 296 9.42e-14 74.3
Msa1170180 AT2G23350.1 25.068 367 208 16 123 455 164 497 1.91e-13 73.2
Msa1170180 AT2G23350.1 25.000 252 162 9 100 332 48 291 8.59e-13 71.2
Msa1170180 AT1G49760.1 25.410 244 159 9 98 325 45 281 2.58e-13 72.8
Msa1170180 AT1G49760.1 24.000 350 178 16 132 444 171 469 4.65e-11 65.9
Msa1170180 AT1G49760.2 25.410 244 159 9 98 325 45 281 2.58e-13 72.8
Msa1170180 AT1G49760.2 24.000 350 178 16 132 444 171 469 4.65e-11 65.9
Msa1170180 AT3G16380.1 25.397 252 147 10 100 325 23 259 1.34e-12 70.5

Find 184 sgRNAs with CRISPR-Local

Find 468 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCTTCTTTGTATGCTTC+TGG 0.169584 7_4:-63327809 Msa1170180:five_prime_UTR
CCCTGGTGACTCTGAATTTC+GGG 0.172010 7_4:+63327701 None:intergenic
CCGAGTTTCCCAGAAAATTT+TGG 0.176146 7_4:+63328050 None:intergenic
CCCCTGGTGACTCTGAATTT+CGG 0.182553 7_4:+63327700 None:intergenic
ATTCTACTTGGTGCCAATTT+TGG 0.211528 7_4:-63323026 Msa1170180:three_prime_UTR
GACAAAGGAATTAGCATCTA+AGG 0.262798 7_4:-63327228 Msa1170180:CDS
AGCCTCATCTTCTTCATCTA+AGG 0.282163 7_4:+63327509 None:intergenic
TGCTAATTCCTTTGTCTTGA+AGG 0.283256 7_4:+63327235 None:intergenic
AATAAATTGCTTCCCATCAT+AGG 0.285536 7_4:+63323205 None:intergenic
TCTTCTACAGTCCACTCTTT+AGG 0.290635 7_4:+63326920 None:intergenic
TGGCGCGTGCTTTGTTCTTA+AGG 0.291925 7_4:+63329241 None:intergenic
CTCAACTAGTTCAAACAAAT+AGG 0.293611 7_4:-63323122 Msa1170180:three_prime_UTR
TTAAACTAGCCTGCCAAAAT+TGG 0.297730 7_4:+63323013 None:intergenic
CGCCAACGATTACGAGTTTA+GGG 0.305185 7_4:-63329223 Msa1170180:five_prime_UTR
GCGCCAACGATTACGAGTTT+AGG 0.311976 7_4:-63329224 Msa1170180:five_prime_UTR
GGTATGGTTGGAGGTGGATA+TGG 0.314554 7_4:-63324326 Msa1170180:CDS
TAGTTATACCACAATTTAAC+TGG 0.334444 7_4:-63328073 Msa1170180:five_prime_UTR
ATCTAGAAAAGCAAGCTTGC+AGG 0.339804 7_4:+63327762 None:intergenic
CTCCTACCATGCCGGGATAC+TGG 0.355913 7_4:+63323468 None:intergenic
GGTGCTGTTGGTGCAGGATA+TGG 0.366546 7_4:-63324305 Msa1170180:CDS
ATCGGCCATGACCACGATTA+CGG 0.369175 7_4:+63323400 None:intergenic
CACAGAGTTCTAGCCGTAAT+CGG 0.371058 7_4:-63326654 Msa1170180:CDS
TATGAGAAAATTTGCAGAAC+AGG 0.371907 7_4:-63323308 Msa1170180:three_prime_UTR
TTCTAGATTCATAGAATGCC+TGG 0.372466 7_4:-63327747 Msa1170180:exon
CTTCGATTTCACTTCCAATC+AGG 0.389036 7_4:-63329155 Msa1170180:intron
TCAACTAGTTCAAACAAATA+GGG 0.391746 7_4:-63323121 Msa1170180:three_prime_UTR
GTTAAGCATCGGTTATTCAT+TGG 0.392291 7_4:-63326950 Msa1170180:CDS
GGTTGGCCCTGGAGTCATTT+CGG 0.392811 7_4:-63326876 Msa1170180:CDS
TACGTTGGGCCTTATGGGTC+GGG 0.396545 7_4:+63329309 None:intergenic
TTTGTTGCTATGCTACTCCT+TGG 0.399721 7_4:-63327917 Msa1170180:five_prime_UTR
TACATTAGTAAGGATTATAT+CGG 0.403248 7_4:+63323382 None:intergenic
TATCCACCTCCTCTTGGTTA+TGG 0.404216 7_4:-63324347 Msa1170180:CDS
CATTTCGGTGGAACTGTTGA+AGG 0.404786 7_4:-63326861 Msa1170180:intron
CTTCTTGCGCTTCCACCTCA+TGG 0.410083 7_4:-63327465 Msa1170180:CDS
GTCCATTCCAGAAAACTTGA+TGG 0.415687 7_4:+63324465 None:intergenic
GGTGGAGGAAGAAGTGGAAG+AGG 0.422190 7_4:-63327568 Msa1170180:CDS
TAGGAACAATTACATTAGTA+AGG 0.425175 7_4:+63323372 None:intergenic
TTACGTTGGGCCTTATGGGT+CGG 0.429968 7_4:+63329308 None:intergenic
GTTGAACAACTCTGAATTCA+AGG 0.433692 7_4:-63327195 Msa1170180:intron
CTTGGTTATGGTATGGTTGG+AGG 0.434215 7_4:-63324335 Msa1170180:CDS
GTATGAAGAAGTAGAGGTGG+AGG 0.436885 7_4:-63327583 Msa1170180:CDS
TGCATAGGTAAGGGTTATGA+AGG 0.438139 7_4:-63327287 Msa1170180:intron
GGACAAGAAAAGAGCAGATA+TGG 0.438969 7_4:-63324626 Msa1170180:CDS
TCTTACTCTGCTATTCCATC+TGG 0.438998 7_4:-63327862 Msa1170180:five_prime_UTR
GGTGAGCAGGTAGATCTTGA+TGG 0.439005 7_4:-63327645 Msa1170180:CDS
ACAGAGTTCTAGCCGTAATC+GGG 0.441429 7_4:-63326653 Msa1170180:CDS
CCTGCGTATCCACCTCCTCT+TGG 0.442592 7_4:-63324353 Msa1170180:CDS
ACCTCCTCTTGGTTATGGTA+TGG 0.445868 7_4:-63324342 Msa1170180:CDS
TAAAAGCAAATCCCCGATTA+CGG 0.448099 7_4:+63326641 None:intergenic
CTCGGCGGTGTATGTCCAGA+TGG 0.451609 7_4:+63329282 None:intergenic
AGAGGATAACAATGCTCAAA+AGG 0.456882 7_4:+63327982 None:intergenic
ACTAATGTAATTGTTCCTAC+TGG 0.458808 7_4:-63323368 Msa1170180:exon
CCTCTTGGTTATGGTATGGT+TGG 0.461631 7_4:-63324338 Msa1170180:CDS
GTTGTTGCCAAGGTTGGCCC+TGG 0.464947 7_4:-63326887 Msa1170180:CDS
AAAGAGCTGTTTGAACATCA+TGG 0.465220 7_4:-63324686 Msa1170180:CDS
GGAGGTGGATATGGTGCTGT+TGG 0.465667 7_4:-63324317 Msa1170180:CDS
ATGGTTCAGAGGTCTACATT+GGG 0.465780 7_4:-63327446 Msa1170180:CDS
GGTGCAGGATATGGTGCTGC+TGG 0.466144 7_4:-63324296 Msa1170180:CDS
AGTAGAGGTGGAGGAAGAAG+TGG 0.470019 7_4:-63327574 Msa1170180:CDS
AGTGGAAGAGGAAGAAGAAG+AGG 0.471511 7_4:-63327556 Msa1170180:CDS
CAAGCAGATCAGAAGTCATC+TGG 0.473781 7_4:-63324407 Msa1170180:CDS
ACGGAGAAGTATGAAATTGA+TGG 0.475658 7_4:-63324554 Msa1170180:intron
ATGCTTGTGCAGAATATTCA+AGG 0.479524 7_4:-63326603 Msa1170180:CDS
GGTCACAAAAGCATAACCTT+TGG 0.479540 7_4:+63327256 None:intergenic
GAATGGACCAGGTCAAACTT+TGG 0.480376 7_4:-63324450 Msa1170180:CDS
TCCCATCATAGGAAAAGATA+AGG 0.481594 7_4:+63323216 None:intergenic
CATCTGTAGGCTTAGAGCAC+TGG 0.483180 7_4:-63323160 Msa1170180:three_prime_UTR
TGGACGAATTCACTATTTCT+CGG 0.483888 7_4:+63329264 None:intergenic
GGCCCAACGTAAAACCCATC+TGG 0.485879 7_4:-63329297 Msa1170180:five_prime_UTR
GCCTCATCTTCTTCATCTAA+GGG 0.486530 7_4:+63327510 None:intergenic
TGAATCATCATCATCCTCTC+AGG 0.490075 7_4:-63326506 Msa1170180:intron
ACCCACAGATTCTGGTGAGC+AGG 0.493614 7_4:-63327658 Msa1170180:CDS
GGTTATGGTATGGTTGGAGG+TGG 0.495269 7_4:-63324332 Msa1170180:CDS
AAGAAGGTTGTTGCCAAGGT+TGG 0.496072 7_4:-63326893 Msa1170180:CDS
GCAACAAAAGTAAGAAAGAC+AGG 0.496344 7_4:+63327932 None:intergenic
AAAGGCCCGCCCGACCCATA+AGG 0.498215 7_4:-63329318 Msa1170180:five_prime_UTR
GGCATCATTGTCATGCCAGC+AGG 0.499937 7_4:+63323699 None:intergenic
ACATATGCAATCCTTCCATC+TGG 0.499994 7_4:+63323666 None:intergenic
AAGAAGAGAGTTTGCAAATG+TGG 0.500154 7_4:+63327822 None:intergenic
GCTCTCCCTCCTGCTAAAGC+TGG 0.501443 7_4:-63324647 Msa1170180:CDS
CACCACTACTCCTACCATGC+CGG 0.502610 7_4:+63323460 None:intergenic
TGAGTATGAAGAAGTAGAGG+TGG 0.503776 7_4:-63327586 Msa1170180:CDS
GGTCCGGGAGCAACTCCTGC+TGG 0.509565 7_4:-63323714 Msa1170180:CDS
AGAAGAAGAGGAAGAAGTAG+AGG 0.510075 7_4:-63327544 Msa1170180:CDS
GAGTTGATGTTGATGTATAA+AGG 0.510191 7_4:-63329336 Msa1170180:five_prime_UTR
TCGGCGGTGTATGTCCAGAT+GGG 0.512621 7_4:+63329283 None:intergenic
ACCACTACTCCTACCATGCC+GGG 0.514963 7_4:+63323461 None:intergenic
TTTAAGTCTAAGATTCTACT+TGG 0.516185 7_4:-63323038 Msa1170180:three_prime_UTR
CGCGTGCTTTGTTCTTAAGG+TGG 0.517038 7_4:+63329244 None:intergenic
TTGGGCCTTATGGGTCGGGC+GGG 0.521978 7_4:+63329313 None:intergenic
GTGAGCAGGTAGATCTTGAT+GGG 0.522099 7_4:-63327644 Msa1170180:CDS
AGTTCCACCGAAATGACTCC+AGG 0.523128 7_4:+63326869 None:intergenic
TGATAGGTCAAGTGCAATGA+AGG 0.523880 7_4:-63324588 Msa1170180:CDS
CCCATCATAGGAAAAGATAA+GGG 0.524572 7_4:+63323217 None:intergenic
GGATATGGTGCTGTTGGTGC+AGG 0.526774 7_4:-63324311 Msa1170180:CDS
GGAAAACGGAAGTACCTGAT+TGG 0.528615 7_4:+63329141 None:intergenic
TGTGACTGTAGGCAACAGCC+AGG 0.530335 7_4:-63323513 Msa1170180:intron
CTTCCATCTGGTAAAAGCAT+TGG 0.530824 7_4:+63323678 None:intergenic
AGCTTGCAGGGCAACTATGA+AGG 0.533010 7_4:+63327775 None:intergenic
GATGATGATTCAGAATTCCT+CGG 0.535591 7_4:+63326517 None:intergenic
ATAACGATGCAATAGTGAGC+TGG 0.537030 7_4:-63326546 Msa1170180:CDS
TCTTGTCCAGCTTTAGCAGG+AGG 0.538943 7_4:+63324641 None:intergenic
AATGACTCCAGGGCCAACCT+TGG 0.541179 7_4:+63326880 None:intergenic
ATGATGATTCAGAATTCCTC+GGG 0.542091 7_4:+63326518 None:intergenic
TACCTGCTCACCAGAATCTG+TGG 0.544070 7_4:+63327656 None:intergenic
ATGCCAGCAGGAGTTGCTCC+CGG 0.544143 7_4:+63323711 None:intergenic
CATGGTTCAGAGGTCTACAT+TGG 0.544508 7_4:-63327447 Msa1170180:CDS
TATGAAGAAGGTTGTTGCCA+AGG 0.545814 7_4:-63326897 Msa1170180:CDS
CTTGTCCAGCTTTAGCAGGA+GGG 0.546775 7_4:+63324642 None:intergenic
TCTAGATTCATAGAATGCCT+GGG 0.547799 7_4:-63327746 Msa1170180:exon
GATGACTTCTGATCTGCTTG+TGG 0.549430 7_4:+63324410 None:intergenic
AGTTGAGTATGAAGAAGTAG+AGG 0.551022 7_4:-63327589 Msa1170180:CDS
AAAATTTGCAGAACAGGCAT+AGG 0.551199 7_4:-63323302 Msa1170180:three_prime_UTR
TTGTCAATCTGTGGGAGAAG+TGG 0.551925 7_4:-63327382 Msa1170180:CDS
ATGCTCCATCACCAGTATCC+CGG 0.551954 7_4:-63323479 Msa1170180:CDS
GACTGTAGAAGATATGAAGA+AGG 0.552294 7_4:-63326909 Msa1170180:CDS
AATGTGCAGCCACTGATGTA+TGG 0.552663 7_4:-63323735 Msa1170180:intron
AATGAAGGCATTGAAGAATA+CGG 0.554131 7_4:-63324573 Msa1170180:CDS
TTGGTAATGTTCCTAAAGAG+TGG 0.554375 7_4:-63326931 Msa1170180:CDS
AACCGATGCTTAACTTGAGA+TGG 0.558623 7_4:+63326959 None:intergenic
CCATGCCGGGATACTGGTGA+TGG 0.560019 7_4:+63323474 None:intergenic
CAGTGCTCTAAGCCTACAGA+TGG 0.560481 7_4:+63323161 None:intergenic
AGTAGTGGTGTCAGCTCAAG+TGG 0.560864 7_4:-63323447 Msa1170180:CDS
AATAACCGTAATCGTGGTCA+TGG 0.562058 7_4:-63323405 Msa1170180:CDS
TGGTGCTGCTGGCTTTGCAC+CGG 0.565428 7_4:-63324285 Msa1170180:intron
TCTAGAAAAGCAAGCTTGCA+GGG 0.565994 7_4:+63327763 None:intergenic
ACTCCTTGGTCCATACCTCA+TGG 0.567908 7_4:-63327903 Msa1170180:five_prime_UTR
TAACGATGCAATAGTGAGCT+GGG 0.568267 7_4:-63326545 Msa1170180:CDS
TGAAACTGTTCCATGAGGTA+TGG 0.570420 7_4:+63327893 None:intergenic
CACCATCTCAAGTTAAGCAT+CGG 0.570455 7_4:-63326961 Msa1170180:CDS
GCAGCCACTGATGTATGGTC+CGG 0.571930 7_4:-63323730 Msa1170180:intron
ATGTGGAAAGGTGGAAACAA+TGG 0.573479 7_4:+63327839 None:intergenic
TCATGGAAAGATCACAAAAG+TGG 0.575285 7_4:-63324669 Msa1170180:CDS
GCCCGAAATTCAGAGTCACC+AGG 0.578656 7_4:-63327702 Msa1170180:CDS
AGTTTGCAAATGTGGAAAGG+TGG 0.581122 7_4:+63327830 None:intergenic
AACCCTAAACTCGTAATCGT+TGG 0.581482 7_4:+63329221 None:intergenic
GCATAGGTAAGGGTTATGAA+GGG 0.583284 7_4:-63327286 Msa1170180:intron
ATACCATAACCAAGAGGAGG+TGG 0.583928 7_4:+63324344 None:intergenic
ATCTGTGGGAGAAGTGGCAG+AGG 0.585652 7_4:-63327376 Msa1170180:intron
CCAAGAGGAGGTGGATACGC+AGG 0.593051 7_4:+63324353 None:intergenic
TCCCGGCATGGTAGGAGTAG+TGG 0.593910 7_4:-63323462 Msa1170180:CDS
CAGCCACTGATGTATGGTCC+GGG 0.596285 7_4:-63323729 Msa1170180:CDS
GCCCTTAGATGAAGAAGATG+AGG 0.598683 7_4:-63327511 Msa1170180:CDS
GAGAGTTTGCAAATGTGGAA+AGG 0.598965 7_4:+63327827 None:intergenic
CAACTAGTTCAAACAAATAG+GGG 0.600096 7_4:-63323120 Msa1170180:three_prime_UTR
GTTGGGCCTTATGGGTCGGG+CGG 0.600341 7_4:+63329312 None:intergenic
TGATGGGGACAATGATCAAG+AGG 0.603621 7_4:-63327628 Msa1170180:CDS
AGGTGGAAACAATGGCCAGA+TGG 0.603883 7_4:+63327847 None:intergenic
AGAGCACTGGCGATGACTCA+CGG 0.605652 7_4:-63323147 Msa1170180:three_prime_UTR
GCTTCCACCTCATGGTTCAG+AGG 0.610025 7_4:-63327457 Msa1170180:CDS
CACCAGTATCCCGGCATGGT+AGG 0.611902 7_4:-63323470 Msa1170180:CDS
GGAGCATGTTGTTGAAAACC+TGG 0.612025 7_4:+63323495 None:intergenic
ACCTGCTCACCAGAATCTGT+GGG 0.613571 7_4:+63327657 None:intergenic
ATAATCTTACTCCCATCTGT+AGG 0.614931 7_4:-63323173 Msa1170180:three_prime_UTR
CCGAAATTCAGAGTCACCAG+GGG 0.615182 7_4:-63327700 Msa1170180:CDS
TAGTGAGCTGGGCTGACCCG+AGG 0.618827 7_4:-63326534 Msa1170180:CDS
GAGCATTCCAAAGTTTGACC+TGG 0.618990 7_4:+63324443 None:intergenic
CCCGAAATTCAGAGTCACCA+GGG 0.620516 7_4:-63327701 Msa1170180:CDS
AACGATAATAACCGTAATCG+TGG 0.621986 7_4:-63323411 Msa1170180:CDS
TGGCCCTGGAGTCATTTCGG+TGG 0.622046 7_4:-63326873 Msa1170180:CDS
ATTAGCATCTAAGGCTCTCG+AGG 0.629832 7_4:-63327219 Msa1170180:CDS
TGGAAGTGAAATCGAAGTCG+AGG 0.637979 7_4:+63329161 None:intergenic
CCATCACCAGTATCCCGGCA+TGG 0.641754 7_4:-63323474 Msa1170180:CDS
TTGATTGAAACTGTTCCATG+AGG 0.645308 7_4:+63327888 None:intergenic
TGGTTCAGAGGTCTACATTG+GGG 0.645914 7_4:-63327445 Msa1170180:CDS
CAGAGTTCTAGCCGTAATCG+GGG 0.647049 7_4:-63326652 Msa1170180:CDS
CAAAGCCGAAAATTAATCTG+TGG 0.647057 7_4:-63323335 Msa1170180:three_prime_UTR
TAGAAGCTCTACAACTACAA+TGG 0.656732 7_4:+63329184 None:intergenic
CGATTACGGCTAGAACTCTG+TGG 0.668127 7_4:+63326655 None:intergenic
GTTCCACCGAAATGACTCCA+GGG 0.672546 7_4:+63326870 None:intergenic
TAGACCTCTGAACCATGAGG+TGG 0.673055 7_4:+63327453 None:intergenic
AGTGCTCTAAGCCTACAGAT+GGG 0.674526 7_4:+63323162 None:intergenic
GGTTCAGAGGTCTACATTGG+GGG 0.681072 7_4:-63327444 Msa1170180:CDS
ACCATACCATAACCAAGAGG+AGG 0.682760 7_4:+63324341 None:intergenic
GTTCCATGAGGTATGGACCA+AGG 0.688815 7_4:+63327900 None:intergenic
TGATCAAGAGGAATCAAGCG+AGG 0.690783 7_4:-63327616 Msa1170180:CDS
GCTCCCGGACCATACATCAG+TGG 0.700475 7_4:+63323726 None:intergenic
TATGAAGGGAAAGAAGCCAA+AGG 0.715417 7_4:-63327272 Msa1170180:CDS
CATGTAATAGGTCACCTGAG+AGG 0.716127 7_4:+63326492 None:intergenic
TGAGCAGGTAGATCTTGATG+GGG 0.733370 7_4:-63327643 Msa1170180:CDS
ATGTAGACCTCTGAACCATG+AGG 0.739451 7_4:+63327450 None:intergenic
CCAACCATACCATAACCAAG+AGG 0.748224 7_4:+63324338 None:intergenic
CGAAATTCAGAGTCACCAGG+GGG 0.748282 7_4:-63327699 Msa1170180:CDS
ACGAATTCACTATTTCTCGG+CGG 0.751684 7_4:+63329267 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGATTTTTTTTTTTTTGTTG+TGG + chr7_4:63323577-63323596 None:intergenic 15.0%
!! AACATACATAATTACAATAA+AGG + chr7_4:63324175-63324194 None:intergenic 15.0%
!! ACATATAATAGAAAAATTGT+TGG + chr7_4:63325533-63325552 None:intergenic 15.0%
!! ATAGTTTAAGTAACAAAAAA+AGG + chr7_4:63325594-63325613 None:intergenic 15.0%
!!! TAGAAGTAACTTTTTTTTTA+TGG + chr7_4:63326686-63326705 None:intergenic 15.0%
!! GAATAAATTTAGAAACAAAT+TGG - chr7_4:63327180-63327199 Msa1170180:intron 15.0%
!! AAAGAAATCAATAATTCATT+AGG + chr7_4:63327530-63327549 None:intergenic 15.0%
!! ATTCTATTGAATATCTTTAT+GGG - chr7_4:63328500-63328519 Msa1170180:intron 15.0%
!!! TTTTATTCTTGTAATTTGTA+AGG - chr7_4:63329283-63329302 Msa1170180:five_prime_UTR 15.0%
!!! CTTTTTTTTTTGGATAAACA+TGG - chr7_4:63323386-63323405 Msa1170180:CDS 20.0%
!! AATAAGGTAAAAAAAAGATG+AGG + chr7_4:63323488-63323507 None:intergenic 20.0%
!!! AATCTAGAGATTTTCTTTAA+AGG - chr7_4:63323513-63323532 Msa1170180:intron 20.0%
!!! TTTTTTTTTCAAAAACAGAG+AGG + chr7_4:63323637-63323656 None:intergenic 20.0%
!!! TTATTTTGAAGTGTTTGTTT+AGG + chr7_4:63323676-63323695 None:intergenic 20.0%
!! AAAAATAAAGTAAGAACAAC+AGG - chr7_4:63323948-63323967 Msa1170180:intron 20.0%
!!! TTTTTTCATTTATAAACGTG+TGG - chr7_4:63324198-63324217 Msa1170180:intron 20.0%
!!! AAACTTCTGAAAAAGATTTA+AGG - chr7_4:63324954-63324973 Msa1170180:intron 20.0%
!!! AACTTCTGAAAAAGATTTAA+GGG - chr7_4:63324955-63324974 Msa1170180:intron 20.0%
!!! TTGTCATTTTCTGTAATATT+TGG - chr7_4:63325212-63325231 Msa1170180:intron 20.0%
!!! AAATATTTTATCCATTAAGC+TGG - chr7_4:63325310-63325329 Msa1170180:intron 20.0%
!! TTAAGTAACAAAAAAAGGAA+AGG + chr7_4:63325589-63325608 None:intergenic 20.0%
!! AATGTACAAAATTGAAAGTT+GGG + chr7_4:63326227-63326246 None:intergenic 20.0%
!! TAATGTACAAAATTGAAAGT+TGG + chr7_4:63326228-63326247 None:intergenic 20.0%
!!! ATTTTGTACATTACCATAAA+TGG - chr7_4:63326235-63326254 Msa1170180:intron 20.0%
!! TTGAAATGTTTAAACAAACA+CGG - chr7_4:63326899-63326918 Msa1170180:CDS 20.0%
!! TATTAAGGTTAAGGTAAAAA+TGG + chr7_4:63327216-63327235 None:intergenic 20.0%
!!! TTTTACCTTAACCTTAATAA+TGG - chr7_4:63327217-63327236 Msa1170180:CDS 20.0%
!! TCATTAATCTCAAAAAAATG+AGG - chr7_4:63328142-63328161 Msa1170180:intron 20.0%
!! CATTAATCTCAAAAAAATGA+GGG - chr7_4:63328143-63328162 Msa1170180:intron 20.0%
!!! GAATTTTTATGTTCTTCTAA+AGG + chr7_4:63328227-63328246 None:intergenic 20.0%
!! CATTCTATTGAATATCTTTA+TGG - chr7_4:63328499-63328518 Msa1170180:intron 20.0%
!! TTCTATTGAATATCTTTATG+GGG - chr7_4:63328501-63328520 Msa1170180:intron 20.0%
!! TACATTAGTAAGGATTATAT+CGG + chr7_4:63328985-63329004 None:intergenic 20.0%
!! AATAAAAAAAACTTCACTCA+CGG + chr7_4:63329270-63329289 None:intergenic 20.0%
! TAAATAGAACAATCATGCTA+TGG - chr7_4:63323318-63323337 Msa1170180:three_prime_UTR 25.0%
!!! CATAGCATAGCTTTTTTTTT+TGG - chr7_4:63323376-63323395 Msa1170180:exon 25.0%
!! GTAATGTTTAAGTTCATGTT+TGG - chr7_4:63323440-63323459 Msa1170180:CDS 25.0%
! TTAAGTTCATGTTTGGATTA+CGG - chr7_4:63323447-63323466 Msa1170180:CDS 25.0%
! ATCTCTAGATTACAGTAATA+AGG + chr7_4:63323504-63323523 None:intergenic 25.0%
!!! GTTTGTTTAGGATTTTTTTG+GGG + chr7_4:63323742-63323761 None:intergenic 25.0%
!!! CGTTTGTTTAGGATTTTTTT+GGG + chr7_4:63323743-63323762 None:intergenic 25.0%
!! TTTTTATAGCAGAATCACAT+TGG - chr7_4:63323778-63323797 Msa1170180:intron 25.0%
!!! CATTGGTTTAAATTTAGACA+TGG - chr7_4:63323795-63323814 Msa1170180:intron 25.0%
! TAGTTATACCACAATTTAAC+TGG - chr7_4:63324291-63324310 Msa1170180:CDS 25.0%
! ATTCTGAATGAAAAATCAAG+AGG + chr7_4:63324403-63324422 None:intergenic 25.0%
!! TCATTTTCTGTAATATTTGG+TGG - chr7_4:63325215-63325234 Msa1170180:intron 25.0%
! AACTGATTATTAACAAGTCA+TGG - chr7_4:63325248-63325267 Msa1170180:intron 25.0%
! TGGTATAAAACTCATGTAAT+AGG + chr7_4:63325887-63325906 None:intergenic 25.0%
!! TTTTTCTCTTTATTACCTTG+CGG + chr7_4:63325943-63325962 None:intergenic 25.0%
! AAGAGAAAAAACTTAAGTGT+AGG - chr7_4:63325953-63325972 Msa1170180:intron 25.0%
!! TGTTGGAAATGTTTGAAATA+TGG + chr7_4:63326044-63326063 None:intergenic 25.0%
! AAGTAAAATGGAAGTAGAAT+AGG + chr7_4:63326073-63326092 None:intergenic 25.0%
! TAGGTTAAGATTGAAAAAAG+GGG + chr7_4:63326103-63326122 None:intergenic 25.0%
! CTAGGTTAAGATTGAAAAAA+GGG + chr7_4:63326104-63326123 None:intergenic 25.0%
! TCTAGGTTAAGATTGAAAAA+AGG + chr7_4:63326105-63326124 None:intergenic 25.0%
!! ATGTAATTTTCAAAATGCAC+AGG - chr7_4:63326194-63326213 Msa1170180:intron 25.0%
! ATGTACAAAATTGAAAGTTG+GGG + chr7_4:63326226-63326245 None:intergenic 25.0%
!!! TCAATTTTTGGACAAAAATC+AGG - chr7_4:63326276-63326295 Msa1170180:intron 25.0%
!! ATGTGACAAATTGAAGTTTT+GGG - chr7_4:63326594-63326613 Msa1170180:CDS 25.0%
! ATTCTTCCATTTATTGAAAG+TGG - chr7_4:63326619-63326638 Msa1170180:CDS 25.0%
!! ATACTCTAATGAGATGTTTT+AGG + chr7_4:63327009-63327028 None:intergenic 25.0%
! TTACATGATCTTAATTAGCA+TGG - chr7_4:63327260-63327279 Msa1170180:CDS 25.0%
! AATAATTCATTAGGAACAAC+AGG + chr7_4:63327521-63327540 None:intergenic 25.0%
! TGGAAAACAGTATTCAAAAA+GGG + chr7_4:63327848-63327867 None:intergenic 25.0%
! TTGGAAAACAGTATTCAAAA+AGG + chr7_4:63327849-63327868 None:intergenic 25.0%
! TGTCATTAAGAAACATAGAT+TGG + chr7_4:63327868-63327887 None:intergenic 25.0%
! CAAAAAAGACTAAAACTAGA+AGG + chr7_4:63328119-63328138 None:intergenic 25.0%
! TTTCTTCAATTGATTGTTGA+TGG - chr7_4:63328346-63328365 Msa1170180:intron 25.0%
! TTCTTCAATTGATTGTTGAT+GGG - chr7_4:63328347-63328366 Msa1170180:intron 25.0%
! TTAAGTGTTCGAAATTTCAA+TGG - chr7_4:63328463-63328482 Msa1170180:intron 25.0%
! TTATTAAGCCTAAAAGAACT+TGG - chr7_4:63328556-63328575 Msa1170180:intron 25.0%
! ATGTATTGTAAGTTTCATCT+TGG - chr7_4:63328717-63328736 Msa1170180:intron 25.0%
! TAGGAACAATTACATTAGTA+AGG + chr7_4:63328995-63329014 None:intergenic 25.0%
! TCAACTAGTTCAAACAAATA+GGG - chr7_4:63329243-63329262 Msa1170180:five_prime_UTR 25.0%
!! TTTAAGTCTAAGATTCTACT+TGG - chr7_4:63329326-63329345 Msa1170180:five_prime_UTR 25.0%
!! GAGTTGATGTTGATGTATAA+AGG - chr7_4:63323028-63323047 Msa1170180:three_prime_UTR 30.0%
AAAAAAAGATGAGGTTTGTG+AGG + chr7_4:63323479-63323498 None:intergenic 30.0%
!!! GCGTTTGTTTAGGATTTTTT+TGG + chr7_4:63323744-63323763 None:intergenic 30.0%
ATGGTTTGATAGGAGAATAA+GGG + chr7_4:63324076-63324095 None:intergenic 30.0%
GGATAGCATATTTGGATAAT+GGG + chr7_4:63324108-63324127 None:intergenic 30.0%
AGGATAGCATATTTGGATAA+TGG + chr7_4:63324109-63324128 None:intergenic 30.0%
TATCATACAATGAAGCTCAT+AGG + chr7_4:63324129-63324148 None:intergenic 30.0%
TTGTGGTATAACTATTTGTC+AGG + chr7_4:63324285-63324304 None:intergenic 30.0%
!! AATTTTGGCCAGTTAAATTG+TGG + chr7_4:63324302-63324321 None:intergenic 30.0%
! TTTAACTGGCCAAAATTTTC+TGG - chr7_4:63324305-63324324 Msa1170180:CDS 30.0%
! TTAACTGGCCAAAATTTTCT+GGG - chr7_4:63324306-63324325 Msa1170180:CDS 30.0%
TTTAGACAGTCATGTAAAAG+GGG + chr7_4:63325045-63325064 None:intergenic 30.0%
GTTTAGACAGTCATGTAAAA+GGG + chr7_4:63325046-63325065 None:intergenic 30.0%
TTACCTATGCAAAAGTCAAT+CGG + chr7_4:63325068-63325087 None:intergenic 30.0%
!! ATTGACTTTTGCATAGGTAA+GGG - chr7_4:63325068-63325087 Msa1170180:intron 30.0%
!! ACTCTGAATTCAAGGTATTT+TGG - chr7_4:63325177-63325196 Msa1170180:intron 30.0%
TAAATATGAAACAGCTAGCT+AGG + chr7_4:63325683-63325702 None:intergenic 30.0%
! TTTTCTCTTTATTACCTTGC+GGG + chr7_4:63325942-63325961 None:intergenic 30.0%
TTGTTATATCTGTTTGTGTG+TGG - chr7_4:63325976-63325995 Msa1170180:intron 30.0%
AATATGGCAGTGGAATAATA+TGG + chr7_4:63326028-63326047 None:intergenic 30.0%
! AAATGTTTGAAATATGGCAG+TGG + chr7_4:63326038-63326057 None:intergenic 30.0%
AGTAGAATAGGTTATGTTGT+TGG + chr7_4:63326061-63326080 None:intergenic 30.0%
TTAAGATTGAAAAAAGGGGT+GGG + chr7_4:63326099-63326118 None:intergenic 30.0%
!!! TTTTTTTCATGTCAAGTGAC+TGG + chr7_4:63326307-63326326 None:intergenic 30.0%
TCACTTGACATGAAAAAAAG+AGG - chr7_4:63326308-63326327 Msa1170180:intron 30.0%
! GAAAAAAAGAGGTACATGAA+TGG - chr7_4:63326319-63326338 Msa1170180:intron 30.0%
!! TGGGTTTTATAATGGTACAT+TGG + chr7_4:63326363-63326382 None:intergenic 30.0%
!! TGTCAAAGTGGGTTTTATAA+TGG + chr7_4:63326371-63326390 None:intergenic 30.0%
!! TTTTTCAAAGCTCAGTGTAA+GGG + chr7_4:63326398-63326417 None:intergenic 30.0%
!! ATTTTTCAAAGCTCAGTGTA+AGG + chr7_4:63326399-63326418 None:intergenic 30.0%
ACTTCTTCTAATACGTATCA+TGG - chr7_4:63326472-63326491 Msa1170180:intron 30.0%
! CATGTGACAAATTGAAGTTT+TGG - chr7_4:63326593-63326612 Msa1170180:CDS 30.0%
AGAAATAATTTGACTGCGTA+TGG + chr7_4:63326819-63326838 None:intergenic 30.0%
AAGAAAGCTATTTAGACTAC+AGG - chr7_4:63327091-63327110 Msa1170180:intron 30.0%
AACAGAGCTTAGACATAAAA+AGG - chr7_4:63327114-63327133 Msa1170180:intron 30.0%
GTGATCCATTATTAAGGTTA+AGG + chr7_4:63327225-63327244 None:intergenic 30.0%
TTACTGGTGATCCATTATTA+AGG + chr7_4:63327231-63327250 None:intergenic 30.0%
CTAATTAAGATCATGTAACC+TGG + chr7_4:63327258-63327277 None:intergenic 30.0%
TTAATGTTGGCAACAAAATG+AGG + chr7_4:63327382-63327401 None:intergenic 30.0%
CAGAAAGCAAACATTAATGT+TGG + chr7_4:63327395-63327414 None:intergenic 30.0%
!! AATGAAGGCATTGAAGAATA+CGG - chr7_4:63327791-63327810 Msa1170180:five_prime_UTR 30.0%
AATCTCAAAAAAATGAGGGT+TGG - chr7_4:63328147-63328166 Msa1170180:intron 30.0%
ATCTCAAAAAAATGAGGGTT+GGG - chr7_4:63328148-63328167 Msa1170180:intron 30.0%
! TCGTGAAAATTTTATCCAGT+TGG - chr7_4:63328257-63328276 Msa1170180:intron 30.0%
! CGTGAAAATTTTATCCAGTT+GGG - chr7_4:63328258-63328277 Msa1170180:intron 30.0%
TTGAACTGTATCAATTTCAC+TGG - chr7_4:63328292-63328311 Msa1170180:intron 30.0%
AAGAGGTTAACATCAATTCT+TGG - chr7_4:63328400-63328419 Msa1170180:intron 30.0%
TATTTGTTTATGCTCTTGCA+TGG - chr7_4:63328754-63328773 Msa1170180:intron 30.0%
TTGTTTCACTAGCATAACAA+CGG - chr7_4:63328795-63328814 Msa1170180:intron 30.0%
GATAGAAACTCAACTATAGA+TGG + chr7_4:63328823-63328842 None:intergenic 30.0%
ACTAATGTAATTGTTCCTAC+TGG - chr7_4:63328996-63329015 Msa1170180:intron 30.0%
! ACAGATTAATTTTCGGCTTT+GGG + chr7_4:63329030-63329049 None:intergenic 30.0%
! ACATGCCACAGATTAATTTT+CGG + chr7_4:63329037-63329056 None:intergenic 30.0%
TATGAGAAAATTTGCAGAAC+AGG - chr7_4:63329056-63329075 Msa1170180:intron 30.0%
AGATAAGGGTAAAAAATGCA+AGG + chr7_4:63329136-63329155 None:intergenic 30.0%
AATAAATTGCTTCCCATCAT+AGG + chr7_4:63329162-63329181 None:intergenic 30.0%
CTCAACTAGTTCAAACAAAT+AGG - chr7_4:63329242-63329261 Msa1170180:five_prime_UTR 30.0%
CAACTAGTTCAAACAAATAG+GGG - chr7_4:63329244-63329263 Msa1170180:five_prime_UTR 30.0%
! TGGACGAATTCACTATTTCT+CGG + chr7_4:63323103-63323122 None:intergenic 35.0%
TAGAAGCTCTACAACTACAA+TGG + chr7_4:63323183-63323202 None:intergenic 35.0%
! CAATATCTAGAGCTTAAGAG+GGG + chr7_4:63323247-63323266 None:intergenic 35.0%
! GCAATATCTAGAGCTTAAGA+GGG + chr7_4:63323248-63323267 None:intergenic 35.0%
! AGCAATATCTAGAGCTTAAG+AGG + chr7_4:63323249-63323268 None:intergenic 35.0%
TGCTATAAAAACACACCCAA+AGG + chr7_4:63323769-63323788 None:intergenic 35.0%
CATGGTTTGATAGGAGAATA+AGG + chr7_4:63324077-63324096 None:intergenic 35.0%
CTTATTCTCCTATCAAACCA+TGG - chr7_4:63324075-63324094 Msa1170180:intron 35.0%
AGCTCATAGGATAGCATATT+TGG + chr7_4:63324116-63324135 None:intergenic 35.0%
AATATACACAGAGGAAGAGA+GGG + chr7_4:63324257-63324276 None:intergenic 35.0%
AAATATACACAGAGGAAGAG+AGG + chr7_4:63324258-63324277 None:intergenic 35.0%
!! CCAAAATTTTCTGGGAAACT+CGG - chr7_4:63324314-63324333 Msa1170180:CDS 35.0%
AGAGGATAACAATGCTCAAA+AGG + chr7_4:63324385-63324404 None:intergenic 35.0%
GCAACAAAAGTAAGAAAGAC+AGG + chr7_4:63324435-63324454 None:intergenic 35.0%
TTGATTGAAACTGTTCCATG+AGG + chr7_4:63324479-63324498 None:intergenic 35.0%
AAGAAGAGAGTTTGCAAATG+TGG + chr7_4:63324545-63324564 None:intergenic 35.0%
TTCTAGATTCATAGAATGCC+TGG - chr7_4:63324617-63324636 Msa1170180:CDS 35.0%
TCTAGATTCATAGAATGCCT+GGG - chr7_4:63324618-63324637 Msa1170180:CDS 35.0%
AGTTGAGTATGAAGAAGTAG+AGG - chr7_4:63324775-63324794 Msa1170180:intron 35.0%
!!! TCTTTTTCAGAAGTTTCGTG+AGG + chr7_4:63324950-63324969 None:intergenic 35.0%
TTAGACAGTCATGTAAAAGG+GGG + chr7_4:63325044-63325063 None:intergenic 35.0%
GGTTTAGACAGTCATGTAAA+AGG + chr7_4:63325047-63325066 None:intergenic 35.0%
!! AAACCGATTGACTTTTGCAT+AGG - chr7_4:63325062-63325081 Msa1170180:intron 35.0%
!! GATTGACTTTTGCATAGGTA+AGG - chr7_4:63325067-63325086 Msa1170180:intron 35.0%
! TTTTGTGACCTTCAAGACAA+AGG - chr7_4:63325121-63325140 Msa1170180:intron 35.0%
TGCTAATTCCTTTGTCTTGA+AGG + chr7_4:63325132-63325151 None:intergenic 35.0%
GACAAAGGAATTAGCATCTA+AGG - chr7_4:63325136-63325155 Msa1170180:intron 35.0%
GTTGAACAACTCTGAATTCA+AGG - chr7_4:63325169-63325188 Msa1170180:intron 35.0%
!!! AGCACTTTATTTTTCTTCCC+TGG + chr7_4:63325383-63325402 None:intergenic 35.0%
!! GTTAAGCATCGGTTATTCAT+TGG - chr7_4:63325414-63325433 Msa1170180:intron 35.0%
!! TTGGTAATGTTCCTAAAGAG+TGG - chr7_4:63325433-63325452 Msa1170180:intron 35.0%
GACTGTAGAAGATATGAAGA+AGG - chr7_4:63325455-63325474 Msa1170180:intron 35.0%
TATGAAGTGTGTTGCATGTT+GGG - chr7_4:63325611-63325630 Msa1170180:intron 35.0%
ATGTTGGGTAATATTTGCCT+TGG - chr7_4:63325626-63325645 Msa1170180:intron 35.0%
! GCTAGCTGTTTCATATTTAC+AGG - chr7_4:63325684-63325703 Msa1170180:intron 35.0%
TAAAAGCAAATCCCCGATTA+CGG + chr7_4:63325726-63325745 None:intergenic 35.0%
ATGCTTGTGCAGAATATTCA+AGG - chr7_4:63325761-63325780 Msa1170180:intron 35.0%
ATGATGATTCAGAATTCCTC+GGG + chr7_4:63325849-63325868 None:intergenic 35.0%
GATGATGATTCAGAATTCCT+CGG + chr7_4:63325850-63325869 None:intergenic 35.0%
TAAGATTGAAAAAAGGGGTG+GGG + chr7_4:63326098-63326117 None:intergenic 35.0%
GTTAAGATTGAAAAAAGGGG+TGG + chr7_4:63326100-63326119 None:intergenic 35.0%
TTCTGCTATTGTCTATGTCT+AGG + chr7_4:63326122-63326141 None:intergenic 35.0%
TAGACATAGACAATAGCAGA+AGG - chr7_4:63326121-63326140 Msa1170180:intron 35.0%
GTACTTAGAGCAAAGTTGAA+GGG + chr7_4:63326165-63326184 None:intergenic 35.0%
TGTACTTAGAGCAAAGTTGA+AGG + chr7_4:63326166-63326185 None:intergenic 35.0%
!!! CCAATGGTTTTAGCCATTTA+TGG + chr7_4:63326251-63326270 None:intergenic 35.0%
CCATAAATGGCTAAAACCAT+TGG - chr7_4:63326248-63326267 Msa1170180:intron 35.0%
CCAAAAATTGACAAAGCCAA+TGG + chr7_4:63326267-63326286 None:intergenic 35.0%
!!! CCATTGGCTTTGTCAATTTT+TGG - chr7_4:63326264-63326283 Msa1170180:intron 35.0%
GTAAGGGATAATGTCAAAGT+GGG + chr7_4:63326382-63326401 None:intergenic 35.0%
TGTAAGGGATAATGTCAAAG+TGG + chr7_4:63326383-63326402 None:intergenic 35.0%
ATAAACGCAAGGGAATTTCA+GGG + chr7_4:63326437-63326456 None:intergenic 35.0%
TATTAGAAGAAGTCTGTTGG+AGG + chr7_4:63326465-63326484 None:intergenic 35.0%
ACGTATTAGAAGAAGTCTGT+TGG + chr7_4:63326468-63326487 None:intergenic 35.0%
!! GTTAGAGTTGATGATGTTCT+TGG + chr7_4:63326502-63326521 None:intergenic 35.0%
TCAAAATGTCAGCAAGCAAT+TGG + chr7_4:63326557-63326576 None:intergenic 35.0%
!! GTCTTGCCACTTTCAATAAA+TGG + chr7_4:63326628-63326647 None:intergenic 35.0%
AAGACTAAAATGCTGAGTTG+AGG - chr7_4:63326643-63326662 Msa1170180:CDS 35.0%
! AGACTAAAATGCTGAGTTGA+GGG - chr7_4:63326644-63326663 Msa1170180:CDS 35.0%
AGATGAGTCATGAGAAAGAA+TGG + chr7_4:63326795-63326814 None:intergenic 35.0%
!!! CAGTTTTGTTCTGTGTATGT+CGG + chr7_4:63327046-63327065 None:intergenic 35.0%
AGAGCTTAGACATAAAAAGG+AGG - chr7_4:63327117-63327136 Msa1170180:intron 35.0%
! AAAAATAGAGCATCAAGCAG+TGG + chr7_4:63327290-63327309 None:intergenic 35.0%
!! TTTCCATTTTGTGTGCTGAT+TGG - chr7_4:63327308-63327327 Msa1170180:intron 35.0%
AAATTTCCTGATCCAGTAAG+AGG + chr7_4:63327340-63327359 None:intergenic 35.0%
TTTCGAAGAAGCGATATCTT+TGG - chr7_4:63327419-63327438 Msa1170180:CDS 35.0%
TTGCAGTTGCAAATAGACAA+AGG + chr7_4:63327473-63327492 None:intergenic 35.0%
CTGCAATTAGTTGAACCAAA+TGG - chr7_4:63327487-63327506 Msa1170180:CDS 35.0%
!! TAAGTTTTATAACCGTGACC+TGG - chr7_4:63327589-63327608 Msa1170180:CDS 35.0%
! TCTGAGTTATGTTTTCTGGA+AGG + chr7_4:63327650-63327669 None:intergenic 35.0%
! CGATTCTGAGTTATGTTTTC+TGG + chr7_4:63327654-63327673 None:intergenic 35.0%
AAAGAGCTGTTTGAACATCA+TGG - chr7_4:63327678-63327697 Msa1170180:CDS 35.0%
TCATGGAAAGATCACAAAAG+TGG - chr7_4:63327695-63327714 Msa1170180:CDS 35.0%
!! GTTTTGTTCACTTTGCTGAT+AGG - chr7_4:63327760-63327779 Msa1170180:five_prime_UTR 35.0%
! ACGGAGAAGTATGAAATTGA+TGG - chr7_4:63327810-63327829 Msa1170180:five_prime_UTR 35.0%
! ACTGTAACCATCAAGTTTTC+TGG - chr7_4:63327892-63327911 Msa1170180:five_prime_UTR 35.0%
!! AACCATCAAGTTTTCTGGAA+TGG - chr7_4:63327897-63327916 Msa1170180:five_prime_UTR 35.0%
TCTCAAAAAAATGAGGGTTG+GGG - chr7_4:63328149-63328168 Msa1170180:intron 35.0%
CAAAACATAAATCACCCAAC+TGG + chr7_4:63328275-63328294 None:intergenic 35.0%
! TCAATTTCACTGGTTGTAAG+TGG - chr7_4:63328302-63328321 Msa1170180:intron 35.0%
!! TGTAAGTGGTTCTGAACTTT+CGG - chr7_4:63328316-63328335 Msa1170180:intron 35.0%
! CATAAGCACCAAGTTCTTTT+AGG + chr7_4:63328567-63328586 None:intergenic 35.0%
!! AAAAGAACTTGGTGCTTATG+TGG - chr7_4:63328567-63328586 Msa1170180:intron 35.0%
! ATCTTCTTGTTTGTGACTGT+AGG - chr7_4:63328840-63328859 Msa1170180:intron 35.0%
AACGATAATAACCGTAATCG+TGG - chr7_4:63328953-63328972 Msa1170180:intron 35.0%
!! AGATTAATTTTCGGCTTTGG+GGG + chr7_4:63329028-63329047 None:intergenic 35.0%
! CAGATTAATTTTCGGCTTTG+GGG + chr7_4:63329029-63329048 None:intergenic 35.0%
! CACAGATTAATTTTCGGCTT+TGG + chr7_4:63329031-63329050 None:intergenic 35.0%
CAAAGCCGAAAATTAATCTG+TGG - chr7_4:63329029-63329048 Msa1170180:intron 35.0%
AAAATTTGCAGAACAGGCAT+AGG - chr7_4:63329062-63329081 Msa1170180:intron 35.0%
! ACCCTTATCTTTTCCTATGA+TGG - chr7_4:63329146-63329165 Msa1170180:intron 35.0%
CCCATCATAGGAAAAGATAA+GGG + chr7_4:63329150-63329169 None:intergenic 35.0%
! CCCTTATCTTTTCCTATGAT+GGG - chr7_4:63329147-63329166 Msa1170180:intron 35.0%
TCCCATCATAGGAAAAGATA+AGG + chr7_4:63329151-63329170 None:intergenic 35.0%
ATAATCTTACTCCCATCTGT+AGG - chr7_4:63329191-63329210 Msa1170180:five_prime_UTR 35.0%
!!! ATTCTACTTGGTGCCAATTT+TGG - chr7_4:63329338-63329357 Msa1170180:five_prime_UTR 35.0%
! TTAAACTAGCCTGCCAAAAT+TGG + chr7_4:63329354-63329373 None:intergenic 35.0%
! ACGAATTCACTATTTCTCGG+CGG + chr7_4:63323100-63323119 None:intergenic 40.0%
AACCCTAAACTCGTAATCGT+TGG + chr7_4:63323146-63323165 None:intergenic 40.0%
CTTCGATTTCACTTCCAATC+AGG - chr7_4:63323209-63323228 Msa1170180:three_prime_UTR 40.0%
TAGAGCTTAAGAGGGGAAAA+CGG + chr7_4:63323240-63323259 None:intergenic 40.0%
TCCTAAACAAACGCATCCTT+TGG - chr7_4:63323750-63323769 Msa1170180:intron 40.0%
CCTAAACAAACGCATCCTTT+GGG - chr7_4:63323751-63323770 Msa1170180:intron 40.0%
ACATGGTTCTTGTCTCAGAA+TGG - chr7_4:63323812-63323831 Msa1170180:intron 40.0%
TCAAGAAGTAACGCTTCCTT+AGG - chr7_4:63323846-63323865 Msa1170180:intron 40.0%
CAAGAAGTAACGCTTCCTTA+GGG - chr7_4:63323847-63323866 Msa1170180:intron 40.0%
!! TGTGTTTGCGAGTTGGATTT+TGG - chr7_4:63323870-63323889 Msa1170180:intron 40.0%
!! TTTGCGAGTTGGATTTTGGA+GGG - chr7_4:63323874-63323893 Msa1170180:intron 40.0%
TTTGGGAGTTGAATTGTGGA+GGG + chr7_4:63324049-63324068 None:intergenic 40.0%
TGTGTTTGGGAGTTGAATTG+TGG + chr7_4:63324053-63324072 None:intergenic 40.0%
! AGGAGAATAAGGGTGTGTTT+GGG + chr7_4:63324066-63324085 None:intergenic 40.0%
! TAGGAGAATAAGGGTGTGTT+TGG + chr7_4:63324067-63324086 None:intergenic 40.0%
GTTGCAAACCATGGTTTGAT+AGG + chr7_4:63324086-63324105 None:intergenic 40.0%
ATATACACAGAGGAAGAGAG+GGG + chr7_4:63324256-63324275 None:intergenic 40.0%
CAGGAGACAAATATACACAG+AGG + chr7_4:63324266-63324285 None:intergenic 40.0%
! CCGAGTTTCCCAGAAAATTT+TGG + chr7_4:63324317-63324336 None:intergenic 40.0%
TTTGTTGCTATGCTACTCCT+TGG - chr7_4:63324447-63324466 Msa1170180:CDS 40.0%
TGAAACTGTTCCATGAGGTA+TGG + chr7_4:63324474-63324493 None:intergenic 40.0%
TCTTACTCTGCTATTCCATC+TGG - chr7_4:63324502-63324521 Msa1170180:intron 40.0%
ATGTGGAAAGGTGGAAACAA+TGG + chr7_4:63324528-63324547 None:intergenic 40.0%
AGTTTGCAAATGTGGAAAGG+TGG + chr7_4:63324537-63324556 None:intergenic 40.0%
GAGAGTTTGCAAATGTGGAA+AGG + chr7_4:63324540-63324559 None:intergenic 40.0%
CTCTCTTCTTTGTATGCTTC+TGG - chr7_4:63324555-63324574 Msa1170180:CDS 40.0%
TCTAGAAAAGCAAGCTTGCA+GGG + chr7_4:63324604-63324623 None:intergenic 40.0%
ATCTAGAAAAGCAAGCTTGC+AGG + chr7_4:63324605-63324624 None:intergenic 40.0%
TGAGTATGAAGAAGTAGAGG+TGG - chr7_4:63324778-63324797 Msa1170180:intron 40.0%
AGAAGAAGAGGAAGAAGTAG+AGG - chr7_4:63324820-63324839 Msa1170180:intron 40.0%
GCCTCATCTTCTTCATCTAA+GGG + chr7_4:63324857-63324876 None:intergenic 40.0%
AGCCTCATCTTCTTCATCTA+AGG + chr7_4:63324858-63324877 None:intergenic 40.0%
ATGGTTCAGAGGTCTACATT+GGG - chr7_4:63324918-63324937 Msa1170180:intron 40.0%
! AAGGGTCTTTTGTCAATCTG+TGG - chr7_4:63324973-63324992 Msa1170180:intron 40.0%
! AGGGTCTTTTGTCAATCTGT+GGG - chr7_4:63324974-63324993 Msa1170180:intron 40.0%
TGCATAGGTAAGGGTTATGA+AGG - chr7_4:63325077-63325096 Msa1170180:intron 40.0%
GCATAGGTAAGGGTTATGAA+GGG - chr7_4:63325078-63325097 Msa1170180:intron 40.0%
TATGAAGGGAAAGAAGCCAA+AGG - chr7_4:63325092-63325111 Msa1170180:intron 40.0%
! GGTCACAAAAGCATAACCTT+TGG + chr7_4:63325111-63325130 None:intergenic 40.0%
CACCATCTCAAGTTAAGCAT+CGG - chr7_4:63325403-63325422 Msa1170180:intron 40.0%
! AACCGATGCTTAACTTGAGA+TGG + chr7_4:63325408-63325427 None:intergenic 40.0%
TCTTCTACAGTCCACTCTTT+AGG + chr7_4:63325447-63325466 None:intergenic 40.0%
TATGAAGAAGGTTGTTGCCA+AGG - chr7_4:63325467-63325486 Msa1170180:intron 40.0%
CTATGAAGTGTGTTGCATGT+TGG - chr7_4:63325610-63325629 Msa1170180:intron 40.0%
ACACAAAATGCAAGTAGCCA+AGG + chr7_4:63325646-63325665 None:intergenic 40.0%
ATAACGATGCAATAGTGAGC+TGG - chr7_4:63325818-63325837 Msa1170180:intron 40.0%
TAACGATGCAATAGTGAGCT+GGG - chr7_4:63325819-63325838 Msa1170180:intron 40.0%
TGAATCATCATCATCCTCTC+AGG - chr7_4:63325858-63325877 Msa1170180:intron 40.0%
AATGGCTGATGTAGGCAATT+TGG - chr7_4:63326337-63326356 Msa1170180:intron 40.0%
CATAAACGCAAGGGAATTTC+AGG + chr7_4:63326438-63326457 None:intergenic 40.0%
CTGAAATTCCCTTGCGTTTA+TGG - chr7_4:63326436-63326455 Msa1170180:intron 40.0%
CTAACCACATCAACTGTCAA+AGG - chr7_4:63326517-63326536 Msa1170180:CDS 40.0%
! TTGTCCTTTGACAGTTGATG+TGG + chr7_4:63326524-63326543 None:intergenic 40.0%
! GACTAAAATGCTGAGTTGAG+GGG - chr7_4:63326645-63326664 Msa1170180:CDS 40.0%
! ACTAAAATGCTGAGTTGAGG+GGG - chr7_4:63326646-63326665 Msa1170180:CDS 40.0%
CATGTAACCTGGCAATTTAC+TGG + chr7_4:63327247-63327266 None:intergenic 40.0%
! CAACAGGAAAGTACACCATT+TGG + chr7_4:63327505-63327524 None:intergenic 40.0%
!! TTTTCTTGTCCAGCTTTAGC+AGG + chr7_4:63327729-63327748 None:intergenic 40.0%
GGACAAGAAAAGAGCAGATA+TGG - chr7_4:63327738-63327757 Msa1170180:exon 40.0%
TGATAGGTCAAGTGCAATGA+AGG - chr7_4:63327776-63327795 Msa1170180:five_prime_UTR 40.0%
GTCCATTCCAGAAAACTTGA+TGG + chr7_4:63327902-63327921 None:intergenic 40.0%
GAAGGTAAAGAGCAAGTTAC+CGG + chr7_4:63328101-63328120 None:intergenic 40.0%
! ATTGTAGCCAGTGTACTGAT+TGG + chr7_4:63328195-63328214 None:intergenic 40.0%
! ATGCCAATGCTTTTACCAGA+TGG - chr7_4:63328683-63328702 Msa1170180:intron 40.0%
! CTTCCATCTGGTAAAAGCAT+TGG + chr7_4:63328689-63328708 None:intergenic 40.0%
! CAATGCTTTTACCAGATGGA+AGG - chr7_4:63328687-63328706 Msa1170180:intron 40.0%
ACATATGCAATCCTTCCATC+TGG + chr7_4:63328701-63328720 None:intergenic 40.0%
GTTTATGCTCTTGCATGGTT+AGG - chr7_4:63328759-63328778 Msa1170180:intron 40.0%
AATAACCGTAATCGTGGTCA+TGG - chr7_4:63328959-63328978 Msa1170180:intron 40.0%
!! GGTTTTACGTTGGGCCTTAT+GGG + chr7_4:63323063-63323082 None:intergenic 45.0%
!! GTCCAGATGGGTTTTACGTT+GGG + chr7_4:63323072-63323091 None:intergenic 45.0%
!! TGTCCAGATGGGTTTTACGT+TGG + chr7_4:63323073-63323092 None:intergenic 45.0%
CGCCAACGATTACGAGTTTA+GGG - chr7_4:63323141-63323160 Msa1170180:three_prime_UTR 45.0%
TGGAAGTGAAATCGAAGTCG+AGG + chr7_4:63323206-63323225 None:intergenic 45.0%
!! GGAAAACGGAAGTACCTGAT+TGG + chr7_4:63323226-63323245 None:intergenic 45.0%
CCCAAAGGATGCGTTTGTTT+AGG + chr7_4:63323754-63323773 None:intergenic 45.0%
!! GTTTGCGAGTTGGATTTTGG+AGG - chr7_4:63323873-63323892 Msa1170180:intron 45.0%
!! TTGCGAGTTGGATTTTGGAG+GGG - chr7_4:63323875-63323894 Msa1170180:intron 45.0%
GTTTGGGAGTTGAATTGTGG+AGG + chr7_4:63324050-63324069 None:intergenic 45.0%
!! GGATAATGGGTTGCAAACCA+TGG + chr7_4:63324095-63324114 None:intergenic 45.0%
! GCATCTTTTTGTCTTGTCCC+AGG + chr7_4:63324638-63324657 None:intergenic 45.0%
! CCAGAATCTGTGGGTTTTTC+AGG + chr7_4:63324701-63324720 None:intergenic 45.0%
CCTGAAAAACCCACAGATTC+TGG - chr7_4:63324698-63324717 Msa1170180:CDS 45.0%
GTGAGCAGGTAGATCTTGAT+GGG - chr7_4:63324720-63324739 Msa1170180:CDS 45.0%
TGAGCAGGTAGATCTTGATG+GGG - chr7_4:63324721-63324740 Msa1170180:CDS 45.0%
TGATGGGGACAATGATCAAG+AGG - chr7_4:63324736-63324755 Msa1170180:CDS 45.0%
TGATCAAGAGGAATCAAGCG+AGG - chr7_4:63324748-63324767 Msa1170180:intron 45.0%
GTATGAAGAAGTAGAGGTGG+AGG - chr7_4:63324781-63324800 Msa1170180:intron 45.0%
AGTGGAAGAGGAAGAAGAAG+AGG - chr7_4:63324808-63324827 Msa1170180:intron 45.0%
GCCCTTAGATGAAGAAGATG+AGG - chr7_4:63324853-63324872 Msa1170180:intron 45.0%
ATGTAGACCTCTGAACCATG+AGG + chr7_4:63324917-63324936 None:intergenic 45.0%
CATGGTTCAGAGGTCTACAT+TGG - chr7_4:63324917-63324936 Msa1170180:intron 45.0%
TGGTTCAGAGGTCTACATTG+GGG - chr7_4:63324919-63324938 Msa1170180:intron 45.0%
TTGTCAATCTGTGGGAGAAG+TGG - chr7_4:63324982-63325001 Msa1170180:intron 45.0%
! ATTAGCATCTAAGGCTCTCG+AGG - chr7_4:63325145-63325164 Msa1170180:intron 45.0%
ACTACATGCAGCCAGCTTAA+TGG + chr7_4:63325324-63325343 None:intergenic 45.0%
AAGAAGGTTGTTGCCAAGGT+TGG - chr7_4:63325471-63325490 Msa1170180:intron 45.0%
CATTTCGGTGGAACTGTTGA+AGG - chr7_4:63325503-63325522 Msa1170180:intron 45.0%
TGAAACAGCTAGCTAGGTCA+AGG + chr7_4:63325677-63325696 None:intergenic 45.0%
! CACAGAGTTCTAGCCGTAAT+CGG - chr7_4:63325710-63325729 Msa1170180:intron 45.0%
! ACAGAGTTCTAGCCGTAATC+GGG - chr7_4:63325711-63325730 Msa1170180:intron 45.0%
CATGTAATAGGTCACCTGAG+AGG + chr7_4:63325875-63325894 None:intergenic 45.0%
TTCGTAAATCACTTCCCGCA+AGG - chr7_4:63325925-63325944 Msa1170180:intron 45.0%
TCTGTTTGTGTGTGGCTGAA+TGG - chr7_4:63325984-63326003 Msa1170180:intron 45.0%
GGTACATGAATGGCTGATGT+AGG - chr7_4:63326329-63326348 Msa1170180:intron 45.0%
! CTAAAATGCTGAGTTGAGGG+GGG - chr7_4:63326647-63326666 Msa1170180:CDS 45.0%
! TAAAATGCTGAGTTGAGGGG+GGG - chr7_4:63326648-63326667 Msa1170180:CDS 45.0%
CTTCATCTCAGCTCTGTTCT+GGG + chr7_4:63327074-63327093 None:intergenic 45.0%
TCTTCATCTCAGCTCTGTTC+TGG + chr7_4:63327075-63327094 None:intergenic 45.0%
TGGATCACCAGTAAATTGCC+AGG - chr7_4:63327237-63327256 Msa1170180:CDS 45.0%
CCTCCAATCAGCACACAAAA+TGG + chr7_4:63327314-63327333 None:intergenic 45.0%
!!! CCATTTTGTGTGCTGATTGG+AGG - chr7_4:63327311-63327330 Msa1170180:intron 45.0%
TTTCACCTGTACTAAGCACC+AGG + chr7_4:63327610-63327629 None:intergenic 45.0%
!!! CAAGTTTTCTGGAATGGACC+AGG - chr7_4:63327903-63327922 Msa1170180:five_prime_UTR 45.0%
GAATGGACCAGGTCAAACTT+TGG - chr7_4:63327914-63327933 Msa1170180:five_prime_UTR 45.0%
GAGCATTCCAAAGTTTGACC+TGG + chr7_4:63327924-63327943 None:intergenic 45.0%
GATGACTTCTGATCTGCTTG+TGG + chr7_4:63327957-63327976 None:intergenic 45.0%
CAAGCAGATCAGAAGTCATC+TGG - chr7_4:63327957-63327976 Msa1170180:five_prime_UTR 45.0%
TATCCACCTCCTCTTGGTTA+TGG - chr7_4:63328017-63328036 Msa1170180:five_prime_UTR 45.0%
ATACCATAACCAAGAGGAGG+TGG + chr7_4:63328023-63328042 None:intergenic 45.0%
ACCTCCTCTTGGTTATGGTA+TGG - chr7_4:63328022-63328041 Msa1170180:five_prime_UTR 45.0%
ACCATACCATAACCAAGAGG+AGG + chr7_4:63328026-63328045 None:intergenic 45.0%
CCAACCATACCATAACCAAG+AGG + chr7_4:63328029-63328048 None:intergenic 45.0%
CCTCTTGGTTATGGTATGGT+TGG - chr7_4:63328026-63328045 Msa1170180:five_prime_UTR 45.0%
CTTGGTTATGGTATGGTTGG+AGG - chr7_4:63328029-63328048 Msa1170180:five_prime_UTR 45.0%
!! TGGAAGCATCTTCTTAGCCT+AGG + chr7_4:63328175-63328194 None:intergenic 45.0%
GATGCTTCCAATCAGTACAC+TGG - chr7_4:63328185-63328204 Msa1170180:intron 45.0%
CTCTTTCAGCCTATGATGAG+GGG + chr7_4:63328385-63328404 None:intergenic 45.0%
CCTCTTTCAGCCTATGATGA+GGG + chr7_4:63328386-63328405 None:intergenic 45.0%
ACCTCTTTCAGCCTATGATG+AGG + chr7_4:63328387-63328406 None:intergenic 45.0%
AATGTGCAGCCACTGATGTA+TGG - chr7_4:63328629-63328648 Msa1170180:intron 45.0%
GGAGCATGTTGTTGAAAACC+TGG + chr7_4:63328872-63328891 None:intergenic 45.0%
!!! TTAATTTTCGGCTTTGGGGG+AGG + chr7_4:63329025-63329044 None:intergenic 45.0%
GGTAAAAAATGCAAGGCAGC+AGG + chr7_4:63329129-63329148 None:intergenic 45.0%
! AGTGCTCTAAGCCTACAGAT+GGG + chr7_4:63329205-63329224 None:intergenic 45.0%
!!! TACTTGGTGCCAATTTTGGC+AGG - chr7_4:63329342-63329361 Msa1170180:five_prime_UTR 45.0%
!!! AAATTTTAAATTTAAATCTT+TGG + chr7_4:63325907-63325926 None:intergenic 5.0%
! TTACGTTGGGCCTTATGGGT+CGG + chr7_4:63323059-63323078 None:intergenic 50.0%
! GGGTTTTACGTTGGGCCTTA+TGG + chr7_4:63323064-63323083 None:intergenic 50.0%
! CGCGTGCTTTGTTCTTAAGG+TGG + chr7_4:63323123-63323142 None:intergenic 50.0%
! TGGCGCGTGCTTTGTTCTTA+AGG + chr7_4:63323126-63323145 None:intergenic 50.0%
GCGCCAACGATTACGAGTTT+AGG - chr7_4:63323140-63323159 Msa1170180:three_prime_UTR 50.0%
CAACTCGCAAACACACCCTA+AGG + chr7_4:63323865-63323884 None:intergenic 50.0%
CTTAGGGTGTGTTTGCGAGT+TGG - chr7_4:63323863-63323882 Msa1170180:intron 50.0%
! TTTGGAGGGGACGACTTTTG+AGG - chr7_4:63323888-63323907 Msa1170180:intron 50.0%
! TTGGAGGGGACGACTTTTGA+GGG - chr7_4:63323889-63323908 Msa1170180:intron 50.0%
ACTCCTTGGTCCATACCTCA+TGG - chr7_4:63324461-63324480 Msa1170180:CDS 50.0%
GTTCCATGAGGTATGGACCA+AGG + chr7_4:63324467-63324486 None:intergenic 50.0%
AGGTGGAAACAATGGCCAGA+TGG + chr7_4:63324520-63324539 None:intergenic 50.0%
AGCTTGCAGGGCAACTATGA+AGG + chr7_4:63324592-63324611 None:intergenic 50.0%
CCCTGGTGACTCTGAATTTC+GGG + chr7_4:63324666-63324685 None:intergenic 50.0%
CCCGAAATTCAGAGTCACCA+GGG - chr7_4:63324663-63324682 Msa1170180:CDS 50.0%
CCCCTGGTGACTCTGAATTT+CGG + chr7_4:63324667-63324686 None:intergenic 50.0%
CCGAAATTCAGAGTCACCAG+GGG - chr7_4:63324664-63324683 Msa1170180:CDS 50.0%
CGAAATTCAGAGTCACCAGG+GGG - chr7_4:63324665-63324684 Msa1170180:CDS 50.0%
ACCTGCTCACCAGAATCTGT+GGG + chr7_4:63324710-63324729 None:intergenic 50.0%
TACCTGCTCACCAGAATCTG+TGG + chr7_4:63324711-63324730 None:intergenic 50.0%
GGTGAGCAGGTAGATCTTGA+TGG - chr7_4:63324719-63324738 Msa1170180:CDS 50.0%
AGTAGAGGTGGAGGAAGAAG+TGG - chr7_4:63324790-63324809 Msa1170180:intron 50.0%
TAGACCTCTGAACCATGAGG+TGG + chr7_4:63324914-63324933 None:intergenic 50.0%
GGTTCAGAGGTCTACATTGG+GGG - chr7_4:63324920-63324939 Msa1170180:intron 50.0%
TCACTCCTTTCTGCGTTTCC+AGG - chr7_4:63325362-63325381 Msa1170180:intron 50.0%
CACTCCTTTCTGCGTTTCCA+GGG - chr7_4:63325363-63325382 Msa1170180:intron 50.0%
TCTTCCCTGGAAACGCAGAA+AGG + chr7_4:63325370-63325389 None:intergenic 50.0%
GTTCCACCGAAATGACTCCA+GGG + chr7_4:63325497-63325516 None:intergenic 50.0%
AGTTCCACCGAAATGACTCC+AGG + chr7_4:63325498-63325517 None:intergenic 50.0%
CGATTACGGCTAGAACTCTG+TGG + chr7_4:63325712-63325731 None:intergenic 50.0%
! CAGAGTTCTAGCCGTAATCG+GGG - chr7_4:63325712-63325731 Msa1170180:intron 50.0%
AGGGGTGGGGTGAAGTAAAA+TGG + chr7_4:63326085-63326104 None:intergenic 50.0%
GGAGGAAGCCATAAACGCAA+GGG + chr7_4:63326447-63326466 None:intergenic 50.0%
TGGAGGAAGCCATAAACGCA+AGG + chr7_4:63326448-63326467 None:intergenic 50.0%
! AAAATGCTGAGTTGAGGGGG+GGG - chr7_4:63326649-63326668 Msa1170180:CDS 50.0%
CTGTGTATGTCGGTAGAGAG+AGG + chr7_4:63327036-63327055 None:intergenic 50.0%
!! GATTGGAGGTGTCCTCTTAC+TGG - chr7_4:63327325-63327344 Msa1170180:intron 50.0%
AGGTGTCCTCTTACTGGATC+AGG - chr7_4:63327331-63327350 Msa1170180:intron 50.0%
CTGTACTAAGCACCAGGTCA+CGG + chr7_4:63327604-63327623 None:intergenic 50.0%
! CTTGTCCAGCTTTAGCAGGA+GGG + chr7_4:63327725-63327744 None:intergenic 50.0%
! TCTTGTCCAGCTTTAGCAGG+AGG + chr7_4:63327726-63327745 None:intergenic 50.0%
GGTTATGGTATGGTTGGAGG+TGG - chr7_4:63328032-63328051 Msa1170180:five_prime_UTR 50.0%
GGTATGGTTGGAGGTGGATA+TGG - chr7_4:63328038-63328057 Msa1170180:five_prime_UTR 50.0%
AAAAATGAGGGTTGGGGCCT+AGG - chr7_4:63328155-63328174 Msa1170180:intron 50.0%
ATGTTCCCTCCCCTCATCAT+AGG - chr7_4:63328373-63328392 Msa1170180:intron 50.0%
TTCAGCCTATGATGAGGGGA+GGG + chr7_4:63328381-63328400 None:intergenic 50.0%
TTTCAGCCTATGATGAGGGG+AGG + chr7_4:63328382-63328401 None:intergenic 50.0%
CCCTCATCATAGGCTGAAAG+AGG - chr7_4:63328383-63328402 Msa1170180:intron 50.0%
AGCGAGAGAGCAAGAGAGAT+AGG + chr7_4:63328594-63328613 None:intergenic 50.0%
CTTGCTCTCTCGCTGATAAG+AGG - chr7_4:63328600-63328619 Msa1170180:intron 50.0%
ATGCTCCATCACCAGTATCC+CGG - chr7_4:63328885-63328904 Msa1170180:intron 50.0%
! AGTAGTGGTGTCAGCTCAAG+TGG - chr7_4:63328917-63328936 Msa1170180:intron 50.0%
ATCGGCCATGACCACGATTA+CGG + chr7_4:63328967-63328986 None:intergenic 50.0%
! CAGTGCTCTAAGCCTACAGA+TGG + chr7_4:63329206-63329225 None:intergenic 50.0%
CATCTGTAGGCTTAGAGCAC+TGG - chr7_4:63329204-63329223 Msa1170180:five_prime_UTR 50.0%
! TACGTTGGGCCTTATGGGTC+GGG + chr7_4:63323058-63323077 None:intergenic 55.0%
GGCCCAACGTAAAACCCATC+TGG - chr7_4:63323067-63323086 Msa1170180:three_prime_UTR 55.0%
TCGGCGGTGTATGTCCAGAT+GGG + chr7_4:63323084-63323103 None:intergenic 55.0%
CACAGAGGAAGAGAGGGGAA+AGG + chr7_4:63324251-63324270 None:intergenic 55.0%
GCCCGAAATTCAGAGTCACC+AGG - chr7_4:63324662-63324681 Msa1170180:CDS 55.0%
TCAGGTTCACTGTTTCCCCC+TGG + chr7_4:63324683-63324702 None:intergenic 55.0%
ACCCACAGATTCTGGTGAGC+AGG - chr7_4:63324706-63324725 Msa1170180:CDS 55.0%
GGTGGAGGAAGAAGTGGAAG+AGG - chr7_4:63324796-63324815 Msa1170180:intron 55.0%
CTTCTTGCGCTTCCACCTCA+TGG - chr7_4:63324899-63324918 Msa1170180:intron 55.0%
GCTTCCACCTCATGGTTCAG+AGG - chr7_4:63324907-63324926 Msa1170180:intron 55.0%
ATCTGTGGGAGAAGTGGCAG+AGG - chr7_4:63324988-63325007 Msa1170180:intron 55.0%
AATGACTCCAGGGCCAACCT+TGG + chr7_4:63325487-63325506 None:intergenic 55.0%
! GGTTGGCCCTGGAGTCATTT+CGG - chr7_4:63325488-63325507 Msa1170180:intron 55.0%
CGTGACCTGGTGCTTAGTAC+AGG - chr7_4:63327602-63327621 Msa1170180:CDS 55.0%
!! GGAGGTGGATATGGTGCTGT+TGG - chr7_4:63328047-63328066 Msa1170180:five_prime_UTR 55.0%
!! GGATATGGTGCTGTTGGTGC+AGG - chr7_4:63328053-63328072 Msa1170180:five_prime_UTR 55.0%
!! GGTGCTGTTGGTGCAGGATA+TGG - chr7_4:63328059-63328078 Msa1170180:five_prime_UTR 55.0%
GCAGCCACTGATGTATGGTC+CGG - chr7_4:63328634-63328653 Msa1170180:intron 55.0%
CAGCCACTGATGTATGGTCC+GGG - chr7_4:63328635-63328654 Msa1170180:intron 55.0%
GGCATCATTGTCATGCCAGC+AGG + chr7_4:63328668-63328687 None:intergenic 55.0%
TGTGACTGTAGGCAACAGCC+AGG - chr7_4:63328851-63328870 Msa1170180:intron 55.0%
ACCACTACTCCTACCATGCC+GGG + chr7_4:63328906-63328925 None:intergenic 55.0%
CACCACTACTCCTACCATGC+CGG + chr7_4:63328907-63328926 None:intergenic 55.0%
! CTTTGGGGGAGGTAACCAGT+AGG + chr7_4:63329014-63329033 None:intergenic 55.0%
!! AGAGCACTGGCGATGACTCA+CGG - chr7_4:63329217-63329236 Msa1170180:five_prime_UTR 55.0%
CTCGGCGGTGTATGTCCAGA+TGG + chr7_4:63323085-63323104 None:intergenic 60.0%
! GTTGTTGCCAAGGTTGGCCC+TGG - chr7_4:63325477-63325496 Msa1170180:intron 60.0%
TGGCCCTGGAGTCATTTCGG+TGG - chr7_4:63325491-63325510 Msa1170180:intron 60.0%
GCTCTCCCTCCTGCTAAAGC+TGG - chr7_4:63327717-63327736 Msa1170180:CDS 60.0%
CCAAGAGGAGGTGGATACGC+AGG + chr7_4:63328014-63328033 None:intergenic 60.0%
CCTGCGTATCCACCTCCTCT+TGG - chr7_4:63328011-63328030 Msa1170180:five_prime_UTR 60.0%
!! GGTGCAGGATATGGTGCTGC+TGG - chr7_4:63328068-63328087 Msa1170180:five_prime_UTR 60.0%
!! TGGTGCTGCTGGCTTTGCAC+CGG - chr7_4:63328079-63328098 Msa1170180:intron 60.0%
GCTCCCGGACCATACATCAG+TGG + chr7_4:63328641-63328660 None:intergenic 60.0%
ATGCCAGCAGGAGTTGCTCC+CGG + chr7_4:63328656-63328675 None:intergenic 60.0%
CCATGCCGGGATACTGGTGA+TGG + chr7_4:63328893-63328912 None:intergenic 60.0%
CCATCACCAGTATCCCGGCA+TGG - chr7_4:63328890-63328909 Msa1170180:intron 60.0%
CACCAGTATCCCGGCATGGT+AGG - chr7_4:63328894-63328913 Msa1170180:intron 60.0%
CTCCTACCATGCCGGGATAC+TGG + chr7_4:63328899-63328918 None:intergenic 60.0%
TCCCGGCATGGTAGGAGTAG+TGG - chr7_4:63328902-63328921 Msa1170180:intron 60.0%
AAAGGCCCGCCCGACCCATA+AGG - chr7_4:63323046-63323065 Msa1170180:three_prime_UTR 65.0%
! TTGGGCCTTATGGGTCGGGC+GGG + chr7_4:63323054-63323073 None:intergenic 65.0%
! GTTGGGCCTTATGGGTCGGG+CGG + chr7_4:63323055-63323074 None:intergenic 65.0%
TAGTGAGCTGGGCTGACCCG+AGG - chr7_4:63325830-63325849 Msa1170180:intron 65.0%
! TGCTGAGTTGAGGGGGGGGT+CGG - chr7_4:63326653-63326672 Msa1170180:CDS 65.0%
GGTCCGGGAGCAACTCCTGC+TGG - chr7_4:63328650-63328669 Msa1170180:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 63322989 63329397 63322989 ID=Msa1170180;Name=Msa1170180
chr7_4 mRNA 63322989 63329397 63322989 ID=Msa1170180-mRNA-1;Parent=Msa1170180;Name=Msa1170180-mRNA-1;_AED=0.12;_eAED=0.12;_QI=580|0.75|0.77|1|0.87|0.77|9|397|479
chr7_4 exon 63322989 63323524 63322989 ID=Msa1170180-mRNA-1:exon:20239;Parent=Msa1170180-mRNA-1
chr7_4 exon 63323663 63323748 63323663 ID=Msa1170180-mRNA-1:exon:20238;Parent=Msa1170180-mRNA-1
chr7_4 exon 63324286 63324497 63324286 ID=Msa1170180-mRNA-1:exon:20237;Parent=Msa1170180-mRNA-1
chr7_4 exon 63324555 63324762 63324555 ID=Msa1170180-mRNA-1:exon:20236;Parent=Msa1170180-mRNA-1
chr7_4 exon 63326507 63326680 63326507 ID=Msa1170180-mRNA-1:exon:20235;Parent=Msa1170180-mRNA-1
chr7_4 exon 63326862 63327002 63326862 ID=Msa1170180-mRNA-1:exon:20234;Parent=Msa1170180-mRNA-1
chr7_4 exon 63327196 63327297 63327196 ID=Msa1170180-mRNA-1:exon:20233;Parent=Msa1170180-mRNA-1
chr7_4 exon 63327377 63328092 63327377 ID=Msa1170180-mRNA-1:exon:20232;Parent=Msa1170180-mRNA-1
chr7_4 exon 63329156 63329397 63329156 ID=Msa1170180-mRNA-1:exon:20231;Parent=Msa1170180-mRNA-1
chr7_4 five_prime_UTR 63329156 63329397 63329156 ID=Msa1170180-mRNA-1:five_prime_utr;Parent=Msa1170180-mRNA-1
chr7_4 five_prime_UTR 63327755 63328092 63327755 ID=Msa1170180-mRNA-1:five_prime_utr;Parent=Msa1170180-mRNA-1
chr7_4 CDS 63327377 63327754 63327377 ID=Msa1170180-mRNA-1:cds;Parent=Msa1170180-mRNA-1
chr7_4 CDS 63327196 63327297 63327196 ID=Msa1170180-mRNA-1:cds;Parent=Msa1170180-mRNA-1
chr7_4 CDS 63326862 63327002 63326862 ID=Msa1170180-mRNA-1:cds;Parent=Msa1170180-mRNA-1
chr7_4 CDS 63326507 63326680 63326507 ID=Msa1170180-mRNA-1:cds;Parent=Msa1170180-mRNA-1
chr7_4 CDS 63324555 63324762 63324555 ID=Msa1170180-mRNA-1:cds;Parent=Msa1170180-mRNA-1
chr7_4 CDS 63324286 63324497 63324286 ID=Msa1170180-mRNA-1:cds;Parent=Msa1170180-mRNA-1
chr7_4 CDS 63323663 63323748 63323663 ID=Msa1170180-mRNA-1:cds;Parent=Msa1170180-mRNA-1
chr7_4 CDS 63323386 63323524 63323386 ID=Msa1170180-mRNA-1:cds;Parent=Msa1170180-mRNA-1
chr7_4 three_prime_UTR 63322989 63323385 63322989 ID=Msa1170180-mRNA-1:three_prime_utr;Parent=Msa1170180-mRNA-1
Gene Sequence

>Msa1170180

ATGCCTGGGACAAGACAAAAAGATGCAACTGCCCGAAATTCAGAGTCACCAGGGGGAAACAGTGAACCTGAAAAACCCACAGATTCTGGTGAGCAGGTAGATCTTGATGGGGACAATGATCAAGAGGAATCAAGCGAGGAAGAAGTTGAGTATGAAGAAGTAGAGGTGGAGGAAGAAGTGGAAGAGGAAGAAGAAGAGGAAGAAGTAGAGGAAGAGAGTAAGCCCTTAGATGAAGAAGATGAGGCTGACAAAAAGAAACACGCTGAGCTTCTTGCGCTTCCACCTCATGGTTCAGAGGTCTACATTGGGGGAATTCCTCACGAAACTTCTGAAAAAGATTTAAGGGTCTTTTGTCAATCTGTGGGAGAAGTGGCAGAGGGTTATGAAGGGAAAGAAGCCAAAGGTTATGCTTTTGTGACCTTCAAGACAAAGGAATTAGCATCTAAGGCTCTCGAGGAGTTGAACAACTCTGAATTCAAGGGAAGAAAAATAAAGTGCTCACCATCTCAAGTTAAGCATCGGTTATTCATTGGTAATGTTCCTAAAGAGTGGACTGTAGAAGATATGAAGAAGGTTGTTGCCAAGGTTGGCCCTGGAGTCATTTCGGTGGAACTGTTGAAGGATCCACAGAGTTCTAGCCGTAATCGGGGATTTGCTTTTATTGAGTATCACAATCATGCTTGTGCAGAATATTCAAGGCAGAAGATGTCAAACTCAAACTTTAAACTTGACAATAACGATGCAATAGTGAGCTGGGCTGACCCGAGGAATTCTGAATCATCATCATCCTCTCAGGTGAAAGCAGTATATGTAAAGAACCTTCCAGAAAACATAACTCAGAATCGTCTTAAAGAGCTGTTTGAACATCATGGAAAGATCACAAAAGTGGCTCTCCCTCCTGCTAAAGCTGGACAAGAAAAGAGCAGATATGGTTTTGTTCACTTTGCTGATAGGTCAAGTGCAATGAAGGCATTGAAGAATACGGAGAAGTATGAAATTGATGCGAACTGTAACCATCAAGTTTTCTGGAATGGACCAGGTCAAACTTTGGAATGCTCACTTGCTAAGCCACAAGCAGATCAGAAGTCATCTGGTGCATCAAATTCATTCAACTCTGCTGTACTTCCTGCGTATCCACCTCCTCTTGGTTATGGTATGGTTGGAGGTGGATATGGTGCTGTTGGTGCAGGATATGGTGCTGCTGGCTTTGCACCGCCACTGATGTATGGTCCGGGAGCAACTCCTGCTGGCATGACAATGATGCCAATGCTTTTACCAGATGGAAGGATTGCATATGTATTGCAACAGCCAGGTTTTCAACAACATGCTCCATCACCAGTATCCCGGCATGGTAGGAGTAGTGGTGTCAGCTCAAGTGGTGAAAAACGCAGTAACGATAATAACCGTAATCGTGGTCATGGCCGATATAATCCTTACTAA
Protein sequence

>Msa1170180

MPGTRQKDATARNSESPGGNSEPEKPTDSGEQVDLDGDNDQEESSEEEVEYEEVEVEEEVEEEEEEEEVEEESKPLDEEDEADKKKHAELLALPPHGSEVYIGGIPHETSEKDLRVFCQSVGEVAEGYEGKEAKGYAFVTFKTKELASKALEELNNSEFKGRKIKCSPSQVKHRLFIGNVPKEWTVEDMKKVVAKVGPGVISVELLKDPQSSSRNRGFAFIEYHNHACAEYSRQKMSNSNFKLDNNDAIVSWADPRNSESSSSSQVKAVYVKNLPENITQNRLKELFEHHGKITKVALPPAKAGQEKSRYGFVHFADRSSAMKALKNTEKYEIDANCNHQVFWNGPGQTLECSLAKPQADQKSSGASNSFNSAVLPAYPPPLGYGMVGGGYGAVGAGYGAAGFAPPLMYGPGATPAGMTMMPMLLPDGRIAYVLQQPGFQQHAPSPVSRHGRSSGVSSSGEKRSNDNNRNRGHGRYNPY*