AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1084440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1084440 MtrunA17_Chr7g0266451 97.275 477 5 2 1 469 1 477 0.0 943
Msa1084440 MtrunA17_Chr4g0026301 69.492 354 104 2 80 430 92 444 0.0 530
Msa1084440 MtrunA17_Chr7g0217261 62.912 364 129 3 76 436 329 689 7.00e-164 479
Msa1084440 MtrunA17_Chr7g0276201 52.696 408 177 7 43 436 44 449 1.48e-140 412
Msa1084440 MtrunA17_Chr8g0372111 32.806 253 163 4 99 344 419 671 1.26e-36 144
Msa1084440 MtrunA17_Chr8g0335981 30.333 300 177 9 59 347 196 474 4.70e-32 130
Msa1084440 MtrunA17_Chr7g0250221 29.496 278 174 8 62 326 162 430 7.45e-24 105
Msa1084440 MtrunA17_Chr4g0074711 22.881 354 214 11 92 407 63 395 2.68e-19 89.7
Msa1084440 MtrunA17_Chr3g0134141 24.786 234 155 8 98 317 24 250 2.14e-15 78.6
Msa1084440 MtrunA17_Chr1g0153181 25.296 253 168 8 98 336 32 277 5.30e-15 77.4
Msa1084440 MtrunA17_Chr4g0044541 24.803 254 168 9 98 336 34 279 6.49e-15 77.4
Msa1084440 MtrunA17_Chr4g0044541 24.860 358 219 10 100 413 124 475 1.23e-14 76.3
Msa1084440 MtrunA17_Chr2g0288251 21.404 285 186 8 100 353 62 339 8.10e-15 76.3
Msa1084440 MtrunA17_Chr1g0153871 23.101 316 193 9 100 375 99 404 3.25e-14 74.3
Msa1084440 MtrunA17_Chr7g0265341 22.772 404 238 14 100 464 160 528 3.11e-13 72.0
Msa1084440 MtrunA17_Chr0c09g0493511 22.520 373 225 13 98 428 31 381 4.64e-13 71.2
Msa1084440 MtrunA17_Chr6g0466501 24.354 271 179 9 98 353 25 284 6.83e-13 70.9
Msa1084440 MtrunA17_Chr6g0466501 22.911 371 226 12 98 428 113 463 2.36e-12 69.3
Msa1084440 MtrunA17_Chr6g0465751 24.354 271 179 9 98 353 25 284 8.34e-13 70.5
Msa1084440 MtrunA17_Chr6g0465691 22.911 371 226 12 98 428 31 381 1.28e-12 69.7
Msa1084440 MtrunA17_Chr3g0133651 21.831 284 182 6 100 352 95 369 2.18e-12 68.6
Msa1084440 MtrunA17_Chr3g0120721 23.288 219 159 5 176 393 19 229 1.24e-11 65.9
Msa1084440 MtrunA17_Chr6g0449481 23.121 173 127 3 176 348 46 212 6.15e-11 63.9
Msa1084440 MtrunA17_Chr3g0087481 29.412 153 84 5 95 225 57 207 8.89e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1084440 AT3G52660.3 56.034 464 188 6 21 469 9 471 1.55e-159 460
Msa1084440 AT3G52660.1 56.034 464 188 6 21 469 9 471 1.55e-159 460
Msa1084440 AT3G52660.2 56.034 464 188 6 21 469 9 471 1.55e-159 460
Msa1084440 AT4G00830.2 51.981 429 190 8 55 469 69 495 9.26e-157 454
Msa1084440 AT4G00830.1 51.981 429 190 8 55 469 69 495 9.26e-157 454
Msa1084440 AT4G00830.6 51.981 429 190 8 55 469 69 495 9.26e-157 454
Msa1084440 AT4G00830.3 51.049 429 186 9 55 469 69 487 1.81e-150 437
Msa1084440 AT4G00830.5 51.049 429 186 9 55 469 69 487 1.81e-150 437
Msa1084440 AT4G00830.4 50.583 429 196 8 55 469 69 495 3.69e-150 437
Msa1084440 AT5G28390.1 44.017 234 75 3 238 469 1 180 2.08e-52 175
Msa1084440 AT2G44710.4 28.339 307 190 8 52 347 101 388 5.44e-28 118
Msa1084440 AT2G44710.2 28.339 307 190 8 52 347 186 473 7.91e-28 117
Msa1084440 AT2G44710.1 28.339 307 190 8 52 347 186 473 7.91e-28 117
Msa1084440 AT4G34110.1 26.459 257 160 9 98 336 36 281 1.77e-17 85.9
Msa1084440 AT4G34110.1 24.033 362 219 12 100 414 126 478 1.32e-13 73.6
Msa1084440 AT1G71770.1 25.651 269 178 7 98 351 59 320 1.14e-16 83.2
Msa1084440 AT1G71770.1 22.678 366 228 13 100 415 148 508 2.56e-12 69.7
Msa1084440 AT1G71770.2 25.651 269 178 7 98 351 59 320 1.14e-16 83.2
Msa1084440 AT1G71770.2 22.678 366 228 13 100 415 148 508 2.56e-12 69.7
Msa1084440 AT2G23350.1 24.346 382 233 15 100 445 136 497 1.67e-16 82.8
Msa1084440 AT2G23350.1 25.794 252 162 9 100 334 48 291 5.47e-15 77.8
Msa1084440 AT1G49760.1 27.049 244 157 9 98 327 45 281 1.73e-16 82.8
Msa1084440 AT1G49760.1 23.797 374 207 15 100 434 135 469 1.89e-13 73.2
Msa1084440 AT1G49760.2 27.049 244 157 9 98 327 45 281 1.73e-16 82.8
Msa1084440 AT1G49760.2 23.797 374 207 15 100 434 135 469 1.89e-13 73.2
Msa1084440 AT1G22760.1 25.260 289 170 11 100 353 138 415 7.93e-13 71.2
Msa1084440 AT1G22760.1 21.933 269 188 7 98 351 49 310 4.84e-12 68.6
Msa1084440 AT2G36660.1 21.184 321 210 8 100 381 114 430 2.17e-12 69.7
Msa1084440 AT1G49600.1 21.523 302 188 6 100 361 121 413 1.15e-11 67.0

Find 183 sgRNAs with CRISPR-Local

Find 470 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCTTCTTTGTATGCTTC+TGG 0.169584 7_2:-84812325 Msa1084440:five_prime_UTR
CCCTGGTGACTCTGAATTTC+GGG 0.172010 7_2:+84812217 None:intergenic
CCGAGTTTCCCAGAAAATTT+TGG 0.176146 7_2:+84812572 None:intergenic
CCCCTGGTGACTCTGAATTT+CGG 0.182553 7_2:+84812216 None:intergenic
ATTCTACTTGGTGCCAATTT+TGG 0.211528 7_2:-84807535 Msa1084440:three_prime_UTR
GACAAAGGAATTAGCATCTA+AGG 0.262798 7_2:-84811743 Msa1084440:CDS
AGCCTCATCTTCTTCATCTA+AGG 0.282163 7_2:+84812025 None:intergenic
TGCTAATTCCTTTGTCTTGA+AGG 0.283256 7_2:+84811750 None:intergenic
AATAAATTGCTTCCCATCAT+AGG 0.285536 7_2:+84807714 None:intergenic
TCTTCTACAGTCCACTCTTT+AGG 0.290635 7_2:+84811435 None:intergenic
TGGCGCGTGCTTTGTTCTTA+AGG 0.291925 7_2:+84813784 None:intergenic
CTCAACTAGTTCAAACAAAT+AGG 0.293611 7_2:-84807631 Msa1084440:three_prime_UTR
TTAAACTAGCCTGCCAAAAT+TGG 0.297730 7_2:+84807522 None:intergenic
CGCCAACGATTACGAGTTTA+GGG 0.305185 7_2:-84813766 Msa1084440:five_prime_UTR
GCGCCAACGATTACGAGTTT+AGG 0.311976 7_2:-84813767 Msa1084440:five_prime_UTR
GGTATGGTTGGAGGTGGATA+TGG 0.314554 7_2:-84808836 Msa1084440:CDS
TAGTTATACCACAATTTAAC+TGG 0.334444 7_2:-84812595 Msa1084440:five_prime_UTR
ATCTAGAAAAGCAAGCTTGC+AGG 0.339804 7_2:+84812278 None:intergenic
CTCCTACCATGCCGGGATAC+TGG 0.355913 7_2:+84807977 None:intergenic
GGTGCTGTTGGTGCAGGATA+TGG 0.366546 7_2:-84808815 Msa1084440:CDS
ATCGGCCATGACCACGATTA+CGG 0.369175 7_2:+84807909 None:intergenic
CACAGAGTTCTAGCCGTAAT+CGG 0.371058 7_2:-84811169 Msa1084440:CDS
TATGAGAAAATTTGCAGAAC+AGG 0.371907 7_2:-84807817 Msa1084440:three_prime_UTR
TTCTAGATTCATAGAATGCC+TGG 0.372466 7_2:-84812263 Msa1084440:exon
CTTCGATTTCACTTCCAATC+AGG 0.389036 7_2:-84813698 Msa1084440:intron
TCAACTAGTTCAAACAAATA+GGG 0.391746 7_2:-84807630 Msa1084440:three_prime_UTR
GTTAAGCATCGGTTATTCAT+TGG 0.392291 7_2:-84811465 Msa1084440:CDS
GGTTGGCCCTGGAGTCATTT+CGG 0.392811 7_2:-84811391 Msa1084440:CDS
TACGTTGGGCCTTATGGGTC+GGG 0.396545 7_2:+84813852 None:intergenic
TTTGTTGCTATGCTACTCCT+TGG 0.399721 7_2:-84812439 Msa1084440:five_prime_UTR
TACATTAGTAAGGATTATAT+CGG 0.403248 7_2:+84807891 None:intergenic
TATCCACCTCCTCTTGGTTA+TGG 0.404216 7_2:-84808857 Msa1084440:CDS
CATTTCGGTGGAACTGTTGA+AGG 0.404786 7_2:-84811376 Msa1084440:intron
CTTCTTGCGCTTCCACCTCA+TGG 0.410083 7_2:-84811981 Msa1084440:CDS
GGTGGAGGAAGAAGTGGAAG+AGG 0.422190 7_2:-84812084 Msa1084440:CDS
TAGGAACAATTACATTAGTA+AGG 0.425175 7_2:+84807881 None:intergenic
TTACGTTGGGCCTTATGGGT+CGG 0.429968 7_2:+84813851 None:intergenic
GTTGAACAACTCTGAATTCA+AGG 0.433692 7_2:-84811710 Msa1084440:intron
CTTGGTTATGGTATGGTTGG+AGG 0.434215 7_2:-84808845 Msa1084440:CDS
GTATGAAGAAGTAGAGGTGG+AGG 0.436885 7_2:-84812099 Msa1084440:CDS
TGCATAGGTAAGGGTTATGA+AGG 0.438139 7_2:-84811803 Msa1084440:intron
GGACAAGAAAAGAGCAGATA+TGG 0.438969 7_2:-84809137 Msa1084440:CDS
TCTTACTCTGCTATTCCATC+TGG 0.438998 7_2:-84812384 Msa1084440:five_prime_UTR
GGTGAGCAGGTAGATCTTGA+TGG 0.439005 7_2:-84812161 Msa1084440:CDS
ACAGAGTTCTAGCCGTAATC+GGG 0.441429 7_2:-84811168 Msa1084440:CDS
CCTGCGTATCCACCTCCTCT+TGG 0.442592 7_2:-84808863 Msa1084440:CDS
ACCTCCTCTTGGTTATGGTA+TGG 0.445868 7_2:-84808852 Msa1084440:CDS
TAAAAGCAAATCCCCGATTA+CGG 0.448099 7_2:+84811156 None:intergenic
CTCGGCGGTGTATGTCCAGA+TGG 0.451609 7_2:+84813825 None:intergenic
AGAGGATAACAATGCTCAAA+AGG 0.456882 7_2:+84812504 None:intergenic
ACTAATGTAATTGTTCCTAC+TGG 0.458808 7_2:-84807877 Msa1084440:exon
CCTCTTGGTTATGGTATGGT+TGG 0.461631 7_2:-84808848 Msa1084440:CDS
GTTGTTGCCAAGGTTGGCCC+TGG 0.464947 7_2:-84811402 Msa1084440:CDS
AAAGAGCTGTTTGAACATCA+TGG 0.465220 7_2:-84809197 Msa1084440:CDS
GGAGGTGGATATGGTGCTGT+TGG 0.465667 7_2:-84808827 Msa1084440:CDS
ATGGTTCAGAGGTCTACATT+GGG 0.465780 7_2:-84811962 Msa1084440:CDS
GGTGCAGGATATGGTGCTGC+TGG 0.466144 7_2:-84808806 Msa1084440:CDS
AGTAGAGGTGGAGGAAGAAG+TGG 0.470019 7_2:-84812090 Msa1084440:CDS
AGTGGAAGAGGAAGAAGAAG+AGG 0.471511 7_2:-84812072 Msa1084440:CDS
CAAGCAGATCAGAAGTCATC+TGG 0.473781 7_2:-84808917 Msa1084440:CDS
ACGGAGAAGTATGAAATTGA+TGG 0.475658 7_2:-84809065 Msa1084440:intron
ATGCTTGTGCAGAATATTCA+AGG 0.479524 7_2:-84811118 Msa1084440:CDS
GGTCACAAAAGCATAACCTT+TGG 0.479540 7_2:+84811771 None:intergenic
GAATGGACCAGGTCAAACTT+TGG 0.480376 7_2:-84808960 Msa1084440:intron
TCCCATCATAGGAAAAGATA+AGG 0.481594 7_2:+84807725 None:intergenic
CATCTGTAGGCTTAGAGCAC+TGG 0.483180 7_2:-84807669 Msa1084440:three_prime_UTR
TGGACGAATTCACTATTTCT+CGG 0.483888 7_2:+84813807 None:intergenic
GGCCCAACGTAAAACCCATC+TGG 0.485879 7_2:-84813840 Msa1084440:five_prime_UTR
GCCTCATCTTCTTCATCTAA+GGG 0.486530 7_2:+84812026 None:intergenic
TGAATCATCATCATCCTCTC+AGG 0.490075 7_2:-84811021 Msa1084440:intron
ACCCACAGATTCTGGTGAGC+AGG 0.493614 7_2:-84812174 Msa1084440:CDS
GGTTATGGTATGGTTGGAGG+TGG 0.495269 7_2:-84808842 Msa1084440:CDS
AAGAAGGTTGTTGCCAAGGT+TGG 0.496072 7_2:-84811408 Msa1084440:CDS
GCAACAAAAGTAAGAAAGAC+AGG 0.496344 7_2:+84812454 None:intergenic
AAAGGCCCGCCCGACCCATA+AGG 0.498215 7_2:-84813861 Msa1084440:five_prime_UTR
GGCATCATTGTCATGCCAGC+AGG 0.499937 7_2:+84808208 None:intergenic
ACATATGCAATCCTTCCATC+TGG 0.499994 7_2:+84808175 None:intergenic
AAGAAGAGAGTTTGCAAATG+TGG 0.500154 7_2:+84812338 None:intergenic
GCTCTCCCTCCTGCTAAAGC+TGG 0.501443 7_2:-84809158 Msa1084440:CDS
CACCACTACTCCTACCATGC+CGG 0.502610 7_2:+84807969 None:intergenic
TGAGTATGAAGAAGTAGAGG+TGG 0.503776 7_2:-84812102 Msa1084440:CDS
GGTCCGGGAGCAACTCCTGC+TGG 0.509565 7_2:-84808223 Msa1084440:CDS
AGAAGAAGAGGAAGAAGTAG+AGG 0.510075 7_2:-84812060 Msa1084440:CDS
GAGTTGATGTTGATGTATAA+AGG 0.510191 7_2:-84813879 Msa1084440:five_prime_UTR
TCGGCGGTGTATGTCCAGAT+GGG 0.512621 7_2:+84813826 None:intergenic
ACCACTACTCCTACCATGCC+GGG 0.514963 7_2:+84807970 None:intergenic
TTTAAGTCTAAGATTCTACT+TGG 0.516185 7_2:-84807547 Msa1084440:three_prime_UTR
CGCGTGCTTTGTTCTTAAGG+TGG 0.517038 7_2:+84813787 None:intergenic
TTGGGCCTTATGGGTCGGGC+GGG 0.521978 7_2:+84813856 None:intergenic
GTGAGCAGGTAGATCTTGAT+GGG 0.522099 7_2:-84812160 Msa1084440:CDS
AGTTCCACCGAAATGACTCC+AGG 0.523128 7_2:+84811384 None:intergenic
TGATAGGTCAAGTGCAATGA+AGG 0.523880 7_2:-84809099 Msa1084440:CDS
CCCATCATAGGAAAAGATAA+GGG 0.524572 7_2:+84807726 None:intergenic
GGATATGGTGCTGTTGGTGC+AGG 0.526774 7_2:-84808821 Msa1084440:CDS
GGAAAACGGAAGTACCTGAT+TGG 0.528615 7_2:+84813684 None:intergenic
TGTGACTGTAGGCAACAGCC+AGG 0.530335 7_2:-84808022 Msa1084440:intron
CTTCCATCTGGTAAAAGCAT+TGG 0.530824 7_2:+84808187 None:intergenic
AGCTTGCAGGGCAACTATGA+AGG 0.533010 7_2:+84812291 None:intergenic
GATGATGATTCAGAATTCCT+CGG 0.535591 7_2:+84811032 None:intergenic
ATAACGATGCAATAGTGAGC+TGG 0.537030 7_2:-84811061 Msa1084440:CDS
TCTTGTCCAGCTTTAGCAGG+AGG 0.538943 7_2:+84809152 None:intergenic
AATGACTCCAGGGCCAACCT+TGG 0.541179 7_2:+84811395 None:intergenic
ATGATGATTCAGAATTCCTC+GGG 0.542091 7_2:+84811033 None:intergenic
TACCTGCTCACCAGAATCTG+TGG 0.544070 7_2:+84812172 None:intergenic
ATGCCAGCAGGAGTTGCTCC+CGG 0.544143 7_2:+84808220 None:intergenic
CATGGTTCAGAGGTCTACAT+TGG 0.544508 7_2:-84811963 Msa1084440:CDS
TATGAAGAAGGTTGTTGCCA+AGG 0.545814 7_2:-84811412 Msa1084440:CDS
CTTGTCCAGCTTTAGCAGGA+GGG 0.546775 7_2:+84809153 None:intergenic
TCTAGATTCATAGAATGCCT+GGG 0.547799 7_2:-84812262 Msa1084440:exon
GATGACTTCTGATCTGCTTG+TGG 0.549430 7_2:+84808920 None:intergenic
AGTTGAGTATGAAGAAGTAG+AGG 0.551022 7_2:-84812105 Msa1084440:CDS
AAAATTTGCAGAACAGGCAT+AGG 0.551199 7_2:-84807811 Msa1084440:three_prime_UTR
TTGTCAATCTGTGGGAGAAG+TGG 0.551925 7_2:-84811898 Msa1084440:CDS
ATGCTCCATCACCAGTATCC+CGG 0.551954 7_2:-84807988 Msa1084440:CDS
GACTGTAGAAGATATGAAGA+AGG 0.552294 7_2:-84811424 Msa1084440:CDS
AATGTGCAGCCACTGATGTA+TGG 0.552663 7_2:-84808244 Msa1084440:intron
GCATAGGTAAGGGTTATGAA+GGG 0.554101 7_2:-84811802 Msa1084440:intron
AATGAAGGCATTGAAGAATA+CGG 0.554131 7_2:-84809084 Msa1084440:CDS
TTGGTAATGTTCCTAAAGAG+TGG 0.554375 7_2:-84811446 Msa1084440:CDS
AACCGATGCTTAACTTGAGA+TGG 0.558623 7_2:+84811474 None:intergenic
CCATGCCGGGATACTGGTGA+TGG 0.560019 7_2:+84807983 None:intergenic
CAGTGCTCTAAGCCTACAGA+TGG 0.560481 7_2:+84807670 None:intergenic
AGTAGTGGTGTCAGCTCAAG+TGG 0.560864 7_2:-84807956 Msa1084440:CDS
AATAACCGTAATCGTGGTCA+TGG 0.562058 7_2:-84807914 Msa1084440:CDS
TGGTGCTGCTGGCTTTGCAC+CGG 0.565428 7_2:-84808795 Msa1084440:intron
TCTAGAAAAGCAAGCTTGCA+GGG 0.565994 7_2:+84812279 None:intergenic
ACTCCTTGGTCCATACCTCA+TGG 0.567908 7_2:-84812425 Msa1084440:five_prime_UTR
TAACGATGCAATAGTGAGCT+GGG 0.568267 7_2:-84811060 Msa1084440:CDS
TGAAACTGTTCCATGAGGTA+TGG 0.570420 7_2:+84812415 None:intergenic
CACCATCTCAAGTTAAGCAT+CGG 0.570455 7_2:-84811476 Msa1084440:CDS
GCAGCCACTGATGTATGGTC+CGG 0.571930 7_2:-84808239 Msa1084440:intron
TCATGGAAAGATCACAAAAG+TGG 0.575285 7_2:-84809180 Msa1084440:CDS
GCCCGAAATTCAGAGTCACC+AGG 0.578656 7_2:-84812218 Msa1084440:CDS
CATAGGTAAGGGTTATGAAG+GGG 0.579849 7_2:-84811801 Msa1084440:intron
AGTTTGCAAATGTGGAAAGG+TGG 0.581122 7_2:+84812346 None:intergenic
AACCCTAAACTCGTAATCGT+TGG 0.581482 7_2:+84813764 None:intergenic
ATACCATAACCAAGAGGAGG+TGG 0.583928 7_2:+84808854 None:intergenic
ATCTGTGGGAGAAGTGGCAG+AGG 0.585652 7_2:-84811892 Msa1084440:intron
CCAAGAGGAGGTGGATACGC+AGG 0.593051 7_2:+84808863 None:intergenic
TCCCGGCATGGTAGGAGTAG+TGG 0.593910 7_2:-84807971 Msa1084440:CDS
AAACAATATGAGTGGCCAGA+TGG 0.594478 7_2:+84812369 None:intergenic
CAGCCACTGATGTATGGTCC+GGG 0.596285 7_2:-84808238 Msa1084440:CDS
GCCCTTAGATGAAGAAGATG+AGG 0.598683 7_2:-84812027 Msa1084440:CDS
GAGAGTTTGCAAATGTGGAA+AGG 0.598965 7_2:+84812343 None:intergenic
CAACTAGTTCAAACAAATAG+GGG 0.600096 7_2:-84807629 Msa1084440:three_prime_UTR
GTTGGGCCTTATGGGTCGGG+CGG 0.600341 7_2:+84813855 None:intergenic
TGATGGGGACAATGATCAAG+AGG 0.603621 7_2:-84812144 Msa1084440:CDS
AGAGCACTGGCGATGACTCA+CGG 0.605652 7_2:-84807656 Msa1084440:three_prime_UTR
GCTTCCACCTCATGGTTCAG+AGG 0.610025 7_2:-84811973 Msa1084440:CDS
CACCAGTATCCCGGCATGGT+AGG 0.611902 7_2:-84807979 Msa1084440:CDS
GGAGCATGTTGTTGAAAACC+TGG 0.612025 7_2:+84808004 None:intergenic
ACCTGCTCACCAGAATCTGT+GGG 0.613571 7_2:+84812173 None:intergenic
ATAATCTTACTCCCATCTGT+AGG 0.614931 7_2:-84807682 Msa1084440:three_prime_UTR
CCGAAATTCAGAGTCACCAG+GGG 0.615182 7_2:-84812216 Msa1084440:CDS
TAGTGAGCTGGGCTGACCCG+AGG 0.618827 7_2:-84811049 Msa1084440:CDS
CCCGAAATTCAGAGTCACCA+GGG 0.620516 7_2:-84812217 Msa1084440:CDS
AACGATAATAACCGTAATCG+TGG 0.621986 7_2:-84807920 Msa1084440:CDS
TGGCCCTGGAGTCATTTCGG+TGG 0.622046 7_2:-84811388 Msa1084440:CDS
ATTAGCATCTAAGGCTCTCG+AGG 0.629832 7_2:-84811734 Msa1084440:CDS
TGGAAGTGAAATCGAAGTCG+AGG 0.637979 7_2:+84813704 None:intergenic
CCATCACCAGTATCCCGGCA+TGG 0.641754 7_2:-84807983 Msa1084440:CDS
TTGATTGAAACTGTTCCATG+AGG 0.645308 7_2:+84812410 None:intergenic
TGGTTCAGAGGTCTACATTG+GGG 0.645914 7_2:-84811961 Msa1084440:CDS
CAGAGTTCTAGCCGTAATCG+GGG 0.647049 7_2:-84811167 Msa1084440:CDS
CAAAGCCGAAAATTAATCTG+TGG 0.647057 7_2:-84807844 Msa1084440:three_prime_UTR
TAGAAGCTCTACAACTACAA+TGG 0.656732 7_2:+84813727 None:intergenic
CGATTACGGCTAGAACTCTG+TGG 0.668127 7_2:+84811170 None:intergenic
GTTCCACCGAAATGACTCCA+GGG 0.672546 7_2:+84811385 None:intergenic
TAGACCTCTGAACCATGAGG+TGG 0.673055 7_2:+84811969 None:intergenic
AGTGCTCTAAGCCTACAGAT+GGG 0.674526 7_2:+84807671 None:intergenic
GGTTCAGAGGTCTACATTGG+GGG 0.681072 7_2:-84811960 Msa1084440:CDS
ACCATACCATAACCAAGAGG+AGG 0.682760 7_2:+84808851 None:intergenic
AAAGGTGGAAACAATATGAG+TGG 0.683816 7_2:+84812361 None:intergenic
GTTCCATGAGGTATGGACCA+AGG 0.688815 7_2:+84812422 None:intergenic
TGATCAAGAGGAATCAAGCG+AGG 0.690783 7_2:-84812132 Msa1084440:CDS
GCTCCCGGACCATACATCAG+TGG 0.700475 7_2:+84808235 None:intergenic
ATGAAGGGGAAAGAAGCCAA+AGG 0.709242 7_2:-84811787 Msa1084440:CDS
CATGTAATAGGTCACCTGAG+AGG 0.716127 7_2:+84811007 None:intergenic
TGAGCAGGTAGATCTTGATG+GGG 0.733370 7_2:-84812159 Msa1084440:CDS
ATGTAGACCTCTGAACCATG+AGG 0.739451 7_2:+84811966 None:intergenic
CCAACCATACCATAACCAAG+AGG 0.748224 7_2:+84808848 None:intergenic
CGAAATTCAGAGTCACCAGG+GGG 0.748282 7_2:-84812215 Msa1084440:CDS
ACGAATTCACTATTTCTCGG+CGG 0.751684 7_2:+84813810 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTGGATAAACA+TGG - chr7_2:84807896-84807915 Msa1084440:CDS 15.0%
!! TGCAAAAAAAAAAAATGTTA+AGG + chr7_2:84808014-84808033 None:intergenic 15.0%
!!! AGATTTTTTTTTTTTTGTTG+TGG + chr7_2:84808106-84808125 None:intergenic 15.0%
!! AACATACATAATTACAATAA+AGG + chr7_2:84808705-84808724 None:intergenic 15.0%
!! ACATATAATAGAAAAATTGT+TGG + chr7_2:84810070-84810089 None:intergenic 15.0%
!! ATAGTTTAAGTAACAAAAAA+AGG + chr7_2:84810131-84810150 None:intergenic 15.0%
!!! AGAAGTAACTTTTTTTTTTA+TGG + chr7_2:84811226-84811245 None:intergenic 15.0%
!! GAATAAATTTAGAAACAAAT+TGG - chr7_2:84811721-84811740 Msa1084440:CDS 15.0%
!! AAAGAAATCAATAATTCATT+AGG + chr7_2:84812071-84812090 None:intergenic 15.0%
!!! AATTTTTATGTTTCTTCTAA+AGG + chr7_2:84812769-84812788 None:intergenic 15.0%
!! ATTCTATTGAATATCTTTAT+GGG - chr7_2:84813043-84813062 Msa1084440:intron 15.0%
!!! TTTTATTCTTGTAATTTGTA+AGG - chr7_2:84813826-84813845 Msa1084440:five_prime_UTR 15.0%
!!! ATAGCATAGCTTTTTTTTTT+TGG - chr7_2:84807886-84807905 Msa1084440:exon 20.0%
!!! AATCTAGAGATTTTCTTTAA+AGG - chr7_2:84808042-84808061 Msa1084440:intron 20.0%
!!! TTTTTTTTTCAAAAACAGAG+AGG + chr7_2:84808166-84808185 None:intergenic 20.0%
!!! TTATTTTGAAGTGTTTGTTT+AGG + chr7_2:84808205-84808224 None:intergenic 20.0%
!! AAAAATAAAGTAAGAACAAC+AGG - chr7_2:84808477-84808496 Msa1084440:intron 20.0%
!!! TTTTTTCATTTATAAACGTG+TGG - chr7_2:84808728-84808747 Msa1084440:intron 20.0%
!!! AAACTTCTGAAAAAGATTTA+AGG - chr7_2:84809490-84809509 Msa1084440:intron 20.0%
!!! AACTTCTGAAAAAGATTTAA+GGG - chr7_2:84809491-84809510 Msa1084440:intron 20.0%
!!! TTGTCATTTTCTGTAATATT+TGG - chr7_2:84809749-84809768 Msa1084440:intron 20.0%
!!! AAATATTTTATCCATTAAGC+TGG - chr7_2:84809847-84809866 Msa1084440:intron 20.0%
!! TTAAGTAACAAAAAAAGGAA+AGG + chr7_2:84810126-84810145 None:intergenic 20.0%
!! AATGTACAAAATTGAAAGTT+GGG + chr7_2:84810764-84810783 None:intergenic 20.0%
!! TAATGTACAAAATTGAAAGT+TGG + chr7_2:84810765-84810784 None:intergenic 20.0%
!!! ATTTTGTACATTACCATAAA+TGG - chr7_2:84810772-84810791 Msa1084440:intron 20.0%
!! TTGAAATGTTTAAACAAACA+CGG - chr7_2:84811440-84811459 Msa1084440:CDS 20.0%
!! TATTAAGGTTAAGGTAAAAA+TGG + chr7_2:84811757-84811776 None:intergenic 20.0%
!!! TTTTACCTTAACCTTAATAA+TGG - chr7_2:84811758-84811777 Msa1084440:CDS 20.0%
!! TCATTAATCTCAAAAAAATG+AGG - chr7_2:84812684-84812703 Msa1084440:intron 20.0%
!! CATTAATCTCAAAAAAATGA+GGG - chr7_2:84812685-84812704 Msa1084440:intron 20.0%
!! CATTCTATTGAATATCTTTA+TGG - chr7_2:84813042-84813061 Msa1084440:intron 20.0%
!! TTCTATTGAATATCTTTATG+GGG - chr7_2:84813044-84813063 Msa1084440:intron 20.0%
!! TACATTAGTAAGGATTATAT+CGG + chr7_2:84813528-84813547 None:intergenic 20.0%
!! AATAAAAAAAACTTCACTCA+CGG + chr7_2:84813813-84813832 None:intergenic 20.0%
! TAAATAGAACAATCATGCTA+TGG - chr7_2:84807827-84807846 Msa1084440:three_prime_UTR 25.0%
!! GTAATGTTTAAGTTCATGTT+TGG - chr7_2:84807950-84807969 Msa1084440:CDS 25.0%
! TTAAGTTCATGTTTGGATTA+CGG - chr7_2:84807957-84807976 Msa1084440:CDS 25.0%
! GTTAAGGTAAAAAAAAGATG+AGG + chr7_2:84807998-84808017 None:intergenic 25.0%
!!! GTTTGTTTAGGATTTTTTTG+GGG + chr7_2:84808271-84808290 None:intergenic 25.0%
!!! CGTTTGTTTAGGATTTTTTT+GGG + chr7_2:84808272-84808291 None:intergenic 25.0%
!! TTTTTATAGCAGAATCACAT+TGG - chr7_2:84808307-84808326 Msa1084440:intron 25.0%
!!! CATTGGTTTAAATTTAGACA+TGG - chr7_2:84808324-84808343 Msa1084440:intron 25.0%
! TAGTTATACCACAATTTAAC+TGG - chr7_2:84808821-84808840 Msa1084440:CDS 25.0%
! ATTCTGAATGAAAAATCAAG+AGG + chr7_2:84808933-84808952 None:intergenic 25.0%
!! TCATTTTCTGTAATATTTGG+TGG - chr7_2:84809752-84809771 Msa1084440:intron 25.0%
! AACTGATTATTAACAAGTCA+TGG - chr7_2:84809785-84809804 Msa1084440:intron 25.0%
! TGGTATAAAACTCATGTAAT+AGG + chr7_2:84810424-84810443 None:intergenic 25.0%
!! TTTTTCTCTTTATTACCTTG+CGG + chr7_2:84810480-84810499 None:intergenic 25.0%
! AAGAGAAAAAACTTAAGTGT+AGG - chr7_2:84810490-84810509 Msa1084440:intron 25.0%
!! TGTTGGAAATGTTTGAAATA+TGG + chr7_2:84810581-84810600 None:intergenic 25.0%
! AAGTAAAATGGAAGTAGAAT+AGG + chr7_2:84810610-84810629 None:intergenic 25.0%
! TAGGTTAAGATTGAAAAAAG+GGG + chr7_2:84810640-84810659 None:intergenic 25.0%
! CTAGGTTAAGATTGAAAAAA+GGG + chr7_2:84810641-84810660 None:intergenic 25.0%
! TCTAGGTTAAGATTGAAAAA+AGG + chr7_2:84810642-84810661 None:intergenic 25.0%
!! ATGTAATTTTCAAAATGCAC+AGG - chr7_2:84810731-84810750 Msa1084440:intron 25.0%
! ATGTACAAAATTGAAAGTTG+GGG + chr7_2:84810763-84810782 None:intergenic 25.0%
!!! TCAATTTTTGGACAAAAATC+AGG - chr7_2:84810813-84810832 Msa1084440:intron 25.0%
!! ATGTGACAAATTGAAGTTTT+GGG - chr7_2:84811132-84811151 Msa1084440:CDS 25.0%
! ATTCTTCCATTTATTGAAAG+TGG - chr7_2:84811157-84811176 Msa1084440:CDS 25.0%
!! ATACTCTAATGAGATGTTTT+AGG + chr7_2:84811550-84811569 None:intergenic 25.0%
! TTACATGATCTTAATTAGCA+TGG - chr7_2:84811801-84811820 Msa1084440:intron 25.0%
! AATAATTCATTAGGAACAAC+AGG + chr7_2:84812062-84812081 None:intergenic 25.0%
! TGGAAAACAGTATTCAAAAA+GGG + chr7_2:84812389-84812408 None:intergenic 25.0%
! TTGGAAAACAGTATTCAAAA+AGG + chr7_2:84812390-84812409 None:intergenic 25.0%
! TGTCATTAAGAAACATAGAT+TGG + chr7_2:84812409-84812428 None:intergenic 25.0%
! CAAAAAAGACTAAAACTAGA+AGG + chr7_2:84812661-84812680 None:intergenic 25.0%
! TTTCTTCAATTGATTGTTGA+TGG - chr7_2:84812889-84812908 Msa1084440:intron 25.0%
! TTCTTCAATTGATTGTTGAT+GGG - chr7_2:84812890-84812909 Msa1084440:intron 25.0%
! TTAAGTGTTCGAAATTTCAA+TGG - chr7_2:84813006-84813025 Msa1084440:intron 25.0%
! TTATTAAGCCTAAAAGAACT+TGG - chr7_2:84813099-84813118 Msa1084440:intron 25.0%
! ATGTATTGTAAGTTTCATCT+TGG - chr7_2:84813260-84813279 Msa1084440:intron 25.0%
! TAGGAACAATTACATTAGTA+AGG + chr7_2:84813538-84813557 None:intergenic 25.0%
! TCAACTAGTTCAAACAAATA+GGG - chr7_2:84813786-84813805 Msa1084440:five_prime_UTR 25.0%
!! TTTAAGTCTAAGATTCTACT+TGG - chr7_2:84813869-84813888 Msa1084440:five_prime_UTR 25.0%
!! GAGTTGATGTTGATGTATAA+AGG - chr7_2:84807537-84807556 Msa1084440:three_prime_UTR 30.0%
AAAAAAAGATGAGGTTTGTG+AGG + chr7_2:84807989-84808008 None:intergenic 30.0%
!!! GCGTTTGTTTAGGATTTTTT+TGG + chr7_2:84808273-84808292 None:intergenic 30.0%
ATGGTTTGATAGGAGAATAA+GGG + chr7_2:84808606-84808625 None:intergenic 30.0%
GGATAGCATATTTGGATAAT+GGG + chr7_2:84808638-84808657 None:intergenic 30.0%
AGGATAGCATATTTGGATAA+TGG + chr7_2:84808639-84808658 None:intergenic 30.0%
TATCATACAATGAAGCTCAT+AGG + chr7_2:84808659-84808678 None:intergenic 30.0%
TTGTGGTATAACTATTTGTC+AGG + chr7_2:84808815-84808834 None:intergenic 30.0%
!! AATTTTGGCCAGTTAAATTG+TGG + chr7_2:84808832-84808851 None:intergenic 30.0%
! TTTAACTGGCCAAAATTTTC+TGG - chr7_2:84808835-84808854 Msa1084440:CDS 30.0%
! TTAACTGGCCAAAATTTTCT+GGG - chr7_2:84808836-84808855 Msa1084440:CDS 30.0%
TTTAGACAGTCATGTAAAAG+GGG + chr7_2:84809581-84809600 None:intergenic 30.0%
GTTTAGACAGTCATGTAAAA+GGG + chr7_2:84809582-84809601 None:intergenic 30.0%
TTACCTATGCAAAAGTCAAT+CGG + chr7_2:84809604-84809623 None:intergenic 30.0%
!! ATTGACTTTTGCATAGGTAA+GGG - chr7_2:84809604-84809623 Msa1084440:intron 30.0%
!! ACTCTGAATTCAAGGTATTT+TGG - chr7_2:84809714-84809733 Msa1084440:intron 30.0%
TAAATATGAAACAGCTAGCT+AGG + chr7_2:84810220-84810239 None:intergenic 30.0%
! TTTTCTCTTTATTACCTTGC+GGG + chr7_2:84810479-84810498 None:intergenic 30.0%
TTGTTATATCTGTTTGTGTG+TGG - chr7_2:84810513-84810532 Msa1084440:intron 30.0%
AATATGGCAGTGGAATAATA+TGG + chr7_2:84810565-84810584 None:intergenic 30.0%
! AAATGTTTGAAATATGGCAG+TGG + chr7_2:84810575-84810594 None:intergenic 30.0%
AGTAGAATAGGTTATGTTGT+TGG + chr7_2:84810598-84810617 None:intergenic 30.0%
TTAAGATTGAAAAAAGGGGT+GGG + chr7_2:84810636-84810655 None:intergenic 30.0%
!!! TTTTTTTCATGTCAAGTGAC+TGG + chr7_2:84810844-84810863 None:intergenic 30.0%
TCACTTGACATGAAAAAAAG+AGG - chr7_2:84810845-84810864 Msa1084440:intron 30.0%
! GAAAAAAAGAGGTACATGAA+TGG - chr7_2:84810856-84810875 Msa1084440:intron 30.0%
!! TGGGTTTTATAATGGTACAT+TGG + chr7_2:84810900-84810919 None:intergenic 30.0%
!! TGTCAAAGTGGGTTTTATAA+TGG + chr7_2:84810908-84810927 None:intergenic 30.0%
!! TTTTTCAAAGCTCAGTGTAA+GGG + chr7_2:84810935-84810954 None:intergenic 30.0%
!! ATTTTTCAAAGCTCAGTGTA+AGG + chr7_2:84810936-84810955 None:intergenic 30.0%
ACTTCTTCTAATACGTATCA+TGG - chr7_2:84811010-84811029 Msa1084440:intron 30.0%
! CATGTGACAAATTGAAGTTT+TGG - chr7_2:84811131-84811150 Msa1084440:CDS 30.0%
AGAAATAATTTGACTGCGTA+TGG + chr7_2:84811360-84811379 None:intergenic 30.0%
AAGAAAGCTATTTAGACTAC+AGG - chr7_2:84811632-84811651 Msa1084440:intron 30.0%
GTGATCCATTATTAAGGTTA+AGG + chr7_2:84811766-84811785 None:intergenic 30.0%
TTACTGGTGATCCATTATTA+AGG + chr7_2:84811772-84811791 None:intergenic 30.0%
CTAATTAAGATCATGTAACC+TGG + chr7_2:84811799-84811818 None:intergenic 30.0%
TTAATGTTGGCAACAAAATG+AGG + chr7_2:84811923-84811942 None:intergenic 30.0%
CAGAAAGCAAACATTAATGT+TGG + chr7_2:84811936-84811955 None:intergenic 30.0%
!! AATGAAGGCATTGAAGAATA+CGG - chr7_2:84812332-84812351 Msa1084440:five_prime_UTR 30.0%
AATCTCAAAAAAATGAGGGT+TGG - chr7_2:84812689-84812708 Msa1084440:intron 30.0%
ATCTCAAAAAAATGAGGGTT+GGG - chr7_2:84812690-84812709 Msa1084440:intron 30.0%
! TCGTGAAAATTTTATCCAGT+TGG - chr7_2:84812800-84812819 Msa1084440:intron 30.0%
! CGTGAAAATTTTATCCAGTT+GGG - chr7_2:84812801-84812820 Msa1084440:intron 30.0%
TTGAACTGTATCAATTTCAC+TGG - chr7_2:84812835-84812854 Msa1084440:intron 30.0%
AAGAGGTTAACATCAATTCT+TGG - chr7_2:84812943-84812962 Msa1084440:intron 30.0%
TATTTGTTTATGCTCTTGCA+TGG - chr7_2:84813297-84813316 Msa1084440:intron 30.0%
TTGTTTCACTAGCATAACAA+CGG - chr7_2:84813338-84813357 Msa1084440:intron 30.0%
GATAGAAACTCAACTATAGA+TGG + chr7_2:84813366-84813385 None:intergenic 30.0%
ACTAATGTAATTGTTCCTAC+TGG - chr7_2:84813539-84813558 Msa1084440:intron 30.0%
! ACAGATTAATTTTCGGCTTT+GGG + chr7_2:84813573-84813592 None:intergenic 30.0%
! ACATGCCACAGATTAATTTT+CGG + chr7_2:84813580-84813599 None:intergenic 30.0%
TATGAGAAAATTTGCAGAAC+AGG - chr7_2:84813599-84813618 Msa1084440:intron 30.0%
AGATAAGGGTAAAAAATGCA+AGG + chr7_2:84813679-84813698 None:intergenic 30.0%
AATAAATTGCTTCCCATCAT+AGG + chr7_2:84813705-84813724 None:intergenic 30.0%
CTCAACTAGTTCAAACAAAT+AGG - chr7_2:84813785-84813804 Msa1084440:five_prime_UTR 30.0%
CAACTAGTTCAAACAAATAG+GGG - chr7_2:84813787-84813806 Msa1084440:five_prime_UTR 30.0%
! TGGACGAATTCACTATTTCT+CGG + chr7_2:84807612-84807631 None:intergenic 35.0%
TAGAAGCTCTACAACTACAA+TGG + chr7_2:84807692-84807711 None:intergenic 35.0%
! CAATATCTAGAGCTTAAGAG+GGG + chr7_2:84807756-84807775 None:intergenic 35.0%
! GCAATATCTAGAGCTTAAGA+GGG + chr7_2:84807757-84807776 None:intergenic 35.0%
! AGCAATATCTAGAGCTTAAG+AGG + chr7_2:84807758-84807777 None:intergenic 35.0%
TGCTATAAAAACACACCCAA+AGG + chr7_2:84808298-84808317 None:intergenic 35.0%
CATGGTTTGATAGGAGAATA+AGG + chr7_2:84808607-84808626 None:intergenic 35.0%
CTTATTCTCCTATCAAACCA+TGG - chr7_2:84808605-84808624 Msa1084440:intron 35.0%
AGCTCATAGGATAGCATATT+TGG + chr7_2:84808646-84808665 None:intergenic 35.0%
AATATACACAGAGGAAGAGA+GGG + chr7_2:84808787-84808806 None:intergenic 35.0%
AAATATACACAGAGGAAGAG+AGG + chr7_2:84808788-84808807 None:intergenic 35.0%
!! CCAAAATTTTCTGGGAAACT+CGG - chr7_2:84808844-84808863 Msa1084440:CDS 35.0%
AGAGGATAACAATGCTCAAA+AGG + chr7_2:84808915-84808934 None:intergenic 35.0%
GCAACAAAAGTAAGAAAGAC+AGG + chr7_2:84808965-84808984 None:intergenic 35.0%
TTGATTGAAACTGTTCCATG+AGG + chr7_2:84809009-84809028 None:intergenic 35.0%
AAAGGTGGAAACAATATGAG+TGG + chr7_2:84809058-84809077 None:intergenic 35.0%
AAGAAGAGAGTTTGCAAATG+TGG + chr7_2:84809081-84809100 None:intergenic 35.0%
TTCTAGATTCATAGAATGCC+TGG - chr7_2:84809153-84809172 Msa1084440:CDS 35.0%
TCTAGATTCATAGAATGCCT+GGG - chr7_2:84809154-84809173 Msa1084440:CDS 35.0%
AGTTGAGTATGAAGAAGTAG+AGG - chr7_2:84809311-84809330 Msa1084440:intron 35.0%
!!! TCTTTTTCAGAAGTTTCGTG+AGG + chr7_2:84809486-84809505 None:intergenic 35.0%
TTAGACAGTCATGTAAAAGG+GGG + chr7_2:84809580-84809599 None:intergenic 35.0%
GGTTTAGACAGTCATGTAAA+AGG + chr7_2:84809583-84809602 None:intergenic 35.0%
!! AAACCGATTGACTTTTGCAT+AGG - chr7_2:84809598-84809617 Msa1084440:intron 35.0%
!! GATTGACTTTTGCATAGGTA+AGG - chr7_2:84809603-84809622 Msa1084440:intron 35.0%
! TTTTGTGACCTTCAAGACAA+AGG - chr7_2:84809658-84809677 Msa1084440:intron 35.0%
TGCTAATTCCTTTGTCTTGA+AGG + chr7_2:84809669-84809688 None:intergenic 35.0%
GACAAAGGAATTAGCATCTA+AGG - chr7_2:84809673-84809692 Msa1084440:intron 35.0%
GTTGAACAACTCTGAATTCA+AGG - chr7_2:84809706-84809725 Msa1084440:intron 35.0%
!!! AGCACTTTATTTTTCTTCCC+TGG + chr7_2:84809920-84809939 None:intergenic 35.0%
!! GTTAAGCATCGGTTATTCAT+TGG - chr7_2:84809951-84809970 Msa1084440:intron 35.0%
!! TTGGTAATGTTCCTAAAGAG+TGG - chr7_2:84809970-84809989 Msa1084440:intron 35.0%
GACTGTAGAAGATATGAAGA+AGG - chr7_2:84809992-84810011 Msa1084440:intron 35.0%
TATGAAGTGTGTTGCATGTT+GGG - chr7_2:84810148-84810167 Msa1084440:intron 35.0%
ATGTTGGGTAATATTTGCCT+TGG - chr7_2:84810163-84810182 Msa1084440:intron 35.0%
! GCTAGCTGTTTCATATTTAC+AGG - chr7_2:84810221-84810240 Msa1084440:intron 35.0%
TAAAAGCAAATCCCCGATTA+CGG + chr7_2:84810263-84810282 None:intergenic 35.0%
ATGCTTGTGCAGAATATTCA+AGG - chr7_2:84810298-84810317 Msa1084440:intron 35.0%
ATGATGATTCAGAATTCCTC+GGG + chr7_2:84810386-84810405 None:intergenic 35.0%
GATGATGATTCAGAATTCCT+CGG + chr7_2:84810387-84810406 None:intergenic 35.0%
TAAGATTGAAAAAAGGGGTG+GGG + chr7_2:84810635-84810654 None:intergenic 35.0%
GTTAAGATTGAAAAAAGGGG+TGG + chr7_2:84810637-84810656 None:intergenic 35.0%
TTCTGCTATTGTCTATGTCT+AGG + chr7_2:84810659-84810678 None:intergenic 35.0%
TAGACATAGACAATAGCAGA+AGG - chr7_2:84810658-84810677 Msa1084440:intron 35.0%
GTACTTAGAGCAAAGTTGAA+GGG + chr7_2:84810702-84810721 None:intergenic 35.0%
TGTACTTAGAGCAAAGTTGA+AGG + chr7_2:84810703-84810722 None:intergenic 35.0%
!!! CCAATGGTTTTAGCCATTTA+TGG + chr7_2:84810788-84810807 None:intergenic 35.0%
CCATAAATGGCTAAAACCAT+TGG - chr7_2:84810785-84810804 Msa1084440:intron 35.0%
CCAAAAATTGACAAAGCCAA+TGG + chr7_2:84810804-84810823 None:intergenic 35.0%
!!! CCATTGGCTTTGTCAATTTT+TGG - chr7_2:84810801-84810820 Msa1084440:intron 35.0%
GTAAGGGATAATGTCAAAGT+GGG + chr7_2:84810919-84810938 None:intergenic 35.0%
TGTAAGGGATAATGTCAAAG+TGG + chr7_2:84810920-84810939 None:intergenic 35.0%
TATTAGAAGAAGTCTGTTGG+AGG + chr7_2:84811003-84811022 None:intergenic 35.0%
ACGTATTAGAAGAAGTCTGT+TGG + chr7_2:84811006-84811025 None:intergenic 35.0%
!! GTTAGAGTTGATGATGTTCT+TGG + chr7_2:84811040-84811059 None:intergenic 35.0%
TCAAAATGTCAGCAAGCAAT+TGG + chr7_2:84811095-84811114 None:intergenic 35.0%
!! GTCTTGCCACTTTCAATAAA+TGG + chr7_2:84811166-84811185 None:intergenic 35.0%
! ACTAAAATGCTGAGTTGAGA+GGG - chr7_2:84811184-84811203 Msa1084440:intron 35.0%
AGATGAGTCATGAGAAAGAA+TGG + chr7_2:84811336-84811355 None:intergenic 35.0%
!!! CAGTTTTGTTCTGTGTATGT+CGG + chr7_2:84811587-84811606 None:intergenic 35.0%
AACAGAGCTGAGACATAAAA+AGG - chr7_2:84811655-84811674 Msa1084440:intron 35.0%
! AAAAATAGAGCATCAAGCAG+TGG + chr7_2:84811831-84811850 None:intergenic 35.0%
!! TTTCCATTTTGTGTGCTGAT+TGG - chr7_2:84811849-84811868 Msa1084440:intron 35.0%
AAATTTCCTGATCCAGTAAG+AGG + chr7_2:84811881-84811900 None:intergenic 35.0%
TTTCGAAGAAGCGATATCTT+TGG - chr7_2:84811960-84811979 Msa1084440:CDS 35.0%
TTGCAGTTGCAAATAGACAA+AGG + chr7_2:84812014-84812033 None:intergenic 35.0%
CTGCAATTAGTTGAACCAAA+TGG - chr7_2:84812028-84812047 Msa1084440:CDS 35.0%
!! TAAGTTTTATAACCGTGACC+TGG - chr7_2:84812130-84812149 Msa1084440:CDS 35.0%
! TCTGAGTTATGTTTTCTGGA+AGG + chr7_2:84812191-84812210 None:intergenic 35.0%
! CGATTCTGAGTTATGTTTTC+TGG + chr7_2:84812195-84812214 None:intergenic 35.0%
AAAGAGCTGTTTGAACATCA+TGG - chr7_2:84812219-84812238 Msa1084440:CDS 35.0%
TCATGGAAAGATCACAAAAG+TGG - chr7_2:84812236-84812255 Msa1084440:CDS 35.0%
!! GTTTTGTTCACTTTGCTGAT+AGG - chr7_2:84812301-84812320 Msa1084440:five_prime_UTR 35.0%
! ACGGAGAAGTATGAAATTGA+TGG - chr7_2:84812351-84812370 Msa1084440:five_prime_UTR 35.0%
!! AACCATCAAGTTTTCTGGAA+TGG - chr7_2:84812439-84812458 Msa1084440:five_prime_UTR 35.0%
TCTCAAAAAAATGAGGGTTG+GGG - chr7_2:84812691-84812710 Msa1084440:intron 35.0%
CAAAACATAAATCACCCAAC+TGG + chr7_2:84812818-84812837 None:intergenic 35.0%
! TCAATTTCACTGGTTGTAAG+TGG - chr7_2:84812845-84812864 Msa1084440:intron 35.0%
!! TGTAAGTGGTTCTGAACTTT+CGG - chr7_2:84812859-84812878 Msa1084440:intron 35.0%
! CATAAGCACCAAGTTCTTTT+AGG + chr7_2:84813110-84813129 None:intergenic 35.0%
!! AAAAGAACTTGGTGCTTATG+TGG - chr7_2:84813110-84813129 Msa1084440:intron 35.0%
! ATCTTCTTGTTTGTGACTGT+AGG - chr7_2:84813383-84813402 Msa1084440:intron 35.0%
AACGATAATAACCGTAATCG+TGG - chr7_2:84813496-84813515 Msa1084440:intron 35.0%
!! AGATTAATTTTCGGCTTTGG+GGG + chr7_2:84813571-84813590 None:intergenic 35.0%
! CAGATTAATTTTCGGCTTTG+GGG + chr7_2:84813572-84813591 None:intergenic 35.0%
! CACAGATTAATTTTCGGCTT+TGG + chr7_2:84813574-84813593 None:intergenic 35.0%
CAAAGCCGAAAATTAATCTG+TGG - chr7_2:84813572-84813591 Msa1084440:intron 35.0%
AAAATTTGCAGAACAGGCAT+AGG - chr7_2:84813605-84813624 Msa1084440:intron 35.0%
! ACCCTTATCTTTTCCTATGA+TGG - chr7_2:84813689-84813708 Msa1084440:intron 35.0%
CCCATCATAGGAAAAGATAA+GGG + chr7_2:84813693-84813712 None:intergenic 35.0%
! CCCTTATCTTTTCCTATGAT+GGG - chr7_2:84813690-84813709 Msa1084440:intron 35.0%
TCCCATCATAGGAAAAGATA+AGG + chr7_2:84813694-84813713 None:intergenic 35.0%
ATAATCTTACTCCCATCTGT+AGG - chr7_2:84813734-84813753 Msa1084440:five_prime_UTR 35.0%
!!! ATTCTACTTGGTGCCAATTT+TGG - chr7_2:84813881-84813900 Msa1084440:five_prime_UTR 35.0%
! TTAAACTAGCCTGCCAAAAT+TGG + chr7_2:84813897-84813916 None:intergenic 35.0%
! ACGAATTCACTATTTCTCGG+CGG + chr7_2:84807609-84807628 None:intergenic 40.0%
AACCCTAAACTCGTAATCGT+TGG + chr7_2:84807655-84807674 None:intergenic 40.0%
CTTCGATTTCACTTCCAATC+AGG - chr7_2:84807718-84807737 Msa1084440:three_prime_UTR 40.0%
TAGAGCTTAAGAGGGGAAAA+CGG + chr7_2:84807749-84807768 None:intergenic 40.0%
TCCTAAACAAACGCATCCTT+TGG - chr7_2:84808279-84808298 Msa1084440:intron 40.0%
CCTAAACAAACGCATCCTTT+GGG - chr7_2:84808280-84808299 Msa1084440:intron 40.0%
ACATGGTTCTTGTCTCAGAA+TGG - chr7_2:84808341-84808360 Msa1084440:intron 40.0%
TCAAGAAGTAACGCTTCCTT+AGG - chr7_2:84808375-84808394 Msa1084440:intron 40.0%
CAAGAAGTAACGCTTCCTTA+GGG - chr7_2:84808376-84808395 Msa1084440:intron 40.0%
!! TGTGTTTGCGAGTTGGATTT+TGG - chr7_2:84808399-84808418 Msa1084440:intron 40.0%
!! TTTGCGAGTTGGATTTTGGA+GGG - chr7_2:84808403-84808422 Msa1084440:intron 40.0%
TTTGGGAGTTGAATTGTGGA+GGG + chr7_2:84808579-84808598 None:intergenic 40.0%
TGTGTTTGGGAGTTGAATTG+TGG + chr7_2:84808583-84808602 None:intergenic 40.0%
! AGGAGAATAAGGGTGTGTTT+GGG + chr7_2:84808596-84808615 None:intergenic 40.0%
! TAGGAGAATAAGGGTGTGTT+TGG + chr7_2:84808597-84808616 None:intergenic 40.0%
GTTGCAAACCATGGTTTGAT+AGG + chr7_2:84808616-84808635 None:intergenic 40.0%
ATATACACAGAGGAAGAGAG+GGG + chr7_2:84808786-84808805 None:intergenic 40.0%
CAGGAGACAAATATACACAG+AGG + chr7_2:84808796-84808815 None:intergenic 40.0%
! CCGAGTTTCCCAGAAAATTT+TGG + chr7_2:84808847-84808866 None:intergenic 40.0%
TTTGTTGCTATGCTACTCCT+TGG - chr7_2:84808977-84808996 Msa1084440:intron 40.0%
TGAAACTGTTCCATGAGGTA+TGG + chr7_2:84809004-84809023 None:intergenic 40.0%
TCTTACTCTGCTATTCCATC+TGG - chr7_2:84809032-84809051 Msa1084440:intron 40.0%
AAACAATATGAGTGGCCAGA+TGG + chr7_2:84809050-84809069 None:intergenic 40.0%
AGTTTGCAAATGTGGAAAGG+TGG + chr7_2:84809073-84809092 None:intergenic 40.0%
GAGAGTTTGCAAATGTGGAA+AGG + chr7_2:84809076-84809095 None:intergenic 40.0%
CTCTCTTCTTTGTATGCTTC+TGG - chr7_2:84809091-84809110 Msa1084440:CDS 40.0%
TCTAGAAAAGCAAGCTTGCA+GGG + chr7_2:84809140-84809159 None:intergenic 40.0%
ATCTAGAAAAGCAAGCTTGC+AGG + chr7_2:84809141-84809160 None:intergenic 40.0%
TGAGTATGAAGAAGTAGAGG+TGG - chr7_2:84809314-84809333 Msa1084440:intron 40.0%
AGAAGAAGAGGAAGAAGTAG+AGG - chr7_2:84809356-84809375 Msa1084440:intron 40.0%
GCCTCATCTTCTTCATCTAA+GGG + chr7_2:84809393-84809412 None:intergenic 40.0%
AGCCTCATCTTCTTCATCTA+AGG + chr7_2:84809394-84809413 None:intergenic 40.0%
ATGGTTCAGAGGTCTACATT+GGG - chr7_2:84809454-84809473 Msa1084440:intron 40.0%
! AAGGGTCTTTTGTCAATCTG+TGG - chr7_2:84809509-84809528 Msa1084440:intron 40.0%
! AGGGTCTTTTGTCAATCTGT+GGG - chr7_2:84809510-84809529 Msa1084440:intron 40.0%
TGCATAGGTAAGGGTTATGA+AGG - chr7_2:84809613-84809632 Msa1084440:intron 40.0%
GCATAGGTAAGGGTTATGAA+GGG - chr7_2:84809614-84809633 Msa1084440:intron 40.0%
CATAGGTAAGGGTTATGAAG+GGG - chr7_2:84809615-84809634 Msa1084440:intron 40.0%
! GGTCACAAAAGCATAACCTT+TGG + chr7_2:84809648-84809667 None:intergenic 40.0%
CACCATCTCAAGTTAAGCAT+CGG - chr7_2:84809940-84809959 Msa1084440:intron 40.0%
! AACCGATGCTTAACTTGAGA+TGG + chr7_2:84809945-84809964 None:intergenic 40.0%
TCTTCTACAGTCCACTCTTT+AGG + chr7_2:84809984-84810003 None:intergenic 40.0%
TATGAAGAAGGTTGTTGCCA+AGG - chr7_2:84810004-84810023 Msa1084440:intron 40.0%
CTATGAAGTGTGTTGCATGT+TGG - chr7_2:84810147-84810166 Msa1084440:intron 40.0%
ACACAAAATGCAAGTAGCCA+AGG + chr7_2:84810183-84810202 None:intergenic 40.0%
ATAACGATGCAATAGTGAGC+TGG - chr7_2:84810355-84810374 Msa1084440:intron 40.0%
TAACGATGCAATAGTGAGCT+GGG - chr7_2:84810356-84810375 Msa1084440:intron 40.0%
TGAATCATCATCATCCTCTC+AGG - chr7_2:84810395-84810414 Msa1084440:intron 40.0%
AATGGCTGATGTAGGCAATT+TGG - chr7_2:84810874-84810893 Msa1084440:intron 40.0%
TAAACCGCAAGGGAATTTCA+GGG + chr7_2:84810974-84810993 None:intergenic 40.0%
ATAAACCGCAAGGGAATTTC+AGG + chr7_2:84810975-84810994 None:intergenic 40.0%
TGAAATTCCCTTGCGGTTTA+TGG - chr7_2:84810974-84810993 Msa1084440:intron 40.0%
CTAACCACATCAACTGTCAA+AGG - chr7_2:84811055-84811074 Msa1084440:CDS 40.0%
! TTGTCCTTTGACAGTTGATG+TGG + chr7_2:84811062-84811081 None:intergenic 40.0%
! GACTAAAATGCTGAGTTGAG+AGG - chr7_2:84811183-84811202 Msa1084440:intron 40.0%
! CTAAAATGCTGAGTTGAGAG+GGG - chr7_2:84811185-84811204 Msa1084440:intron 40.0%
! ATACAGCGTCTGTTTTGCTT+TGG + chr7_2:84811520-84811539 None:intergenic 40.0%
AGAGCTGAGACATAAAAAGG+AGG - chr7_2:84811658-84811677 Msa1084440:intron 40.0%
CATGTAACCTGGCAATTTAC+TGG + chr7_2:84811788-84811807 None:intergenic 40.0%
! CAACAGGAAAGTACACCATT+TGG + chr7_2:84812046-84812065 None:intergenic 40.0%
!! TTTTCTTGTCCAGCTTTAGC+AGG + chr7_2:84812270-84812289 None:intergenic 40.0%
GGACAAGAAAAGAGCAGATA+TGG - chr7_2:84812279-84812298 Msa1084440:five_prime_UTR 40.0%
TGATAGGTCAAGTGCAATGA+AGG - chr7_2:84812317-84812336 Msa1084440:five_prime_UTR 40.0%
GTTTCTTAATGACAGCGAAC+TGG - chr7_2:84812415-84812434 Msa1084440:five_prime_UTR 40.0%
! CTGGTAACCATCAAGTTTTC+TGG - chr7_2:84812434-84812453 Msa1084440:five_prime_UTR 40.0%
GTCCATTCCAGAAAACTTGA+TGG + chr7_2:84812444-84812463 None:intergenic 40.0%
GAAGGTAAAGAGCAAGTTAC+CGG + chr7_2:84812643-84812662 None:intergenic 40.0%
! ATTGTAGCCAGTGTACTGAT+TGG + chr7_2:84812737-84812756 None:intergenic 40.0%
! ATGCCAATGCTTTTACCAGA+TGG - chr7_2:84813226-84813245 Msa1084440:intron 40.0%
! CTTCCATCTGGTAAAAGCAT+TGG + chr7_2:84813232-84813251 None:intergenic 40.0%
! CAATGCTTTTACCAGATGGA+AGG - chr7_2:84813230-84813249 Msa1084440:intron 40.0%
ACATATGCAATCCTTCCATC+TGG + chr7_2:84813244-84813263 None:intergenic 40.0%
GTTTATGCTCTTGCATGGTT+AGG - chr7_2:84813302-84813321 Msa1084440:intron 40.0%
AATAACCGTAATCGTGGTCA+TGG - chr7_2:84813502-84813521 Msa1084440:intron 40.0%
!! GGTTTTACGTTGGGCCTTAT+GGG + chr7_2:84807572-84807591 None:intergenic 45.0%
!! GTCCAGATGGGTTTTACGTT+GGG + chr7_2:84807581-84807600 None:intergenic 45.0%
!! TGTCCAGATGGGTTTTACGT+TGG + chr7_2:84807582-84807601 None:intergenic 45.0%
CGCCAACGATTACGAGTTTA+GGG - chr7_2:84807650-84807669 Msa1084440:three_prime_UTR 45.0%
TGGAAGTGAAATCGAAGTCG+AGG + chr7_2:84807715-84807734 None:intergenic 45.0%
!! GGAAAACGGAAGTACCTGAT+TGG + chr7_2:84807735-84807754 None:intergenic 45.0%
CCCAAAGGATGCGTTTGTTT+AGG + chr7_2:84808283-84808302 None:intergenic 45.0%
!! GTTTGCGAGTTGGATTTTGG+AGG - chr7_2:84808402-84808421 Msa1084440:intron 45.0%
!! TTGCGAGTTGGATTTTGGAG+GGG - chr7_2:84808404-84808423 Msa1084440:intron 45.0%
GTTTGGGAGTTGAATTGTGG+AGG + chr7_2:84808580-84808599 None:intergenic 45.0%
!! GGATAATGGGTTGCAAACCA+TGG + chr7_2:84808625-84808644 None:intergenic 45.0%
! GCATCTTTTTGTCTTGTCCC+AGG + chr7_2:84809174-84809193 None:intergenic 45.0%
! CCAGAATCTGTGGGTTTTTC+AGG + chr7_2:84809237-84809256 None:intergenic 45.0%
CCTGAAAAACCCACAGATTC+TGG - chr7_2:84809234-84809253 Msa1084440:CDS 45.0%
GTGAGCAGGTAGATCTTGAT+GGG - chr7_2:84809256-84809275 Msa1084440:intron 45.0%
TGAGCAGGTAGATCTTGATG+GGG - chr7_2:84809257-84809276 Msa1084440:intron 45.0%
TGATGGGGACAATGATCAAG+AGG - chr7_2:84809272-84809291 Msa1084440:intron 45.0%
TGATCAAGAGGAATCAAGCG+AGG - chr7_2:84809284-84809303 Msa1084440:intron 45.0%
GTATGAAGAAGTAGAGGTGG+AGG - chr7_2:84809317-84809336 Msa1084440:intron 45.0%
AGTGGAAGAGGAAGAAGAAG+AGG - chr7_2:84809344-84809363 Msa1084440:intron 45.0%
GCCCTTAGATGAAGAAGATG+AGG - chr7_2:84809389-84809408 Msa1084440:intron 45.0%
ATGTAGACCTCTGAACCATG+AGG + chr7_2:84809453-84809472 None:intergenic 45.0%
CATGGTTCAGAGGTCTACAT+TGG - chr7_2:84809453-84809472 Msa1084440:intron 45.0%
TGGTTCAGAGGTCTACATTG+GGG - chr7_2:84809455-84809474 Msa1084440:intron 45.0%
TTGTCAATCTGTGGGAGAAG+TGG - chr7_2:84809518-84809537 Msa1084440:intron 45.0%
ATGAAGGGGAAAGAAGCCAA+AGG - chr7_2:84809629-84809648 Msa1084440:intron 45.0%
! ATTAGCATCTAAGGCTCTCG+AGG - chr7_2:84809682-84809701 Msa1084440:intron 45.0%
ACTACATGCAGCCAGCTTAA+TGG + chr7_2:84809861-84809880 None:intergenic 45.0%
AAGAAGGTTGTTGCCAAGGT+TGG - chr7_2:84810008-84810027 Msa1084440:intron 45.0%
CATTTCGGTGGAACTGTTGA+AGG - chr7_2:84810040-84810059 Msa1084440:intron 45.0%
TGAAACAGCTAGCTAGGTCA+AGG + chr7_2:84810214-84810233 None:intergenic 45.0%
! CACAGAGTTCTAGCCGTAAT+CGG - chr7_2:84810247-84810266 Msa1084440:intron 45.0%
! ACAGAGTTCTAGCCGTAATC+GGG - chr7_2:84810248-84810267 Msa1084440:intron 45.0%
CATGTAATAGGTCACCTGAG+AGG + chr7_2:84810412-84810431 None:intergenic 45.0%
TTCGTAAATCACTTCCCGCA+AGG - chr7_2:84810462-84810481 Msa1084440:intron 45.0%
TCTGTTTGTGTGTGGCTGAA+TGG - chr7_2:84810521-84810540 Msa1084440:intron 45.0%
GGTACATGAATGGCTGATGT+AGG - chr7_2:84810866-84810885 Msa1084440:intron 45.0%
ACAACCCTGAAATTCCCTTG+CGG - chr7_2:84810967-84810986 Msa1084440:intron 45.0%
CTTCATCTCAGCTCTGTTCT+GGG + chr7_2:84811615-84811634 None:intergenic 45.0%
TCTTCATCTCAGCTCTGTTC+TGG + chr7_2:84811616-84811635 None:intergenic 45.0%
TGGATCACCAGTAAATTGCC+AGG - chr7_2:84811778-84811797 Msa1084440:CDS 45.0%
CCTCCAATCAGCACACAAAA+TGG + chr7_2:84811855-84811874 None:intergenic 45.0%
!!! CCATTTTGTGTGCTGATTGG+AGG - chr7_2:84811852-84811871 Msa1084440:intron 45.0%
TTTCACCTGTACTAAGCACC+AGG + chr7_2:84812151-84812170 None:intergenic 45.0%
!!! CAAGTTTTCTGGAATGGACC+AGG - chr7_2:84812445-84812464 Msa1084440:five_prime_UTR 45.0%
GAATGGACCAGGTCAAACTT+TGG - chr7_2:84812456-84812475 Msa1084440:five_prime_UTR 45.0%
GAGCATTCCAAAGTTTGACC+TGG + chr7_2:84812466-84812485 None:intergenic 45.0%
GATGACTTCTGATCTGCTTG+TGG + chr7_2:84812499-84812518 None:intergenic 45.0%
CAAGCAGATCAGAAGTCATC+TGG - chr7_2:84812499-84812518 Msa1084440:five_prime_UTR 45.0%
TATCCACCTCCTCTTGGTTA+TGG - chr7_2:84812559-84812578 Msa1084440:five_prime_UTR 45.0%
ATACCATAACCAAGAGGAGG+TGG + chr7_2:84812565-84812584 None:intergenic 45.0%
ACCTCCTCTTGGTTATGGTA+TGG - chr7_2:84812564-84812583 Msa1084440:five_prime_UTR 45.0%
ACCATACCATAACCAAGAGG+AGG + chr7_2:84812568-84812587 None:intergenic 45.0%
CCAACCATACCATAACCAAG+AGG + chr7_2:84812571-84812590 None:intergenic 45.0%
CCTCTTGGTTATGGTATGGT+TGG - chr7_2:84812568-84812587 Msa1084440:five_prime_UTR 45.0%
CTTGGTTATGGTATGGTTGG+AGG - chr7_2:84812571-84812590 Msa1084440:five_prime_UTR 45.0%
!! TGGAAGCATCTTCTTAGCCT+AGG + chr7_2:84812717-84812736 None:intergenic 45.0%
GATGCTTCCAATCAGTACAC+TGG - chr7_2:84812727-84812746 Msa1084440:intron 45.0%
CTCTTTCAGCCTATGATGAG+GGG + chr7_2:84812928-84812947 None:intergenic 45.0%
CCTCTTTCAGCCTATGATGA+GGG + chr7_2:84812929-84812948 None:intergenic 45.0%
ACCTCTTTCAGCCTATGATG+AGG + chr7_2:84812930-84812949 None:intergenic 45.0%
AATGTGCAGCCACTGATGTA+TGG - chr7_2:84813172-84813191 Msa1084440:intron 45.0%
GGAGCATGTTGTTGAAAACC+TGG + chr7_2:84813415-84813434 None:intergenic 45.0%
!!! TTAATTTTCGGCTTTGGGGG+AGG + chr7_2:84813568-84813587 None:intergenic 45.0%
GGTAAAAAATGCAAGGCAGC+AGG + chr7_2:84813672-84813691 None:intergenic 45.0%
! AGTGCTCTAAGCCTACAGAT+GGG + chr7_2:84813748-84813767 None:intergenic 45.0%
!!! TACTTGGTGCCAATTTTGGC+AGG - chr7_2:84813885-84813904 Msa1084440:five_prime_UTR 45.0%
!!! AAATTTTAAATTTAAATCTT+TGG + chr7_2:84810444-84810463 None:intergenic 5.0%
! TTACGTTGGGCCTTATGGGT+CGG + chr7_2:84807568-84807587 None:intergenic 50.0%
! GGGTTTTACGTTGGGCCTTA+TGG + chr7_2:84807573-84807592 None:intergenic 50.0%
! CGCGTGCTTTGTTCTTAAGG+TGG + chr7_2:84807632-84807651 None:intergenic 50.0%
! TGGCGCGTGCTTTGTTCTTA+AGG + chr7_2:84807635-84807654 None:intergenic 50.0%
GCGCCAACGATTACGAGTTT+AGG - chr7_2:84807649-84807668 Msa1084440:three_prime_UTR 50.0%
CAACTCGCAAACACACCCTA+AGG + chr7_2:84808394-84808413 None:intergenic 50.0%
CTTAGGGTGTGTTTGCGAGT+TGG - chr7_2:84808392-84808411 Msa1084440:intron 50.0%
! TTTGGAGGGGACGACTTTTG+AGG - chr7_2:84808417-84808436 Msa1084440:intron 50.0%
! TTGGAGGGGACGACTTTTGA+GGG - chr7_2:84808418-84808437 Msa1084440:intron 50.0%
ACTCCTTGGTCCATACCTCA+TGG - chr7_2:84808991-84809010 Msa1084440:intron 50.0%
GTTCCATGAGGTATGGACCA+AGG + chr7_2:84808997-84809016 None:intergenic 50.0%
AGCTTGCAGGGCAACTATGA+AGG + chr7_2:84809128-84809147 None:intergenic 50.0%
CCCTGGTGACTCTGAATTTC+GGG + chr7_2:84809202-84809221 None:intergenic 50.0%
CCCGAAATTCAGAGTCACCA+GGG - chr7_2:84809199-84809218 Msa1084440:CDS 50.0%
CCCCTGGTGACTCTGAATTT+CGG + chr7_2:84809203-84809222 None:intergenic 50.0%
CCGAAATTCAGAGTCACCAG+GGG - chr7_2:84809200-84809219 Msa1084440:CDS 50.0%
CGAAATTCAGAGTCACCAGG+GGG - chr7_2:84809201-84809220 Msa1084440:CDS 50.0%
ACCTGCTCACCAGAATCTGT+GGG + chr7_2:84809246-84809265 None:intergenic 50.0%
TACCTGCTCACCAGAATCTG+TGG + chr7_2:84809247-84809266 None:intergenic 50.0%
GGTGAGCAGGTAGATCTTGA+TGG - chr7_2:84809255-84809274 Msa1084440:intron 50.0%
AGTAGAGGTGGAGGAAGAAG+TGG - chr7_2:84809326-84809345 Msa1084440:intron 50.0%
TAGACCTCTGAACCATGAGG+TGG + chr7_2:84809450-84809469 None:intergenic 50.0%
GGTTCAGAGGTCTACATTGG+GGG - chr7_2:84809456-84809475 Msa1084440:intron 50.0%
TCACTCCTTTCTGCGTTTCC+AGG - chr7_2:84809899-84809918 Msa1084440:intron 50.0%
CACTCCTTTCTGCGTTTCCA+GGG - chr7_2:84809900-84809919 Msa1084440:intron 50.0%
TCTTCCCTGGAAACGCAGAA+AGG + chr7_2:84809907-84809926 None:intergenic 50.0%
GTTCCACCGAAATGACTCCA+GGG + chr7_2:84810034-84810053 None:intergenic 50.0%
AGTTCCACCGAAATGACTCC+AGG + chr7_2:84810035-84810054 None:intergenic 50.0%
CGATTACGGCTAGAACTCTG+TGG + chr7_2:84810249-84810268 None:intergenic 50.0%
! CAGAGTTCTAGCCGTAATCG+GGG - chr7_2:84810249-84810268 Msa1084440:intron 50.0%
AGGGGTGGGGTGAAGTAAAA+TGG + chr7_2:84810622-84810641 None:intergenic 50.0%
GAGGAAGCCATAAACCGCAA+GGG + chr7_2:84810984-84811003 None:intergenic 50.0%
! AAATGCTGAGTTGAGAGGGG+AGG - chr7_2:84811188-84811207 Msa1084440:intron 50.0%
! AATGCTGAGTTGAGAGGGGA+GGG - chr7_2:84811189-84811208 Msa1084440:intron 50.0%
CTGTGTATGTCGGTAGAGAG+AGG + chr7_2:84811577-84811596 None:intergenic 50.0%
!! GATTGGAGGTGTCCTCTTAC+TGG - chr7_2:84811866-84811885 Msa1084440:intron 50.0%
AGGTGTCCTCTTACTGGATC+AGG - chr7_2:84811872-84811891 Msa1084440:intron 50.0%
CTGTACTAAGCACCAGGTCA+CGG + chr7_2:84812145-84812164 None:intergenic 50.0%
! CTTGTCCAGCTTTAGCAGGA+GGG + chr7_2:84812266-84812285 None:intergenic 50.0%
! TCTTGTCCAGCTTTAGCAGG+AGG + chr7_2:84812267-84812286 None:intergenic 50.0%
GGTTATGGTATGGTTGGAGG+TGG - chr7_2:84812574-84812593 Msa1084440:five_prime_UTR 50.0%
GGTATGGTTGGAGGTGGATA+TGG - chr7_2:84812580-84812599 Msa1084440:five_prime_UTR 50.0%
AAAAATGAGGGTTGGGGCCT+AGG - chr7_2:84812697-84812716 Msa1084440:intron 50.0%
ATGTTCCCTCCCCTCATCAT+AGG - chr7_2:84812916-84812935 Msa1084440:intron 50.0%
TTCAGCCTATGATGAGGGGA+GGG + chr7_2:84812924-84812943 None:intergenic 50.0%
TTTCAGCCTATGATGAGGGG+AGG + chr7_2:84812925-84812944 None:intergenic 50.0%
CCCTCATCATAGGCTGAAAG+AGG - chr7_2:84812926-84812945 Msa1084440:intron 50.0%
AGCGAGAGAGCAAGAGAGAT+AGG + chr7_2:84813137-84813156 None:intergenic 50.0%
CTTGCTCTCTCGCTGATAAG+AGG - chr7_2:84813143-84813162 Msa1084440:intron 50.0%
ATGCTCCATCACCAGTATCC+CGG - chr7_2:84813428-84813447 Msa1084440:intron 50.0%
! AGTAGTGGTGTCAGCTCAAG+TGG - chr7_2:84813460-84813479 Msa1084440:intron 50.0%
ATCGGCCATGACCACGATTA+CGG + chr7_2:84813510-84813529 None:intergenic 50.0%
! CAGTGCTCTAAGCCTACAGA+TGG + chr7_2:84813749-84813768 None:intergenic 50.0%
CATCTGTAGGCTTAGAGCAC+TGG - chr7_2:84813747-84813766 Msa1084440:five_prime_UTR 50.0%
! TACGTTGGGCCTTATGGGTC+GGG + chr7_2:84807567-84807586 None:intergenic 55.0%
GGCCCAACGTAAAACCCATC+TGG - chr7_2:84807576-84807595 Msa1084440:three_prime_UTR 55.0%
TCGGCGGTGTATGTCCAGAT+GGG + chr7_2:84807593-84807612 None:intergenic 55.0%
CACAGAGGAAGAGAGGGGAA+AGG + chr7_2:84808781-84808800 None:intergenic 55.0%
GCCCGAAATTCAGAGTCACC+AGG - chr7_2:84809198-84809217 Msa1084440:CDS 55.0%
TCAGGTTCACTGTTTCCCCC+TGG + chr7_2:84809219-84809238 None:intergenic 55.0%
ACCCACAGATTCTGGTGAGC+AGG - chr7_2:84809242-84809261 Msa1084440:CDS 55.0%
GGTGGAGGAAGAAGTGGAAG+AGG - chr7_2:84809332-84809351 Msa1084440:intron 55.0%
CTTCTTGCGCTTCCACCTCA+TGG - chr7_2:84809435-84809454 Msa1084440:intron 55.0%
GCTTCCACCTCATGGTTCAG+AGG - chr7_2:84809443-84809462 Msa1084440:intron 55.0%
ATCTGTGGGAGAAGTGGCAG+AGG - chr7_2:84809524-84809543 Msa1084440:intron 55.0%
AATGACTCCAGGGCCAACCT+TGG + chr7_2:84810024-84810043 None:intergenic 55.0%
! GGTTGGCCCTGGAGTCATTT+CGG - chr7_2:84810025-84810044 Msa1084440:intron 55.0%
GGAGGAAGCCATAAACCGCA+AGG + chr7_2:84810985-84811004 None:intergenic 55.0%
CGTGACCTGGTGCTTAGTAC+AGG - chr7_2:84812143-84812162 Msa1084440:CDS 55.0%
!! GGAGGTGGATATGGTGCTGT+TGG - chr7_2:84812589-84812608 Msa1084440:five_prime_UTR 55.0%
!! GGATATGGTGCTGTTGGTGC+AGG - chr7_2:84812595-84812614 Msa1084440:five_prime_UTR 55.0%
!! GGTGCTGTTGGTGCAGGATA+TGG - chr7_2:84812601-84812620 Msa1084440:intron 55.0%
GCAGCCACTGATGTATGGTC+CGG - chr7_2:84813177-84813196 Msa1084440:intron 55.0%
CAGCCACTGATGTATGGTCC+GGG - chr7_2:84813178-84813197 Msa1084440:intron 55.0%
GGCATCATTGTCATGCCAGC+AGG + chr7_2:84813211-84813230 None:intergenic 55.0%
TGTGACTGTAGGCAACAGCC+AGG - chr7_2:84813394-84813413 Msa1084440:intron 55.0%
ACCACTACTCCTACCATGCC+GGG + chr7_2:84813449-84813468 None:intergenic 55.0%
CACCACTACTCCTACCATGC+CGG + chr7_2:84813450-84813469 None:intergenic 55.0%
! CTTTGGGGGAGGTAACCAGT+AGG + chr7_2:84813557-84813576 None:intergenic 55.0%
!! AGAGCACTGGCGATGACTCA+CGG - chr7_2:84813760-84813779 Msa1084440:five_prime_UTR 55.0%
CTCGGCGGTGTATGTCCAGA+TGG + chr7_2:84807594-84807613 None:intergenic 60.0%
! GTTGTTGCCAAGGTTGGCCC+TGG - chr7_2:84810014-84810033 Msa1084440:intron 60.0%
TGGCCCTGGAGTCATTTCGG+TGG - chr7_2:84810028-84810047 Msa1084440:intron 60.0%
! CTGAGTTGAGAGGGGAGGGT+CGG - chr7_2:84811193-84811212 Msa1084440:intron 60.0%
GCTCTCCCTCCTGCTAAAGC+TGG - chr7_2:84812258-84812277 Msa1084440:exon 60.0%
CCAAGAGGAGGTGGATACGC+AGG + chr7_2:84812556-84812575 None:intergenic 60.0%
CCTGCGTATCCACCTCCTCT+TGG - chr7_2:84812553-84812572 Msa1084440:five_prime_UTR 60.0%
!! GGTGCAGGATATGGTGCTGC+TGG - chr7_2:84812610-84812629 Msa1084440:intron 60.0%
!! TGGTGCTGCTGGCTTTGCAC+CGG - chr7_2:84812621-84812640 Msa1084440:intron 60.0%
GCTCCCGGACCATACATCAG+TGG + chr7_2:84813184-84813203 None:intergenic 60.0%
ATGCCAGCAGGAGTTGCTCC+CGG + chr7_2:84813199-84813218 None:intergenic 60.0%
CCATGCCGGGATACTGGTGA+TGG + chr7_2:84813436-84813455 None:intergenic 60.0%
CCATCACCAGTATCCCGGCA+TGG - chr7_2:84813433-84813452 Msa1084440:intron 60.0%
CACCAGTATCCCGGCATGGT+AGG - chr7_2:84813437-84813456 Msa1084440:intron 60.0%
CTCCTACCATGCCGGGATAC+TGG + chr7_2:84813442-84813461 None:intergenic 60.0%
TCCCGGCATGGTAGGAGTAG+TGG - chr7_2:84813445-84813464 Msa1084440:intron 60.0%
AAAGGCCCGCCCGACCCATA+AGG - chr7_2:84807555-84807574 Msa1084440:three_prime_UTR 65.0%
! TTGGGCCTTATGGGTCGGGC+GGG + chr7_2:84807563-84807582 None:intergenic 65.0%
! GTTGGGCCTTATGGGTCGGG+CGG + chr7_2:84807564-84807583 None:intergenic 65.0%
TAGTGAGCTGGGCTGACCCG+AGG - chr7_2:84810367-84810386 Msa1084440:intron 65.0%
GGTCCGGGAGCAACTCCTGC+TGG - chr7_2:84813193-84813212 Msa1084440:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 84807498 84813940 84807498 ID=Msa1084440;Name=Msa1084440
chr7_2 mRNA 84807498 84813940 84807498 ID=Msa1084440-mRNA-1;Parent=Msa1084440;Name=Msa1084440-mRNA-1;_AED=0.11;_eAED=0.11;_QI=586|1|1|1|0.87|0.77|9|397|469
chr7_2 exon 84807498 84808033 84807498 ID=Msa1084440-mRNA-1:exon:22813;Parent=Msa1084440-mRNA-1
chr7_2 exon 84808172 84808257 84808172 ID=Msa1084440-mRNA-1:exon:22812;Parent=Msa1084440-mRNA-1
chr7_2 exon 84808796 84808971 84808796 ID=Msa1084440-mRNA-1:exon:22811;Parent=Msa1084440-mRNA-1
chr7_2 exon 84809066 84809273 84809066 ID=Msa1084440-mRNA-1:exon:22810;Parent=Msa1084440-mRNA-1
chr7_2 exon 84811022 84811195 84811022 ID=Msa1084440-mRNA-1:exon:22809;Parent=Msa1084440-mRNA-1
chr7_2 exon 84811377 84811517 84811377 ID=Msa1084440-mRNA-1:exon:22808;Parent=Msa1084440-mRNA-1
chr7_2 exon 84811711 84811818 84811711 ID=Msa1084440-mRNA-1:exon:22807;Parent=Msa1084440-mRNA-1
chr7_2 exon 84811893 84812614 84811893 ID=Msa1084440-mRNA-1:exon:22806;Parent=Msa1084440-mRNA-1
chr7_2 exon 84813699 84813940 84813699 ID=Msa1084440-mRNA-1:exon:22805;Parent=Msa1084440-mRNA-1
chr7_2 five_prime_UTR 84813699 84813940 84813699 ID=Msa1084440-mRNA-1:five_prime_utr;Parent=Msa1084440-mRNA-1
chr7_2 five_prime_UTR 84812271 84812614 84812271 ID=Msa1084440-mRNA-1:five_prime_utr;Parent=Msa1084440-mRNA-1
chr7_2 CDS 84811893 84812270 84811893 ID=Msa1084440-mRNA-1:cds;Parent=Msa1084440-mRNA-1
chr7_2 CDS 84811711 84811818 84811711 ID=Msa1084440-mRNA-1:cds;Parent=Msa1084440-mRNA-1
chr7_2 CDS 84811377 84811517 84811377 ID=Msa1084440-mRNA-1:cds;Parent=Msa1084440-mRNA-1
chr7_2 CDS 84811022 84811195 84811022 ID=Msa1084440-mRNA-1:cds;Parent=Msa1084440-mRNA-1
chr7_2 CDS 84809066 84809273 84809066 ID=Msa1084440-mRNA-1:cds;Parent=Msa1084440-mRNA-1
chr7_2 CDS 84808796 84808971 84808796 ID=Msa1084440-mRNA-1:cds;Parent=Msa1084440-mRNA-1
chr7_2 CDS 84808172 84808257 84808172 ID=Msa1084440-mRNA-1:cds;Parent=Msa1084440-mRNA-1
chr7_2 CDS 84807895 84808033 84807895 ID=Msa1084440-mRNA-1:cds;Parent=Msa1084440-mRNA-1
chr7_2 three_prime_UTR 84807498 84807894 84807498 ID=Msa1084440-mRNA-1:three_prime_utr;Parent=Msa1084440-mRNA-1
Gene Sequence

>Msa1084440

ATGCCTGGGACAAGACAAAAAGATGCAACTGCCCGAAATTCAGAGTCACCAGGGGGAAACAGTGAACCTGAAAAACCCACAGATTCTGGTGAGCAGGTAGATCTTGATGGGGACAATGATCAAGAGGAATCAAGCGAGGAAGAAGTTGAGTATGAAGAAGTAGAGGTGGAGGAAGAAGTGGAAGAGGAAGAAGAAGAGGAAGAAGTAGAGGAAGAGAGTAAGCCCTTAGATGAAGAAGATGAGGCTGACAAAAAGAAACACGCTGAGCTTCTTGCGCTTCCACCTCATGGTTCAGAGGTCTACATTGGGGGAATTCCTCACGAAACTTCTGAAAAAGATTTAAGGGTCTTTTGTCAATCTGTGGGAGAAGTGGCAGAGGTAAGGGTTATGAAGGGGAAAGAAGCCAAAGGTTATGCTTTTGTGACCTTCAAGACAAAGGAATTAGCATCTAAGGCTCTCGAGGAGTTGAACAACTCTGAATTCAAGGGAAGAAAAATAAAGTGCTCACCATCTCAAGTTAAGCATCGGTTATTCATTGGTAATGTTCCTAAAGAGTGGACTGTAGAAGATATGAAGAAGGTTGTTGCCAAGGTTGGCCCTGGAGTCATTTCGGTGGAACTGTTGAAGGATCCACAGAGTTCTAGCCGTAATCGGGGATTTGCTTTTATTGAGTATCACAATCATGCTTGTGCAGAATATTCAAGGCAGAAGATGTCAAACTCAAACTTTAAACTTGACAATAACGATGCAATAGTGAGCTGGGCTGACCCGAGGAATTCTGAATCATCATCATCCTCTCAGGTGAAAGCAGTATATGTAAAGAACCTTCCAGAAAACATAACTCAGAATCGTCTTAAAGAGCTGTTTGAACATCATGGAAAGATCACAAAAGTGGCTCTCCCTCCTGCTAAAGCTGGACAAGAAAAGAGCAGATATGGTTTTGTTCACTTTGCTGATAGGTCAAGTGCAATGAAGGCATTGAAGAATACGGAGAAGTATGAAATTGATGGTCAAACTTTGGAATGCTCACTTGCTAAGCCACAAGCAGATCAGAAGTCATCTGGTGCATCAAATTCATTCAACTCTGCTGTACTTCCTGCGTATCCACCTCCTCTTGGTTATGGTATGGTTGGAGGTGGATATGGTGCTGTTGGTGCAGGATATGGTGCTGCTGGCTTTGCACCGCCACTGATGTATGGTCCGGGAGCAACTCCTGCTGGCATGACAATGATGCCAATGCTTTTACCAGATGGAAGGATTGCATATGTATTGCAACAGCCAGGTTTTCAACAACATGCTCCATCACCAGTATCCCGGCATGGTAGGAGTAGTGGTGTCAGCTCAAGTGGTGAAAAACGCAGTAACGATAATAACCGTAATCGTGGTCATGGCCGATATAATCCTTACTAA
Protein sequence

>Msa1084440

MPGTRQKDATARNSESPGGNSEPEKPTDSGEQVDLDGDNDQEESSEEEVEYEEVEVEEEVEEEEEEEEVEEESKPLDEEDEADKKKHAELLALPPHGSEVYIGGIPHETSEKDLRVFCQSVGEVAEVRVMKGKEAKGYAFVTFKTKELASKALEELNNSEFKGRKIKCSPSQVKHRLFIGNVPKEWTVEDMKKVVAKVGPGVISVELLKDPQSSSRNRGFAFIEYHNHACAEYSRQKMSNSNFKLDNNDAIVSWADPRNSESSSSSQVKAVYVKNLPENITQNRLKELFEHHGKITKVALPPAKAGQEKSRYGFVHFADRSSAMKALKNTEKYEIDGQTLECSLAKPQADQKSSGASNSFNSAVLPAYPPPLGYGMVGGGYGAVGAGYGAAGFAPPLMYGPGATPAGMTMMPMLLPDGRIAYVLQQPGFQQHAPSPVSRHGRSSGVSSSGEKRSNDNNRNRGHGRYNPY*