Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1170940 | XP_003615540.1 | 60.142 | 424 | 159 | 8 | 1 | 421 | 1 | 417 | 5.78e-160 | 467 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1170940 | sp|Q8GY84|RH10_ARATH | 45.057 | 435 | 223 | 5 | 1 | 424 | 8 | 437 | 1.89e-117 | 353 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0661340 | Msa1170940 | 0.960095 | 3.588913e-118 | -8.615850e-47 |
Msa1037780 | Msa1170940 | 0.812377 | 4.371997e-51 | -8.615850e-47 |
Msa0348550 | Msa1170940 | 0.807830 | 4.172311e-50 | -8.615850e-47 |
Msa1121490 | Msa1170940 | 0.800477 | 1.415375e-48 | -8.615850e-47 |
Msa1170940 | Msa1296890 | 0.832676 | 8.251779e-56 | -8.615850e-47 |
Msa1170940 | Msa1388930 | 0.822064 | 2.892611e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1170940 | MtrunA17_Chr5g0429221 | 60.142 | 424 | 159 | 8 | 1 | 421 | 1 | 417 | 5.32e-164 | 467 |
Msa1170940 | MtrunA17_Chr6g0483491 | 54.703 | 404 | 175 | 5 | 1 | 402 | 8 | 405 | 1.29e-134 | 394 |
Msa1170940 | MtrunA17_Chr7g0236841 | 54.208 | 404 | 177 | 5 | 1 | 402 | 8 | 405 | 1.83e-133 | 390 |
Msa1170940 | MtrunA17_Chr1g0155201 | 50.667 | 300 | 129 | 7 | 123 | 420 | 10 | 292 | 8.72e-79 | 248 |
Msa1170940 | MtrunA17_Chr1g0155691 | 84.211 | 152 | 22 | 1 | 245 | 396 | 1 | 150 | 6.67e-78 | 240 |
Msa1170940 | MtrunA17_Chr2g0310581 | 31.630 | 411 | 260 | 7 | 3 | 403 | 53 | 452 | 5.80e-55 | 190 |
Msa1170940 | MtrunA17_Chr3g0098121 | 28.537 | 410 | 275 | 8 | 3 | 401 | 152 | 554 | 4.88e-41 | 155 |
Msa1170940 | MtrunA17_Chr2g0300291 | 30.585 | 376 | 246 | 9 | 3 | 370 | 141 | 509 | 3.58e-40 | 152 |
Msa1170940 | MtrunA17_Chr7g0247191 | 28.531 | 354 | 237 | 9 | 30 | 379 | 176 | 517 | 8.45e-37 | 140 |
Msa1170940 | MtrunA17_Chr2g0307471 | 29.949 | 394 | 244 | 14 | 2 | 379 | 90 | 467 | 1.29e-36 | 140 |
Msa1170940 | MtrunA17_Chr4g0040761 | 26.558 | 369 | 260 | 6 | 20 | 384 | 35 | 396 | 6.98e-36 | 140 |
Msa1170940 | MtrunA17_Chr4g0076491 | 29.134 | 381 | 230 | 9 | 1 | 352 | 285 | 654 | 1.02e-35 | 139 |
Msa1170940 | MtrunA17_Chr7g0247181 | 27.684 | 354 | 240 | 9 | 30 | 379 | 166 | 507 | 1.43e-35 | 137 |
Msa1170940 | MtrunA17_Chr7g0247221 | 27.684 | 354 | 240 | 9 | 30 | 379 | 169 | 510 | 2.09e-35 | 137 |
Msa1170940 | MtrunA17_Chr7g0271121 | 29.700 | 367 | 233 | 12 | 29 | 381 | 131 | 486 | 1.13e-34 | 136 |
Msa1170940 | MtrunA17_Chr4g0003441 | 29.518 | 332 | 214 | 9 | 30 | 352 | 134 | 454 | 1.26e-34 | 134 |
Msa1170940 | MtrunA17_Chr1g0193491 | 27.320 | 388 | 263 | 10 | 4 | 380 | 115 | 494 | 5.19e-34 | 134 |
Msa1170940 | MtrunA17_Chr8g0349951 | 45.513 | 156 | 80 | 3 | 1 | 156 | 8 | 158 | 1.18e-33 | 123 |
Msa1170940 | MtrunA17_Chr3g0121351 | 29.620 | 368 | 226 | 12 | 6 | 350 | 150 | 507 | 1.54e-33 | 132 |
Msa1170940 | MtrunA17_Chr6g0449741 | 28.272 | 382 | 230 | 10 | 1 | 352 | 247 | 614 | 3.76e-33 | 132 |
Msa1170940 | MtrunA17_Chr3g0107851 | 29.499 | 339 | 214 | 8 | 29 | 350 | 142 | 472 | 4.32e-33 | 130 |
Msa1170940 | MtrunA17_Chr2g0277821 | 26.923 | 364 | 254 | 5 | 1 | 357 | 502 | 860 | 7.50e-33 | 131 |
Msa1170940 | MtrunA17_Chr4g0062301 | 31.385 | 325 | 203 | 10 | 28 | 341 | 121 | 436 | 3.32e-32 | 128 |
Msa1170940 | MtrunA17_Chr1g0149251 | 28.616 | 318 | 211 | 9 | 42 | 352 | 2 | 310 | 6.92e-32 | 124 |
Msa1170940 | MtrunA17_Chr5g0442191 | 27.461 | 386 | 249 | 11 | 4 | 374 | 82 | 451 | 1.15e-31 | 127 |
Msa1170940 | MtrunA17_Chr3g0095031 | 27.704 | 379 | 257 | 10 | 4 | 374 | 91 | 460 | 1.43e-31 | 126 |
Msa1170940 | MtrunA17_Chr3g0114081 | 28.255 | 361 | 220 | 9 | 25 | 355 | 37 | 388 | 4.70e-31 | 125 |
Msa1170940 | MtrunA17_Chr1g0176041 | 28.493 | 365 | 233 | 10 | 6 | 350 | 159 | 515 | 1.64e-30 | 124 |
Msa1170940 | MtrunA17_Chr8g0347171 | 28.529 | 340 | 199 | 6 | 30 | 341 | 186 | 509 | 2.41e-30 | 123 |
Msa1170940 | MtrunA17_Chr7g0236831 | 23.490 | 447 | 265 | 9 | 29 | 400 | 188 | 632 | 3.32e-30 | 123 |
Msa1170940 | MtrunA17_Chr8g0347161 | 26.979 | 341 | 205 | 7 | 29 | 341 | 127 | 451 | 1.20e-29 | 121 |
Msa1170940 | MtrunA17_Chr8g0347151 | 28.875 | 329 | 212 | 5 | 30 | 341 | 227 | 550 | 1.67e-29 | 121 |
Msa1170940 | MtrunA17_Chr2g0330401 | 30.000 | 320 | 209 | 7 | 29 | 341 | 121 | 432 | 2.54e-28 | 116 |
Msa1170940 | MtrunA17_Chr2g0299681 | 28.657 | 335 | 219 | 10 | 30 | 357 | 68 | 389 | 3.69e-28 | 115 |
Msa1170940 | MtrunA17_Chr8g0386451 | 28.238 | 386 | 238 | 10 | 28 | 389 | 312 | 682 | 3.96e-28 | 117 |
Msa1170940 | MtrunA17_Chr4g0063551 | 28.134 | 359 | 230 | 8 | 15 | 352 | 155 | 506 | 4.36e-28 | 117 |
Msa1170940 | MtrunA17_Chr1g0155211 | 59.551 | 89 | 35 | 1 | 1 | 89 | 1 | 88 | 1.37e-27 | 105 |
Msa1170940 | MtrunA17_Chr5g0409981 | 26.887 | 424 | 245 | 16 | 1 | 380 | 102 | 504 | 3.29e-27 | 113 |
Msa1170940 | MtrunA17_Chr4g0004301 | 26.221 | 389 | 215 | 12 | 42 | 364 | 71 | 453 | 1.16e-26 | 112 |
Msa1170940 | MtrunA17_Chr4g0070981 | 27.628 | 333 | 221 | 9 | 30 | 355 | 68 | 387 | 1.50e-26 | 110 |
Msa1170940 | MtrunA17_Chr6g0449911 | 26.347 | 334 | 222 | 8 | 29 | 350 | 190 | 511 | 1.67e-26 | 112 |
Msa1170940 | MtrunA17_Chr1g0200181 | 25.291 | 344 | 230 | 9 | 29 | 355 | 170 | 503 | 2.35e-26 | 111 |
Msa1170940 | MtrunA17_Chr7g0270131 | 24.528 | 371 | 253 | 10 | 1 | 357 | 230 | 587 | 5.76e-26 | 110 |
Msa1170940 | MtrunA17_Chr2g0329931 | 27.463 | 335 | 223 | 9 | 30 | 357 | 68 | 389 | 6.73e-26 | 108 |
Msa1170940 | MtrunA17_Chr5g0434301 | 25.964 | 389 | 216 | 12 | 42 | 364 | 71 | 453 | 8.58e-26 | 109 |
Msa1170940 | MtrunA17_Chr5g0443991 | 28.286 | 350 | 211 | 10 | 28 | 355 | 100 | 431 | 4.39e-25 | 108 |
Msa1170940 | MtrunA17_Chr8g0342861 | 26.462 | 359 | 244 | 9 | 30 | 381 | 68 | 413 | 6.69e-25 | 105 |
Msa1170940 | MtrunA17_Chr1g0157691 | 24.781 | 343 | 233 | 8 | 29 | 355 | 172 | 505 | 1.07e-24 | 106 |
Msa1170940 | MtrunA17_Chr4g0034411 | 25.564 | 399 | 270 | 14 | 18 | 399 | 90 | 478 | 2.14e-24 | 105 |
Msa1170940 | MtrunA17_Chr2g0293631 | 27.164 | 335 | 222 | 8 | 29 | 352 | 521 | 844 | 5.47e-23 | 102 |
Msa1170940 | MtrunA17_Chr6g0461751 | 23.009 | 339 | 248 | 6 | 29 | 359 | 165 | 498 | 1.07e-22 | 100 |
Msa1170940 | MtrunA17_Chr7g0263771 | 26.126 | 333 | 227 | 10 | 30 | 355 | 159 | 479 | 9.03e-22 | 97.8 |
Msa1170940 | MtrunA17_Chr2g0297261 | 24.107 | 336 | 229 | 9 | 30 | 355 | 61 | 380 | 1.37e-21 | 96.3 |
Msa1170940 | MtrunA17_Chr4g0039471 | 31.863 | 204 | 121 | 4 | 3 | 199 | 223 | 415 | 6.15e-21 | 94.4 |
Msa1170940 | MtrunA17_Chr4g0039471 | 42.857 | 98 | 54 | 2 | 3 | 99 | 2 | 98 | 9.99e-13 | 69.3 |
Msa1170940 | MtrunA17_Chr1g0192021 | 24.115 | 452 | 276 | 13 | 2 | 398 | 25 | 464 | 1.04e-20 | 94.7 |
Msa1170940 | MtrunA17_Chr4g0058591 | 28.094 | 299 | 186 | 10 | 29 | 313 | 227 | 510 | 8.59e-20 | 91.7 |
Msa1170940 | MtrunA17_Chr1g0179761 | 25.745 | 369 | 208 | 16 | 3 | 335 | 80 | 418 | 2.14e-19 | 90.1 |
Msa1170940 | MtrunA17_Chr6g0475251 | 27.147 | 361 | 230 | 12 | 38 | 379 | 137 | 483 | 2.23e-19 | 90.9 |
Msa1170940 | MtrunA17_Chr6g0466611 | 26.205 | 332 | 210 | 13 | 34 | 341 | 172 | 492 | 2.78e-17 | 84.3 |
Msa1170940 | MtrunA17_Chr1g0204391 | 25.905 | 359 | 214 | 11 | 38 | 360 | 78 | 420 | 5.18e-16 | 80.1 |
Msa1170940 | MtrunA17_Chr4g0062321 | 30.144 | 209 | 137 | 6 | 113 | 318 | 31 | 233 | 5.68e-15 | 74.3 |
Msa1170940 | MtrunA17_Chr1g0169331 | 23.711 | 388 | 254 | 10 | 30 | 381 | 17 | 398 | 1.24e-13 | 72.0 |
Msa1170940 | MtrunA17_Chr4g0029191 | 25.847 | 236 | 149 | 5 | 3 | 215 | 44 | 276 | 1.38e-13 | 72.8 |
Msa1170940 | MtrunA17_Chr2g0301281 | 25.847 | 236 | 149 | 5 | 3 | 215 | 41 | 273 | 1.75e-13 | 72.4 |
Msa1170940 | MtrunA17_Chr3g0137901 | 32.381 | 105 | 69 | 1 | 250 | 352 | 42 | 146 | 1.70e-12 | 65.9 |
Msa1170940 | MtrunA17_Chr8g0354761 | 21.714 | 350 | 250 | 8 | 30 | 365 | 34 | 373 | 2.30e-12 | 68.6 |
Msa1170940 | MtrunA17_Chr3g0137891 | 29.747 | 158 | 102 | 5 | 42 | 196 | 2 | 153 | 4.91e-12 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1170940 | AT5G60990.1 | 45.057 | 435 | 223 | 5 | 1 | 424 | 8 | 437 | 1.92e-118 | 353 |
Msa1170940 | AT1G16280.1 | 32.039 | 412 | 249 | 10 | 7 | 403 | 63 | 458 | 2.21e-58 | 199 |
Msa1170940 | AT4G16630.1 | 28.788 | 396 | 268 | 7 | 3 | 391 | 168 | 556 | 2.75e-42 | 159 |
Msa1170940 | AT3G61240.2 | 26.816 | 358 | 249 | 7 | 30 | 384 | 151 | 498 | 3.57e-38 | 144 |
Msa1170940 | AT3G61240.1 | 26.816 | 358 | 249 | 7 | 30 | 384 | 151 | 498 | 3.57e-38 | 144 |
Msa1170940 | AT5G65900.1 | 30.435 | 368 | 234 | 10 | 28 | 384 | 179 | 535 | 7.86e-38 | 145 |
Msa1170940 | AT2G45810.1 | 27.429 | 350 | 239 | 8 | 30 | 375 | 181 | 519 | 1.35e-35 | 138 |
Msa1170940 | AT3G18600.1 | 28.704 | 324 | 220 | 5 | 23 | 341 | 109 | 426 | 1.62e-35 | 138 |
Msa1170940 | AT4G00660.1 | 26.437 | 348 | 243 | 7 | 30 | 374 | 158 | 495 | 4.83e-35 | 136 |
Msa1170940 | AT4G00660.2 | 26.437 | 348 | 243 | 7 | 30 | 374 | 158 | 495 | 4.83e-35 | 136 |
Msa1170940 | AT2G33730.1 | 29.443 | 377 | 234 | 10 | 1 | 352 | 312 | 681 | 1.71e-34 | 136 |
Msa1170940 | AT5G11170.1 | 28.743 | 334 | 218 | 9 | 28 | 352 | 71 | 393 | 4.71e-34 | 132 |
Msa1170940 | AT5G11200.1 | 28.743 | 334 | 218 | 9 | 28 | 352 | 71 | 393 | 4.71e-34 | 132 |
Msa1170940 | AT3G22310.2 | 26.753 | 385 | 257 | 10 | 3 | 375 | 117 | 488 | 2.05e-33 | 132 |
Msa1170940 | AT3G22310.1 | 26.753 | 385 | 257 | 10 | 3 | 375 | 117 | 488 | 2.26e-33 | 132 |
Msa1170940 | AT5G26742.1 | 29.630 | 351 | 224 | 10 | 3 | 341 | 103 | 442 | 2.57e-33 | 133 |
Msa1170940 | AT5G26742.2 | 29.630 | 351 | 224 | 10 | 3 | 341 | 103 | 442 | 2.57e-33 | 133 |
Msa1170940 | AT1G20920.2 | 25.481 | 416 | 289 | 9 | 8 | 413 | 197 | 601 | 2.88e-33 | 133 |
Msa1170940 | AT5G63630.1 | 30.395 | 329 | 207 | 5 | 30 | 341 | 81 | 404 | 1.83e-32 | 129 |
Msa1170940 | AT3G16840.1 | 25.169 | 445 | 255 | 9 | 36 | 404 | 224 | 666 | 1.84e-32 | 130 |
Msa1170940 | AT3G16840.2 | 25.169 | 445 | 255 | 9 | 36 | 404 | 225 | 667 | 1.88e-32 | 130 |
Msa1170940 | AT5G26742.3 | 30.341 | 323 | 203 | 9 | 31 | 341 | 37 | 349 | 2.16e-32 | 130 |
Msa1170940 | AT1G77030.1 | 26.944 | 360 | 248 | 7 | 29 | 382 | 54 | 404 | 3.74e-32 | 129 |
Msa1170940 | AT5G63630.2 | 30.395 | 329 | 207 | 5 | 30 | 341 | 275 | 598 | 4.32e-32 | 129 |
Msa1170940 | AT1G20920.4 | 26.124 | 356 | 249 | 6 | 8 | 355 | 535 | 884 | 6.07e-32 | 129 |
Msa1170940 | AT1G20920.6 | 26.124 | 356 | 249 | 6 | 8 | 355 | 535 | 884 | 6.07e-32 | 129 |
Msa1170940 | AT1G20920.3 | 26.124 | 356 | 249 | 6 | 8 | 355 | 535 | 884 | 6.07e-32 | 129 |
Msa1170940 | AT1G20920.7 | 26.124 | 356 | 249 | 6 | 8 | 355 | 535 | 884 | 6.07e-32 | 129 |
Msa1170940 | AT1G20920.5 | 26.124 | 356 | 249 | 6 | 8 | 355 | 535 | 884 | 6.07e-32 | 129 |
Msa1170940 | AT1G20920.1 | 26.124 | 356 | 249 | 6 | 8 | 355 | 535 | 884 | 6.07e-32 | 129 |
Msa1170940 | AT1G31970.1 | 29.107 | 347 | 210 | 11 | 29 | 353 | 140 | 472 | 8.64e-32 | 127 |
Msa1170940 | AT3G22330.1 | 24.675 | 385 | 265 | 10 | 3 | 375 | 105 | 476 | 3.95e-31 | 126 |
Msa1170940 | AT5G08620.1 | 27.184 | 412 | 273 | 9 | 30 | 422 | 107 | 510 | 3.98e-31 | 125 |
Msa1170940 | AT5G08610.1 | 27.941 | 340 | 201 | 6 | 30 | 341 | 409 | 732 | 1.05e-30 | 125 |
Msa1170940 | AT5G63120.2 | 29.050 | 358 | 228 | 9 | 29 | 371 | 191 | 537 | 1.61e-30 | 124 |
Msa1170940 | AT1G28180.1 | 29.499 | 339 | 214 | 10 | 34 | 359 | 4 | 330 | 1.82e-30 | 121 |
Msa1170940 | AT5G11170.2 | 28.125 | 320 | 210 | 9 | 42 | 352 | 2 | 310 | 2.10e-30 | 120 |
Msa1170940 | AT3G58510.1 | 27.945 | 365 | 233 | 11 | 6 | 350 | 157 | 511 | 7.74e-30 | 122 |
Msa1170940 | AT3G58510.3 | 27.945 | 365 | 233 | 11 | 6 | 350 | 157 | 511 | 7.74e-30 | 122 |
Msa1170940 | AT3G58510.2 | 27.945 | 365 | 233 | 11 | 6 | 350 | 157 | 511 | 7.74e-30 | 122 |
Msa1170940 | AT5G05450.1 | 27.451 | 357 | 229 | 10 | 23 | 355 | 36 | 386 | 1.43e-29 | 121 |
Msa1170940 | AT3G09620.2 | 26.685 | 356 | 218 | 8 | 8 | 355 | 403 | 723 | 2.35e-29 | 121 |
Msa1170940 | AT3G09620.1 | 26.647 | 334 | 209 | 6 | 27 | 355 | 420 | 722 | 2.55e-29 | 121 |
Msa1170940 | AT1G63250.1 | 28.184 | 369 | 243 | 9 | 28 | 380 | 353 | 715 | 6.55e-29 | 120 |
Msa1170940 | AT2G42520.2 | 28.338 | 367 | 231 | 12 | 6 | 350 | 165 | 521 | 8.89e-29 | 119 |
Msa1170940 | AT2G42520.1 | 28.338 | 367 | 231 | 12 | 6 | 350 | 165 | 521 | 8.89e-29 | 119 |
Msa1170940 | AT2G42520.3 | 28.338 | 367 | 231 | 12 | 6 | 350 | 165 | 521 | 8.89e-29 | 119 |
Msa1170940 | AT3G58570.1 | 28.338 | 367 | 231 | 12 | 6 | 350 | 152 | 508 | 1.92e-28 | 118 |
Msa1170940 | AT5G11200.3 | 25.135 | 370 | 226 | 10 | 28 | 352 | 71 | 434 | 7.70e-28 | 115 |
Msa1170940 | AT3G13920.2 | 27.761 | 335 | 222 | 9 | 30 | 357 | 67 | 388 | 2.91e-27 | 112 |
Msa1170940 | AT1G55150.2 | 28.045 | 353 | 228 | 8 | 1 | 341 | 123 | 461 | 3.23e-27 | 114 |
Msa1170940 | AT3G13920.5 | 27.761 | 335 | 222 | 9 | 30 | 357 | 71 | 392 | 3.34e-27 | 112 |
Msa1170940 | AT3G13920.1 | 27.019 | 359 | 242 | 9 | 30 | 381 | 67 | 412 | 3.66e-27 | 112 |
Msa1170940 | AT1G55150.1 | 28.045 | 353 | 228 | 8 | 1 | 341 | 98 | 436 | 3.90e-27 | 113 |
Msa1170940 | AT3G13920.4 | 27.019 | 359 | 242 | 9 | 30 | 381 | 62 | 407 | 4.30e-27 | 112 |
Msa1170940 | AT3G13920.3 | 27.019 | 359 | 242 | 9 | 30 | 381 | 57 | 402 | 4.54e-27 | 112 |
Msa1170940 | AT1G72730.1 | 27.463 | 335 | 223 | 9 | 30 | 357 | 69 | 390 | 6.92e-27 | 112 |
Msa1170940 | AT4G15850.1 | 24.943 | 441 | 249 | 16 | 2 | 376 | 44 | 468 | 2.19e-26 | 111 |
Msa1170940 | AT4G33370.1 | 26.136 | 352 | 217 | 11 | 29 | 355 | 123 | 456 | 2.37e-26 | 111 |
Msa1170940 | AT5G51280.1 | 25.872 | 344 | 228 | 9 | 29 | 355 | 172 | 505 | 3.36e-26 | 111 |
Msa1170940 | AT2G07750.1 | 27.100 | 369 | 247 | 9 | 28 | 380 | 400 | 762 | 3.79e-26 | 112 |
Msa1170940 | AT3G09720.2 | 26.524 | 328 | 222 | 9 | 30 | 350 | 168 | 483 | 5.64e-26 | 110 |
Msa1170940 | AT3G09720.1 | 26.524 | 328 | 222 | 9 | 30 | 350 | 168 | 483 | 5.64e-26 | 110 |
Msa1170940 | AT1G54270.2 | 26.741 | 359 | 243 | 9 | 30 | 381 | 62 | 407 | 8.19e-26 | 108 |
Msa1170940 | AT1G71370.1 | 26.979 | 341 | 228 | 10 | 30 | 355 | 43 | 377 | 8.33e-26 | 110 |
Msa1170940 | AT1G54270.1 | 26.741 | 359 | 243 | 9 | 30 | 381 | 67 | 412 | 9.65e-26 | 108 |
Msa1170940 | AT5G14610.7 | 26.036 | 338 | 218 | 9 | 29 | 350 | 56 | 377 | 1.18e-25 | 109 |
Msa1170940 | AT5G14610.3 | 26.036 | 338 | 218 | 9 | 29 | 350 | 56 | 377 | 1.18e-25 | 109 |
Msa1170940 | AT5G14610.2 | 26.036 | 338 | 218 | 9 | 29 | 350 | 187 | 508 | 1.97e-25 | 109 |
Msa1170940 | AT5G14610.5 | 26.036 | 338 | 218 | 9 | 29 | 350 | 195 | 516 | 2.04e-25 | 109 |
Msa1170940 | AT5G14610.6 | 26.036 | 338 | 218 | 9 | 29 | 350 | 187 | 508 | 2.08e-25 | 109 |
Msa1170940 | AT3G01540.1 | 25.749 | 334 | 224 | 9 | 29 | 350 | 184 | 505 | 2.47e-25 | 108 |
Msa1170940 | AT2G47330.1 | 25.798 | 376 | 242 | 12 | 1 | 357 | 227 | 584 | 2.59e-25 | 109 |
Msa1170940 | AT3G01540.4 | 25.749 | 334 | 224 | 9 | 29 | 350 | 184 | 505 | 2.72e-25 | 108 |
Msa1170940 | AT3G01540.2 | 25.749 | 334 | 224 | 9 | 29 | 350 | 184 | 505 | 2.72e-25 | 108 |
Msa1170940 | AT3G01540.3 | 25.749 | 334 | 224 | 9 | 29 | 350 | 184 | 505 | 2.72e-25 | 108 |
Msa1170940 | AT5G14610.1 | 26.036 | 338 | 218 | 9 | 29 | 350 | 255 | 576 | 3.48e-25 | 108 |
Msa1170940 | AT3G06480.1 | 27.326 | 344 | 210 | 11 | 29 | 352 | 461 | 784 | 2.52e-24 | 106 |
Msa1170940 | AT1G51380.1 | 24.156 | 385 | 270 | 10 | 1 | 377 | 21 | 391 | 3.52e-24 | 103 |
Msa1170940 | AT3G19760.1 | 25.455 | 330 | 232 | 7 | 30 | 355 | 63 | 382 | 4.36e-24 | 103 |
Msa1170940 | AT5G54910.1 | 28.406 | 345 | 216 | 13 | 30 | 357 | 98 | 428 | 3.84e-23 | 102 |
Msa1170940 | AT3G02065.3 | 23.706 | 367 | 263 | 8 | 3 | 359 | 111 | 470 | 6.22e-22 | 98.2 |
Msa1170940 | AT3G02065.2 | 23.706 | 367 | 263 | 8 | 3 | 359 | 111 | 470 | 6.22e-22 | 98.2 |
Msa1170940 | AT5G63120.3 | 28.475 | 295 | 190 | 7 | 29 | 313 | 191 | 474 | 4.24e-21 | 95.9 |
Msa1170940 | AT5G63120.4 | 28.475 | 295 | 190 | 7 | 29 | 313 | 191 | 474 | 4.24e-21 | 95.9 |
Msa1170940 | AT5G63120.5 | 28.475 | 295 | 190 | 7 | 29 | 313 | 191 | 474 | 4.24e-21 | 95.9 |
Msa1170940 | AT5G63120.1 | 28.475 | 295 | 190 | 7 | 29 | 313 | 191 | 474 | 4.83e-21 | 95.5 |
Msa1170940 | AT3G02065.1 | 23.373 | 338 | 243 | 7 | 32 | 359 | 2 | 333 | 1.69e-20 | 92.8 |
Msa1170940 | AT3G53110.1 | 24.513 | 359 | 228 | 14 | 6 | 338 | 95 | 436 | 3.35e-18 | 87.0 |
Msa1170940 | AT1G12770.2 | 23.821 | 403 | 231 | 13 | 2 | 341 | 110 | 499 | 1.49e-17 | 85.1 |
Msa1170940 | AT1G12770.1 | 23.821 | 403 | 231 | 13 | 2 | 341 | 110 | 499 | 1.49e-17 | 85.1 |
Msa1170940 | AT5G14610.4 | 25.080 | 311 | 201 | 9 | 29 | 325 | 195 | 487 | 1.56e-17 | 85.1 |
Msa1170940 | AT1G71280.1 | 25.667 | 300 | 180 | 10 | 30 | 318 | 44 | 311 | 2.28e-17 | 84.3 |
Msa1170940 | AT4G34910.1 | 25.243 | 412 | 245 | 13 | 2 | 359 | 46 | 448 | 2.92e-17 | 84.7 |
Msa1170940 | AT1G71280.2 | 25.325 | 308 | 187 | 10 | 20 | 316 | 34 | 309 | 8.10e-17 | 81.6 |
Msa1170940 | AT5G11200.2 | 31.765 | 170 | 107 | 5 | 30 | 196 | 73 | 236 | 1.97e-16 | 81.6 |
Msa1170940 | AT3G06480.2 | 25.641 | 312 | 194 | 10 | 29 | 322 | 461 | 752 | 2.57e-16 | 81.6 |
Msa1170940 | AT4G09730.1 | 25.455 | 330 | 215 | 11 | 34 | 341 | 143 | 463 | 5.97e-16 | 80.5 |
Msa1170940 | AT2G40700.1 | 25.751 | 233 | 149 | 5 | 3 | 214 | 31 | 260 | 7.00e-15 | 77.0 |
Msa1170940 | AT5G19210.2 | 23.188 | 345 | 226 | 12 | 23 | 338 | 96 | 430 | 1.92e-14 | 75.5 |
Find 123 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGATGCTAAGCGTCTGTTTA+AGG | 0.144937 | 8_1:+351423 | Msa1170940:CDS |
TATGAGGTTGCTCTGAATTT+AGG | 0.220249 | 8_1:-350568 | None:intergenic |
TTGGAGTCATTCGTTGAATT+AGG | 0.295648 | 8_1:+349897 | Msa1170940:five_prime_UTR |
TGTGTAGGAAATGAAAGAAT+TGG | 0.310442 | 8_1:+354294 | Msa1170940:intron |
TCCTTGAATGCGTTCAAGTC+TGG | 0.317685 | 8_1:+352194 | Msa1170940:CDS |
GCTTTGATTCTTAAGAATCT+TGG | 0.333972 | 8_1:+352024 | Msa1170940:CDS |
TGACTCATATAACGCATAAT+AGG | 0.339378 | 8_1:-352060 | None:intergenic |
CTGTGGTAAAACGCTTCTTC+TGG | 0.360851 | 8_1:+352002 | Msa1170940:CDS |
AACAAAAGCCACAGTCTTCC+CGG | 0.368904 | 8_1:-350154 | None:intergenic |
ATGAAACGTCTCCTTTCATC+TGG | 0.375442 | 8_1:-352456 | None:intergenic |
TGTGTCCGCAATAGAATATT+TGG | 0.377383 | 8_1:-351558 | None:intergenic |
AGGAGACGTTTCATTATGAT+AGG | 0.379041 | 8_1:+352465 | Msa1170940:CDS |
TCAAGGAGGGCGTGCGATAT+AGG | 0.387150 | 8_1:-350180 | None:intergenic |
CCTGGGCTTATCTTCTGAAT+TGG | 0.387426 | 8_1:+349946 | Msa1170940:CDS |
TTGTAGTGACTTCCTTAGTA+AGG | 0.397718 | 8_1:+352235 | Msa1170940:CDS |
CCCAGACTTGAACGCATTCA+AGG | 0.403087 | 8_1:-352195 | None:intergenic |
TTTGGAAGGGCTTGTTATTG+AGG | 0.406096 | 8_1:+352639 | Msa1170940:CDS |
CATTATGGTTGTACCTTCAC+AGG | 0.413267 | 8_1:-351449 | None:intergenic |
CGAAATATAGGCTCTCAGTT+TGG | 0.421593 | 8_1:+350362 | Msa1170940:CDS |
ACGCAGGCTTTAGTATTGAT+TGG | 0.424271 | 8_1:+354401 | Msa1170940:three_prime_UTR |
ATCTGGGCTCACAAAGGAAA+TGG | 0.429905 | 8_1:-352439 | None:intergenic |
TTAGGTTGGGTCCGGTTTCA+AGG | 0.432064 | 8_1:-350197 | None:intergenic |
TCTGCAGGAAATGATGTGTT+TGG | 0.432334 | 8_1:+350114 | Msa1170940:intron |
GCCGACCACTTTCGAAATAT+AGG | 0.432797 | 8_1:+350350 | Msa1170940:CDS |
AAAGCCTGCGTGCATACGTC+AGG | 0.440798 | 8_1:-354389 | None:intergenic |
GTGTAGGAAATGAAAGAATT+GGG | 0.441743 | 8_1:+354295 | Msa1170940:intron |
AGGTGATATAAGATTAGGTC+AGG | 0.443590 | 8_1:-350679 | None:intergenic |
TATTATGCGTTATATGAGTC+AGG | 0.446972 | 8_1:+352062 | Msa1170940:CDS |
CAAGAGCAAGAGAAAATCCT+TGG | 0.448775 | 8_1:-350711 | None:intergenic |
AGATATTCCAGCGGTAGATA+TGG | 0.449221 | 8_1:+352262 | Msa1170940:CDS |
CCTTGAATGCGTTCAAGTCT+GGG | 0.465626 | 8_1:+352195 | Msa1170940:CDS |
GCTGTATCCTGCACCATTTG+AGG | 0.473164 | 8_1:+352606 | Msa1170940:CDS |
CATATACCTTGTAGTGCAGC+GGG | 0.476791 | 8_1:-350031 | None:intergenic |
TCTTGCTAGTTTAAAGTACC+TGG | 0.479983 | 8_1:+350729 | Msa1170940:CDS |
CAATAGAATATTTGGTAGAC+AGG | 0.481773 | 8_1:-351550 | None:intergenic |
GCCACAGTCTTCCCGGTACC+TGG | 0.483114 | 8_1:-350147 | None:intergenic |
GAAAGGGGTTAGGTTGGGTC+CGG | 0.486976 | 8_1:-350205 | None:intergenic |
GGAATCTCTCCACCAGGTAC+CGG | 0.488580 | 8_1:+350135 | Msa1170940:CDS |
ATGGGAAATAAGTACCTTGA+GGG | 0.488995 | 8_1:-350246 | None:intergenic |
ATATAGGTTATAATAGAAGT+TGG | 0.489886 | 8_1:+349878 | Msa1170940:five_prime_UTR |
TGGAAGTACATCAAAGGTAT+TGG | 0.492055 | 8_1:+351966 | Msa1170940:CDS |
AACCTCCCGTGATACGATAT+AGG | 0.493803 | 8_1:+349862 | Msa1170940:five_prime_UTR |
TACACTCTCGCTGAAATGAC+TGG | 0.495228 | 8_1:+351946 | Msa1170940:CDS |
AAAAGCAAAACATCCTCAAA+TGG | 0.496652 | 8_1:-352619 | None:intergenic |
AATGAAATCATTGACGGACC+TGG | 0.501089 | 8_1:+349928 | Msa1170940:exon |
CAAGAGCAAAGAAAGGGGTT+AGG | 0.501150 | 8_1:-350215 | None:intergenic |
ACAACACTTACGATAATATG+AGG | 0.502508 | 8_1:-350584 | None:intergenic |
CTCTTGTGCTCTATCCCTCA+AGG | 0.504339 | 8_1:+350232 | Msa1170940:CDS |
TCGCACGCCCTCCTTGAAAC+CGG | 0.504970 | 8_1:+350186 | Msa1170940:CDS |
CCTTTGTGAGCCCAGATGAA+AGG | 0.506008 | 8_1:+352445 | Msa1170940:CDS |
GTTGGGTCCGGTTTCAAGGA+GGG | 0.508277 | 8_1:-350193 | None:intergenic |
AGCAAAGAAAGGGGTTAGGT+TGG | 0.513031 | 8_1:-350211 | None:intergenic |
TAGAGCACAAGAGCAAAGAA+AGG | 0.514945 | 8_1:-350222 | None:intergenic |
GCAAAGAAAGGGGTTAGGTT+GGG | 0.520003 | 8_1:-350210 | None:intergenic |
TGTAGTGACTTCCTTAGTAA+GGG | 0.524452 | 8_1:+352236 | Msa1170940:CDS |
GAGGAGGCACCACGCAGGAG+CGG | 0.529566 | 8_1:+354346 | Msa1170940:CDS |
GGAGACGTTTCATTATGATA+GGG | 0.532303 | 8_1:+352466 | Msa1170940:CDS |
AGAAATGTTCTCCGCTCACT+AGG | 0.532344 | 8_1:-350918 | None:intergenic |
CACCACGCAGGAGCGGAGCT+AGG | 0.537531 | 8_1:+354353 | Msa1170940:CDS |
GAATCTCTCCACCAGGTACC+GGG | 0.538545 | 8_1:+350136 | Msa1170940:CDS |
GTGATCCCCGCTGCACTACA+AGG | 0.544071 | 8_1:+350025 | Msa1170940:CDS |
AGGTTGCTCTGAATTTAGGA+TGG | 0.546593 | 8_1:-350564 | None:intergenic |
GAATATCTAGTCCCTTACTA+AGG | 0.548106 | 8_1:-352247 | None:intergenic |
AGAAGAAATGAAATCATTGA+CGG | 0.548434 | 8_1:+349922 | Msa1170940:exon |
AGAGCACAAGAGCAAAGAAA+GGG | 0.548925 | 8_1:-350221 | None:intergenic |
ATTATATCTACCGCGTGGGA+TGG | 0.549999 | 8_1:+352394 | Msa1170940:CDS |
AAAGAATTGGGTTGGATGAG+CGG | 0.551395 | 8_1:+354307 | Msa1170940:CDS |
GAATGTTCTCATAAGATAGC+AGG | 0.551492 | 8_1:-350863 | None:intergenic |
AGGATACTTAGAAGCGGAGG+AGG | 0.551541 | 8_1:+354330 | Msa1170940:CDS |
ATGAAATCATTGACGGACCT+GGG | 0.552436 | 8_1:+349929 | Msa1170940:CDS |
AATGTGAAACAAGACGGCCT+TGG | 0.552445 | 8_1:+349975 | Msa1170940:CDS |
AAAACATCCTCAAATGGTGC+AGG | 0.552654 | 8_1:-352613 | None:intergenic |
GAGAGCCTATATTTCGAAAG+TGG | 0.553232 | 8_1:-350355 | None:intergenic |
AAAGTGGTCGGCAGTATGAA+AGG | 0.560921 | 8_1:-350339 | None:intergenic |
CATATAACGCATAATAGGAA+TGG | 0.566625 | 8_1:-352055 | None:intergenic |
TTATAACCTATATCGTATCA+CGG | 0.569544 | 8_1:-349868 | None:intergenic |
TTCATCTACATTCACAAAGG+AGG | 0.572067 | 8_1:+350944 | Msa1170940:CDS |
TGATTAACTACGACATTCCT+CGG | 0.574417 | 8_1:+352285 | Msa1170940:CDS |
GGCTGAAAGATTTGCACAAG+AGG | 0.578598 | 8_1:+352660 | Msa1170940:CDS |
TTAATCACCATATCTACCGC+TGG | 0.579180 | 8_1:-352269 | None:intergenic |
GCCTATATTTCGAAAGTGGT+CGG | 0.579222 | 8_1:-350351 | None:intergenic |
GAGACGTTTCATTATGATAG+GGG | 0.581096 | 8_1:+352467 | Msa1170940:CDS |
TATAACCTATATCGTATCAC+GGG | 0.581232 | 8_1:-349867 | None:intergenic |
GGATGGATTCGTGTTCCTTG+CGG | 0.586649 | 8_1:-350547 | None:intergenic |
AAGAGCAAGAGAAAATCCTT+GGG | 0.587885 | 8_1:-350710 | None:intergenic |
AGGAAATGAAAGAATTGGGT+TGG | 0.588644 | 8_1:+354299 | Msa1170940:intron |
GGTTGGGTCCGGTTTCAAGG+AGG | 0.596561 | 8_1:-350194 | None:intergenic |
GTGTTTGGAATCTCTCCACC+AGG | 0.607952 | 8_1:+350129 | Msa1170940:CDS |
CGAAGAAATGTGAAACAAGA+CGG | 0.609442 | 8_1:+349969 | Msa1170940:CDS |
CGGAGGATACTTAGAAGCGG+AGG | 0.610786 | 8_1:+354327 | Msa1170940:CDS |
TTTCAGCGAGAGTGTATACA+AGG | 0.613445 | 8_1:-351939 | None:intergenic |
GTCTACCAAATATTCTATTG+CGG | 0.618966 | 8_1:+351553 | Msa1170940:CDS |
CCAATTCAGAAGATAAGCCC+AGG | 0.624362 | 8_1:-349946 | None:intergenic |
AAGCGGAGGAGGCACCACGC+AGG | 0.625822 | 8_1:+354341 | Msa1170940:CDS |
TCATATACCTTGTAGTGCAG+CGG | 0.631392 | 8_1:-350032 | None:intergenic |
AATGACTGGAAGTACATCAA+AGG | 0.631928 | 8_1:+351960 | Msa1170940:CDS |
CTGTTTAAGGAATCCTGTGA+AGG | 0.632805 | 8_1:+351436 | Msa1170940:CDS |
AAGCCTGCGTGCATACGTCA+GGG | 0.634881 | 8_1:-354388 | None:intergenic |
AACCTAGCTCCGCTCCTGCG+TGG | 0.635060 | 8_1:-354355 | None:intergenic |
GAATTGGGTTGGATGAGCGG+AGG | 0.635111 | 8_1:+354310 | Msa1170940:CDS |
AGACGTTTCATTATGATAGG+GGG | 0.637248 | 8_1:+352468 | Msa1170940:CDS |
CCTTTCATCTGGGCTCACAA+AGG | 0.638109 | 8_1:-352445 | None:intergenic |
TGAAACGTCTCCTTTCATCT+GGG | 0.639210 | 8_1:-352455 | None:intergenic |
ACAGTCTTCCCGGTACCTGG+TGG | 0.642732 | 8_1:-350144 | None:intergenic |
CTTGAATGCGTTCAAGTCTG+GGG | 0.643789 | 8_1:+352196 | Msa1170940:CDS |
CAGGATTATATCTACCGCGT+GGG | 0.647222 | 8_1:+352390 | Msa1170940:intron |
AACTTCATCGCAAAATACCA+AGG | 0.649207 | 8_1:-349992 | None:intergenic |
ACCAGGTACCGGGAAGACTG+TGG | 0.651162 | 8_1:+350146 | Msa1170940:CDS |
CATCTTACGTTTGGATACCG+AGG | 0.656508 | 8_1:-352302 | None:intergenic |
AACCTATATCGTATCACGGG+AGG | 0.657804 | 8_1:-349864 | None:intergenic |
GAGCACAAGAGCAAAGAAAG+GGG | 0.662239 | 8_1:-350220 | None:intergenic |
TACTAAGGAAGTCACTACAA+AGG | 0.670406 | 8_1:-352232 | None:intergenic |
GAGCGGAGGATACTTAGAAG+CGG | 0.670743 | 8_1:+354324 | Msa1170940:CDS |
GAGCCCTGACGTATGCACGC+AGG | 0.673874 | 8_1:+354385 | Msa1170940:exon |
TATCACCTAAAACACACCCA+AGG | 0.682398 | 8_1:+350694 | Msa1170940:CDS |
ACAGGATTATATCTACCGCG+TGG | 0.685772 | 8_1:+352389 | Msa1170940:intron |
GATTGCTCATGAGAACCGCA+AGG | 0.695022 | 8_1:+350532 | Msa1170940:intron |
TCAAATGGTGCAGGATACAG+CGG | 0.698817 | 8_1:-352604 | None:intergenic |
TAAGGGACTAGATATTCCAG+CGG | 0.751272 | 8_1:+352253 | Msa1170940:CDS |
TTGGTATACACTCAGCACTG+TGG | 0.758129 | 8_1:+351985 | Msa1170940:CDS |
GAGCAGCAGTCCATCCCACG+CGG | 0.762919 | 8_1:-352404 | None:intergenic |
ATATACCTTGTAGTGCAGCG+GGG | 0.772467 | 8_1:-350030 | None:intergenic |
TCTTATGAGAACATTCTACG+TGG | 0.795397 | 8_1:+350870 | Msa1170940:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTCTAATTTTTTTTATTTCA+AGG | + | chr8_1:350648-350667 | Msa1170940:intron | 10.0% |
!!! | TATAAATTTTACAATGAAAT+TGG | - | chr8_1:353613-353632 | None:intergenic | 10.0% |
!! | TAATAAATATTTACCATTTA+TGG | + | chr8_1:354135-354154 | Msa1170940:intron | 10.0% |
!!! | AATTTTTTTTATTTCAAGGT+TGG | + | chr8_1:350652-350671 | Msa1170940:intron | 15.0% |
!!! | ATTTTTTTTATTTCAAGGTT+GGG | + | chr8_1:350653-350672 | Msa1170940:intron | 15.0% |
!!! | ATTTTGTAATGATGTAAAAA+CGG | - | chr8_1:350779-350798 | None:intergenic | 15.0% |
!! | GATAATATTTGTAAACATTA+TGG | - | chr8_1:351467-351486 | None:intergenic | 15.0% |
!!! | TTTTTTTTTTCCATTAGTTT+TGG | + | chr8_1:351829-351848 | Msa1170940:intron | 15.0% |
!!! | TTTTTTTTTCCATTAGTTTT+GGG | + | chr8_1:351830-351849 | Msa1170940:intron | 15.0% |
!! | AGAAATTAAAATTAGAATAC+AGG | - | chr8_1:352104-352123 | None:intergenic | 15.0% |
!!! | TGACATAATAACTTTTTTAT+AGG | + | chr8_1:352157-352176 | Msa1170940:intron | 15.0% |
!! | TTAAAAAATAGAATCAAAGT+TGG | - | chr8_1:352834-352853 | None:intergenic | 15.0% |
!!! | TTTTATTTTTTGTGTTTATC+TGG | - | chr8_1:352997-353016 | None:intergenic | 15.0% |
!!! | AGATAATTTTCTTCATAATT+TGG | - | chr8_1:353219-353238 | None:intergenic | 15.0% |
!! | ATATAGGTTATAATAGAAGT+TGG | + | chr8_1:349878-349897 | Msa1170940:five_prime_UTR | 20.0% |
!! | ATGAGATAAATGATTATGAT+GGG | - | chr8_1:350267-350286 | None:intergenic | 20.0% |
!!! | TAACCTTTTTTTCTTAAACT+AGG | + | chr8_1:350309-350328 | Msa1170940:intron | 20.0% |
!!! | AGCATATATATGATTTTTTG+TGG | - | chr8_1:350470-350489 | None:intergenic | 20.0% |
!! | ACAAAAAATCATATATATGC+TGG | + | chr8_1:350469-350488 | Msa1170940:intron | 20.0% |
!! | ATAAAAAAAATTAGAAGCAG+TGG | - | chr8_1:350644-350663 | None:intergenic | 20.0% |
!! | TATTGAATTGCATTTACATT+TGG | + | chr8_1:351073-351092 | Msa1170940:intron | 20.0% |
!! | TATGCAAAAAGAAAATCATA+AGG | + | chr8_1:351598-351617 | Msa1170940:CDS | 20.0% |
!!! | TCTATTTTCTACATCTAAAT+GGG | - | chr8_1:351787-351806 | None:intergenic | 20.0% |
!!! | TTCTATTTTCTACATCTAAA+TGG | - | chr8_1:351788-351807 | None:intergenic | 20.0% |
!! | AAGTTATTATGTCAAGAATT+AGG | - | chr8_1:352151-352170 | None:intergenic | 20.0% |
!!! | TATTTAAAATGGCAAAGTAA+AGG | - | chr8_1:352523-352542 | None:intergenic | 20.0% |
!!! | GACGTTTTTGTTATTTAAAA+TGG | - | chr8_1:352534-352553 | None:intergenic | 20.0% |
!!! | CAAGTATTTTTTTTTTCTTC+AGG | + | chr8_1:352571-352590 | Msa1170940:intron | 20.0% |
!! | CTTAAATATTCTTATATTGC+TGG | - | chr8_1:353342-353361 | None:intergenic | 20.0% |
!!! | GAATGTTGCATATTTTAATT+AGG | - | chr8_1:353546-353565 | None:intergenic | 20.0% |
!!! | TTTTAGTTTTTATTGTTCTC+AGG | - | chr8_1:353698-353717 | None:intergenic | 20.0% |
!! | ACAAAAAGCAGTAAATAAAA+TGG | + | chr8_1:353768-353787 | Msa1170940:intron | 20.0% |
!! | ATCAAACATAACATACATAT+AGG | + | chr8_1:353798-353817 | Msa1170940:intron | 20.0% |
!!! | TTCATATTAGTTTCAAAATG+CGG | - | chr8_1:354032-354051 | None:intergenic | 20.0% |
!! | TGAATTTATTGTATTCTGAA+GGG | + | chr8_1:354075-354094 | Msa1170940:intron | 20.0% |
!! | ATCACTCATCATAATTTAAT+GGG | - | chr8_1:354200-354219 | None:intergenic | 20.0% |
!! | AATCACTCATCATAATTTAA+TGG | - | chr8_1:354201-354220 | None:intergenic | 20.0% |
!!! | TGTTTGTATTTTATTTGTGT+AGG | + | chr8_1:354279-354298 | Msa1170940:intron | 20.0% |
!!! | TTGTCAGCTATTTTATTATT+TGG | + | chr8_1:354479-354498 | Msa1170940:three_prime_UTR | 20.0% |
! | TTATAACCTATATCGTATCA+CGG | - | chr8_1:349871-349890 | None:intergenic | 25.0% |
! | AGAAGAAATGAAATCATTGA+CGG | + | chr8_1:349922-349941 | Msa1170940:exon | 25.0% |
! | TTAATTCAATTTCATTCTGC+AGG | + | chr8_1:350099-350118 | Msa1170940:intron | 25.0% |
! | GATGAGATAAATGATTATGA+TGG | - | chr8_1:350268-350287 | None:intergenic | 25.0% |
! | ACTCCTAGTTTAAGAAAAAA+AGG | - | chr8_1:350315-350334 | None:intergenic | 25.0% |
!!! | GTTTTAGGTGATATAAGATT+AGG | - | chr8_1:350687-350706 | None:intergenic | 25.0% |
!! | TTTTTCATCTACATTCACAA+AGG | + | chr8_1:350941-350960 | Msa1170940:CDS | 25.0% |
! | CTTTGATCTAATAAACTTCT+AGG | + | chr8_1:351208-351227 | Msa1170940:intron | 25.0% |
! | TCATACTCGTTAATCAATAT+CGG | + | chr8_1:351277-351296 | Msa1170940:intron | 25.0% |
!! | AATTTCATTCCTGTGATTTT+AGG | + | chr8_1:351394-351413 | Msa1170940:intron | 25.0% |
!! | GTAAGATATTCAACATTTTC+TGG | - | chr8_1:351641-351660 | None:intergenic | 25.0% |
!!! | TAGAAGTTTTGTTTGATGTT+TGG | + | chr8_1:351679-351698 | Msa1170940:intron | 25.0% |
! | TTATACCAATGAAGACAAAT+TGG | - | chr8_1:352801-352820 | None:intergenic | 25.0% |
!!! | TAGTTCAGAACTGATTTTTT+CGG | - | chr8_1:353171-353190 | None:intergenic | 25.0% |
! | ACAATTGCATACATATAACA+TGG | + | chr8_1:353490-353509 | Msa1170940:intron | 25.0% |
!!! | TTGCATATTTTAATTAGGAC+AGG | - | chr8_1:353541-353560 | None:intergenic | 25.0% |
!!! | TTGTTCTCAGGTTTTTTAAA+TGG | - | chr8_1:353686-353705 | None:intergenic | 25.0% |
!! | TGCTTTATGTTTGATTTCAT+TGG | - | chr8_1:353721-353740 | None:intergenic | 25.0% |
! | ATGAAATCAAACATAAAGCA+AGG | + | chr8_1:353721-353740 | Msa1170940:intron | 25.0% |
!! | TAATGGTTTGTATTTCATGT+TGG | - | chr8_1:353927-353946 | None:intergenic | 25.0% |
! | TTCATTCTTGAGAAATGTAA+TGG | - | chr8_1:353944-353963 | None:intergenic | 25.0% |
!! | TCATATTAGTTTCAAAATGC+GGG | - | chr8_1:354031-354050 | None:intergenic | 25.0% |
!!! | AAAGTGCTTCTTTGAAATTA+TGG | + | chr8_1:354051-354070 | Msa1170940:intron | 25.0% |
!!! | AAGTGCTTCTTTGAAATTAT+GGG | + | chr8_1:354052-354071 | Msa1170940:intron | 25.0% |
! | GTGAATTTATTGTATTCTGA+AGG | + | chr8_1:354074-354093 | Msa1170940:intron | 25.0% |
!! | TATGATGAGTGATTTGAAAT+TGG | + | chr8_1:354207-354226 | Msa1170940:intron | 25.0% |
TATAACCTATATCGTATCAC+GGG | - | chr8_1:349870-349889 | None:intergenic | 30.0% | |
AAAATCATATATATGCTGGC+TGG | + | chr8_1:350473-350492 | Msa1170940:intron | 30.0% | |
ACAACACTTACGATAATATG+AGG | - | chr8_1:350587-350606 | None:intergenic | 30.0% | |
TCAATCAATCAAATCATACC+AGG | - | chr8_1:350750-350769 | None:intergenic | 30.0% | |
!! | AGAAAGTTCTAAAAAGCAGT+TGG | - | chr8_1:351180-351199 | None:intergenic | 30.0% |
! | ATAAACTTCTAGGAACTTCT+TGG | + | chr8_1:351218-351237 | Msa1170940:intron | 30.0% |
! | TAAACTTCTAGGAACTTCTT+GGG | + | chr8_1:351219-351238 | Msa1170940:intron | 30.0% |
! | ATCGGCTATTAATTTGAGAT+CGG | + | chr8_1:351295-351314 | Msa1170940:intron | 30.0% |
AAGTCTACACTTTGTACTAA+TGG | + | chr8_1:351367-351386 | Msa1170940:intron | 30.0% | |
AGTCTACACTTTGTACTAAT+GGG | + | chr8_1:351368-351387 | Msa1170940:intron | 30.0% | |
CAATAGAATATTTGGTAGAC+AGG | - | chr8_1:351553-351572 | None:intergenic | 30.0% | |
GTCTACCAAATATTCTATTG+CGG | + | chr8_1:351553-351572 | Msa1170940:CDS | 30.0% | |
! | ATTCAACATTTTCTGGACAA+GGG | - | chr8_1:351634-351653 | None:intergenic | 30.0% |
! | TATTCAACATTTTCTGGACA+AGG | - | chr8_1:351635-351654 | None:intergenic | 30.0% |
GAATATCTTACTGTTAGAAG+AGG | + | chr8_1:351650-351669 | Msa1170940:intron | 30.0% | |
TTCACAAAACCCAAAACTAA+TGG | - | chr8_1:351842-351861 | None:intergenic | 30.0% | |
GCTTTGATTCTTAAGAATCT+TGG | + | chr8_1:352024-352043 | Msa1170940:CDS | 30.0% | |
CATATAACGCATAATAGGAA+TGG | - | chr8_1:352058-352077 | None:intergenic | 30.0% | |
TGACTCATATAACGCATAAT+AGG | - | chr8_1:352063-352082 | None:intergenic | 30.0% | |
TATTATGCGTTATATGAGTC+AGG | + | chr8_1:352062-352081 | Msa1170940:CDS | 30.0% | |
TTAGGCATATTTCTTGTTGA+CGG | - | chr8_1:352133-352152 | None:intergenic | 30.0% | |
TATATAGCACATCTTACGTT+TGG | - | chr8_1:352314-352333 | None:intergenic | 30.0% | |
ATATAATCCTGTAGATCACA+CGG | - | chr8_1:352381-352400 | None:intergenic | 30.0% | |
AAAAGCAAAACATCCTCAAA+TGG | - | chr8_1:352622-352641 | None:intergenic | 30.0% | |
! | ATTTGAGGATGTTTTGCTTT+TGG | + | chr8_1:352621-352640 | Msa1170940:CDS | 30.0% |
ATTGAGCATAGTTATGCTTT+AGG | + | chr8_1:352694-352713 | Msa1170940:intron | 30.0% | |
!!! | TAAGTAGAGAAGCTAGTTTT+TGG | + | chr8_1:352749-352768 | Msa1170940:intron | 30.0% |
!! | TTTTGTGCAAGTTGAAATTG+TGG | + | chr8_1:352773-352792 | Msa1170940:intron | 30.0% |
! | AGCAAAAACAGTTTGTTTGA+AGG | + | chr8_1:352882-352901 | Msa1170940:intron | 30.0% |
!!! | TGCAACATATCAGTTTTGTT+CGG | - | chr8_1:353063-353082 | None:intergenic | 30.0% |
! | GAGTGTTTTTCTGCATAATT+CGG | - | chr8_1:353252-353271 | None:intergenic | 30.0% |
! | AAATGTACTAGTTTGGTTGT+TGG | - | chr8_1:353305-353324 | None:intergenic | 30.0% |
AGGGTTTAAATGTACTAGTT+TGG | - | chr8_1:353312-353331 | None:intergenic | 30.0% | |
TTATATTGCTGGTGCATATA+GGG | - | chr8_1:353331-353350 | None:intergenic | 30.0% | |
AAAGCTGACTATATGTGAAA+AGG | - | chr8_1:353433-353452 | None:intergenic | 30.0% | |
!!! | TCTTATTTTACTGCAATAGC+TGG | - | chr8_1:353470-353489 | None:intergenic | 30.0% |
! | TTTATGATTTGTAGTCTGGT+TGG | - | chr8_1:353655-353674 | None:intergenic | 30.0% |
! | TTGCTTTATGATTTGTAGTC+TGG | - | chr8_1:353659-353678 | None:intergenic | 30.0% |
ATACATATAGGTTCGAAAGT+TGG | + | chr8_1:353810-353829 | Msa1170940:intron | 30.0% | |
! | CATATTAGTTTCAAAATGCG+GGG | - | chr8_1:354030-354049 | None:intergenic | 30.0% |
CATGTTAAGGATTCCATAAA+TGG | - | chr8_1:354151-354170 | None:intergenic | 30.0% | |
TGTGTAGGAAATGAAAGAAT+TGG | + | chr8_1:354294-354313 | Msa1170940:intron | 30.0% | |
GTGTAGGAAATGAAAGAATT+GGG | + | chr8_1:354295-354314 | Msa1170940:intron | 30.0% | |
TTGGAGTCATTCGTTGAATT+AGG | + | chr8_1:349897-349916 | Msa1170940:five_prime_UTR | 35.0% | |
CGAAGAAATGTGAAACAAGA+CGG | + | chr8_1:349969-349988 | Msa1170940:CDS | 35.0% | |
AACTTCATCGCAAAATACCA+AGG | - | chr8_1:349995-350014 | None:intergenic | 35.0% | |
ATGGGAAATAAGTACCTTGA+GGG | - | chr8_1:350249-350268 | None:intergenic | 35.0% | |
! | TATGAGGTTGCTCTGAATTT+AGG | - | chr8_1:350571-350590 | None:intergenic | 35.0% |
AGGTGATATAAGATTAGGTC+AGG | - | chr8_1:350682-350701 | None:intergenic | 35.0% | |
! | AAAATCCTTGGGTGTGTTTT+AGG | - | chr8_1:350702-350721 | None:intergenic | 35.0% |
AAGAGCAAGAGAAAATCCTT+GGG | - | chr8_1:350713-350732 | None:intergenic | 35.0% | |
! | TCTTGCTAGTTTAAAGTACC+TGG | + | chr8_1:350729-350748 | Msa1170940:CDS | 35.0% |
GAATGTTCTCATAAGATAGC+AGG | - | chr8_1:350866-350885 | None:intergenic | 35.0% | |
TCTTATGAGAACATTCTACG+TGG | + | chr8_1:350870-350889 | Msa1170940:CDS | 35.0% | |
CAAAAATGATTCCTAGTGAG+CGG | + | chr8_1:350907-350926 | Msa1170940:CDS | 35.0% | |
TTCATCTACATTCACAAAGG+AGG | + | chr8_1:350944-350963 | Msa1170940:CDS | 35.0% | |
CACAAAGGAGGTAAATATGT+AGG | + | chr8_1:350956-350975 | Msa1170940:intron | 35.0% | |
!! | GGTTTGAACATTTAGCTCTA+AGG | - | chr8_1:351118-351137 | None:intergenic | 35.0% |
! | CGTGTGTTACAATTGTGTTT+TGG | - | chr8_1:351139-351158 | None:intergenic | 35.0% |
! | GCTATTAATTTGAGATCGGA+CGG | + | chr8_1:351299-351318 | Msa1170940:intron | 35.0% |
GTCTACACTTTGTACTAATG+GGG | + | chr8_1:351369-351388 | Msa1170940:intron | 35.0% | |
TGTGTCCGCAATAGAATATT+TGG | - | chr8_1:351561-351580 | None:intergenic | 35.0% | |
AGACATGGAATTGATGAACA+CGG | - | chr8_1:351904-351923 | None:intergenic | 35.0% | |
ATCAATTCCATGTCTTGCAT+AGG | + | chr8_1:351909-351928 | Msa1170940:intron | 35.0% | |
! | AATGACTGGAAGTACATCAA+AGG | + | chr8_1:351960-351979 | Msa1170940:CDS | 35.0% |
! | TGGAAGTACATCAAAGGTAT+TGG | + | chr8_1:351966-351985 | Msa1170940:CDS | 35.0% |
TACTAAGGAAGTCACTACAA+AGG | - | chr8_1:352235-352254 | None:intergenic | 35.0% | |
TTGTAGTGACTTCCTTAGTA+AGG | + | chr8_1:352235-352254 | Msa1170940:CDS | 35.0% | |
TGTAGTGACTTCCTTAGTAA+GGG | + | chr8_1:352236-352255 | Msa1170940:CDS | 35.0% | |
GAATATCTAGTCCCTTACTA+AGG | - | chr8_1:352250-352269 | None:intergenic | 35.0% | |
TGATTAACTACGACATTCCT+CGG | + | chr8_1:352285-352304 | Msa1170940:CDS | 35.0% | |
AGGAGACGTTTCATTATGAT+AGG | + | chr8_1:352465-352484 | Msa1170940:CDS | 35.0% | |
GGAGACGTTTCATTATGATA+GGG | + | chr8_1:352466-352485 | Msa1170940:CDS | 35.0% | |
GAGACGTTTCATTATGATAG+GGG | + | chr8_1:352467-352486 | Msa1170940:CDS | 35.0% | |
AGACGTTTCATTATGATAGG+GGG | + | chr8_1:352468-352487 | Msa1170940:CDS | 35.0% | |
ATTATGATAGGGGGACATAT+AGG | + | chr8_1:352477-352496 | Msa1170940:CDS | 35.0% | |
!! | AGGATGTTTTGCTTTTGGAA+GGG | + | chr8_1:352626-352645 | Msa1170940:CDS | 35.0% |
!! | TTTTTCAGTATAGGTGGTTG+TGG | - | chr8_1:352947-352966 | None:intergenic | 35.0% |
!!! | TCTTGCTGGTTTTTCAGTAT+AGG | - | chr8_1:352956-352975 | None:intergenic | 35.0% |
ATAAGAATAATTGCACCCCT+GGG | - | chr8_1:353113-353132 | None:intergenic | 35.0% | |
!!! | AGAACTGATTTTTTCGGCTT+GGG | - | chr8_1:353165-353184 | None:intergenic | 35.0% |
! | TTTTCTGCATAATTCGGAGA+TGG | - | chr8_1:353246-353265 | None:intergenic | 35.0% |
CTTATATTGCTGGTGCATAT+AGG | - | chr8_1:353332-353351 | None:intergenic | 35.0% | |
TGTTGCAATTACTCTTGCAT+GGG | - | chr8_1:353395-353414 | None:intergenic | 35.0% | |
TTGTTGCAATTACTCTTGCA+TGG | - | chr8_1:353396-353415 | None:intergenic | 35.0% | |
TCCTCAACATCAAAATGACT+TGG | + | chr8_1:353566-353585 | Msa1170940:intron | 35.0% | |
!! | ACCAAGTCATTTTGATGTTG+AGG | - | chr8_1:353570-353589 | None:intergenic | 35.0% |
!! | TTTGCAGGTTTGATTTGAAG+AGG | - | chr8_1:353876-353895 | None:intergenic | 35.0% |
!! | TGGCTATTGATTTGATTTGC+AGG | - | chr8_1:353891-353910 | None:intergenic | 35.0% |
! | ATGTTGGCTGCTTATTTGAT+TGG | - | chr8_1:353911-353930 | None:intergenic | 35.0% |
AGGAAATGAAAGAATTGGGT+TGG | + | chr8_1:354299-354318 | Msa1170940:intron | 35.0% | |
! | AATGAAATCATTGACGGACC+TGG | + | chr8_1:349928-349947 | Msa1170940:exon | 40.0% |
! | ATGAAATCATTGACGGACCT+GGG | + | chr8_1:349929-349948 | Msa1170940:CDS | 40.0% |
TCATATACCTTGTAGTGCAG+CGG | - | chr8_1:350035-350054 | None:intergenic | 40.0% | |
TCTGCAGGAAATGATGTGTT+TGG | + | chr8_1:350114-350133 | Msa1170940:intron | 40.0% | |
AGAGCACAAGAGCAAAGAAA+GGG | - | chr8_1:350224-350243 | None:intergenic | 40.0% | |
TAGAGCACAAGAGCAAAGAA+AGG | - | chr8_1:350225-350244 | None:intergenic | 40.0% | |
GATGGGAAATAAGTACCTTG+AGG | - | chr8_1:350250-350269 | None:intergenic | 40.0% | |
GCCTATATTTCGAAAGTGGT+CGG | - | chr8_1:350354-350373 | None:intergenic | 40.0% | |
GAGAGCCTATATTTCGAAAG+TGG | - | chr8_1:350358-350377 | None:intergenic | 40.0% | |
CGAAATATAGGCTCTCAGTT+TGG | + | chr8_1:350362-350381 | Msa1170940:CDS | 40.0% | |
! | AGGTTGCTCTGAATTTAGGA+TGG | - | chr8_1:350567-350586 | None:intergenic | 40.0% |
TATCACCTAAAACACACCCA+AGG | + | chr8_1:350694-350713 | Msa1170940:CDS | 40.0% | |
CAAGAGCAAGAGAAAATCCT+TGG | - | chr8_1:350714-350733 | None:intergenic | 40.0% | |
! | TCGTATCGACCTAAAATCAC+AGG | - | chr8_1:351406-351425 | None:intergenic | 40.0% |
CTGTTTAAGGAATCCTGTGA+AGG | + | chr8_1:351436-351455 | Msa1170940:CDS | 40.0% | |
CATTATGGTTGTACCTTCAC+AGG | - | chr8_1:351452-351471 | None:intergenic | 40.0% | |
GTGAATAACATGAGTCAAGC+AGG | - | chr8_1:351499-351518 | None:intergenic | 40.0% | |
ACATCTACATAGGCAACACT+TGG | - | chr8_1:351756-351775 | None:intergenic | 40.0% | |
GGCATCATCTACATCTACAT+AGG | - | chr8_1:351766-351785 | None:intergenic | 40.0% | |
TAGCAATCCTATGCAAGACA+TGG | - | chr8_1:351919-351938 | None:intergenic | 40.0% | |
! | TTTCAGCGAGAGTGTATACA+AGG | - | chr8_1:351942-351961 | None:intergenic | 40.0% |
ATATGAGTCAGGTGACTGTA+CGG | + | chr8_1:352073-352092 | Msa1170940:intron | 40.0% | |
TAAGGGACTAGATATTCCAG+CGG | + | chr8_1:352253-352272 | Msa1170940:CDS | 40.0% | |
AGATATTCCAGCGGTAGATA+TGG | + | chr8_1:352262-352281 | Msa1170940:CDS | 40.0% | |
TTAATCACCATATCTACCGC+TGG | - | chr8_1:352272-352291 | None:intergenic | 40.0% | |
GGTCAGGACTATACTAAAAC+GGG | - | chr8_1:352360-352379 | None:intergenic | 40.0% | |
CGGTCAGGACTATACTAAAA+CGG | - | chr8_1:352361-352380 | None:intergenic | 40.0% | |
TGAAACGTCTCCTTTCATCT+GGG | - | chr8_1:352458-352477 | None:intergenic | 40.0% | |
ATGAAACGTCTCCTTTCATC+TGG | - | chr8_1:352459-352478 | None:intergenic | 40.0% | |
AAAACATCCTCAAATGGTGC+AGG | - | chr8_1:352616-352635 | None:intergenic | 40.0% | |
!! | GAGGATGTTTTGCTTTTGGA+AGG | + | chr8_1:352625-352644 | Msa1170940:CDS | 40.0% |
!! | TTTGGAAGGGCTTGTTATTG+AGG | + | chr8_1:352639-352658 | Msa1170940:CDS | 40.0% |
! | TGGTGCCAATTTGTCTTCAT+TGG | + | chr8_1:352793-352812 | Msa1170940:intron | 40.0% |
!!! | TGCTGGTTTTTCAGTATAGG+TGG | - | chr8_1:352953-352972 | None:intergenic | 40.0% |
TATCTGGCTGTTTGTATCGT+TGG | - | chr8_1:352981-353000 | None:intergenic | 40.0% | |
TATGTTGCAGCTGAAAGACA+CGG | + | chr8_1:353074-353093 | Msa1170940:intron | 40.0% | |
CATAAGAATAATTGCACCCC+TGG | - | chr8_1:353114-353133 | None:intergenic | 40.0% | |
!! | GAATGTTTGTTGTACAGCAG+TGG | - | chr8_1:353142-353161 | None:intergenic | 40.0% |
!!! | GAACTGATTTTTTCGGCTTG+GGG | - | chr8_1:353164-353183 | None:intergenic | 40.0% |
!!! | CAGAACTGATTTTTTCGGCT+TGG | - | chr8_1:353166-353185 | None:intergenic | 40.0% |
!! | ACATCAAAATGACTTGGTCG+TGG | + | chr8_1:353572-353591 | Msa1170940:intron | 40.0% |
!! | AAATGACTTGGTCGTGGTTT+AGG | + | chr8_1:353578-353597 | Msa1170940:intron | 40.0% |
!! | AATGACTTGGTCGTGGTTTA+GGG | + | chr8_1:353579-353598 | Msa1170940:intron | 40.0% |
AATCCTTAACATGTGCGCTA+AGG | + | chr8_1:354158-354177 | Msa1170940:intron | 40.0% | |
ATCCTTAACATGTGCGCTAA+GGG | + | chr8_1:354159-354178 | Msa1170940:intron | 40.0% | |
!! | AAAGAATTGGGTTGGATGAG+CGG | + | chr8_1:354307-354326 | Msa1170940:CDS | 40.0% |
!! | ACGCAGGCTTTAGTATTGAT+TGG | + | chr8_1:354401-354420 | Msa1170940:three_prime_UTR | 40.0% |
AACCTCCCGTGATACGATAT+AGG | + | chr8_1:349862-349881 | Msa1170940:five_prime_UTR | 45.0% | |
AACCTATATCGTATCACGGG+AGG | - | chr8_1:349867-349886 | None:intergenic | 45.0% | |
CCAATTCAGAAGATAAGCCC+AGG | - | chr8_1:349949-349968 | None:intergenic | 45.0% | |
CCTGGGCTTATCTTCTGAAT+TGG | + | chr8_1:349946-349965 | Msa1170940:CDS | 45.0% | |
AATGTGAAACAAGACGGCCT+TGG | + | chr8_1:349975-349994 | Msa1170940:CDS | 45.0% | |
ATATACCTTGTAGTGCAGCG+GGG | - | chr8_1:350033-350052 | None:intergenic | 45.0% | |
CATATACCTTGTAGTGCAGC+GGG | - | chr8_1:350034-350053 | None:intergenic | 45.0% | |
AACAAAAGCCACAGTCTTCC+CGG | - | chr8_1:350157-350176 | None:intergenic | 45.0% | |
GCAAAGAAAGGGGTTAGGTT+GGG | - | chr8_1:350213-350232 | None:intergenic | 45.0% | |
AGCAAAGAAAGGGGTTAGGT+TGG | - | chr8_1:350214-350233 | None:intergenic | 45.0% | |
CAAGAGCAAAGAAAGGGGTT+AGG | - | chr8_1:350218-350237 | None:intergenic | 45.0% | |
GAGCACAAGAGCAAAGAAAG+GGG | - | chr8_1:350223-350242 | None:intergenic | 45.0% | |
AAAGTGGTCGGCAGTATGAA+AGG | - | chr8_1:350342-350361 | None:intergenic | 45.0% | |
GCCGACCACTTTCGAAATAT+AGG | + | chr8_1:350350-350369 | Msa1170940:CDS | 45.0% | |
AGAAATGTTCTCCGCTCACT+AGG | - | chr8_1:350921-350940 | None:intergenic | 45.0% | |
CGATGCTAAGCGTCTGTTTA+AGG | + | chr8_1:351423-351442 | Msa1170940:CDS | 45.0% | |
CACTTGGCAAACAGGCAAAA+TGG | - | chr8_1:351740-351759 | None:intergenic | 45.0% | |
ATAGGCAACACTTGGCAAAC+AGG | - | chr8_1:351748-351767 | None:intergenic | 45.0% | |
TACACTCTCGCTGAAATGAC+TGG | + | chr8_1:351946-351965 | Msa1170940:CDS | 45.0% | |
TTGGTATACACTCAGCACTG+TGG | + | chr8_1:351985-352004 | Msa1170940:CDS | 45.0% | |
CTGTGGTAAAACGCTTCTTC+TGG | + | chr8_1:352002-352021 | Msa1170940:CDS | 45.0% | |
TCCTTGAATGCGTTCAAGTC+TGG | + | chr8_1:352194-352213 | Msa1170940:CDS | 45.0% | |
CCTTGAATGCGTTCAAGTCT+GGG | + | chr8_1:352195-352214 | Msa1170940:CDS | 45.0% | |
CTTGAATGCGTTCAAGTCTG+GGG | + | chr8_1:352196-352215 | Msa1170940:CDS | 45.0% | |
CATCTTACGTTTGGATACCG+AGG | - | chr8_1:352305-352324 | None:intergenic | 45.0% | |
ACAGGATTATATCTACCGCG+TGG | + | chr8_1:352389-352408 | Msa1170940:intron | 45.0% | |
CAGGATTATATCTACCGCGT+GGG | + | chr8_1:352390-352409 | Msa1170940:intron | 45.0% | |
ATTATATCTACCGCGTGGGA+TGG | + | chr8_1:352394-352413 | Msa1170940:CDS | 45.0% | |
ATCTGGGCTCACAAAGGAAA+TGG | - | chr8_1:352442-352461 | None:intergenic | 45.0% | |
GATAGGGGGACATATAGGTT+AGG | + | chr8_1:352482-352501 | Msa1170940:intron | 45.0% | |
TCAAATGGTGCAGGATACAG+CGG | - | chr8_1:352607-352626 | None:intergenic | 45.0% | |
GGCTGAAAGATTTGCACAAG+AGG | + | chr8_1:352660-352679 | Msa1170940:CDS | 45.0% | |
AGTATAGGTGGTTGTGGTTG+TGG | - | chr8_1:352941-352960 | None:intergenic | 45.0% | |
! | TTGTATCGTTGGTCTCTTGC+TGG | - | chr8_1:352970-352989 | None:intergenic | 45.0% |
! | GGTTCTTTGCTTTGATTCGC+GGG | - | chr8_1:353042-353061 | None:intergenic | 45.0% |
! | CGGTTCTTTGCTTTGATTCG+CGG | - | chr8_1:353043-353062 | None:intergenic | 45.0% |
! | CATAATTTGGAGCGTGTTCG+AGG | - | chr8_1:353206-353225 | None:intergenic | 45.0% |
! | CAGGTACTGCAACTGAACTA+AGG | - | chr8_1:353522-353541 | None:intergenic | 45.0% |
! | GTGTTTGGAATCTCTCCACC+AGG | + | chr8_1:350129-350148 | Msa1170940:CDS | 50.0% |
!! | TTAGGTTGGGTCCGGTTTCA+AGG | - | chr8_1:350200-350219 | None:intergenic | 50.0% |
CTCTTGTGCTCTATCCCTCA+AGG | + | chr8_1:350232-350251 | Msa1170940:CDS | 50.0% | |
GATTGCTCATGAGAACCGCA+AGG | + | chr8_1:350532-350551 | Msa1170940:intron | 50.0% | |
! | GGATGGATTCGTGTTCCTTG+CGG | - | chr8_1:350550-350569 | None:intergenic | 50.0% |
CCCAGACTTGAACGCATTCA+AGG | - | chr8_1:352198-352217 | None:intergenic | 50.0% | |
ATCCTGTAGATCACACGGTC+AGG | - | chr8_1:352376-352395 | None:intergenic | 50.0% | |
CCTTTCATCTGGGCTCACAA+AGG | - | chr8_1:352448-352467 | None:intergenic | 50.0% | |
CCTTTGTGAGCCCAGATGAA+AGG | + | chr8_1:352445-352464 | Msa1170940:CDS | 50.0% | |
GCTGTATCCTGCACCATTTG+AGG | + | chr8_1:352606-352625 | Msa1170940:CDS | 50.0% | |
! | GGTGGTTGTGGTTGTGGTTT+TGG | - | chr8_1:352935-352954 | None:intergenic | 50.0% |
TGCCCTTAGCGCACATGTTA+AGG | - | chr8_1:354164-354183 | None:intergenic | 50.0% | |
GAGCGGAGGATACTTAGAAG+CGG | + | chr8_1:354324-354343 | Msa1170940:CDS | 50.0% | |
AGGATACTTAGAAGCGGAGG+AGG | + | chr8_1:354330-354349 | Msa1170940:CDS | 50.0% | |
GGAATCTCTCCACCAGGTAC+CGG | + | chr8_1:350135-350154 | Msa1170940:CDS | 55.0% | |
GAATCTCTCCACCAGGTACC+GGG | + | chr8_1:350136-350155 | Msa1170940:CDS | 55.0% | |
! | TCAAGGAGGGCGTGCGATAT+AGG | - | chr8_1:350183-350202 | None:intergenic | 55.0% |
GTTGGGTCCGGTTTCAAGGA+GGG | - | chr8_1:350196-350215 | None:intergenic | 55.0% | |
!! | GAAAGGGGTTAGGTTGGGTC+CGG | - | chr8_1:350208-350227 | None:intergenic | 55.0% |
ACTTTCACTGCTCTGCTCGC+AGG | + | chr8_1:350824-350843 | Msa1170940:intron | 55.0% | |
GTCCTGACCGTGTGATCTAC+AGG | + | chr8_1:352371-352390 | Msa1170940:intron | 55.0% | |
GCAGCTGAAAGACACGGAGA+TGG | + | chr8_1:353080-353099 | Msa1170940:intron | 55.0% | |
ACGGAGATGGATCAGAACCC+AGG | + | chr8_1:353093-353112 | Msa1170940:intron | 55.0% | |
CGGAGATGGATCAGAACCCA+GGG | + | chr8_1:353094-353113 | Msa1170940:intron | 55.0% | |
GGAGATGGATCAGAACCCAG+GGG | + | chr8_1:353095-353114 | Msa1170940:intron | 55.0% | |
!! | GAATTGGGTTGGATGAGCGG+AGG | + | chr8_1:354310-354329 | Msa1170940:CDS | 55.0% |
CGGAGGATACTTAGAAGCGG+AGG | + | chr8_1:354327-354346 | Msa1170940:CDS | 55.0% | |
AAGCCTGCGTGCATACGTCA+GGG | - | chr8_1:354391-354410 | None:intergenic | 55.0% | |
AAAGCCTGCGTGCATACGTC+AGG | - | chr8_1:354392-354411 | None:intergenic | 55.0% | |
GTGATCCCCGCTGCACTACA+AGG | + | chr8_1:350025-350044 | Msa1170940:CDS | 60.0% | |
ACAGTCTTCCCGGTACCTGG+TGG | - | chr8_1:350147-350166 | None:intergenic | 60.0% | |
!! | ACCAGGTACCGGGAAGACTG+TGG | + | chr8_1:350146-350165 | Msa1170940:CDS | 60.0% |
TCGCACGCCCTCCTTGAAAC+CGG | + | chr8_1:350186-350205 | Msa1170940:CDS | 60.0% | |
GGTTGGGTCCGGTTTCAAGG+AGG | - | chr8_1:350197-350216 | None:intergenic | 60.0% | |
GAGTCAGGTGACTGTACGGC+AGG | + | chr8_1:352077-352096 | Msa1170940:intron | 60.0% | |
GCCACAGTCTTCCCGGTACC+TGG | - | chr8_1:350150-350169 | None:intergenic | 65.0% | |
GAGCAGCAGTCCATCCCACG+CGG | - | chr8_1:352407-352426 | None:intergenic | 65.0% | |
AACCTAGCTCCGCTCCTGCG+TGG | - | chr8_1:354358-354377 | None:intergenic | 65.0% | |
GAGCCCTGACGTATGCACGC+AGG | + | chr8_1:354385-354404 | Msa1170940:exon | 65.0% | |
!! | AAGCGGAGGAGGCACCACGC+AGG | + | chr8_1:354341-354360 | Msa1170940:CDS | 70.0% |
!! | GAGGAGGCACCACGCAGGAG+CGG | + | chr8_1:354346-354365 | Msa1170940:CDS | 70.0% |
CACCACGCAGGAGCGGAGCT+AGG | + | chr8_1:354353-354372 | Msa1170940:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 349859 | 354557 | 349859 | ID=Msa1170940;Name=Msa1170940 |
chr8_1 | mRNA | 349859 | 354557 | 349859 | ID=Msa1170940-mRNA-1;Parent=Msa1170940;Name=Msa1170940-mRNA-1;_AED=0.12;_eAED=0.12;_QI=70|1|1|1|0.91|1|13|164|426 |
chr8_1 | exon | 349859 | 350046 | 349859 | ID=Msa1170940-mRNA-1:exon:78;Parent=Msa1170940-mRNA-1 |
chr8_1 | exon | 350121 | 350253 | 350121 | ID=Msa1170940-mRNA-1:exon:79;Parent=Msa1170940-mRNA-1 |
chr8_1 | exon | 350331 | 350400 | 350331 | ID=Msa1170940-mRNA-1:exon:80;Parent=Msa1170940-mRNA-1 |
chr8_1 | exon | 350533 | 350595 | 350533 | ID=Msa1170940-mRNA-1:exon:81;Parent=Msa1170940-mRNA-1 |
chr8_1 | exon | 350670 | 350750 | 350670 | ID=Msa1170940-mRNA-1:exon:82;Parent=Msa1170940-mRNA-1 |
chr8_1 | exon | 350846 | 350965 | 350846 | ID=Msa1170940-mRNA-1:exon:83;Parent=Msa1170940-mRNA-1 |
chr8_1 | exon | 351416 | 351457 | 351416 | ID=Msa1170940-mRNA-1:exon:84;Parent=Msa1170940-mRNA-1 |
chr8_1 | exon | 351545 | 351619 | 351545 | ID=Msa1170940-mRNA-1:exon:85;Parent=Msa1170940-mRNA-1 |
chr8_1 | exon | 351931 | 352083 | 351931 | ID=Msa1170940-mRNA-1:exon:86;Parent=Msa1170940-mRNA-1 |
chr8_1 | exon | 352179 | 352316 | 352179 | ID=Msa1170940-mRNA-1:exon:87;Parent=Msa1170940-mRNA-1 |
chr8_1 | exon | 352393 | 352498 | 352393 | ID=Msa1170940-mRNA-1:exon:88;Parent=Msa1170940-mRNA-1 |
chr8_1 | exon | 352593 | 352681 | 352593 | ID=Msa1170940-mRNA-1:exon:89;Parent=Msa1170940-mRNA-1 |
chr8_1 | exon | 354301 | 354557 | 354301 | ID=Msa1170940-mRNA-1:exon:90;Parent=Msa1170940-mRNA-1 |
chr8_1 | five_prime_UTR | 349859 | 349928 | 349859 | ID=Msa1170940-mRNA-1:five_prime_utr;Parent=Msa1170940-mRNA-1 |
chr8_1 | CDS | 349929 | 350046 | 349929 | ID=Msa1170940-mRNA-1:cds;Parent=Msa1170940-mRNA-1 |
chr8_1 | CDS | 350121 | 350253 | 350121 | ID=Msa1170940-mRNA-1:cds;Parent=Msa1170940-mRNA-1 |
chr8_1 | CDS | 350331 | 350400 | 350331 | ID=Msa1170940-mRNA-1:cds;Parent=Msa1170940-mRNA-1 |
chr8_1 | CDS | 350533 | 350595 | 350533 | ID=Msa1170940-mRNA-1:cds;Parent=Msa1170940-mRNA-1 |
chr8_1 | CDS | 350670 | 350750 | 350670 | ID=Msa1170940-mRNA-1:cds;Parent=Msa1170940-mRNA-1 |
chr8_1 | CDS | 350846 | 350965 | 350846 | ID=Msa1170940-mRNA-1:cds;Parent=Msa1170940-mRNA-1 |
chr8_1 | CDS | 351416 | 351457 | 351416 | ID=Msa1170940-mRNA-1:cds;Parent=Msa1170940-mRNA-1 |
chr8_1 | CDS | 351545 | 351619 | 351545 | ID=Msa1170940-mRNA-1:cds;Parent=Msa1170940-mRNA-1 |
chr8_1 | CDS | 351931 | 352083 | 351931 | ID=Msa1170940-mRNA-1:cds;Parent=Msa1170940-mRNA-1 |
chr8_1 | CDS | 352179 | 352316 | 352179 | ID=Msa1170940-mRNA-1:cds;Parent=Msa1170940-mRNA-1 |
chr8_1 | CDS | 352393 | 352498 | 352393 | ID=Msa1170940-mRNA-1:cds;Parent=Msa1170940-mRNA-1 |
chr8_1 | CDS | 352593 | 352681 | 352593 | ID=Msa1170940-mRNA-1:cds;Parent=Msa1170940-mRNA-1 |
chr8_1 | CDS | 354301 | 354393 | 354301 | ID=Msa1170940-mRNA-1:cds;Parent=Msa1170940-mRNA-1 |
chr8_1 | three_prime_UTR | 354394 | 354557 | 354394 | ID=Msa1170940-mRNA-1:three_prime_utr;Parent=Msa1170940-mRNA-1 |
Gene Sequence |
Protein sequence |