Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388930 | XP_003620624.1 | 97.394 | 307 | 8 | 0 | 1 | 307 | 1 | 307 | 0.0 | 618 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388930 | G7KPF3 | 97.394 | 307 | 8 | 0 | 1 | 307 | 1 | 307 | 0.0 | 618 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa1388930 | 0.800948 | 1.134106e-48 | -8.615850e-47 |
| Msa0006110 | Msa1388930 | 0.812917 | 3.330545e-51 | -8.615850e-47 |
| Msa0009180 | Msa1388930 | 0.806059 | 9.887188e-50 | -8.615850e-47 |
| Msa0015390 | Msa1388930 | 0.807776 | 4.285192e-50 | -8.615850e-47 |
| Msa0018650 | Msa1388930 | 0.800729 | 1.257108e-48 | -8.615850e-47 |
| Msa0019580 | Msa1388930 | 0.807395 | 5.161674e-50 | -8.615850e-47 |
| Msa0026910 | Msa1388930 | 0.801866 | 7.354918e-49 | -8.615850e-47 |
| Msa0036140 | Msa1388930 | 0.800849 | 1.188438e-48 | -8.615850e-47 |
| Msa0044000 | Msa1388930 | 0.806478 | 8.067067e-50 | -8.615850e-47 |
| Msa0044090 | Msa1388930 | 0.809372 | 1.955338e-50 | -8.615850e-47 |
| Msa0047110 | Msa1388930 | 0.806748 | 7.076598e-50 | -8.615850e-47 |
| Msa0079070 | Msa1388930 | 0.821824 | 3.287723e-53 | -8.615850e-47 |
| Msa0079130 | Msa1388930 | 0.820553 | 6.453950e-53 | -8.615850e-47 |
| Msa0080090 | Msa1388930 | 0.803965 | 2.710373e-49 | -8.615850e-47 |
| Msa0084380 | Msa1388930 | 0.800687 | 1.282522e-48 | -8.615850e-47 |
| Msa0095560 | Msa1388930 | 0.809593 | 1.752403e-50 | -8.615850e-47 |
| Msa0099210 | Msa1388930 | 0.804303 | 2.304751e-49 | -8.615850e-47 |
| Msa0103770 | Msa1388930 | 0.801633 | 8.212547e-49 | -8.615850e-47 |
| Msa0105070 | Msa1388930 | 0.807819 | 4.195831e-50 | -8.615850e-47 |
| Msa1353470 | Msa1388930 | 0.818597 | 1.803553e-52 | -8.615850e-47 |
| Msa1360060 | Msa1388930 | 0.801006 | 1.103611e-48 | -8.615850e-47 |
| Msa1372760 | Msa1388930 | 0.837149 | 6.161794e-57 | -8.615850e-47 |
| Msa1373030 | Msa1388930 | 0.819452 | 1.153043e-52 | -8.615850e-47 |
| Msa1382400 | Msa1388930 | 0.806244 | 9.037431e-50 | -8.615850e-47 |
| Msa1385000 | Msa1388930 | 0.802238 | 6.168635e-49 | -8.615850e-47 |
| Msa1388510 | Msa1388930 | 0.800327 | 1.517972e-48 | -8.615850e-47 |
| Msa1388930 | Msa1388970 | 0.811228 | 7.777553e-51 | -8.615850e-47 |
| Msa1388930 | Msa1392240 | 0.805074 | 1.590796e-49 | -8.615850e-47 |
| Msa1388930 | Msa1392260 | 0.804211 | 2.408120e-49 | -8.615850e-47 |
| Msa1388930 | Msa1397740 | 0.832016 | 1.202408e-55 | -8.615850e-47 |
| Msa1388930 | Msa1410680 | 0.808722 | 2.692995e-50 | -8.615850e-47 |
| Msa1388930 | Msa1411020 | 0.802836 | 4.643524e-49 | -8.615850e-47 |
| Msa1388930 | Msa1419960 | 0.810762 | 9.810300e-51 | -8.615850e-47 |
| Msa1388930 | Msa1424290 | 0.803330 | 3.670616e-49 | -8.615850e-47 |
| Msa1388930 | Msa1427230 | 0.814983 | 1.166910e-51 | -8.615850e-47 |
| Msa1388930 | Msa1434350 | 0.802085 | 6.630420e-49 | -8.615850e-47 |
| Msa1388930 | Msa1435270 | 0.836158 | 1.102349e-56 | -8.615850e-47 |
| Msa1388930 | Msa1439320 | 0.804679 | 1.924320e-49 | -8.615850e-47 |
| Msa1388930 | Msa1440560 | 0.811658 | 6.269581e-51 | -8.615850e-47 |
| Msa1388930 | Msa1448640 | 0.827813 | 1.271627e-54 | -8.615850e-47 |
| Msa1388930 | Msa1451570 | 0.807616 | 4.633466e-50 | -8.615850e-47 |
| Msa1388930 | Msa1453320 | 0.814598 | 1.419756e-51 | -8.615850e-47 |
| Msa1388930 | Msa1458680 | 0.802565 | 5.281148e-49 | -8.615850e-47 |
| Msa1388930 | Msa1460830 | 0.815589 | 8.558273e-52 | -8.615850e-47 |
| Msa1388930 | Msa1463900 | 0.801667 | 8.080243e-49 | -8.615850e-47 |
| Msa1388930 | Msa1466540 | 0.827686 | 1.364105e-54 | -8.615850e-47 |
| Msa0610800 | Msa1388930 | 0.800529 | 1.380926e-48 | -8.615850e-47 |
| Msa0615010 | Msa1388930 | 0.802012 | 6.864946e-49 | -8.615850e-47 |
| Msa0616160 | Msa1388930 | 0.811890 | 5.581437e-51 | -8.615850e-47 |
| Msa0623070 | Msa1388930 | 0.807486 | 4.937244e-50 | -8.615850e-47 |
| Msa0625190 | Msa1388930 | 0.803900 | 2.795311e-49 | -8.615850e-47 |
| Msa0629450 | Msa1388930 | 0.804432 | 2.166491e-49 | -8.615850e-47 |
| Msa0661340 | Msa1388930 | 0.805592 | 1.239107e-49 | -8.615850e-47 |
| Msa0661650 | Msa1388930 | 0.823531 | 1.317705e-53 | -8.615850e-47 |
| Msa0679750 | Msa1388930 | 0.800914 | 1.152704e-48 | -8.615850e-47 |
| Msa0681250 | Msa1388930 | 0.828259 | 9.931629e-55 | -8.615850e-47 |
| Msa0681270 | Msa1388930 | 0.816838 | 4.499243e-52 | -8.615850e-47 |
| Msa0685750 | Msa1388930 | 0.806423 | 8.287101e-50 | -8.615850e-47 |
| Msa0688270 | Msa1388930 | 0.807328 | 5.333044e-50 | -8.615850e-47 |
| Msa0701830 | Msa1388930 | 0.802042 | 6.769445e-49 | -8.615850e-47 |
| Msa0704920 | Msa1388930 | 0.800201 | 1.610347e-48 | -8.615850e-47 |
| Msa0717890 | Msa1388930 | 0.807291 | 5.431014e-50 | -8.615850e-47 |
| Msa0724210 | Msa1388930 | 0.805843 | 1.097624e-49 | -8.615850e-47 |
| Msa0731940 | Msa1388930 | 0.811908 | 5.533444e-51 | -8.615850e-47 |
| Msa0735170 | Msa1388930 | 0.808709 | 2.710059e-50 | -8.615850e-47 |
| Msa0753720 | Msa1388930 | 0.830704 | 2.527775e-55 | -8.615850e-47 |
| Msa0756320 | Msa1388930 | 0.811180 | 7.963706e-51 | -8.615850e-47 |
| Msa0760130 | Msa1388930 | 0.829093 | 6.243603e-55 | -8.615850e-47 |
| Msa0762360 | Msa1388930 | 0.822302 | 2.546951e-53 | -8.615850e-47 |
| Msa0763890 | Msa1388930 | 0.801368 | 9.308189e-49 | -8.615850e-47 |
| Msa0766630 | Msa1388930 | 0.839132 | 1.902776e-57 | -8.615850e-47 |
| Msa0768370 | Msa1388930 | 0.809566 | 1.776503e-50 | -8.615850e-47 |
| Msa0773540 | Msa1388930 | 0.813465 | 2.525416e-51 | -8.615850e-47 |
| Msa0806280 | Msa1388930 | 0.800311 | 1.529752e-48 | -8.615850e-47 |
| Msa0807030 | Msa1388930 | 0.812872 | 3.407367e-51 | -8.615850e-47 |
| Msa0810220 | Msa1388930 | 0.806420 | 8.296564e-50 | -8.615850e-47 |
| Msa0811080 | Msa1388930 | 0.808584 | 2.881924e-50 | -8.615850e-47 |
| Msa0817460 | Msa1388930 | 0.816367 | 5.736333e-52 | -8.615850e-47 |
| Msa0818060 | Msa1388930 | 0.803025 | 4.244837e-49 | -8.615850e-47 |
| Msa0820850 | Msa1388930 | 0.804059 | 2.590579e-49 | -8.615850e-47 |
| Msa0828240 | Msa1388930 | 0.807831 | 4.170522e-50 | -8.615850e-47 |
| Msa0831850 | Msa1388930 | 0.804457 | 2.140506e-49 | -8.615850e-47 |
| Msa0832340 | Msa1388930 | 0.847057 | 1.471297e-59 | -8.615850e-47 |
| Msa0838580 | Msa1388930 | 0.802911 | 4.481207e-49 | -8.615850e-47 |
| Msa0124250 | Msa1388930 | 0.803465 | 3.442049e-49 | -8.615850e-47 |
| Msa0127800 | Msa1388930 | 0.805265 | 1.450909e-49 | -8.615850e-47 |
| Msa0131770 | Msa1388930 | 0.811150 | 8.085478e-51 | -8.615850e-47 |
| Msa0142220 | Msa1388930 | 0.827940 | 1.185198e-54 | -8.615850e-47 |
| Msa0165210 | Msa1388930 | 0.804043 | 2.610918e-49 | -8.615850e-47 |
| Msa0172080 | Msa1388930 | 0.812694 | 3.726753e-51 | -8.615850e-47 |
| Msa0204840 | Msa1388930 | 0.809442 | 1.888370e-50 | -8.615850e-47 |
| Msa0206010 | Msa1388930 | 0.802102 | 6.579213e-49 | -8.615850e-47 |
| Msa0211150 | Msa1388930 | 0.822440 | 2.366231e-53 | -8.615850e-47 |
| Msa0212990 | Msa1388930 | 0.839109 | 1.928554e-57 | -8.615850e-47 |
| Msa0218810 | Msa1388930 | 0.807784 | 4.268946e-50 | -8.615850e-47 |
| Msa0223010 | Msa1388930 | 0.820246 | 7.591029e-53 | -8.615850e-47 |
| Msa0233300 | Msa1388930 | 0.825932 | 3.578355e-54 | -8.615850e-47 |
| Msa1246360 | Msa1388930 | 0.806519 | 7.909234e-50 | -8.615850e-47 |
| Msa1249490 | Msa1388930 | 0.803008 | 4.279404e-49 | -8.615850e-47 |
| Msa1268880 | Msa1388930 | 0.814627 | 1.398889e-51 | -8.615850e-47 |
| Msa1277660 | Msa1388930 | 0.811809 | 5.815458e-51 | -8.615850e-47 |
| Msa1284680 | Msa1388930 | 0.820748 | 5.821913e-53 | -8.615850e-47 |
| Msa1285550 | Msa1388930 | 0.811356 | 7.294141e-51 | -8.615850e-47 |
| Msa1296890 | Msa1388930 | 0.809184 | 2.145165e-50 | -8.615850e-47 |
| Msa1297290 | Msa1388930 | 0.804565 | 2.032028e-49 | -8.615850e-47 |
| Msa1305810 | Msa1388930 | 0.805552 | 1.263665e-49 | -8.615850e-47 |
| Msa1309030 | Msa1388930 | 0.803247 | 3.817745e-49 | -8.615850e-47 |
| Msa1313280 | Msa1388930 | 0.812562 | 3.983438e-51 | -8.615850e-47 |
| Msa1331000 | Msa1388930 | 0.819177 | 1.332107e-52 | -8.615850e-47 |
| Msa0367870 | Msa1388930 | 0.820090 | 8.242237e-53 | -8.615850e-47 |
| Msa0371730 | Msa1388930 | 0.802601 | 5.191389e-49 | -8.615850e-47 |
| Msa0373450 | Msa1388930 | 0.801704 | 7.942016e-49 | -8.615850e-47 |
| Msa0376350 | Msa1388930 | 0.801051 | 1.080309e-48 | -8.615850e-47 |
| Msa0385840 | Msa1388930 | 0.802867 | 4.575140e-49 | -8.615850e-47 |
| Msa0393080 | Msa1388930 | 0.801944 | 7.088192e-49 | -8.615850e-47 |
| Msa0403640 | Msa1388930 | 0.800625 | 1.319910e-48 | -8.615850e-47 |
| Msa0411390 | Msa1388930 | 0.805086 | 1.582014e-49 | -8.615850e-47 |
| Msa0428000 | Msa1388930 | 0.816146 | 6.426705e-52 | -8.615850e-47 |
| Msa0428080 | Msa1388930 | 0.811591 | 6.485859e-51 | -8.615850e-47 |
| Msa0439970 | Msa1388930 | 0.802778 | 4.773214e-49 | -8.615850e-47 |
| Msa0440400 | Msa1388930 | 0.815074 | 1.113472e-51 | -8.615850e-47 |
| Msa0444130 | Msa1388930 | 0.800387 | 1.476031e-48 | -8.615850e-47 |
| Msa0452710 | Msa1388930 | 0.822116 | 2.813273e-53 | -8.615850e-47 |
| Msa0453640 | Msa1388930 | 0.808299 | 3.316043e-50 | -8.615850e-47 |
| Msa0455760 | Msa1388930 | 0.831363 | 1.741428e-55 | -8.615850e-47 |
| Msa0457960 | Msa1388930 | 0.815417 | 9.344375e-52 | -8.615850e-47 |
| Msa0464680 | Msa1388930 | 0.823080 | 1.679382e-53 | -8.615850e-47 |
| Msa0471670 | Msa1388930 | 0.825106 | 5.616228e-54 | -8.615850e-47 |
| Msa0479340 | Msa1388930 | 0.824147 | 9.450165e-54 | -8.615850e-47 |
| Msa0997370 | Msa1388930 | 0.821889 | 3.174960e-53 | -8.615850e-47 |
| Msa0999220 | Msa1388930 | 0.808093 | 3.669310e-50 | -8.615850e-47 |
| Msa0999290 | Msa1388930 | 0.815884 | 7.352868e-52 | -8.615850e-47 |
| Msa0999680 | Msa1388930 | 0.811100 | 8.289640e-51 | -8.615850e-47 |
| Msa0999770 | Msa1388930 | 0.804494 | 2.102950e-49 | -8.615850e-47 |
| Msa1002000 | Msa1388930 | 0.810332 | 1.215268e-50 | -8.615850e-47 |
| Msa1002850 | Msa1388930 | 0.810831 | 9.477608e-51 | -8.615850e-47 |
| Msa1014540 | Msa1388930 | 0.808814 | 2.574231e-50 | -8.615850e-47 |
| Msa1016320 | Msa1388930 | 0.813025 | 3.154120e-51 | -8.615850e-47 |
| Msa1017350 | Msa1388930 | 0.824992 | 5.977019e-54 | -8.615850e-47 |
| Msa1019000 | Msa1388930 | 0.830504 | 2.829031e-55 | -8.615850e-47 |
| Msa1019150 | Msa1388930 | 0.840814 | 6.930428e-58 | -8.615850e-47 |
| Msa1023050 | Msa1388930 | 0.800336 | 1.512110e-48 | -8.615850e-47 |
| Msa1023500 | Msa1388930 | 0.802504 | 5.437368e-49 | -8.615850e-47 |
| Msa1026940 | Msa1388930 | 0.804497 | 2.099490e-49 | -8.615850e-47 |
| Msa1030970 | Msa1388930 | 0.806073 | 9.817204e-50 | -8.615850e-47 |
| Msa1036610 | Msa1388930 | 0.812535 | 4.037832e-51 | -8.615850e-47 |
| Msa1037780 | Msa1388930 | 0.825894 | 3.653559e-54 | -8.615850e-47 |
| Msa1045200 | Msa1388930 | 0.800927 | 1.145247e-48 | -8.615850e-47 |
| Msa1047080 | Msa1388930 | 0.812020 | 5.229784e-51 | -8.615850e-47 |
| Msa1054990 | Msa1388930 | 0.811732 | 6.043515e-51 | -8.615850e-47 |
| Msa1063400 | Msa1388930 | 0.806508 | 7.949492e-50 | -8.615850e-47 |
| Msa1065570 | Msa1388930 | 0.817636 | 2.975468e-52 | -8.615850e-47 |
| Msa1075540 | Msa1388930 | 0.808162 | 3.547012e-50 | -8.615850e-47 |
| Msa1075650 | Msa1388930 | 0.855048 | 8.193376e-62 | -8.615850e-47 |
| Msa1076700 | Msa1388930 | 0.804262 | 2.350657e-49 | -8.615850e-47 |
| Msa1079430 | Msa1388930 | 0.811699 | 6.143467e-51 | -8.615850e-47 |
| Msa1081330 | Msa1388930 | 0.840788 | 7.041122e-58 | -8.615850e-47 |
| Msa1082500 | Msa1388930 | 0.807747 | 4.345122e-50 | -8.615850e-47 |
| Msa1083840 | Msa1388930 | 0.820976 | 5.158660e-53 | -8.615850e-47 |
| Msa1100050 | Msa1388930 | 0.800335 | 1.512688e-48 | -8.615850e-47 |
| Msa1101090 | Msa1388930 | 0.814445 | 1.535360e-51 | -8.615850e-47 |
| Msa1103180 | Msa1388930 | 0.830832 | 2.352014e-55 | -8.615850e-47 |
| Msa1104090 | Msa1388930 | 0.807206 | 5.661699e-50 | -8.615850e-47 |
| Msa0251640 | Msa1388930 | 0.800850 | 1.187487e-48 | -8.615850e-47 |
| Msa0260780 | Msa1388930 | 0.808267 | 3.368403e-50 | -8.615850e-47 |
| Msa0264830 | Msa1388930 | 0.820174 | 7.884291e-53 | -8.615850e-47 |
| Msa0265670 | Msa1388930 | 0.804913 | 1.718929e-49 | -8.615850e-47 |
| Msa0273100 | Msa1388930 | 0.815472 | 9.082621e-52 | -8.615850e-47 |
| Msa0287870 | Msa1388930 | 0.802932 | 4.436840e-49 | -8.615850e-47 |
| Msa0290720 | Msa1388930 | 0.814328 | 1.629688e-51 | -8.615850e-47 |
| Msa0290870 | Msa1388930 | 0.833896 | 4.097270e-56 | -8.615850e-47 |
| Msa0292930 | Msa1388930 | 0.809284 | 2.041966e-50 | -8.615850e-47 |
| Msa0302870 | Msa1388930 | 0.812223 | 4.724375e-51 | -8.615850e-47 |
| Msa0307540 | Msa1388930 | 0.825752 | 3.950324e-54 | -8.615850e-47 |
| Msa0308460 | Msa1388930 | 0.804903 | 1.727636e-49 | -8.615850e-47 |
| Msa0317010 | Msa1388930 | 0.803276 | 3.765785e-49 | -8.615850e-47 |
| Msa0321080 | Msa1388930 | 0.813204 | 2.880966e-51 | -8.615850e-47 |
| Msa0326110 | Msa1388930 | 0.809569 | 1.773268e-50 | -8.615850e-47 |
| Msa0326520 | Msa1388930 | 0.802272 | 6.069870e-49 | -8.615850e-47 |
| Msa0326940 | Msa1388930 | 0.809202 | 2.126346e-50 | -8.615850e-47 |
| Msa0330340 | Msa1388930 | 0.824081 | 9.791614e-54 | -8.615850e-47 |
| Msa0331000 | Msa1388930 | 0.814513 | 1.482969e-51 | -8.615850e-47 |
| Msa0339620 | Msa1388930 | 0.825289 | 5.083981e-54 | -8.615850e-47 |
| Msa0340340 | Msa1388930 | 0.814670 | 1.368735e-51 | -8.615850e-47 |
| Msa0340470 | Msa1388930 | 0.808550 | 2.931273e-50 | -8.615850e-47 |
| Msa0357340 | Msa1388930 | 0.813670 | 2.275490e-51 | -8.615850e-47 |
| Msa0361780 | Msa1388930 | 0.800078 | 1.706381e-48 | -8.615850e-47 |
| Msa0363530 | Msa1388930 | 0.803638 | 3.168736e-49 | -8.615850e-47 |
| Msa0363790 | Msa1388930 | 0.831065 | 2.061917e-55 | -8.615850e-47 |
| Msa1119940 | Msa1388930 | 0.806879 | 6.638331e-50 | -8.615850e-47 |
| Msa1121480 | Msa1388930 | 0.824535 | 7.659661e-54 | -8.615850e-47 |
| Msa1121490 | Msa1388930 | 0.851030 | 1.157163e-60 | -8.615850e-47 |
| Msa1137570 | Msa1388930 | 0.829122 | 6.140795e-55 | -8.615850e-47 |
| Msa1141910 | Msa1388930 | 0.815617 | 8.433807e-52 | -8.615850e-47 |
| Msa1142020 | Msa1388930 | 0.800843 | 1.191432e-48 | -8.615850e-47 |
| Msa1142670 | Msa1388930 | 0.810806 | 9.595226e-51 | -8.615850e-47 |
| Msa1147740 | Msa1388930 | 0.865889 | 4.254173e-65 | -8.615850e-47 |
| Msa1152440 | Msa1388930 | 0.812286 | 4.576343e-51 | -8.615850e-47 |
| Msa1162780 | Msa1388930 | 0.804642 | 1.958395e-49 | -8.615850e-47 |
| Msa1170940 | Msa1388930 | 0.822064 | 2.892611e-53 | -8.615850e-47 |
| Msa1179770 | Msa1388930 | 0.808846 | 2.533448e-50 | -8.615850e-47 |
| Msa1185110 | Msa1388930 | 0.816172 | 6.343206e-52 | -8.615850e-47 |
| Msa1188710 | Msa1388930 | 0.838831 | 2.276640e-57 | -8.615850e-47 |
| Msa1190920 | Msa1388930 | 0.820896 | 5.383787e-53 | -8.615850e-47 |
| Msa0484650 | Msa1388930 | 0.834301 | 3.243364e-56 | -8.615850e-47 |
| Msa0486690 | Msa1388930 | 0.825548 | 4.413864e-54 | -8.615850e-47 |
| Msa0488560 | Msa1388930 | 0.826869 | 2.140849e-54 | -8.615850e-47 |
| Msa0516170 | Msa1388930 | 0.815416 | 9.350406e-52 | -8.615850e-47 |
| Msa0545210 | Msa1388930 | 0.841220 | 5.422778e-58 | -8.615850e-47 |
| Msa0565350 | Msa1388930 | 0.803181 | 3.939704e-49 | -8.615850e-47 |
| Msa0565450 | Msa1388930 | 0.801354 | 9.367744e-49 | -8.615850e-47 |
| Msa0585230 | Msa1388930 | 0.801088 | 1.061893e-48 | -8.615850e-47 |
| Msa0594560 | Msa1388930 | 0.807896 | 4.040895e-50 | -8.615850e-47 |
| Msa0600700 | Msa1388930 | 0.811358 | 7.286494e-51 | -8.615850e-47 |
| Msa0844490 | Msa1388930 | 0.807352 | 5.271940e-50 | -8.615850e-47 |
| Msa0844570 | Msa1388930 | 0.809004 | 2.344364e-50 | -8.615850e-47 |
| Msa0861130 | Msa1388930 | 0.801111 | 1.050525e-48 | -8.615850e-47 |
| Msa0864070 | Msa1388930 | 0.803902 | 2.793280e-49 | -8.615850e-47 |
| Msa0875290 | Msa1388930 | 0.810968 | 8.853115e-51 | -8.615850e-47 |
| Msa0888130 | Msa1388930 | 0.804540 | 2.056760e-49 | -8.615850e-47 |
| Msa0898750 | Msa1388930 | 0.805926 | 1.054457e-49 | -8.615850e-47 |
| Msa0899450 | Msa1388930 | 0.802040 | 6.774028e-49 | -8.615850e-47 |
| Msa0899970 | Msa1388930 | 0.816345 | 5.801748e-52 | -8.615850e-47 |
| Msa0900020 | Msa1388930 | 0.809841 | 1.550153e-50 | -8.615850e-47 |
| Msa0900620 | Msa1388930 | 0.800832 | 1.197622e-48 | -8.615850e-47 |
| Msa0901930 | Msa1388930 | 0.810075 | 1.380293e-50 | -8.615850e-47 |
| Msa0907040 | Msa1388930 | 0.803343 | 3.648458e-49 | -8.615850e-47 |
| Msa0907260 | Msa1388930 | 0.802721 | 4.905403e-49 | -8.615850e-47 |
| Msa0914270 | Msa1388930 | 0.809787 | 1.591835e-50 | -8.615850e-47 |
| Msa0925290 | Msa1388930 | 0.810273 | 1.250937e-50 | -8.615850e-47 |
| Msa0926890 | Msa1388930 | 0.805041 | 1.616504e-49 | -8.615850e-47 |
| Msa0927290 | Msa1388930 | 0.803488 | 3.404187e-49 | -8.615850e-47 |
| Msa0927310 | Msa1388930 | 0.821422 | 4.071534e-53 | -8.615850e-47 |
| Msa0927380 | Msa1388930 | 0.829720 | 4.396846e-55 | -8.615850e-47 |
| Msa0933100 | Msa1388930 | 0.805871 | 1.082870e-49 | -8.615850e-47 |
| Msa0936060 | Msa1388930 | 0.804847 | 1.775136e-49 | -8.615850e-47 |
| Msa0954910 | Msa1388930 | 0.810864 | 9.325000e-51 | -8.615850e-47 |
| Msa0964310 | Msa1388930 | 0.816442 | 5.517692e-52 | -8.615850e-47 |
| Msa0964900 | Msa1388930 | 0.831112 | 2.007320e-55 | -8.615850e-47 |
| Msa0965080 | Msa1388930 | 0.811610 | 6.424811e-51 | -8.615850e-47 |
| Msa0965290 | Msa1388930 | 0.812198 | 4.783645e-51 | -8.615850e-47 |
| Msa0967580 | Msa1388930 | 0.804124 | 2.511265e-49 | -8.615850e-47 |
| Msa0969450 | Msa1388930 | 0.804306 | 2.301029e-49 | -8.615850e-47 |
| Msa0969520 | Msa1388930 | 0.820774 | 5.742092e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388930 | MtrunA17_Chr6g0486001 | 97.394 | 307 | 8 | 0 | 1 | 307 | 1 | 307 | 0.0 | 618 |
| Msa1388930 | MtrunA17_Chr2g0331671 | 53.674 | 313 | 133 | 7 | 1 | 306 | 2 | 309 | 1.21e-111 | 325 |
| Msa1388930 | MtrunA17_Chr6g0483441 | 38.535 | 314 | 165 | 6 | 1 | 306 | 1 | 294 | 1.74e-59 | 192 |
| Msa1388930 | MtrunA17_Chr4g0053001 | 40.557 | 323 | 173 | 8 | 1 | 307 | 12 | 331 | 3.86e-59 | 192 |
| Msa1388930 | MtrunA17_Chr8g0392551 | 41.479 | 311 | 162 | 8 | 1 | 306 | 1 | 296 | 5.61e-55 | 180 |
| Msa1388930 | MtrunA17_Chr4g0038691 | 37.580 | 314 | 161 | 11 | 1 | 294 | 6 | 304 | 1.89e-48 | 164 |
| Msa1388930 | MtrunA17_Chr3g0090061 | 27.885 | 312 | 178 | 11 | 25 | 294 | 29 | 335 | 3.99e-21 | 92.0 |
| Msa1388930 | MtrunA17_Chr3g0091821 | 32.934 | 167 | 95 | 4 | 125 | 289 | 25 | 176 | 3.29e-20 | 86.7 |
| Msa1388930 | MtrunA17_Chr8g0379281 | 37.037 | 81 | 51 | 0 | 135 | 215 | 106 | 186 | 3.67e-14 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1388930 | AT3G24605.1 | 41.935 | 310 | 157 | 7 | 1 | 303 | 3 | 296 | 2.18e-71 | 223 |
| Msa1388930 | AT1G45688.1 | 38.484 | 343 | 162 | 9 | 1 | 301 | 1 | 336 | 8.86e-60 | 194 |
| Msa1388930 | AT5G42860.1 | 37.700 | 313 | 153 | 7 | 1 | 286 | 1 | 298 | 3.45e-58 | 190 |
| Msa1388930 | AT3G24600.1 | 39.088 | 307 | 178 | 6 | 1 | 304 | 2 | 302 | 4.89e-51 | 171 |
| Msa1388930 | AT1G45688.2 | 40.000 | 245 | 118 | 8 | 1 | 223 | 1 | 238 | 6.58e-41 | 143 |
| Msa1388930 | AT2G41990.1 | 33.882 | 304 | 163 | 8 | 1 | 289 | 1 | 281 | 8.29e-40 | 141 |
| Msa1388930 | AT4G35170.1 | 32.632 | 285 | 168 | 8 | 15 | 287 | 8 | 280 | 9.27e-40 | 141 |
| Msa1388930 | AT3G08490.1 | 24.883 | 213 | 152 | 5 | 99 | 304 | 57 | 268 | 9.23e-15 | 73.6 |
Find 84 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTGTTTATAACCCTTATT+AGG | 0.144732 | tig0021200:+33240 | None:intergenic |
| GGAATTGAGATTTGAGAATT+TGG | 0.176623 | tig0021200:+33279 | None:intergenic |
| ATTAAAGATGGAAAATTTAA+TGG | 0.191613 | tig0021200:+33123 | None:intergenic |
| ATAACCCTTATTAGGGGTTT+TGG | 0.196172 | tig0021200:+33248 | None:intergenic |
| GAAGGACTTTGAACGTAATA+AGG | 0.197913 | tig0021200:+32990 | None:intergenic |
| TACTGGCTTGAGATATATTA+AGG | 0.207723 | tig0021200:-30177 | Msa1388930:three_prime_UTR |
| AAAACCCAAAACCCCTAATA+AGG | 0.221938 | tig0021200:-33253 | Msa1388930:five_prime_UTR |
| TGTGGGTTGGGATGAGAATT+TGG | 0.245470 | tig0021200:+33186 | None:intergenic |
| TTGAAGAGGAAGTGAAGAAT+TGG | 0.281682 | tig0021200:+33330 | None:intergenic |
| GATGAGAATTTGGTATTTGA+TGG | 0.302879 | tig0021200:+33196 | None:intergenic |
| ATACAACATCTAAGTGGTTT+TGG | 0.309066 | tig0021200:-30242 | Msa1388930:exon |
| TGCTGTTTGTGGGTTTGTTT+TGG | 0.310858 | tig0021200:-32694 | Msa1388930:CDS |
| AATAGAAAAGTGAATGATAA+AGG | 0.318907 | tig0021200:-32813 | Msa1388930:CDS |
| TCACCTTCACATCAATCTTA+TGG | 0.323598 | tig0021200:-32909 | Msa1388930:CDS |
| TAAAGGGTGGATTGGATCTA+AGG | 0.346851 | tig0021200:-32796 | Msa1388930:CDS |
| ATTGTTTATAACCCTTATTA+GGG | 0.348409 | tig0021200:+33241 | None:intergenic |
| ACAGTACATAACTTCTACTT+TGG | 0.351398 | tig0021200:-31346 | Msa1388930:CDS |
| AGATATATTAAGGGTCTGTT+TGG | 0.356359 | tig0021200:-30167 | Msa1388930:three_prime_UTR |
| TGACAATTAAGAGGGTGTTT+AGG | 0.362099 | tig0021200:-30121 | Msa1388930:three_prime_UTR |
| AAGGACTTTGAACGTAATAA+GGG | 0.376152 | tig0021200:+32991 | None:intergenic |
| GCTATTTCAGTTCATTCTAC+TGG | 0.384851 | tig0021200:-30194 | Msa1388930:three_prime_UTR |
| GTTTGTGAATTGATTAAAGA+TGG | 0.396112 | tig0021200:+33111 | None:intergenic |
| TTTGATGTACTTGTTGTTGT+GGG | 0.406752 | tig0021200:+30285 | None:intergenic |
| TCATGAGAAGATTCTCTTGA+AGG | 0.427779 | tig0021200:+32972 | None:intergenic |
| TGAAGAGGAAGTGAAGAATT+GGG | 0.434031 | tig0021200:+33331 | None:intergenic |
| GCTTAGTTATGACAATTAAG+AGG | 0.436532 | tig0021200:-30130 | Msa1388930:three_prime_UTR |
| TCTTCTTCAAGTAGAATCTC+TGG | 0.444326 | tig0021200:-32870 | Msa1388930:CDS |
| GAAGAAGAAAATGGTGGTTA+TGG | 0.447068 | tig0021200:-32768 | Msa1388930:CDS |
| GTGAATGATAAAGGGTGGAT+TGG | 0.450115 | tig0021200:-32804 | Msa1388930:CDS |
| TTCACTGTAAGCATCTTAGT+TGG | 0.459875 | tig0021200:+31298 | None:intergenic |
| ACTGGCTTGAGATATATTAA+GGG | 0.461338 | tig0021200:-30176 | Msa1388930:three_prime_UTR |
| GTTTGATGTACTTGTTGTTG+TGG | 0.464472 | tig0021200:+30284 | None:intergenic |
| AAACCCAAAACCCCTAATAA+GGG | 0.467771 | tig0021200:-33252 | Msa1388930:five_prime_UTR |
| GGTGAGAAGTGGAGTTGAAG+AGG | 0.469307 | tig0021200:+33316 | None:intergenic |
| GGAAGCAAGGTTCCATTGTA+TGG | 0.470323 | tig0021200:-30454 | Msa1388930:CDS |
| TGGTGCAGATGTTGCTAGCT+CGG | 0.471095 | tig0021200:-30428 | Msa1388930:CDS |
| GAAGTGAAGAATTGGGATCA+TGG | 0.471548 | tig0021200:+33338 | None:intergenic |
| GAGAATTTGGTATTTGATGG+AGG | 0.496069 | tig0021200:+33199 | None:intergenic |
| AAGTCGCGCGGAAATGTTGT+AGG | 0.496383 | tig0021200:-30364 | Msa1388930:CDS |
| AAGGTGATTGAAGAAGAAAA+TGG | 0.496674 | tig0021200:-32777 | Msa1388930:CDS |
| GTATATTGACAGACACTGTT+CGG | 0.499883 | tig0021200:+30479 | None:intergenic |
| TTTGTGATCTTGGTGATGAT+GGG | 0.501451 | tig0021200:+33021 | None:intergenic |
| GGAGAAGGGTCAGACGTCAC+TGG | 0.514181 | tig0021200:-31325 | Msa1388930:CDS |
| CATAACTTCTACTTTGGAGA+AGG | 0.514215 | tig0021200:-31340 | Msa1388930:CDS |
| TTGAAGAAGAAGCTCTTGAA+TGG | 0.526972 | tig0021200:+32883 | None:intergenic |
| ATAGAAAAGTGAATGATAAA+GGG | 0.527874 | tig0021200:-32812 | Msa1388930:CDS |
| GAATTGGGATCATGGGAAAG+TGG | 0.529774 | tig0021200:+33346 | None:intergenic |
| GAATGAAGAGAGGTGAGAAG+TGG | 0.530187 | tig0021200:+33305 | None:intergenic |
| CGGAAATGTTGTAGGCAAGT+TGG | 0.532289 | tig0021200:-30356 | Msa1388930:CDS |
| AAGGTTCCATTGTATGGCGC+TGG | 0.535461 | tig0021200:-30448 | Msa1388930:CDS |
| AAGTGAAGAATTGGGATCAT+GGG | 0.537782 | tig0021200:+33339 | None:intergenic |
| TCAAGAGAATCTTCTCATGA+TGG | 0.544641 | tig0021200:-32969 | Msa1388930:CDS |
| GAAAAGTGAATGATAAAGGG+TGG | 0.557185 | tig0021200:-32809 | Msa1388930:CDS |
| CTTAGTTATGACAATTAAGA+GGG | 0.558237 | tig0021200:-30129 | Msa1388930:three_prime_UTR |
| AACAATGCAACCAAGTCCAA+TGG | 0.570691 | tig0021200:-32934 | Msa1388930:CDS |
| TGATGTACTTGTTGTTGTGG+GGG | 0.577495 | tig0021200:+30287 | None:intergenic |
| ATACATAAGATTCACTGACT+TGG | 0.579991 | tig0021200:+31216 | None:intergenic |
| TTGATGTACTTGTTGTTGTG+GGG | 0.580202 | tig0021200:+30286 | None:intergenic |
| TGATGTGAAGGTGAATCCAT+TGG | 0.581487 | tig0021200:+32918 | None:intergenic |
| GAAGGTGAATCCATTGGACT+TGG | 0.584702 | tig0021200:+32924 | None:intergenic |
| GTGATCGAAATGGAGTTTCG+AGG | 0.592967 | tig0021200:-32734 | Msa1388930:CDS |
| TCTGATCTTACAGTTGCGAC+CGG | 0.593421 | tig0021200:-31193 | Msa1388930:CDS |
| AATTTGGACAGAATGAAGAG+AGG | 0.595038 | tig0021200:+33295 | None:intergenic |
| GTCTTTGAAGTTAAGTCGCG+CGG | 0.601720 | tig0021200:-30376 | Msa1388930:CDS |
| TGTCAATATACAAGGAAGCA+AGG | 0.603269 | tig0021200:-30467 | Msa1388930:CDS |
| ACAGTGTCTGTCAATATACA+AGG | 0.604063 | tig0021200:-30475 | Msa1388930:CDS |
| ATAACTTCTACTTTGGAGAA+GGG | 0.607546 | tig0021200:-31339 | Msa1388930:CDS |
| TCTGCACCAGCGCCATACAA+TGG | 0.611769 | tig0021200:+30442 | None:intergenic |
| TCGAAATGGAGTTTCGAGGA+GGG | 0.621143 | tig0021200:-32730 | Msa1388930:CDS |
| ATGTTGTAGGCAAGTTGGTG+AGG | 0.621904 | tig0021200:-30351 | Msa1388930:CDS |
| AATGAACTGAAATAGCTCAC+AGG | 0.622836 | tig0021200:+30201 | None:intergenic |
| GTGATTGAAGAAGAAAATGG+TGG | 0.627521 | tig0021200:-32774 | Msa1388930:CDS |
| TTGTTTATAACCCTTATTAG+GGG | 0.629375 | tig0021200:+33242 | None:intergenic |
| CAAACCTCAGCTCAGTGTCA+AGG | 0.632858 | tig0021200:-32625 | Msa1388930:intron |
| AGGACTTTGAACGTAATAAG+GGG | 0.639543 | tig0021200:+32992 | None:intergenic |
| TATACCTTGACACTGAGCTG+AGG | 0.640482 | tig0021200:+32621 | None:intergenic |
| ATGTAGATACAACATCTAAG+TGG | 0.640814 | tig0021200:-30248 | Msa1388930:exon |
| TGACCATAAGATTGATGTGA+AGG | 0.643898 | tig0021200:+32906 | None:intergenic |
| TCTTCAAGTAGAATCTCTGG+TGG | 0.645890 | tig0021200:-32867 | Msa1388930:CDS |
| TGTTAGAATACTTACCTCGC+CGG | 0.646947 | tig0021200:+31174 | None:intergenic |
| ATCGAAATGGAGTTTCGAGG+AGG | 0.650916 | tig0021200:-32731 | Msa1388930:CDS |
| TATTGACAGACACTGTTCGG+CGG | 0.651348 | tig0021200:+30482 | None:intergenic |
| TCTTACAGTTGCGACCGGCG+AGG | 0.653403 | tig0021200:-31188 | Msa1388930:intron |
| GTTGCTAGCTCGGTGAACAA+CGG | 0.683429 | tig0021200:-30418 | Msa1388930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATAGTATATTTTTATAG+AGG | - | tig0021200:33262-33281 | Msa1388930:five_prime_UTR | 10.0% |
| !! | ATTAAAGATGGAAAATTTAA+TGG | + | tig0021200:30201-30220 | None:intergenic | 15.0% |
| !!! | CTAATTGTTTTTTTAATCAA+AGG | - | tig0021200:31077-31096 | Msa1388930:intron | 15.0% |
| !!! | TGTTTTTTATTTTAGTTAGA+AGG | - | tig0021200:31113-31132 | Msa1388930:intron | 15.0% |
| !! | AATGAAATTTCAAAAAAGTT+GGG | + | tig0021200:31600-31619 | None:intergenic | 15.0% |
| !! | AAATGAAATTTCAAAAAAGT+TGG | + | tig0021200:31601-31620 | None:intergenic | 15.0% |
| !! | ATTGTTTATAACCCTTATTA+GGG | + | tig0021200:30083-30102 | None:intergenic | 20.0% |
| !! | AATTGTTTATAACCCTTATT+AGG | + | tig0021200:30084-30103 | None:intergenic | 20.0% |
| !! | AATAGAAAAGTGAATGATAA+AGG | - | tig0021200:30508-30527 | Msa1388930:CDS | 20.0% |
| !! | ATAGAAAAGTGAATGATAAA+GGG | - | tig0021200:30509-30528 | Msa1388930:CDS | 20.0% |
| !!! | TTTGTTTTGTTTGATCATTT+GGG | - | tig0021200:30657-30676 | Msa1388930:intron | 20.0% |
| !!! | TCACATTTGTGTTTTAATTA+AGG | - | tig0021200:30743-30762 | Msa1388930:intron | 20.0% |
| !!! | TTGATAGTTAAATTCATACT+AGG | - | tig0021200:31244-31263 | Msa1388930:CDS | 20.0% |
| !!! | GAAAATTAGTAATTCCATTT+TGG | + | tig0021200:31286-31305 | None:intergenic | 20.0% |
| !!! | AAATGGAATTACTAATTTTC+CGG | - | tig0021200:31286-31305 | Msa1388930:CDS | 20.0% |
| !! | TGATAAACTTATAGATGTTT+AGG | + | tig0021200:32625-32644 | None:intergenic | 20.0% |
| !!! | AACTATAAGTTGTTTTCATA+TGG | + | tig0021200:33291-33310 | None:intergenic | 20.0% |
| ! | TTGTTTATAACCCTTATTAG+GGG | + | tig0021200:30082-30101 | None:intergenic | 25.0% |
| !!! | CTTTAGGTTTGAATTTTTGT+GGG | + | tig0021200:30155-30174 | None:intergenic | 25.0% |
| ! | ATGAGAAAAATGTAAGCTTT+AGG | + | tig0021200:30171-30190 | None:intergenic | 25.0% |
| ! | GTTTGTGAATTGATTAAAGA+TGG | + | tig0021200:30213-30232 | None:intergenic | 25.0% |
| !!! | TGGTTATAATAGCTCTTTTT+TGG | - | tig0021200:30474-30493 | Msa1388930:CDS | 25.0% |
| !!! | GGTTATAATAGCTCTTTTTT+GGG | - | tig0021200:30475-30494 | Msa1388930:CDS | 25.0% |
| !!! | GTTTGTTTTGTTTGATCATT+TGG | - | tig0021200:30656-30675 | Msa1388930:intron | 25.0% |
| ! | CAGGAAAATATATGATCATT+TGG | - | tig0021200:31193-31212 | Msa1388930:CDS | 25.0% |
| ! | ATTCATACTAGGAGATATTA+TGG | - | tig0021200:31255-31274 | Msa1388930:CDS | 25.0% |
| ! | CTTAGTTATGACAATTAAGA+GGG | - | tig0021200:33192-33211 | Msa1388930:five_prime_UTR | 25.0% |
| GGAATTGAGATTTGAGAATT+TGG | + | tig0021200:30045-30064 | None:intergenic | 30.0% | |
| GATGAGAATTTGGTATTTGA+TGG | + | tig0021200:30128-30147 | None:intergenic | 30.0% | |
| !! | GCTTTAGGTTTGAATTTTTG+TGG | + | tig0021200:30156-30175 | None:intergenic | 30.0% |
| ! | AAGCTTACATTTTTCTCATC+TGG | - | tig0021200:30172-30191 | Msa1388930:three_prime_UTR | 30.0% |
| ! | AGCTTACATTTTTCTCATCT+GGG | - | tig0021200:30173-30192 | Msa1388930:three_prime_UTR | 30.0% |
| AAGGACTTTGAACGTAATAA+GGG | + | tig0021200:30333-30352 | None:intergenic | 30.0% | |
| AAGGTGATTGAAGAAGAAAA+TGG | - | tig0021200:30544-30563 | Msa1388930:intron | 30.0% | |
| !!! | AGTTTTTCATTGCTGTTTGT+GGG | - | tig0021200:30617-30636 | Msa1388930:intron | 30.0% |
| !!! | GTTTTAATTAAGGCTCTGTT+TGG | - | tig0021200:30753-30772 | Msa1388930:intron | 30.0% |
| CTTGCAAAGCTTATAGAAAT+AGG | - | tig0021200:30895-30914 | Msa1388930:intron | 30.0% | |
| !!! | AAGCACTTTTAAGACTGTTT+GGG | + | tig0021200:30966-30985 | None:intergenic | 30.0% |
| !!! | TAAGCACTTTTAAGACTGTT+TGG | + | tig0021200:30967-30986 | None:intergenic | 30.0% |
| ! | AGTCCTAAATGGTATACTTT+TGG | - | tig0021200:31022-31041 | Msa1388930:intron | 30.0% |
| ! | GTCCTAAATGGTATACTTTT+GGG | - | tig0021200:31023-31042 | Msa1388930:intron | 30.0% |
| ! | TACCCAAAAGTATACCATTT+AGG | + | tig0021200:31028-31047 | None:intergenic | 30.0% |
| ATATTATGGTTCAGCCAAAA+TGG | - | tig0021200:31269-31288 | Msa1388930:CDS | 30.0% | |
| ATCTGTAATCTATACTCTAC+CGG | + | tig0021200:31308-31327 | None:intergenic | 30.0% | |
| AGTATACATAATACACCACT+CGG | + | tig0021200:31474-31493 | None:intergenic | 30.0% | |
| AAATTTCAAAAAAGTTGGGC+AGG | + | tig0021200:31596-31615 | None:intergenic | 30.0% | |
| CATAGTTTATCACAGAACAA+TGG | - | tig0021200:31752-31771 | Msa1388930:intron | 30.0% | |
| TTGTTAACTAGTAGCTATAG+TGG | + | tig0021200:31809-31828 | None:intergenic | 30.0% | |
| TAGCTACTAGTTAACAACAT+TGG | - | tig0021200:31812-31831 | Msa1388930:intron | 30.0% | |
| TACTAGTTAACAACATTGGT+TGG | - | tig0021200:31816-31835 | Msa1388930:intron | 30.0% | |
| ACAGTACATAACTTCTACTT+TGG | - | tig0021200:31975-31994 | Msa1388930:intron | 30.0% | |
| ! | ATAACTTCTACTTTGGAGAA+GGG | - | tig0021200:31982-32001 | Msa1388930:intron | 30.0% |
| ! | ATACATAAGATTCACTGACT+TGG | + | tig0021200:32108-32127 | None:intergenic | 30.0% |
| GTTTCTAAATCAACAAGTAC+TGG | + | tig0021200:32177-32196 | None:intergenic | 30.0% | |
| AGTTTCTCAAGTACTTATGT+CGG | + | tig0021200:32272-32291 | None:intergenic | 30.0% | |
| TAAGTACTTGAGAAACTGTT+TGG | - | tig0021200:32275-32294 | Msa1388930:intron | 30.0% | |
| AAGTACTTGAGAAACTGTTT+GGG | - | tig0021200:32276-32295 | Msa1388930:intron | 30.0% | |
| !!! | TGAACTCACTTTTGACTTAT+GGG | + | tig0021200:32696-32715 | None:intergenic | 30.0% |
| !!! | TTGAACTCACTTTTGACTTA+TGG | + | tig0021200:32697-32716 | None:intergenic | 30.0% |
| GTCAAAAGTGAGTTCAAAAT+TGG | - | tig0021200:32700-32719 | Msa1388930:CDS | 30.0% | |
| ATGGAATTTGACAGTAAGAA+TGG | + | tig0021200:32780-32799 | None:intergenic | 30.0% | |
| !! | TTTGATGTACTTGTTGTTGT+GGG | + | tig0021200:33039-33058 | None:intergenic | 30.0% |
| ATGTAGATACAACATCTAAG+TGG | - | tig0021200:33073-33092 | Msa1388930:exon | 30.0% | |
| ! | ATACAACATCTAAGTGGTTT+TGG | - | tig0021200:33079-33098 | Msa1388930:exon | 30.0% |
| !! | TACTGGCTTGAGATATATTA+AGG | - | tig0021200:33144-33163 | Msa1388930:five_prime_UTR | 30.0% |
| !! | ACTGGCTTGAGATATATTAA+GGG | - | tig0021200:33145-33164 | Msa1388930:five_prime_UTR | 30.0% |
| AGATATATTAAGGGTCTGTT+TGG | - | tig0021200:33154-33173 | Msa1388930:five_prime_UTR | 30.0% | |
| GCTTAGTTATGACAATTAAG+AGG | - | tig0021200:33191-33210 | Msa1388930:five_prime_UTR | 30.0% | |
| AAGTGAAGAATTGGGATCAT+GGG | + | tig0021200:29985-30004 | None:intergenic | 35.0% | |
| TGAAGAGGAAGTGAAGAATT+GGG | + | tig0021200:29993-30012 | None:intergenic | 35.0% | |
| TTGAAGAGGAAGTGAAGAAT+TGG | + | tig0021200:29994-30013 | None:intergenic | 35.0% | |
| AATTTGGACAGAATGAAGAG+AGG | + | tig0021200:30029-30048 | None:intergenic | 35.0% | |
| AAAACCCAAAACCCCTAATA+AGG | - | tig0021200:30068-30087 | Msa1388930:three_prime_UTR | 35.0% | |
| AAACCCAAAACCCCTAATAA+GGG | - | tig0021200:30069-30088 | Msa1388930:three_prime_UTR | 35.0% | |
| ! | TAACCCTTATTAGGGGTTTT+GGG | + | tig0021200:30075-30094 | None:intergenic | 35.0% |
| ! | ATAACCCTTATTAGGGGTTT+TGG | + | tig0021200:30076-30095 | None:intergenic | 35.0% |
| GAGAATTTGGTATTTGATGG+AGG | + | tig0021200:30125-30144 | None:intergenic | 35.0% | |
| ! | GGTTTGAATTTTTGTGGGTT+GGG | + | tig0021200:30150-30169 | None:intergenic | 35.0% |
| ! | AGGTTTGAATTTTTGTGGGT+TGG | + | tig0021200:30151-30170 | None:intergenic | 35.0% |
| !! | TTTGTGATCTTGGTGATGAT+GGG | + | tig0021200:30303-30322 | None:intergenic | 35.0% |
| !!! | TTTTGTGATCTTGGTGATGA+TGG | + | tig0021200:30304-30323 | None:intergenic | 35.0% |
| AGGACTTTGAACGTAATAAG+GGG | + | tig0021200:30332-30351 | None:intergenic | 35.0% | |
| GAAGGACTTTGAACGTAATA+AGG | + | tig0021200:30334-30353 | None:intergenic | 35.0% | |
| TCATGAGAAGATTCTCTTGA+AGG | + | tig0021200:30352-30371 | None:intergenic | 35.0% | |
| TCAAGAGAATCTTCTCATGA+TGG | - | tig0021200:30352-30371 | Msa1388930:CDS | 35.0% | |
| TCACCTTCACATCAATCTTA+TGG | - | tig0021200:30412-30431 | Msa1388930:CDS | 35.0% | |
| TGACCATAAGATTGATGTGA+AGG | + | tig0021200:30418-30437 | None:intergenic | 35.0% | |
| TTGAAGAAGAAGCTCTTGAA+TGG | + | tig0021200:30441-30460 | None:intergenic | 35.0% | |
| TCTTCTTCAAGTAGAATCTC+TGG | - | tig0021200:30451-30470 | Msa1388930:CDS | 35.0% | |
| GAAAAGTGAATGATAAAGGG+TGG | - | tig0021200:30512-30531 | Msa1388930:CDS | 35.0% | |
| GTGATTGAAGAAGAAAATGG+TGG | - | tig0021200:30547-30566 | Msa1388930:intron | 35.0% | |
| GAAGAAGAAAATGGTGGTTA+TGG | - | tig0021200:30553-30572 | Msa1388930:intron | 35.0% | |
| !! | GATTTTGATCGTGATCGAAA+TGG | - | tig0021200:30577-30596 | Msa1388930:intron | 35.0% |
| !!! | CAGTTTTTCATTGCTGTTTG+TGG | - | tig0021200:30616-30635 | Msa1388930:intron | 35.0% |
| AATAGGCTGAAAACGCTTTA+TGG | - | tig0021200:30912-30931 | Msa1388930:intron | 35.0% | |
| TCAATCCATACAGTCCTAAA+TGG | - | tig0021200:31011-31030 | Msa1388930:intron | 35.0% | |
| ! | GTATACCATTTAGGACTGTA+TGG | + | tig0021200:31019-31038 | None:intergenic | 35.0% |
| CATTCTGTTCAGTTCATACA+TGG | - | tig0021200:31337-31356 | Msa1388930:CDS | 35.0% | |
| ! | TCAGTTCATACATGGATTGA+CGG | - | tig0021200:31345-31364 | Msa1388930:CDS | 35.0% |
| TCTACACTAGCACGAAAAAA+TGG | + | tig0021200:31630-31649 | None:intergenic | 35.0% | |
| TATCTATGTCATGTGAACAG+TGG | - | tig0021200:31843-31862 | Msa1388930:intron | 35.0% | |
| ! | CATAACTTCTACTTTGGAGA+AGG | - | tig0021200:31981-32000 | Msa1388930:intron | 35.0% |
| TTCACTGTAAGCATCTTAGT+TGG | + | tig0021200:32026-32045 | None:intergenic | 35.0% | |
| !!! | CATAACCCTGCAACTTTTTT+CGG | - | tig0021200:32068-32087 | Msa1388930:intron | 35.0% |
| AAATGCCGAAAAAAGTTGCA+GGG | + | tig0021200:32076-32095 | None:intergenic | 35.0% | |
| TAAATGCCGAAAAAAGTTGC+AGG | + | tig0021200:32077-32096 | None:intergenic | 35.0% | |
| ATTAAGCTGTTCATCCAAAC+AGG | - | tig0021200:32444-32463 | Msa1388930:intron | 35.0% | |
| ! | CAAAAAAGTTCTAGCCTGTT+TGG | + | tig0021200:32461-32480 | None:intergenic | 35.0% |
| !!! | ACAGGCTAGAACTTTTTTGA+CGG | - | tig0021200:32462-32481 | Msa1388930:intron | 35.0% |
| !! | AGTTCAAAATTGGCCTTTGA+AGG | - | tig0021200:32710-32729 | Msa1388930:CDS | 35.0% |
| GTATATTGACAGACACTGTT+CGG | + | tig0021200:32845-32864 | None:intergenic | 35.0% | |
| ACAGTGTCTGTCAATATACA+AGG | - | tig0021200:32846-32865 | Msa1388930:CDS | 35.0% | |
| TGTCAATATACAAGGAAGCA+AGG | - | tig0021200:32854-32873 | Msa1388930:CDS | 35.0% | |
| !! | TTGATGTACTTGTTGTTGTG+GGG | + | tig0021200:33038-33057 | None:intergenic | 35.0% |
| !! | GTTTGATGTACTTGTTGTTG+TGG | + | tig0021200:33040-33059 | None:intergenic | 35.0% |
| AATGAACTGAAATAGCTCAC+AGG | + | tig0021200:33123-33142 | None:intergenic | 35.0% | |
| ! | GCTATTTCAGTTCATTCTAC+TGG | - | tig0021200:33127-33146 | Msa1388930:five_prime_UTR | 35.0% |
| !! | TGACAATTAAGAGGGTGTTT+AGG | - | tig0021200:33200-33219 | Msa1388930:five_prime_UTR | 35.0% |
| GAAGTGAAGAATTGGGATCA+TGG | + | tig0021200:29986-30005 | None:intergenic | 40.0% | |
| !!! | TTAGGGGTTTTGGGTTTTGA+AGG | + | tig0021200:30066-30085 | None:intergenic | 40.0% |
| !!! | GGGGTTTGTTTTTGTGATCT+TGG | + | tig0021200:30313-30332 | None:intergenic | 40.0% |
| AACAATGCAACCAAGTCCAA+TGG | - | tig0021200:30387-30406 | Msa1388930:CDS | 40.0% | |
| TGATGTGAAGGTGAATCCAT+TGG | + | tig0021200:30406-30425 | None:intergenic | 40.0% | |
| TCTTCAAGTAGAATCTCTGG+TGG | - | tig0021200:30454-30473 | Msa1388930:CDS | 40.0% | |
| GTGAATGATAAAGGGTGGAT+TGG | - | tig0021200:30517-30536 | Msa1388930:intron | 40.0% | |
| !! | TAAAGGGTGGATTGGATCTA+AGG | - | tig0021200:30525-30544 | Msa1388930:intron | 40.0% |
| !! | TGCTGTTTGTGGGTTTGTTT+TGG | - | tig0021200:30627-30646 | Msa1388930:intron | 40.0% |
| CACAAATGTGAAGCAATGCA+AGG | + | tig0021200:30734-30753 | None:intergenic | 40.0% | |
| AGACTGTTTGGGAAAGCTTA+TGG | + | tig0021200:30955-30974 | None:intergenic | 40.0% | |
| ! | GTTATTTAAGACAGCCCTCT+TGG | - | tig0021200:31150-31169 | Msa1388930:intron | 40.0% |
| ACATCATGCCAAATCCAAGA+GGG | + | tig0021200:31167-31186 | None:intergenic | 40.0% | |
| AACATCATGCCAAATCCAAG+AGG | + | tig0021200:31168-31187 | None:intergenic | 40.0% | |
| ! | TTTGGCATGATGTTTGAGAC+AGG | - | tig0021200:31174-31193 | Msa1388930:intron | 40.0% |
| ! | ACATGGATTGACGGTGAATT+TGG | - | tig0021200:31354-31373 | Msa1388930:CDS | 40.0% |
| TGAAGCTCCAAAGAGTAATG+TGG | + | tig0021200:31395-31414 | None:intergenic | 40.0% | |
| !! | TACTCTTTGGAGCTTCAAAG+AGG | - | tig0021200:31398-31417 | Msa1388930:intron | 40.0% |
| TGTTTGGATTGACTGAGAGT+TGG | + | tig0021200:31447-31466 | None:intergenic | 40.0% | |
| TTGCCTGTGTAGACTTATAG+TGG | - | tig0021200:31494-31513 | Msa1388930:intron | 40.0% | |
| CTACCACTATAAGTCTACAC+AGG | + | tig0021200:31500-31519 | None:intergenic | 40.0% | |
| TTTGCATAACCTGCTTTGTG+AGG | - | tig0021200:31548-31567 | Msa1388930:intron | 40.0% | |
| TTGCATAACCTGCTTTGTGA+GGG | - | tig0021200:31549-31568 | Msa1388930:intron | 40.0% | |
| GATTGCAATCTTGCCAATCA+CGG | - | tig0021200:31648-31667 | Msa1388930:intron | 40.0% | |
| ATTGCAATCTTGCCAATCAC+GGG | - | tig0021200:31649-31668 | Msa1388930:intron | 40.0% | |
| TGTTAGAATACTTACCTCGC+CGG | + | tig0021200:32150-32169 | None:intergenic | 40.0% | |
| TAAGCTATCATAAGCTGTCC+TGG | + | tig0021200:32324-32343 | None:intergenic | 40.0% | |
| !! | AAAATTGGCCTTTGAAGGAG+TGG | - | tig0021200:32715-32734 | Msa1388930:CDS | 40.0% |
| CATTTAAGCCACTCCTTCAA+AGG | + | tig0021200:32726-32745 | None:intergenic | 40.0% | |
| TTTCTTCAACTGCAGCAACA+TGG | + | tig0021200:32799-32818 | None:intergenic | 40.0% | |
| !! | TGATGTACTTGTTGTTGTGG+GGG | + | tig0021200:33037-33056 | None:intergenic | 40.0% |
| GAATTGGGATCATGGGAAAG+TGG | + | tig0021200:29978-29997 | None:intergenic | 45.0% | |
| GAATGAAGAGAGGTGAGAAG+TGG | + | tig0021200:30019-30038 | None:intergenic | 45.0% | |
| !! | TGTGGGTTGGGATGAGAATT+TGG | + | tig0021200:30138-30157 | None:intergenic | 45.0% |
| GAAGGTGAATCCATTGGACT+TGG | + | tig0021200:30400-30419 | None:intergenic | 45.0% | |
| GTGATCGAAATGGAGTTTCG+AGG | - | tig0021200:30587-30606 | Msa1388930:intron | 45.0% | |
| ATCGAAATGGAGTTTCGAGG+AGG | - | tig0021200:30590-30609 | Msa1388930:intron | 45.0% | |
| TCGAAATGGAGTTTCGAGGA+GGG | - | tig0021200:30591-30610 | Msa1388930:intron | 45.0% | |
| TATACCTTGACACTGAGCTG+AGG | + | tig0021200:30703-30722 | None:intergenic | 45.0% | |
| TAAGACAGCCCTCTTGGATT+TGG | - | tig0021200:31156-31175 | Msa1388930:intron | 45.0% | |
| !!! | CTATTTTTGCGACCCGTGAT+TGG | + | tig0021200:31664-31683 | None:intergenic | 45.0% |
| TCTGATCTTACAGTTGCGAC+CGG | - | tig0021200:32128-32147 | Msa1388930:intron | 45.0% | |
| CTTATGTCTGTAAGCTCACC+AGG | - | tig0021200:32303-32322 | Msa1388930:intron | 45.0% | |
| TATTGACAGACACTGTTCGG+CGG | + | tig0021200:32842-32861 | None:intergenic | 45.0% | |
| GGAAGCAAGGTTCCATTGTA+TGG | - | tig0021200:32867-32886 | Msa1388930:CDS | 45.0% | |
| !! | GTCTTTGAAGTTAAGTCGCG+CGG | - | tig0021200:32945-32964 | Msa1388930:CDS | 45.0% |
| CGGAAATGTTGTAGGCAAGT+TGG | - | tig0021200:32965-32984 | Msa1388930:CDS | 45.0% | |
| !! | ATGTTGTAGGCAAGTTGGTG+AGG | - | tig0021200:32970-32989 | Msa1388930:CDS | 45.0% |
| GGTGAGAAGTGGAGTTGAAG+AGG | + | tig0021200:30008-30027 | None:intergenic | 50.0% | |
| CAAACCTCAGCTCAGTGTCA+AGG | - | tig0021200:30696-30715 | Msa1388930:intron | 50.0% | |
| CAGCGTGCCACATTACTCTT+TGG | - | tig0021200:31385-31404 | Msa1388930:intron | 50.0% | |
| CAATCCAAACATGCACCGAG+TGG | - | tig0021200:31456-31475 | Msa1388930:intron | 50.0% | |
| !! | TACACCACTCGGTGCATGTT+TGG | + | tig0021200:31463-31482 | None:intergenic | 50.0% |
| ATACAACGCCCTCACAAAGC+AGG | + | tig0021200:31560-31579 | None:intergenic | 50.0% | |
| !! | TGCTTTGTGAGGGCGTTGTA+TGG | - | tig0021200:31559-31578 | Msa1388930:intron | 50.0% |
| AAGGTTCCATTGTATGGCGC+TGG | - | tig0021200:32873-32892 | Msa1388930:CDS | 50.0% | |
| TGGTGCAGATGTTGCTAGCT+CGG | - | tig0021200:32893-32912 | Msa1388930:CDS | 50.0% | |
| ! | GTTGCTAGCTCGGTGAACAA+CGG | - | tig0021200:32903-32922 | Msa1388930:CDS | 50.0% |
| AAGTCGCGCGGAAATGTTGT+AGG | - | tig0021200:32957-32976 | Msa1388930:CDS | 50.0% | |
| !! | CTTGTTGTTGTGGGGGTCAA+CGG | + | tig0021200:33030-33049 | None:intergenic | 50.0% |
| TCTGCACCAGCGCCATACAA+TGG | + | tig0021200:32882-32901 | None:intergenic | 55.0% | |
| GGAGAAGGGTCAGACGTCAC+TGG | - | tig0021200:31996-32015 | Msa1388930:intron | 60.0% | |
| TCTTACAGTTGCGACCGGCG+AGG | - | tig0021200:32133-32152 | Msa1388930:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0021200 | gene | 29968 | 33375 | 29968 | ID=Msa1388930;Name=Msa1388930 |
| tig0021200 | mRNA | 29968 | 33375 | 29968 | ID=Msa1388930-mRNA-1;Parent=Msa1388930;Name=Msa1388930-mRNA-1;_AED=0.09;_eAED=0.09;_QI=294|1|1|1|1|1|3|284|307 |
| tig0021200 | exon | 29968 | 30533 | 29968 | ID=Msa1388930-mRNA-1:exon:11417;Parent=Msa1388930-mRNA-1 |
| tig0021200 | exon | 31189 | 31374 | 31189 | ID=Msa1388930-mRNA-1:exon:11416;Parent=Msa1388930-mRNA-1 |
| tig0021200 | exon | 32626 | 33375 | 32626 | ID=Msa1388930-mRNA-1:exon:11415;Parent=Msa1388930-mRNA-1 |
| tig0021200 | five_prime_UTR | 33082 | 33375 | 33082 | ID=Msa1388930-mRNA-1:five_prime_utr;Parent=Msa1388930-mRNA-1 |
| tig0021200 | CDS | 32626 | 33081 | 32626 | ID=Msa1388930-mRNA-1:cds;Parent=Msa1388930-mRNA-1 |
| tig0021200 | CDS | 31189 | 31374 | 31189 | ID=Msa1388930-mRNA-1:cds;Parent=Msa1388930-mRNA-1 |
| tig0021200 | CDS | 30252 | 30533 | 30252 | ID=Msa1388930-mRNA-1:cds;Parent=Msa1388930-mRNA-1 |
| tig0021200 | three_prime_UTR | 29968 | 30251 | 29968 | ID=Msa1388930-mRNA-1:three_prime_utr;Parent=Msa1388930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
