AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1172630

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1172630 MtrunA17_Chr4g0042501 90.071 423 16 7 1 410 1 410 0.0 732
Msa1172630 MtrunA17_Chr5g0417621 55.044 456 139 21 1 427 23 441 1.11e-139 406
Msa1172630 MtrunA17_Chr7g0254261 77.444 133 30 0 81 213 69 201 2.51e-70 226
Msa1172630 MtrunA17_Chr3g0125801 63.314 169 53 4 96 263 11 171 2.47e-62 203
Msa1172630 MtrunA17_Chr6g0480581 74.107 112 29 0 98 209 1 112 1.21e-58 192
Msa1172630 MtrunA17_Chr6g0460671 68.333 120 38 0 94 213 92 211 8.31e-56 188
Msa1172630 MtrunA17_Chr6g0460661 58.407 113 47 0 100 212 15 127 1.45e-44 152
Msa1172630 MtrunA17_Chr4g0008551 57.843 102 43 0 100 201 37 138 2.81e-38 141
Msa1172630 MtrunA17_Chr5g0401731 50.420 119 53 1 83 201 3 115 3.92e-38 140
Msa1172630 MtrunA17_Chr4g0053431 58.416 101 42 0 101 201 5 105 2.17e-37 137
Msa1172630 MtrunA17_Chr6g0454921 53.465 101 47 0 101 201 15 115 1.89e-34 127
Msa1172630 MtrunA17_Chr3g0133601 55.446 101 45 0 101 201 37 137 1.28e-33 125
Msa1172630 MtrunA17_Chr7g0238631 56.311 103 45 0 100 202 112 214 1.40e-33 132
Msa1172630 MtrunA17_Chr5g0429661 43.885 139 73 2 82 220 103 236 9.71e-32 124
Msa1172630 MtrunA17_Chr1g0157731 51.456 103 50 0 100 202 90 192 8.20e-31 125
Msa1172630 MtrunA17_Chr5g0437321 51.042 96 47 0 100 195 18 113 2.48e-30 118
Msa1172630 MtrunA17_Chr3g0139671 50.000 102 51 0 101 202 85 186 3.20e-30 123
Msa1172630 MtrunA17_Chr4g0058991 44.094 127 69 1 98 222 206 332 1.15e-28 117
Msa1172630 MtrunA17_Chr3g0103281 48.039 102 52 1 101 201 14 115 4.25e-27 110
Msa1172630 MtrunA17_Chr1g0187761 39.098 133 78 2 101 231 14 145 1.48e-26 107
Msa1172630 MtrunA17_Chr3g0117511 43.548 124 68 1 101 222 183 306 1.59e-26 110
Msa1172630 MtrunA17_Chr2g0323351 46.018 113 58 2 101 211 14 125 3.01e-26 106
Msa1172630 MtrunA17_Chr5g0397841 52.747 91 43 0 104 194 113 203 4.72e-26 109
Msa1172630 MtrunA17_Chr4g0022911 39.634 164 77 5 101 256 15 164 9.15e-26 106
Msa1172630 MtrunA17_Chr4g0055981 44.118 102 56 1 101 201 57 158 1.41e-25 103
Msa1172630 MtrunA17_Chr4g0022901 48.544 103 50 2 101 201 15 116 4.63e-25 103
Msa1172630 MtrunA17_Chr2g0309911 46.729 107 54 2 101 205 13 118 4.77e-25 104
Msa1172630 MtrunA17_Chr7g0228531 40.411 146 76 4 59 201 182 319 9.46e-25 105
Msa1172630 MtrunA17_Chr1g0203411 33.908 174 97 3 101 257 14 186 1.03e-24 103
Msa1172630 MtrunA17_Chr8g0342541 45.217 115 55 3 94 201 2 115 1.67e-24 103
Msa1172630 MtrunA17_Chr5g0417821 46.078 102 54 1 101 201 9 110 2.00e-24 102
Msa1172630 MtrunA17_Chr4g0030881 42.975 121 60 3 97 209 5 124 2.22e-24 101
Msa1172630 MtrunA17_Chr3g0099131 44.762 105 57 1 101 204 43 147 2.53e-24 105
Msa1172630 MtrunA17_Chr6g0470971 44.118 102 56 1 101 201 16 117 2.71e-24 101
Msa1172630 MtrunA17_Chr7g0274581 44.762 105 57 1 101 204 14 118 3.02e-24 99.8
Msa1172630 MtrunA17_Chr2g0311221 48.980 98 49 1 99 195 14 111 3.58e-24 102
Msa1172630 MtrunA17_Chr3g0115821 48.544 103 50 2 101 201 14 115 4.26e-24 102
Msa1172630 MtrunA17_Chr4g0022931 47.573 103 51 2 101 201 15 116 4.44e-24 100
Msa1172630 MtrunA17_Chr8g0360111 46.000 100 53 1 101 199 27 126 6.96e-24 100
Msa1172630 MtrunA17_Chr5g0434911 43.137 102 57 1 101 201 23 124 8.59e-24 100
Msa1172630 MtrunA17_Chr8g0342521 44.348 115 56 3 94 201 2 115 9.83e-24 101
Msa1172630 MtrunA17_Chr1g0203441 44.118 102 56 1 101 201 15 116 1.11e-23 99.8
Msa1172630 MtrunA17_Chr7g0220341 38.655 119 70 1 86 201 12 130 1.41e-23 99.8
Msa1172630 MtrunA17_Chr7g0270891 42.453 106 60 1 101 205 14 119 1.43e-23 101
Msa1172630 MtrunA17_Chr1g0193371 43.396 106 57 2 101 204 14 118 1.51e-23 101
Msa1172630 MtrunA17_Chr4g0048511 48.039 102 52 1 101 201 15 116 1.52e-23 101
Msa1172630 MtrunA17_Chr1g0211161 43.925 107 57 2 101 205 15 120 1.57e-23 98.2
Msa1172630 MtrunA17_Chr2g0330041 45.217 115 55 3 94 201 2 115 1.63e-23 101
Msa1172630 MtrunA17_Chr4g0070611 41.026 117 63 2 94 204 2 118 2.15e-23 99.8
Msa1172630 MtrunA17_Chr8g0342481 45.217 115 56 2 94 201 2 116 2.82e-23 100
Msa1172630 MtrunA17_Chr5g0434831 43.137 102 57 1 101 201 9 110 2.86e-23 96.7
Msa1172630 MtrunA17_Chr5g0434841 43.137 102 57 1 101 201 22 123 2.96e-23 99.8
Msa1172630 MtrunA17_Chr4g0070641 41.026 117 63 2 94 204 2 118 3.22e-23 95.9
Msa1172630 MtrunA17_Chr5g0395281 34.759 187 106 6 101 278 14 193 3.39e-23 99.4
Msa1172630 MtrunA17_Chr3g0117091 43.925 107 57 2 101 205 14 119 3.65e-23 99.8
Msa1172630 MtrunA17_Chr8g0387421 43.396 106 59 1 101 205 14 119 3.95e-23 99.4
Msa1172630 MtrunA17_Chr5g0397231 45.794 107 52 2 94 194 2 108 4.22e-23 99.8
Msa1172630 MtrunA17_Chr7g0228991 42.157 102 58 1 101 201 31 132 5.02e-23 98.2
Msa1172630 MtrunA17_Chr1g0209661 36.765 136 77 2 101 227 29 164 5.25e-23 99.0
Msa1172630 MtrunA17_Chr2g0328771 43.636 110 59 2 101 208 22 130 5.57e-23 99.0
Msa1172630 MtrunA17_Chr8g0354661 41.129 124 70 2 98 219 36 158 5.67e-23 101
Msa1172630 MtrunA17_Chr1g0193801 41.509 106 61 1 101 205 14 119 7.10e-23 99.8
Msa1172630 MtrunA17_Chr2g0327821 42.991 107 58 2 101 205 8 113 7.32e-23 96.7
Msa1172630 MtrunA17_Chr5g0400821 34.416 154 89 4 101 248 14 161 7.39e-23 98.2
Msa1172630 MtrunA17_Chr4g0058631 41.509 106 61 1 101 205 14 119 7.69e-23 99.4
Msa1172630 MtrunA17_Chr8g0343831 40.566 106 62 1 101 205 10 115 8.66e-23 97.1
Msa1172630 MtrunA17_Chr7g0228891 44.340 106 56 2 100 203 13 117 9.18e-23 97.4
Msa1172630 MtrunA17_Chr2g0281071 45.631 103 55 1 100 201 14 116 9.28e-23 98.6
Msa1172630 MtrunA17_Chr5g0410961 42.105 114 60 2 94 201 2 115 1.02e-22 98.6
Msa1172630 MtrunA17_Chr2g0323411 47.059 102 53 1 101 201 14 115 1.11e-22 98.2
Msa1172630 MtrunA17_Chr4g0022891 38.655 119 65 3 101 212 14 131 1.15e-22 96.3
Msa1172630 MtrunA17_Chr7g0228481 38.406 138 80 2 59 196 182 314 1.23e-22 99.4
Msa1172630 MtrunA17_Chr5g0435101 45.192 104 54 2 101 202 13 115 1.39e-22 95.1
Msa1172630 MtrunA17_Chr5g0434931 41.176 102 59 1 101 201 37 138 1.83e-22 96.7
Msa1172630 MtrunA17_Chr4g0032401 42.056 107 61 1 101 206 19 125 2.65e-22 97.1
Msa1172630 MtrunA17_Chr3g0080861 41.463 123 67 3 83 203 23 142 3.09e-22 99.0
Msa1172630 MtrunA17_Chr1g0167691 36.765 136 79 3 101 230 14 148 3.12e-22 95.5
Msa1172630 MtrunA17_Chr3g0088461 40.336 119 70 1 86 203 9 127 3.56e-22 97.1
Msa1172630 MtrunA17_Chr7g0271241 46.392 97 49 2 101 195 14 109 4.16e-22 97.4
Msa1172630 MtrunA17_Chr1g0154031 45.045 111 58 2 101 209 78 187 4.22e-22 97.8
Msa1172630 MtrunA17_Chr1g0152011 31.250 176 98 4 101 253 14 189 4.37e-22 96.7
Msa1172630 MtrunA17_Chr4g0039971 44.340 106 56 2 101 204 15 119 6.47e-22 96.3
Msa1172630 MtrunA17_Chr1g0177901 30.151 199 114 3 112 296 5 192 8.16e-22 93.2
Msa1172630 MtrunA17_Chr1g0180391 40.171 117 67 2 95 209 15 130 8.87e-22 93.6
Msa1172630 MtrunA17_Chr6g0452271 44.118 102 56 1 101 201 14 115 9.91e-22 95.5
Msa1172630 MtrunA17_Chr1g0192411 40.385 104 61 1 101 203 14 117 1.26e-21 96.3
Msa1172630 MtrunA17_Chr7g0228401 48.810 84 43 0 112 195 290 373 1.48e-21 96.7
Msa1172630 MtrunA17_Chr4g0037141 40.517 116 61 3 94 202 2 116 1.60e-21 94.0
Msa1172630 MtrunA17_Chr3g0131121 39.669 121 69 3 101 218 14 133 1.99e-21 94.0
Msa1172630 MtrunA17_Chr1g0186061 40.909 110 62 2 101 208 22 130 5.20e-21 92.0
Msa1172630 MtrunA17_Chr3g0121241 39.623 106 63 1 101 205 44 149 5.35e-21 92.8
Msa1172630 MtrunA17_Chr4g0022881 40.196 102 58 2 101 200 14 114 7.22e-21 90.9
Msa1172630 MtrunA17_Chr8g0334881 48.958 96 47 2 101 194 12 107 8.55e-21 92.4
Msa1172630 MtrunA17_Chr2g0322521 41.481 135 72 3 71 203 5 134 9.26e-21 93.6
Msa1172630 MtrunA17_Chr4g0028311 44.660 103 55 2 101 201 14 116 1.02e-20 92.4
Msa1172630 MtrunA17_Chr1g0194301 36.667 120 73 2 87 204 21 139 1.09e-20 91.7
Msa1172630 MtrunA17_Chr4g0054391 39.062 128 70 3 101 220 14 141 1.35e-20 91.7
Msa1172630 MtrunA17_Chr7g0261281 43.689 103 55 2 101 201 14 115 1.42e-20 91.3
Msa1172630 MtrunA17_Chr1g0168661 43.689 103 55 2 101 201 23 124 1.42e-20 90.9
Msa1172630 MtrunA17_Chr7g0217221 40.000 105 62 1 101 204 14 118 1.68e-20 90.9
Msa1172630 MtrunA17_Chr1g0167661 42.718 103 56 2 101 201 14 115 2.07e-20 90.1
Msa1172630 MtrunA17_Chr1g0194291 31.977 172 98 5 87 255 13 168 2.24e-20 90.5
Msa1172630 MtrunA17_Chr8g0385321 39.474 114 63 2 94 201 2 115 2.37e-20 91.3
Msa1172630 MtrunA17_Chr8g0346561 38.596 114 64 2 94 201 2 115 2.58e-20 90.9
Msa1172630 MtrunA17_Chr3g0135311 35.664 143 81 4 101 232 14 156 3.00e-20 91.3
Msa1172630 MtrunA17_Chr1g0151941 42.718 103 57 2 101 201 14 116 3.47e-20 89.4
Msa1172630 MtrunA17_Chr1g0194951 41.739 115 59 3 94 201 2 115 3.64e-20 91.7
Msa1172630 MtrunA17_Chr7g0275911 38.679 106 64 1 101 205 14 119 4.28e-20 89.4
Msa1172630 MtrunA17_Chr7g0264641 42.718 103 57 2 101 201 14 116 4.30e-20 89.7
Msa1172630 MtrunA17_Chr4g0060721 41.818 110 62 2 101 208 15 124 4.59e-20 90.9
Msa1172630 MtrunA17_Chr7g0240821 43.000 100 54 2 104 201 6 104 5.33e-20 88.6
Msa1172630 MtrunA17_Chr2g0327351 44.898 98 52 2 101 196 14 111 6.62e-20 90.1
Msa1172630 MtrunA17_Chr4g0044421 40.196 102 60 1 101 201 14 115 1.42e-19 86.3
Msa1172630 MtrunA17_Chr4g0013361 43.590 117 61 3 89 203 3 116 1.45e-19 88.6
Msa1172630 MtrunA17_Chr5g0441131 39.252 107 62 3 100 204 10 115 1.68e-19 85.9
Msa1172630 MtrunA17_Chr7g0228231 35.897 117 74 1 89 204 4 120 2.29e-19 86.3
Msa1172630 MtrunA17_Chr4g0042671 39.130 115 64 2 94 202 2 116 2.54e-19 89.4
Msa1172630 MtrunA17_Chr6g0453471 40.777 103 60 1 101 202 14 116 2.90e-19 88.6
Msa1172630 MtrunA17_Chr3g0092401 40.000 105 62 1 101 204 15 119 3.04e-19 87.8
Msa1172630 MtrunA17_Chr7g0217741 42.718 103 56 2 101 201 14 115 3.72e-19 87.8
Msa1172630 MtrunA17_Chr6g0453211 42.268 97 55 1 101 196 14 110 4.10e-19 87.8
Msa1172630 MtrunA17_Chr7g0233061 35.606 132 79 4 79 207 159 287 5.16e-19 88.2
Msa1172630 MtrunA17_Chr5g0416341 34.286 105 69 0 104 208 29 133 6.12e-19 88.6
Msa1172630 MtrunA17_Chr3g0110351 41.509 106 59 2 101 204 14 118 6.58e-19 87.0
Msa1172630 MtrunA17_Chr5g0440781 42.056 107 55 4 100 203 13 115 6.65e-19 84.3
Msa1172630 MtrunA17_Chr4g0057031 41.346 104 58 2 101 202 14 116 7.43e-19 86.3
Msa1172630 MtrunA17_Chr6g0450101 35.542 166 98 4 101 264 16 174 8.33e-19 84.7
Msa1172630 MtrunA17_Chr5g0440761 40.952 105 57 3 101 203 14 115 8.75e-19 85.9
Msa1172630 MtrunA17_Chr5g0441141 40.952 105 57 3 101 203 14 115 9.82e-19 85.9
Msa1172630 MtrunA17_Chr8g0349261 44.231 104 54 3 101 201 15 117 9.92e-19 86.3
Msa1172630 MtrunA17_Chr5g0434571 41.509 106 59 2 101 204 50 154 1.61e-18 86.7
Msa1172630 MtrunA17_Chr7g0254411 39.450 109 65 1 101 208 14 122 1.62e-18 86.3
Msa1172630 MtrunA17_Chr7g0247131 49.367 79 38 1 127 203 5 83 2.50e-18 84.7
Msa1172630 MtrunA17_Chr5g0434901 50.000 62 31 0 134 195 9 70 7.76e-18 79.3
Msa1172630 MtrunA17_Chr4g0068061 38.235 102 62 1 101 201 14 115 1.64e-17 83.2
Msa1172630 MtrunA17_Chr4g0068921 39.316 117 66 2 81 196 10 122 1.79e-17 80.5
Msa1172630 MtrunA17_Chr4g0072751 40.816 98 56 2 101 196 14 111 1.95e-17 83.2
Msa1172630 MtrunA17_Chr8g0362231 29.333 150 99 2 104 251 25 169 2.35e-17 84.0
Msa1172630 MtrunA17_Chr3g0099141 43.902 82 45 1 101 181 42 123 6.47e-17 77.4
Msa1172630 MtrunA17_Chr7g0238651 30.178 169 105 4 101 264 7 167 7.04e-17 81.6
Msa1172630 MtrunA17_Chr2g0293911 36.090 133 78 2 73 204 4 130 1.17e-16 80.5
Msa1172630 MtrunA17_Chr6g0487491 39.286 112 58 3 101 202 14 125 9.06e-16 77.0
Msa1172630 MtrunA17_Chr7g0229101 51.613 62 30 0 134 195 8 69 1.16e-15 75.5
Msa1172630 MtrunA17_Chr7g0229131 44.776 67 37 0 134 200 8 74 1.37e-14 71.6
Msa1172630 MtrunA17_Chr8g0342511 42.529 87 42 3 94 173 2 87 1.84e-14 68.9
Msa1172630 MtrunA17_Chr5g0395221 45.333 75 40 1 101 174 14 88 2.30e-14 68.6
Msa1172630 MtrunA17_Chr7g0269831 41.748 103 57 2 101 201 14 115 3.70e-14 73.6
Msa1172630 MtrunA17_Chr3g0093811 43.056 72 39 2 134 204 18 88 7.98e-14 71.2
Msa1172630 MtrunA17_Chr5g0425591 40.741 81 46 2 101 179 11 91 1.80e-13 66.2
Msa1172630 MtrunA17_Chr6g0483051 36.264 91 57 1 104 194 72 161 2.86e-13 71.6
Msa1172630 MtrunA17_Chr2g0323321 41.250 80 44 2 101 178 13 91 3.39e-13 65.9
Msa1172630 MtrunA17_Chr8g0342531 44.156 77 40 2 101 175 14 89 3.55e-13 67.4
Msa1172630 MtrunA17_Chr4g0042611 41.333 75 43 1 101 174 14 88 4.83e-13 64.7
Msa1172630 MtrunA17_Chr8g0342461 44.156 77 41 1 101 175 14 90 1.45e-12 65.1
Msa1172630 MtrunA17_Chr8g0342471 40.000 90 45 4 94 175 2 90 2.77e-12 63.9
Msa1172630 MtrunA17_Chr3g0104501 56.863 51 22 0 101 151 133 183 9.14e-12 63.9
Msa1172630 MtrunA17_Chr5g0421201 50.000 50 25 0 153 202 12 61 1.26e-11 63.2
Msa1172630 MtrunA17_Chr7g0233151 43.137 51 29 0 151 201 1 51 8.59e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1172630 AT1G69560.1 77.397 146 25 2 76 213 74 219 7.00e-77 242
Msa1172630 AT1G69560.2 77.397 146 25 2 76 213 90 235 1.06e-76 242
Msa1172630 AT1G26780.1 88.034 117 14 0 98 214 95 211 4.75e-74 233
Msa1172630 AT1G26780.2 88.034 117 14 0 98 214 95 211 2.80e-73 234
Msa1172630 AT3G29020.1 75.214 117 29 0 96 212 60 176 5.02e-64 206
Msa1172630 AT3G29020.2 75.214 117 29 0 96 212 62 178 2.22e-63 206
Msa1172630 AT5G17800.1 79.817 109 22 0 96 204 88 196 1.28e-61 202
Msa1172630 AT1G17950.1 75.455 110 27 0 98 207 2 111 2.59e-59 194
Msa1172630 AT1G73410.1 77.982 109 24 0 98 206 3 111 4.23e-56 186
Msa1172630 AT1G73410.2 77.273 110 25 0 98 207 3 112 1.25e-55 183
Msa1172630 AT4G33450.1 61.832 131 50 0 99 229 17 147 1.40e-54 182
Msa1172630 AT5G39700.1 64.486 107 38 0 102 208 57 163 1.32e-46 159
Msa1172630 AT2G39880.1 45.783 166 70 3 94 241 45 208 7.50e-38 141
Msa1172630 AT5G67300.1 48.276 145 70 2 101 244 6 146 1.09e-37 139
Msa1172630 AT3G55730.1 57.282 103 44 0 100 202 55 157 8.75e-37 139
Msa1172630 AT4G37260.1 57.426 101 43 0 101 201 13 113 1.76e-36 136
Msa1172630 AT2G23290.1 55.446 101 45 0 101 201 13 113 6.02e-35 132
Msa1172630 AT3G50060.1 54.902 102 46 0 100 201 5 106 6.20e-34 129
Msa1172630 AT3G09230.1 52.427 103 49 0 100 202 54 156 1.30e-33 130
Msa1172630 AT3G09370.1 55.446 101 45 0 101 201 130 230 1.05e-32 129
Msa1172630 AT3G09370.2 55.446 101 45 0 101 201 135 235 1.05e-32 129
Msa1172630 AT3G09370.3 55.446 101 45 0 101 201 143 243 1.82e-32 129
Msa1172630 AT5G02320.1 53.922 102 47 0 100 201 126 227 1.16e-31 127
Msa1172630 AT5G02320.2 53.922 102 47 0 100 201 126 227 1.16e-31 127
Msa1172630 AT5G02320.3 53.922 102 47 0 100 201 66 167 1.46e-31 126
Msa1172630 AT5G58850.1 48.333 120 59 1 96 215 100 216 3.14e-30 121
Msa1172630 AT5G11050.1 47.899 119 59 1 97 215 101 216 2.57e-29 119
Msa1172630 AT5G11510.3 48.039 102 53 0 100 201 80 181 2.60e-29 121
Msa1172630 AT5G11510.1 48.039 102 53 0 100 201 80 181 2.60e-29 121
Msa1172630 AT5G11510.4 48.039 102 53 0 100 201 80 181 2.60e-29 121
Msa1172630 AT5G11510.2 48.039 102 53 0 100 201 80 181 3.30e-29 120
Msa1172630 AT5G11510.5 48.039 102 53 0 100 201 80 181 3.62e-29 120
Msa1172630 AT4G32730.5 47.573 103 54 0 100 202 86 188 7.60e-29 120
Msa1172630 AT4G32730.4 47.573 103 54 0 100 202 86 188 7.60e-29 120
Msa1172630 AT4G32730.3 47.573 103 54 0 100 202 86 188 7.60e-29 120
Msa1172630 AT4G32730.2 47.573 103 54 0 100 202 86 188 7.60e-29 120
Msa1172630 AT4G32730.1 47.573 103 54 0 100 202 86 188 8.76e-29 119
Msa1172630 AT2G25230.1 48.515 101 50 2 101 200 26 125 1.49e-28 112
Msa1172630 AT3G27785.1 44.444 108 60 0 101 208 189 296 2.32e-27 113
Msa1172630 AT5G40360.1 36.601 153 90 3 93 238 148 300 2.77e-27 112
Msa1172630 AT5G40330.1 46.078 102 54 1 101 201 14 115 1.20e-26 107
Msa1172630 AT3G12720.1 48.598 107 52 2 101 205 24 129 1.74e-26 108
Msa1172630 AT4G18770.1 42.400 125 70 1 100 222 216 340 8.13e-26 108
Msa1172630 AT3G28470.1 50.526 95 46 1 101 194 14 108 1.67e-25 106
Msa1172630 AT4G28110.1 44.737 114 57 2 94 201 2 115 1.71e-25 105
Msa1172630 AT5G14750.1 43.689 103 57 1 100 201 17 119 2.25e-25 103
Msa1172630 AT4G25560.1 44.444 108 59 1 101 207 12 119 4.53e-25 104
Msa1172630 AT1G63910.1 42.857 126 66 2 94 213 2 127 4.64e-25 105
Msa1172630 AT3G11440.2 38.571 140 84 2 65 203 8 146 1.00e-24 106
Msa1172630 AT5G54230.1 46.154 104 55 1 99 201 12 115 1.28e-24 103
Msa1172630 AT1G79180.1 46.296 108 55 2 101 206 16 122 1.32e-24 103
Msa1172630 AT3G11440.3 38.571 140 84 2 65 203 8 146 1.55e-24 106
Msa1172630 AT3G11440.4 38.571 140 84 2 65 203 8 146 1.55e-24 106
Msa1172630 AT3G11440.1 38.571 140 84 2 65 203 8 146 1.55e-24 106
Msa1172630 AT3G27920.1 43.137 102 57 1 101 201 16 117 2.03e-24 101
Msa1172630 AT5G65230.1 48.544 103 50 2 101 201 14 115 2.69e-24 102
Msa1172630 AT4G05100.1 47.059 102 53 1 101 201 15 116 3.69e-24 102
Msa1172630 AT3G30210.1 39.062 128 72 3 99 224 27 150 5.22e-24 101
Msa1172630 AT3G53200.1 42.735 117 64 2 91 205 1 116 6.28e-24 100
Msa1172630 AT5G60890.1 43.396 106 59 1 101 205 14 119 7.46e-24 101
Msa1172630 AT2G26950.1 42.857 112 52 3 97 203 14 118 8.46e-24 102
Msa1172630 AT1G09540.1 38.129 139 76 3 101 237 14 144 1.24e-23 102
Msa1172630 AT4G26930.1 43.750 112 62 1 94 204 14 125 1.30e-23 102
Msa1172630 AT2G26960.1 42.373 118 67 1 87 203 8 125 1.49e-23 102
Msa1172630 AT3G23250.1 42.857 105 59 1 101 204 14 118 2.36e-23 99.8
Msa1172630 AT5G56110.1 45.631 103 55 1 101 202 14 116 2.57e-23 100
Msa1172630 AT5G52600.1 44.231 104 57 1 99 201 12 115 3.04e-23 97.1
Msa1172630 AT5G12870.1 41.739 115 66 1 93 206 12 126 3.96e-23 99.0
Msa1172630 AT4G01680.3 43.269 104 58 1 101 203 14 117 4.51e-23 97.8
Msa1172630 AT4G01680.1 43.269 104 58 1 101 203 14 117 5.31e-23 99.8
Msa1172630 AT3G48920.1 45.833 96 51 1 101 195 20 115 5.75e-23 97.8
Msa1172630 AT5G10280.1 45.283 106 55 2 99 202 12 116 6.09e-23 99.4
Msa1172630 AT1G18570.1 44.118 102 56 1 101 201 15 116 7.72e-23 99.4
Msa1172630 AT4G17785.1 43.697 119 64 2 88 204 2 119 8.00e-23 99.4
Msa1172630 AT1G56160.1 45.631 103 53 2 101 201 16 117 8.08e-23 98.2
Msa1172630 AT4G17785.2 43.697 119 64 2 88 204 2 119 8.26e-23 99.4
Msa1172630 AT5G40430.1 41.176 102 59 1 99 200 52 152 8.63e-23 97.4
Msa1172630 AT3G13890.2 42.982 114 59 2 94 201 2 115 8.93e-23 99.4
Msa1172630 AT5G14340.1 44.762 105 55 2 101 203 26 129 8.95e-23 97.8
Msa1172630 AT3G46130.1 43.925 107 57 2 101 205 11 116 9.43e-23 97.4
Msa1172630 AT1G57560.1 42.991 107 58 2 101 205 14 119 1.06e-22 98.2
Msa1172630 AT1G57560.2 42.991 107 58 2 101 205 14 119 1.10e-22 97.4
Msa1172630 AT5G59780.3 42.593 108 59 2 101 206 10 116 1.10e-22 96.7
Msa1172630 AT5G26660.1 43.925 107 57 2 101 205 14 119 1.45e-22 98.6
Msa1172630 AT5G06100.1 43.243 111 60 2 94 203 29 137 1.83e-22 99.8
Msa1172630 AT4G00540.2 44.860 107 56 1 101 204 103 209 1.99e-22 99.0
Msa1172630 AT5G61420.2 44.340 106 58 1 101 205 14 119 2.17e-22 98.2
Msa1172630 AT1G35515.1 39.474 114 63 2 94 201 2 115 2.31e-22 95.1
Msa1172630 AT5G06100.5 43.243 111 60 2 94 203 29 137 2.81e-22 99.4
Msa1172630 AT5G06100.2 43.243 111 60 2 94 203 29 137 2.81e-22 99.4
Msa1172630 AT5G06100.3 43.243 111 60 2 94 203 29 137 2.81e-22 99.4
Msa1172630 AT5G06100.4 43.243 111 60 2 94 203 29 137 2.81e-22 99.4
Msa1172630 AT1G22640.1 35.976 164 88 6 94 246 2 159 3.57e-22 95.5
Msa1172630 AT1G74080.1 45.545 101 54 1 101 200 14 114 3.71e-22 97.1
Msa1172630 AT3G12820.1 45.631 103 53 2 101 201 16 117 3.97e-22 95.1
Msa1172630 AT4G00540.1 44.860 107 56 1 101 204 101 207 4.23e-22 98.2
Msa1172630 AT2G31180.1 45.631 103 53 2 101 201 14 115 4.57e-22 95.1
Msa1172630 AT2G32460.1 40.833 120 68 2 101 218 20 138 4.73e-22 98.6
Msa1172630 AT3G13890.1 40.650 123 58 3 94 201 2 124 5.35e-22 97.1
Msa1172630 AT2G32460.2 40.833 120 68 2 101 218 8 126 5.70e-22 98.2
Msa1172630 AT4G21440.1 46.078 102 54 1 101 201 14 115 7.75e-22 96.7
Msa1172630 AT2G47190.1 32.903 155 90 3 73 226 2 143 8.91e-22 94.7
Msa1172630 AT1G16490.1 45.631 103 53 2 101 201 16 117 9.34e-22 94.7
Msa1172630 AT4G09460.1 33.784 148 83 4 94 234 2 141 9.81e-22 94.0
Msa1172630 AT4G01680.2 40.517 116 56 2 101 203 14 129 1.21e-21 95.9
Msa1172630 AT1G34670.1 44.118 102 56 1 101 201 14 115 1.26e-21 96.3
Msa1172630 AT4G38620.1 40.517 116 61 3 94 202 2 116 1.48e-21 94.4
Msa1172630 AT2G02820.1 37.615 109 68 0 104 212 33 141 1.62e-21 96.7
Msa1172630 AT5G52260.1 46.154 104 53 2 101 202 14 116 1.78e-21 94.0
Msa1172630 AT2G02820.2 37.615 109 68 0 104 212 33 141 2.06e-21 96.7
Msa1172630 AT1G06180.1 43.269 104 56 2 101 202 14 116 2.10e-21 93.2
Msa1172630 AT5G55020.1 41.667 108 62 1 98 204 25 132 2.11e-21 97.1
Msa1172630 AT1G79180.2 37.143 140 54 2 101 206 16 155 2.72e-21 94.7
Msa1172630 AT5G07700.1 46.078 102 54 1 101 201 14 115 2.97e-21 94.7
Msa1172630 AT5G07700.2 46.078 102 54 1 101 201 14 115 2.97e-21 94.7
Msa1172630 AT2G02820.3 37.615 109 68 0 104 212 33 141 3.12e-21 94.4
Msa1172630 AT3G02940.2 43.137 102 57 1 101 201 14 115 5.03e-21 93.6
Msa1172630 AT3G02940.1 41.228 114 61 2 94 201 2 115 6.43e-21 93.2
Msa1172630 AT3G02940.3 41.228 114 61 2 94 201 2 115 6.43e-21 93.2
Msa1172630 AT5G35550.1 30.476 210 125 8 101 292 16 222 9.79e-21 91.7
Msa1172630 AT5G16770.4 40.952 105 61 1 101 204 14 118 9.98e-21 92.8
Msa1172630 AT5G16770.3 40.952 105 61 1 101 204 14 118 9.98e-21 92.8
Msa1172630 AT3G08500.1 42.308 104 59 1 101 203 32 135 1.02e-20 93.2
Msa1172630 AT3G13540.1 38.679 106 64 1 101 205 25 130 1.19e-20 91.3
Msa1172630 AT5G07690.1 44.554 101 55 1 101 200 14 114 1.22e-20 92.8
Msa1172630 AT5G15310.1 42.157 102 58 1 101 201 14 115 1.27e-20 92.4
Msa1172630 AT5G16770.1 40.952 105 61 1 101 204 14 118 1.29e-20 92.8
Msa1172630 AT5G16770.2 40.952 105 61 1 101 204 14 118 1.29e-20 92.8
Msa1172630 AT3G01140.2 42.157 102 58 1 101 201 14 115 1.30e-20 92.8
Msa1172630 AT1G74430.1 39.623 106 63 1 101 205 14 119 1.31e-20 91.7
Msa1172630 AT4G12350.1 42.453 106 58 2 98 201 11 115 1.39e-20 91.7
Msa1172630 AT1G14350.2 37.864 103 64 0 104 206 28 130 1.59e-20 93.6
Msa1172630 AT1G14350.1 37.864 103 64 0 104 206 28 130 1.59e-20 93.6
Msa1172630 AT5G15310.2 42.157 102 58 1 101 201 14 115 1.61e-20 92.0
Msa1172630 AT5G57620.1 41.905 105 59 2 99 201 12 116 1.61e-20 92.4
Msa1172630 AT5G65790.1 38.017 121 72 3 101 218 14 134 1.62e-20 93.2
Msa1172630 AT3G24310.1 39.130 115 67 2 101 213 20 133 1.71e-20 91.3
Msa1172630 AT1G66380.1 39.024 123 73 2 94 215 3 124 2.11e-20 87.4
Msa1172630 AT3G61250.1 44.231 104 55 2 101 202 14 116 2.12e-20 91.7
Msa1172630 AT3G60460.1 46.667 105 54 2 101 203 13 117 2.26e-20 91.3
Msa1172630 AT3G01140.1 42.157 102 58 1 101 201 57 158 2.44e-20 92.8
Msa1172630 AT5G62470.1 39.423 104 63 0 101 204 14 117 2.96e-20 92.0
Msa1172630 AT4G13480.1 42.857 105 57 2 101 203 8 111 3.17e-20 90.1
Msa1172630 AT5G15310.4 42.157 102 58 1 101 201 14 115 3.56e-20 89.7
Msa1172630 AT1G18710.1 40.196 102 60 1 101 201 14 115 3.81e-20 90.1
Msa1172630 AT2G16720.1 32.258 155 96 4 94 240 2 155 3.87e-20 90.1
Msa1172630 AT5G23000.1 43.269 104 55 2 101 201 14 116 4.30e-20 91.3
Msa1172630 AT4G34990.1 39.474 114 63 2 94 201 2 115 4.73e-20 90.1
Msa1172630 AT5G16600.1 42.453 106 58 2 101 204 14 118 6.09e-20 90.5
Msa1172630 AT5G14750.3 48.529 68 35 0 134 201 18 85 6.09e-20 87.0
Msa1172630 AT1G66230.1 42.991 107 58 2 100 204 13 118 6.29e-20 89.7
Msa1172630 AT3G49690.1 42.718 103 57 2 101 201 14 116 9.94e-20 89.7
Msa1172630 AT1G68320.1 40.566 106 60 2 101 204 21 125 1.02e-19 89.4
Msa1172630 AT1G25340.2 38.462 104 60 1 101 204 20 119 1.24e-19 89.0
Msa1172630 AT1G25340.1 39.623 106 61 2 101 204 20 124 1.28e-19 89.0
Msa1172630 AT3G27810.1 42.056 107 60 2 101 206 22 127 1.57e-19 87.4
Msa1172630 AT1G48000.1 44.211 95 52 1 101 194 34 128 2.36e-19 87.4
Msa1172630 AT1G25340.3 38.462 104 60 1 101 204 20 119 2.43e-19 88.6
Msa1172630 AT1G08810.1 37.795 127 78 1 101 226 14 140 2.59e-19 88.2
Msa1172630 AT4G22680.1 43.689 103 55 2 101 201 14 115 2.65e-19 87.8
Msa1172630 AT3G47600.1 37.615 109 67 1 101 208 14 122 3.37e-19 88.6
Msa1172630 AT1G66370.1 35.135 111 71 1 101 210 10 120 4.14e-19 86.7
Msa1172630 AT5G40350.1 40.594 101 59 1 101 200 19 119 5.61e-19 85.5
Msa1172630 AT3G53200.2 52.778 72 34 0 134 205 12 83 6.88e-19 85.1
Msa1172630 AT5G49330.1 40.196 102 60 1 101 201 14 115 8.86e-19 87.4
Msa1172630 AT5G62470.2 39.048 105 63 1 101 204 14 118 1.05e-18 87.4
Msa1172630 AT3G01530.1 40.741 108 61 2 101 206 27 133 1.68e-18 84.0
Msa1172630 AT2G47460.1 34.014 147 80 3 101 246 14 144 1.84e-18 87.0
Msa1172630 AT1G74650.1 40.777 103 60 1 101 202 14 116 2.69e-18 85.9
Msa1172630 AT4G37780.1 34.426 122 78 2 101 220 14 135 3.12e-18 85.5
Msa1172630 AT3G28910.1 40.196 102 60 1 101 201 14 115 4.63e-18 85.1
Msa1172630 AT3G12820.2 51.471 68 33 0 134 201 2 69 5.80e-18 82.0
Msa1172630 AT1G56650.1 38.017 121 74 1 94 213 3 123 6.50e-18 83.2
Msa1172630 AT5G26660.2 48.611 72 37 0 134 205 17 88 6.54e-18 84.7
Msa1172630 AT5G49620.1 37.121 132 75 3 75 204 7 132 1.96e-17 83.2
Msa1172630 AT5G59780.2 47.222 72 38 0 134 205 23 94 2.33e-17 80.9
Msa1172630 AT3G46130.3 47.222 72 38 0 134 205 13 84 3.11e-17 80.9
Msa1172630 AT3G18100.1 38.144 97 60 0 101 197 546 642 3.50e-17 84.7
Msa1172630 AT3G18100.1 32.632 95 62 2 101 194 495 588 5.78e-11 65.1
Msa1172630 AT3G46130.4 47.222 72 38 0 134 205 23 94 4.14e-17 80.9
Msa1172630 AT5G35550.2 45.238 84 45 1 134 217 53 135 4.37e-17 81.3
Msa1172630 AT1G66390.1 40.000 110 65 1 94 202 3 112 4.53e-17 80.9
Msa1172630 AT3G18100.3 38.144 97 60 0 101 197 498 594 4.56e-17 84.3
Msa1172630 AT3G18100.3 32.632 95 62 2 101 194 447 540 7.41e-11 64.7
Msa1172630 AT3G18100.4 38.144 97 60 0 101 197 385 481 4.83e-17 84.0
Msa1172630 AT3G18100.4 32.632 95 62 2 101 194 334 427 8.09e-11 64.7
Msa1172630 AT3G18100.2 38.144 97 60 0 101 197 333 429 6.06e-17 83.6
Msa1172630 AT3G06490.1 39.623 106 61 2 101 204 21 125 1.06e-16 81.3
Msa1172630 AT3G27810.2 47.945 73 37 1 134 206 7 78 1.14e-16 78.2
Msa1172630 AT2G36890.1 40.777 103 59 2 101 201 14 116 1.29e-16 80.5
Msa1172630 AT3G62610.1 37.864 103 63 1 101 202 14 116 1.54e-16 80.9
Msa1172630 AT2G36890.2 40.777 103 59 2 101 201 55 157 1.95e-16 80.5
Msa1172630 AT5G40350.2 46.269 67 36 0 134 200 8 74 3.49e-16 76.3
Msa1172630 AT5G62320.1 37.143 140 75 5 101 230 15 151 9.24e-16 77.0
Msa1172630 AT2G37630.1 32.117 137 87 3 101 233 4 138 2.62e-15 77.4
Msa1172630 AT1G66380.3 43.902 82 45 1 134 215 11 91 7.95e-15 70.9
Msa1172630 AT3G47600.2 41.333 75 44 0 134 208 42 116 9.90e-15 75.5
Msa1172630 AT5G49620.2 33.562 146 75 4 75 204 7 146 3.46e-14 73.6
Msa1172630 AT1G71030.2 42.424 66 38 0 137 202 5 70 9.25e-14 69.7
Msa1172630 AT1G71030.1 42.424 66 38 0 137 202 19 84 1.07e-13 70.1
Msa1172630 AT1G22640.3 35.514 107 60 3 144 246 1 102 8.84e-13 67.4
Msa1172630 AT5G14750.4 42.105 57 33 0 145 201 2 58 3.19e-12 64.3
Msa1172630 AT5G14750.2 42.105 57 33 0 145 201 2 58 3.19e-12 64.3
Msa1172630 AT3G23250.2 42.623 61 35 0 144 204 1 61 6.22e-12 65.5

Find 114 sgRNAs with CRISPR-Local

Find 309 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAACTTGTTGCTCTTTA+TGG 0.054838 8_1:-2755974 Msa1172630:CDS
ATGCAAGCTCATAGAATTTA+TGG 0.132347 8_1:-2755725 Msa1172630:CDS
CTGACATAACTATTCTCATT+AGG 0.246214 8_1:+2756073 None:intergenic
CCTTTCTTTCTCACATCATA+TGG 0.272531 8_1:-2754301 Msa1172630:three_prime_UTR
GAAGGTAATGGTTCTGATTC+TGG 0.292582 8_1:-2756130 Msa1172630:CDS
TTTGGAAGGTTAATATAATA+AGG 0.302911 8_1:+2755482 None:intergenic
ACTCCAAGGAAGTCAATAAA+TGG 0.307105 8_1:+2754524 None:intergenic
ATATAACATTCCCTCATAAA+TGG 0.307740 8_1:+2756196 None:intergenic
GGTGTTGAGTGTGGCTTAAA+TGG 0.311550 8_1:-2755389 Msa1172630:CDS
CTCTTTATGGTCCTCAGAAC+TGG 0.318567 8_1:-2755961 Msa1172630:CDS
GCCTATCCCAGCTTCTCATT+TGG 0.328018 8_1:+2754813 None:intergenic
ACAGCATTATCTGTTCTTCC+AGG 0.328837 8_1:+2755671 None:intergenic
TTACAATGGAGAATATAATA+TGG 0.331123 8_1:+2755428 None:intergenic
GAATCACTGGCATGTTATAA+TGG 0.340701 8_1:-2755645 Msa1172630:CDS
TGACATAACTATTCTCATTA+GGG 0.347232 8_1:+2756074 None:intergenic
CCATTGAAGCTCCTCAATAT+AGG 0.361499 8_1:-2754441 Msa1172630:three_prime_UTR
ATTGGTCTTTACCATTTATG+AGG 0.365573 8_1:-2756207 Msa1172630:CDS
ATTCCATTTATTGACTTCCT+TGG 0.378387 8_1:-2754527 Msa1172630:CDS
AAGGAGATGAGAAGAGAGAT+AGG 0.383304 8_1:+2754320 None:intergenic
TCAAGATTGCTATATCTCTA+AGG 0.385665 8_1:-2756245 Msa1172630:CDS
GATTTGAAGGCAAGAGTTGT+AGG 0.394903 8_1:-2755820 Msa1172630:intron
AGGAGGGTACTACTACTAAT+TGG 0.402413 8_1:-2756225 Msa1172630:CDS
TATTAATCCTTGGATCCAAT+TGG 0.404638 8_1:+2755783 None:intergenic
AACTTTGTGCAAGAGGTCAT+TGG 0.408066 8_1:-2756021 Msa1172630:CDS
AGGGAAAAGCCTTGCAATCA+TGG 0.411007 8_1:+2755691 None:intergenic
TATATTCTCCATTGTAATGA+TGG 0.411403 8_1:-2755422 Msa1172630:CDS
ATCTTCTTCTTCAATGGGAA+TGG 0.414415 8_1:-2756323 None:intergenic
TATTATATTAACCTTCCAAA+TGG 0.415009 8_1:-2755479 Msa1172630:CDS
ATAGAATTTATGGTAACAAA+TGG 0.421274 8_1:-2755715 Msa1172630:CDS
CCTATATTGAGGAGCTTCAA+TGG 0.421931 8_1:+2754441 None:intergenic
TCCTTTCTGTTTACCTCGAA+TGG 0.424342 8_1:+2754395 None:intergenic
GCTAAGATGGTTCAACCAAT+TGG 0.427019 8_1:-2755798 Msa1172630:CDS
GTTGGTGTTGGTGTTGGTGT+TGG 0.428209 8_1:+2754767 None:intergenic
AAAGGATAGTTGCTCTACTT+TGG 0.430473 8_1:-2754378 Msa1172630:three_prime_UTR
CTTTCTTTCTCACATCATAT+GGG 0.430568 8_1:-2754300 Msa1172630:three_prime_UTR
TTATATTGAAAGAAACTTTG+AGG 0.433784 8_1:-2756179 Msa1172630:CDS
ACAACAACAGTACAGATATT+AGG 0.434655 8_1:-2754635 Msa1172630:CDS
TAATAAGGTGGTGGTGGTAC+TGG 0.437030 8_1:+2755497 None:intergenic
TTATAGCCAAGTGTTCCATT+TGG 0.440823 8_1:+2755464 None:intergenic
GAAAAGCTAGAAGGCAGATC+AGG 0.449953 8_1:-2755926 Msa1172630:intron
AAAGCTCTTCTATTAATCCT+TGG 0.450183 8_1:+2755773 None:intergenic
CATTGTAATGATGGTATTGA+TGG 0.452078 8_1:-2755413 Msa1172630:CDS
AGAATACAAGCTTTGTCTCT+AGG 0.453853 8_1:-2755547 Msa1172630:CDS
TCATATATTGTGGATATTCA+TGG 0.454646 8_1:+2754729 None:intergenic
ATTATAGCCAAATGAGAAGC+TGG 0.455356 8_1:-2754820 Msa1172630:CDS
AAGCAAGCACCTACTCCTAT+TGG 0.457882 8_1:-2755344 Msa1172630:CDS
CTTGGTGTTGGTGTTGGTGT+TGG 0.458890 8_1:+2754761 None:intergenic
TCAATCTGTTTACAGAAGAA+TGG 0.458989 8_1:-2755573 Msa1172630:CDS
GAATACAAGCTTTGTCTCTA+GGG 0.466216 8_1:-2755546 Msa1172630:CDS
GCAAGAGTTGTAGGCTAAGA+TGG 0.469016 8_1:-2755811 Msa1172630:CDS
AGTGGTAAAGAGGTAGATAC+TGG 0.470872 8_1:-2756052 Msa1172630:CDS
CTCATAGCTGAAAAGCTAGA+AGG 0.475761 8_1:-2755935 Msa1172630:CDS
TGTTGTTGCTGCTGCTGTGG+TGG 0.476546 8_1:+2754655 None:intergenic
TCTGATTCTGGTGATGGTGT+TGG 0.477466 8_1:-2756118 Msa1172630:CDS
CCATATGATGTGAGAAAGAA+AGG 0.479122 8_1:+2754301 None:intergenic
TAGTTATGTCAGTGGTAAAG+AGG 0.479949 8_1:-2756062 Msa1172630:CDS
AACCTTCCAAATGGAACACT+TGG 0.485686 8_1:-2755470 Msa1172630:CDS
TGTTGAGCAAACAAGCCAAT+AGG 0.487405 8_1:+2755329 None:intergenic
TTGAGCTTAGAATCTTCTGC+AGG 0.489768 8_1:+2755995 None:intergenic
TAGAATTTATGGTAACAAAT+GGG 0.516685 8_1:-2755714 Msa1172630:CDS
AGCCAAGTGTTCCATTTGGA+AGG 0.520674 8_1:+2755468 None:intergenic
ATAATGCTGTTAAGAATCAC+TGG 0.522535 8_1:-2755658 Msa1172630:CDS
TAACCACTTGGTGTTGGTGT+TGG 0.523247 8_1:+2754755 None:intergenic
ATTGATGGTGGTGTTGAGTG+TGG 0.524255 8_1:-2755398 Msa1172630:CDS
TGTTGTTGTTGCTGCTGCTG+TGG 0.525901 8_1:+2754652 None:intergenic
CAGCATTATCTGTTCTTCCA+GGG 0.526372 8_1:+2755672 None:intergenic
TTAATATAATAAGGTGGTGG+TGG 0.529285 8_1:+2755491 None:intergenic
ACCATTCGAGGTAAACAGAA+AGG 0.536133 8_1:-2754396 Msa1172630:three_prime_UTR
GGTTCAACCAATTGGATCCA+AGG 0.536491 8_1:-2755790 Msa1172630:CDS
TTTATTGACTTCCTTGGAGT+AGG 0.540554 8_1:-2754521 Msa1172630:CDS
CACTCTAAACTTTGTGCAAG+AGG 0.540656 8_1:-2756028 Msa1172630:CDS
TGATTATCATGTAAATCACT+TGG 0.543435 8_1:+2754791 None:intergenic
AACAGTGATGATGGTGGGGA+AGG 0.545028 8_1:-2756148 Msa1172630:CDS
TTGGTCTTTACCATTTATGA+GGG 0.550399 8_1:-2756206 Msa1172630:CDS
TGGAATTGCATCTGAAGGAG+GGG 0.551472 8_1:+2754544 None:intergenic
GATGATGGTGGGGAAGGTAA+TGG 0.554441 8_1:-2756142 Msa1172630:CDS
GAAAACAACAACAGTGATGA+TGG 0.563340 8_1:-2756157 Msa1172630:CDS
AATGGTTCTGATTCTGGTGA+TGG 0.564679 8_1:-2756124 Msa1172630:CDS
TATAGTCACAGCCACAGGAA+TGG 0.565292 8_1:-2755522 Msa1172630:CDS
AACAATCAAGTGCTTACAGA+AGG 0.566019 8_1:-2755607 Msa1172630:CDS
AGGGATATAGTCACAGCCAC+AGG 0.568908 8_1:-2755527 Msa1172630:CDS
ACAACAACAGTGATGATGGT+GGG 0.571679 8_1:-2756153 Msa1172630:CDS
ACAAATGGGCCATGATTGCA+AGG 0.575363 8_1:-2755700 Msa1172630:CDS
GGAATTGCATCTGAAGGAGG+GGG 0.576661 8_1:+2754545 None:intergenic
ATGGAATTGCATCTGAAGGA+GGG 0.577415 8_1:+2754543 None:intergenic
GTTGGACCACACCTATATTG+AGG 0.578310 8_1:+2754430 None:intergenic
ATAAATGGAATTGCATCTGA+AGG 0.579622 8_1:+2754539 None:intergenic
GCTATGAGGTTCCAGTTCTG+AGG 0.581001 8_1:+2755950 None:intergenic
TGGTAGTAACCACTTGGTGT+TGG 0.581787 8_1:+2754749 None:intergenic
TGCATTGGCATCATATATTG+TGG 0.585044 8_1:+2754719 None:intergenic
AGATTGCTATATCTCTAAGG+AGG 0.589574 8_1:-2756242 Msa1172630:CDS
GGAAGGTTAATATAATAAGG+TGG 0.591119 8_1:+2755485 None:intergenic
CAACAACAGTGATGATGGTG+GGG 0.593787 8_1:-2756152 Msa1172630:CDS
GCCAAATGAGAAGCTGGGAT+AGG 0.603807 8_1:-2754814 Msa1172630:CDS
CATCAATACCATCATTACAA+TGG 0.604903 8_1:+2755414 None:intergenic
ATACCAGAAAAGAAATCAAG+TGG 0.605787 8_1:+2755302 None:intergenic
TTATAGCCAAATGAGAAGCT+GGG 0.610885 8_1:-2754819 Msa1172630:CDS
ATCATGTAGCTCCTACTCCA+AGG 0.613783 8_1:+2754510 None:intergenic
TGGTACTGGTTCCATTCCTG+TGG 0.614514 8_1:+2755511 None:intergenic
GCAAACAAGCCAATAGGAGT+AGG 0.624596 8_1:+2755335 None:intergenic
TGGAACACTTGGCTATAACA+TGG 0.626300 8_1:-2755459 Msa1172630:CDS
AATCAAGTGCTTACAGAAGG+AGG 0.630536 8_1:-2755604 Msa1172630:CDS
AGGTTAATATAATAAGGTGG+TGG 0.631664 8_1:+2755488 None:intergenic
TATTCATGGTAGTAACCACT+TGG 0.633915 8_1:+2754743 None:intergenic
AATGAGAATAGTTATGTCAG+TGG 0.634765 8_1:-2756070 Msa1172630:CDS
AATGGAATTGCATCTGAAGG+AGG 0.642777 8_1:+2754542 None:intergenic
ACACCAACACCAACACCAAG+TGG 0.652789 8_1:-2754758 Msa1172630:CDS
TGAAGTTTCACTATCATCAG+TGG 0.653083 8_1:-2754609 Msa1172630:CDS
GATTGCTATATCTCTAAGGA+GGG 0.657489 8_1:-2756241 Msa1172630:CDS
TGTAATGATGGTATTGATGG+TGG 0.660668 8_1:-2755410 Msa1172630:CDS
GGGAATGGTCTATGCAAACA+TGG 0.665000 8_1:-2756308 Msa1172630:CDS
AACAACAACAGTGATGATGG+TGG 0.670826 8_1:-2756154 Msa1172630:CDS
GAAGCTCCTCAATATAGGTG+TGG 0.675323 8_1:-2754436 Msa1172630:three_prime_UTR
CAAGTGCTTACAGAAGGAGG+AGG 0.676260 8_1:-2755601 Msa1172630:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTAACTTTTTTTTTTTTTT+TGG - chr8_1:2754758-2754777 Msa1172630:CDS 10.0%
!!! AATCATTTTTTATTGTTATA+TGG - chr8_1:2755498-2755517 Msa1172630:CDS 10.0%
!! AATTAGATATTAATAAACTT+TGG + chr8_1:2755544-2755563 None:intergenic 10.0%
!!! CTTAACTTTTTTTTTTTTTT+TGG - chr8_1:2754758-2754777 Msa1172630:CDS 10.0%
!!! AATCATTTTTTATTGTTATA+TGG - chr8_1:2755498-2755517 Msa1172630:CDS 10.0%
!! AATTAGATATTAATAAACTT+TGG + chr8_1:2755544-2755563 None:intergenic 10.0%
!!! TTTTTTTTTTTTGGATTTGA+AGG - chr8_1:2754767-2754786 Msa1172630:CDS 15.0%
!!! ATATTAATGTTTTCTTGAAA+TGG - chr8_1:2755726-2755745 Msa1172630:CDS 15.0%
!!! TTTTTTTTTTTTGGATTTGA+AGG - chr8_1:2754767-2754786 Msa1172630:CDS 15.0%
!!! ATATTAATGTTTTCTTGAAA+TGG - chr8_1:2755726-2755745 Msa1172630:CDS 15.0%
!! TTATATTGAAAGAAACTTTG+AGG - chr8_1:2754421-2754440 Msa1172630:three_prime_UTR 20.0%
!! ATAGAATTTATGGTAACAAA+TGG - chr8_1:2754885-2754904 Msa1172630:intron 20.0%
!! TAGAATTTATGGTAACAAAT+GGG - chr8_1:2754886-2754905 Msa1172630:intron 20.0%
!! TTTGGAAGGTTAATATAATA+AGG + chr8_1:2755121-2755140 None:intergenic 20.0%
!! TATTATATTAACCTTCCAAA+TGG - chr8_1:2755121-2755140 Msa1172630:intron 20.0%
!! TTACAATGGAGAATATAATA+TGG + chr8_1:2755175-2755194 None:intergenic 20.0%
!!! ATTTTCCTTTCATAGATTAT+TGG + chr8_1:2755387-2755406 None:intergenic 20.0%
!! GATTAATTAAAAATCCTCAT+GGG + chr8_1:2755482-2755501 None:intergenic 20.0%
!! TGATTAATTAAAAATCCTCA+TGG + chr8_1:2755483-2755502 None:intergenic 20.0%
!!! CATTTTTTATTGTTATATGG+TGG - chr8_1:2755501-2755520 Msa1172630:CDS 20.0%
!!! CTAATTTTCATCTATCATTT+TGG - chr8_1:2755558-2755577 Msa1172630:CDS 20.0%
!! TTATATTGAAAGAAACTTTG+AGG - chr8_1:2754421-2754440 Msa1172630:three_prime_UTR 20.0%
!! ATAGAATTTATGGTAACAAA+TGG - chr8_1:2754885-2754904 Msa1172630:intron 20.0%
!! TAGAATTTATGGTAACAAAT+GGG - chr8_1:2754886-2754905 Msa1172630:intron 20.0%
!! TTTGGAAGGTTAATATAATA+AGG + chr8_1:2755121-2755140 None:intergenic 20.0%
!! TATTATATTAACCTTCCAAA+TGG - chr8_1:2755121-2755140 Msa1172630:intron 20.0%
!! TTACAATGGAGAATATAATA+TGG + chr8_1:2755175-2755194 None:intergenic 20.0%
!!! ATTTTCCTTTCATAGATTAT+TGG + chr8_1:2755387-2755406 None:intergenic 20.0%
!! GATTAATTAAAAATCCTCAT+GGG + chr8_1:2755482-2755501 None:intergenic 20.0%
!! TGATTAATTAAAAATCCTCA+TGG + chr8_1:2755483-2755502 None:intergenic 20.0%
!!! CATTTTTTATTGTTATATGG+TGG - chr8_1:2755501-2755520 Msa1172630:CDS 20.0%
!!! CTAATTTTCATCTATCATTT+TGG - chr8_1:2755558-2755577 Msa1172630:CDS 20.0%
! ATATAACATTCCCTCATAAA+TGG + chr8_1:2754407-2754426 None:intergenic 25.0%
! TGACATAACTATTCTCATTA+GGG + chr8_1:2754529-2754548 None:intergenic 25.0%
! TATATTCTCCATTGTAATGA+TGG - chr8_1:2755178-2755197 Msa1172630:intron 25.0%
! TTGAACCAATAATCTATGAA+AGG - chr8_1:2755379-2755398 Msa1172630:CDS 25.0%
!! ACCTTCATTTAGTTATCTTT+TGG - chr8_1:2755608-2755627 Msa1172630:CDS 25.0%
! ACCAAAAGATAACTAAATGA+AGG + chr8_1:2755612-2755631 None:intergenic 25.0%
! ATTTGTGCAGATTTAAGAAA+GGG + chr8_1:2755652-2755671 None:intergenic 25.0%
!! AATGTTTTCTTGAAATGGAT+TGG - chr8_1:2755731-2755750 Msa1172630:CDS 25.0%
!!! TTGAAATGGATTGGATTTTT+AGG - chr8_1:2755740-2755759 Msa1172630:CDS 25.0%
! TGATTATCATGTAAATCACT+TGG + chr8_1:2755812-2755831 None:intergenic 25.0%
! TCATATATTGTGGATATTCA+TGG + chr8_1:2755874-2755893 None:intergenic 25.0%
! ATATAACATTCCCTCATAAA+TGG + chr8_1:2754407-2754426 None:intergenic 25.0%
! TGACATAACTATTCTCATTA+GGG + chr8_1:2754529-2754548 None:intergenic 25.0%
! TATATTCTCCATTGTAATGA+TGG - chr8_1:2755178-2755197 Msa1172630:intron 25.0%
! TTGAACCAATAATCTATGAA+AGG - chr8_1:2755379-2755398 Msa1172630:CDS 25.0%
!! ACCTTCATTTAGTTATCTTT+TGG - chr8_1:2755608-2755627 Msa1172630:CDS 25.0%
! ACCAAAAGATAACTAAATGA+AGG + chr8_1:2755612-2755631 None:intergenic 25.0%
! ATTTGTGCAGATTTAAGAAA+GGG + chr8_1:2755652-2755671 None:intergenic 25.0%
!! AATGTTTTCTTGAAATGGAT+TGG - chr8_1:2755731-2755750 Msa1172630:CDS 25.0%
!!! TTGAAATGGATTGGATTTTT+AGG - chr8_1:2755740-2755759 Msa1172630:CDS 25.0%
! TGATTATCATGTAAATCACT+TGG + chr8_1:2755812-2755831 None:intergenic 25.0%
! TCATATATTGTGGATATTCA+TGG + chr8_1:2755874-2755893 None:intergenic 25.0%
TCAAGATTGCTATATCTCTA+AGG - chr8_1:2754355-2754374 Msa1172630:three_prime_UTR 30.0%
!! ATTGGTCTTTACCATTTATG+AGG - chr8_1:2754393-2754412 Msa1172630:three_prime_UTR 30.0%
! TTGGTCTTTACCATTTATGA+GGG - chr8_1:2754394-2754413 Msa1172630:three_prime_UTR 30.0%
CTGACATAACTATTCTCATT+AGG + chr8_1:2754530-2754549 None:intergenic 30.0%
AATGAGAATAGTTATGTCAG+TGG - chr8_1:2754530-2754549 Msa1172630:CDS 30.0%
!! AAAGAACTTGTTGCTCTTTA+TGG - chr8_1:2754626-2754645 Msa1172630:CDS 30.0%
!! TTTGTTGTGTCCTCTATTTT+TGG - chr8_1:2754715-2754734 Msa1172630:CDS 30.0%
!! TTGTTGTGTCCTCTATTTTT+GGG - chr8_1:2754716-2754735 Msa1172630:CDS 30.0%
TATTAATCCTTGGATCCAAT+TGG + chr8_1:2754820-2754839 None:intergenic 30.0%
AAAGCTCTTCTATTAATCCT+TGG + chr8_1:2754830-2754849 None:intergenic 30.0%
ATGCAAGCTCATAGAATTTA+TGG - chr8_1:2754875-2754894 Msa1172630:intron 30.0%
ATAATGCTGTTAAGAATCAC+TGG - chr8_1:2754942-2754961 Msa1172630:intron 30.0%
TCAATCTGTTTACAGAAGAA+TGG - chr8_1:2755027-2755046 Msa1172630:intron 30.0%
! TTAATATAATAAGGTGGTGG+TGG + chr8_1:2755112-2755131 None:intergenic 30.0%
AGGTTAATATAATAAGGTGG+TGG + chr8_1:2755115-2755134 None:intergenic 30.0%
GGAAGGTTAATATAATAAGG+TGG + chr8_1:2755118-2755137 None:intergenic 30.0%
CATCAATACCATCATTACAA+TGG + chr8_1:2755189-2755208 None:intergenic 30.0%
! CATTGTAATGATGGTATTGA+TGG - chr8_1:2755187-2755206 Msa1172630:intron 30.0%
ATACCAGAAAAGAAATCAAG+TGG + chr8_1:2755301-2755320 None:intergenic 30.0%
! TTTGCTATATGTGCATGTTT+AGG - chr8_1:2755330-2755349 Msa1172630:CDS 30.0%
! TATATGTGCATGTTTAGGTT+AGG - chr8_1:2755335-2755354 Msa1172630:CDS 30.0%
ATGATCTTGTTGAAACTCAA+GGG + chr8_1:2755412-2755431 None:intergenic 30.0%
GATTTGTGCAGATTTAAGAA+AGG + chr8_1:2755653-2755672 None:intergenic 30.0%
TTCTTAAATCTGCACAAATC+AGG - chr8_1:2755653-2755672 Msa1172630:CDS 30.0%
!!! AAATGGATTGGATTTTTAGG+AGG - chr8_1:2755743-2755762 Msa1172630:CDS 30.0%
!!! TTGTTGTTTTGTTGTTGCAT+TGG + chr8_1:2755899-2755918 None:intergenic 30.0%
ACAACAACAGTACAGATATT+AGG - chr8_1:2755965-2755984 Msa1172630:CDS 30.0%
ATAAATGGAATTGCATCTGA+AGG + chr8_1:2756064-2756083 None:intergenic 30.0%
!! ATTCCATTTATTGACTTCCT+TGG - chr8_1:2756073-2756092 Msa1172630:CDS 30.0%
GAGCTTCAATGGAAAAAAAA+GGG + chr8_1:2756151-2756170 None:intergenic 30.0%
!!! GAATGGTTTTTAGGTAATGT+TGG + chr8_1:2756191-2756210 None:intergenic 30.0%
CTTTCTTTCTCACATCATAT+GGG - chr8_1:2756300-2756319 Msa1172630:CDS 30.0%
TCAAGATTGCTATATCTCTA+AGG - chr8_1:2754355-2754374 Msa1172630:three_prime_UTR 30.0%
!! ATTGGTCTTTACCATTTATG+AGG - chr8_1:2754393-2754412 Msa1172630:three_prime_UTR 30.0%
! TTGGTCTTTACCATTTATGA+GGG - chr8_1:2754394-2754413 Msa1172630:three_prime_UTR 30.0%
CTGACATAACTATTCTCATT+AGG + chr8_1:2754530-2754549 None:intergenic 30.0%
AATGAGAATAGTTATGTCAG+TGG - chr8_1:2754530-2754549 Msa1172630:CDS 30.0%
!! AAAGAACTTGTTGCTCTTTA+TGG - chr8_1:2754626-2754645 Msa1172630:CDS 30.0%
!! TTTGTTGTGTCCTCTATTTT+TGG - chr8_1:2754715-2754734 Msa1172630:CDS 30.0%
!! TTGTTGTGTCCTCTATTTTT+GGG - chr8_1:2754716-2754735 Msa1172630:CDS 30.0%
TATTAATCCTTGGATCCAAT+TGG + chr8_1:2754820-2754839 None:intergenic 30.0%
AAAGCTCTTCTATTAATCCT+TGG + chr8_1:2754830-2754849 None:intergenic 30.0%
ATGCAAGCTCATAGAATTTA+TGG - chr8_1:2754875-2754894 Msa1172630:intron 30.0%
ATAATGCTGTTAAGAATCAC+TGG - chr8_1:2754942-2754961 Msa1172630:intron 30.0%
TCAATCTGTTTACAGAAGAA+TGG - chr8_1:2755027-2755046 Msa1172630:intron 30.0%
! TTAATATAATAAGGTGGTGG+TGG + chr8_1:2755112-2755131 None:intergenic 30.0%
AGGTTAATATAATAAGGTGG+TGG + chr8_1:2755115-2755134 None:intergenic 30.0%
GGAAGGTTAATATAATAAGG+TGG + chr8_1:2755118-2755137 None:intergenic 30.0%
CATCAATACCATCATTACAA+TGG + chr8_1:2755189-2755208 None:intergenic 30.0%
! CATTGTAATGATGGTATTGA+TGG - chr8_1:2755187-2755206 Msa1172630:intron 30.0%
ATACCAGAAAAGAAATCAAG+TGG + chr8_1:2755301-2755320 None:intergenic 30.0%
! TTTGCTATATGTGCATGTTT+AGG - chr8_1:2755330-2755349 Msa1172630:CDS 30.0%
! TATATGTGCATGTTTAGGTT+AGG - chr8_1:2755335-2755354 Msa1172630:CDS 30.0%
ATGATCTTGTTGAAACTCAA+GGG + chr8_1:2755412-2755431 None:intergenic 30.0%
GATTTGTGCAGATTTAAGAA+AGG + chr8_1:2755653-2755672 None:intergenic 30.0%
TTCTTAAATCTGCACAAATC+AGG - chr8_1:2755653-2755672 Msa1172630:CDS 30.0%
!!! AAATGGATTGGATTTTTAGG+AGG - chr8_1:2755743-2755762 Msa1172630:CDS 30.0%
!!! TTGTTGTTTTGTTGTTGCAT+TGG + chr8_1:2755899-2755918 None:intergenic 30.0%
ACAACAACAGTACAGATATT+AGG - chr8_1:2755965-2755984 Msa1172630:CDS 30.0%
ATAAATGGAATTGCATCTGA+AGG + chr8_1:2756064-2756083 None:intergenic 30.0%
!! ATTCCATTTATTGACTTCCT+TGG - chr8_1:2756073-2756092 Msa1172630:CDS 30.0%
GAGCTTCAATGGAAAAAAAA+GGG + chr8_1:2756151-2756170 None:intergenic 30.0%
!!! GAATGGTTTTTAGGTAATGT+TGG + chr8_1:2756191-2756210 None:intergenic 30.0%
CTTTCTTTCTCACATCATAT+GGG - chr8_1:2756300-2756319 Msa1172630:CDS 30.0%
! AGATTGCTATATCTCTAAGG+AGG - chr8_1:2754358-2754377 Msa1172630:three_prime_UTR 35.0%
! GATTGCTATATCTCTAAGGA+GGG - chr8_1:2754359-2754378 Msa1172630:three_prime_UTR 35.0%
GAAAACAACAACAGTGATGA+TGG - chr8_1:2754443-2754462 Msa1172630:three_prime_UTR 35.0%
TAGTTATGTCAGTGGTAAAG+AGG - chr8_1:2754538-2754557 Msa1172630:CDS 35.0%
ATAGAGGACACAACAAAAAG+AGG + chr8_1:2754712-2754731 None:intergenic 35.0%
AGAAAGTGACCCAAAAATAG+AGG + chr8_1:2754728-2754747 None:intergenic 35.0%
! AAGAGCTTTTAGTGATGAAG+AGG - chr8_1:2754841-2754860 Msa1172630:CDS 35.0%
GAATCACTGGCATGTTATAA+TGG - chr8_1:2754955-2754974 Msa1172630:intron 35.0%
AACAATCAAGTGCTTACAGA+AGG - chr8_1:2754993-2755012 Msa1172630:intron 35.0%
! AGAATACAAGCTTTGTCTCT+AGG - chr8_1:2755053-2755072 Msa1172630:intron 35.0%
! GAATACAAGCTTTGTCTCTA+GGG - chr8_1:2755054-2755073 Msa1172630:intron 35.0%
TTATAGCCAAGTGTTCCATT+TGG + chr8_1:2755139-2755158 None:intergenic 35.0%
!! TGTAATGATGGTATTGATGG+TGG - chr8_1:2755190-2755209 Msa1172630:intron 35.0%
! TCACCACTTGATTTCTTTTC+TGG - chr8_1:2755295-2755314 Msa1172630:intron 35.0%
CATGATCTTGTTGAAACTCA+AGG + chr8_1:2755413-2755432 None:intergenic 35.0%
ATTATAGCCAAATGAGAAGC+TGG - chr8_1:2755780-2755799 Msa1172630:CDS 35.0%
TTATAGCCAAATGAGAAGCT+GGG - chr8_1:2755781-2755800 Msa1172630:CDS 35.0%
TATTCATGGTAGTAACCACT+TGG + chr8_1:2755860-2755879 None:intergenic 35.0%
! TGCATTGGCATCATATATTG+TGG + chr8_1:2755884-2755903 None:intergenic 35.0%
TGAAGTTTCACTATCATCAG+TGG - chr8_1:2755991-2756010 Msa1172630:CDS 35.0%
ACTCCAAGGAAGTCAATAAA+TGG + chr8_1:2756079-2756098 None:intergenic 35.0%
!! TTTATTGACTTCCTTGGAGT+AGG - chr8_1:2756079-2756098 Msa1172630:CDS 35.0%
! TTGCATTGCAGCTTTTTGAT+TGG + chr8_1:2756128-2756147 None:intergenic 35.0%
GGAGCTTCAATGGAAAAAAA+AGG + chr8_1:2756152-2756171 None:intergenic 35.0%
CATTACCTAAAAACCATTCG+AGG - chr8_1:2756192-2756211 Msa1172630:CDS 35.0%
! GTTTACCTCGAATGGTTTTT+AGG + chr8_1:2756200-2756219 None:intergenic 35.0%
AAAGGATAGTTGCTCTACTT+TGG - chr8_1:2756222-2756241 Msa1172630:CDS 35.0%
CCATATGATGTGAGAAAGAA+AGG + chr8_1:2756302-2756321 None:intergenic 35.0%
CCTTTCTTTCTCACATCATA+TGG - chr8_1:2756299-2756318 Msa1172630:CDS 35.0%
! AGATTGCTATATCTCTAAGG+AGG - chr8_1:2754358-2754377 Msa1172630:three_prime_UTR 35.0%
! GATTGCTATATCTCTAAGGA+GGG - chr8_1:2754359-2754378 Msa1172630:three_prime_UTR 35.0%
GAAAACAACAACAGTGATGA+TGG - chr8_1:2754443-2754462 Msa1172630:three_prime_UTR 35.0%
TAGTTATGTCAGTGGTAAAG+AGG - chr8_1:2754538-2754557 Msa1172630:CDS 35.0%
ATAGAGGACACAACAAAAAG+AGG + chr8_1:2754712-2754731 None:intergenic 35.0%
AGAAAGTGACCCAAAAATAG+AGG + chr8_1:2754728-2754747 None:intergenic 35.0%
! AAGAGCTTTTAGTGATGAAG+AGG - chr8_1:2754841-2754860 Msa1172630:CDS 35.0%
GAATCACTGGCATGTTATAA+TGG - chr8_1:2754955-2754974 Msa1172630:intron 35.0%
AACAATCAAGTGCTTACAGA+AGG - chr8_1:2754993-2755012 Msa1172630:intron 35.0%
! AGAATACAAGCTTTGTCTCT+AGG - chr8_1:2755053-2755072 Msa1172630:intron 35.0%
! GAATACAAGCTTTGTCTCTA+GGG - chr8_1:2755054-2755073 Msa1172630:intron 35.0%
TTATAGCCAAGTGTTCCATT+TGG + chr8_1:2755139-2755158 None:intergenic 35.0%
!! TGTAATGATGGTATTGATGG+TGG - chr8_1:2755190-2755209 Msa1172630:intron 35.0%
! TCACCACTTGATTTCTTTTC+TGG - chr8_1:2755295-2755314 Msa1172630:intron 35.0%
CATGATCTTGTTGAAACTCA+AGG + chr8_1:2755413-2755432 None:intergenic 35.0%
ATTATAGCCAAATGAGAAGC+TGG - chr8_1:2755780-2755799 Msa1172630:CDS 35.0%
TTATAGCCAAATGAGAAGCT+GGG - chr8_1:2755781-2755800 Msa1172630:CDS 35.0%
TATTCATGGTAGTAACCACT+TGG + chr8_1:2755860-2755879 None:intergenic 35.0%
! TGCATTGGCATCATATATTG+TGG + chr8_1:2755884-2755903 None:intergenic 35.0%
TGAAGTTTCACTATCATCAG+TGG - chr8_1:2755991-2756010 Msa1172630:CDS 35.0%
ACTCCAAGGAAGTCAATAAA+TGG + chr8_1:2756079-2756098 None:intergenic 35.0%
!! TTTATTGACTTCCTTGGAGT+AGG - chr8_1:2756079-2756098 Msa1172630:CDS 35.0%
! TTGCATTGCAGCTTTTTGAT+TGG + chr8_1:2756128-2756147 None:intergenic 35.0%
GGAGCTTCAATGGAAAAAAA+AGG + chr8_1:2756152-2756171 None:intergenic 35.0%
CATTACCTAAAAACCATTCG+AGG - chr8_1:2756192-2756211 Msa1172630:CDS 35.0%
! GTTTACCTCGAATGGTTTTT+AGG + chr8_1:2756200-2756219 None:intergenic 35.0%
AAAGGATAGTTGCTCTACTT+TGG - chr8_1:2756222-2756241 Msa1172630:CDS 35.0%
CCATATGATGTGAGAAAGAA+AGG + chr8_1:2756302-2756321 None:intergenic 35.0%
CCTTTCTTTCTCACATCATA+TGG - chr8_1:2756299-2756318 Msa1172630:CDS 35.0%
!! AGGAGGGTACTACTACTAAT+TGG - chr8_1:2754375-2754394 Msa1172630:three_prime_UTR 40.0%
!! AACAACAACAGTGATGATGG+TGG - chr8_1:2754446-2754465 Msa1172630:three_prime_UTR 40.0%
!! ACAACAACAGTGATGATGGT+GGG - chr8_1:2754447-2754466 Msa1172630:three_prime_UTR 40.0%
!! GAAGGTAATGGTTCTGATTC+TGG - chr8_1:2754470-2754489 Msa1172630:three_prime_UTR 40.0%
!! AATGGTTCTGATTCTGGTGA+TGG - chr8_1:2754476-2754495 Msa1172630:three_prime_UTR 40.0%
AGTGGTAAAGAGGTAGATAC+TGG - chr8_1:2754548-2754567 Msa1172630:CDS 40.0%
CACTCTAAACTTTGTGCAAG+AGG - chr8_1:2754572-2754591 Msa1172630:CDS 40.0%
AACTTTGTGCAAGAGGTCAT+TGG - chr8_1:2754579-2754598 Msa1172630:CDS 40.0%
TTGAGCTTAGAATCTTCTGC+AGG + chr8_1:2754608-2754627 None:intergenic 40.0%
!!! CTTCTAGCTTTTCAGCTATG+AGG + chr8_1:2754667-2754686 None:intergenic 40.0%
CTCATAGCTGAAAAGCTAGA+AGG - chr8_1:2754665-2754684 Msa1172630:CDS 40.0%
GATTTGAAGGCAAGAGTTGT+AGG - chr8_1:2754780-2754799 Msa1172630:CDS 40.0%
GCTAAGATGGTTCAACCAAT+TGG - chr8_1:2754802-2754821 Msa1172630:CDS 40.0%
CAGCATTATCTGTTCTTCCA+GGG + chr8_1:2754931-2754950 None:intergenic 40.0%
ACAGCATTATCTGTTCTTCC+AGG + chr8_1:2754932-2754951 None:intergenic 40.0%
AATCAAGTGCTTACAGAAGG+AGG - chr8_1:2754996-2755015 Msa1172630:intron 40.0%
AACCTTCCAAATGGAACACT+TGG - chr8_1:2755130-2755149 Msa1172630:intron 40.0%
TGGAACACTTGGCTATAACA+TGG - chr8_1:2755141-2755160 Msa1172630:intron 40.0%
TGTTGAGCAAACAAGCCAAT+AGG + chr8_1:2755274-2755293 None:intergenic 40.0%
ATCCTCATGGGAATGAATGT+AGG + chr8_1:2755470-2755489 None:intergenic 40.0%
ATGGAATTGCATCTGAAGGA+GGG + chr8_1:2756060-2756079 None:intergenic 40.0%
AATGGAATTGCATCTGAAGG+AGG + chr8_1:2756061-2756080 None:intergenic 40.0%
CCTATATTGAGGAGCTTCAA+TGG + chr8_1:2756162-2756181 None:intergenic 40.0%
CCATTGAAGCTCCTCAATAT+AGG - chr8_1:2756159-2756178 Msa1172630:CDS 40.0%
ACCATTCGAGGTAAACAGAA+AGG - chr8_1:2756204-2756223 Msa1172630:CDS 40.0%
TCCTTTCTGTTTACCTCGAA+TGG + chr8_1:2756208-2756227 None:intergenic 40.0%
AAGGAGATGAGAAGAGAGAT+AGG + chr8_1:2756283-2756302 None:intergenic 40.0%
!! AGGAGGGTACTACTACTAAT+TGG - chr8_1:2754375-2754394 Msa1172630:three_prime_UTR 40.0%
!! AACAACAACAGTGATGATGG+TGG - chr8_1:2754446-2754465 Msa1172630:three_prime_UTR 40.0%
!! ACAACAACAGTGATGATGGT+GGG - chr8_1:2754447-2754466 Msa1172630:three_prime_UTR 40.0%
!! GAAGGTAATGGTTCTGATTC+TGG - chr8_1:2754470-2754489 Msa1172630:three_prime_UTR 40.0%
!! AATGGTTCTGATTCTGGTGA+TGG - chr8_1:2754476-2754495 Msa1172630:three_prime_UTR 40.0%
AGTGGTAAAGAGGTAGATAC+TGG - chr8_1:2754548-2754567 Msa1172630:CDS 40.0%
CACTCTAAACTTTGTGCAAG+AGG - chr8_1:2754572-2754591 Msa1172630:CDS 40.0%
AACTTTGTGCAAGAGGTCAT+TGG - chr8_1:2754579-2754598 Msa1172630:CDS 40.0%
TTGAGCTTAGAATCTTCTGC+AGG + chr8_1:2754608-2754627 None:intergenic 40.0%
!!! CTTCTAGCTTTTCAGCTATG+AGG + chr8_1:2754667-2754686 None:intergenic 40.0%
CTCATAGCTGAAAAGCTAGA+AGG - chr8_1:2754665-2754684 Msa1172630:CDS 40.0%
GATTTGAAGGCAAGAGTTGT+AGG - chr8_1:2754780-2754799 Msa1172630:CDS 40.0%
GCTAAGATGGTTCAACCAAT+TGG - chr8_1:2754802-2754821 Msa1172630:CDS 40.0%
CAGCATTATCTGTTCTTCCA+GGG + chr8_1:2754931-2754950 None:intergenic 40.0%
ACAGCATTATCTGTTCTTCC+AGG + chr8_1:2754932-2754951 None:intergenic 40.0%
AATCAAGTGCTTACAGAAGG+AGG - chr8_1:2754996-2755015 Msa1172630:intron 40.0%
AACCTTCCAAATGGAACACT+TGG - chr8_1:2755130-2755149 Msa1172630:intron 40.0%
TGGAACACTTGGCTATAACA+TGG - chr8_1:2755141-2755160 Msa1172630:intron 40.0%
TGTTGAGCAAACAAGCCAAT+AGG + chr8_1:2755274-2755293 None:intergenic 40.0%
ATCCTCATGGGAATGAATGT+AGG + chr8_1:2755470-2755489 None:intergenic 40.0%
ATGGAATTGCATCTGAAGGA+GGG + chr8_1:2756060-2756079 None:intergenic 40.0%
AATGGAATTGCATCTGAAGG+AGG + chr8_1:2756061-2756080 None:intergenic 40.0%
CCTATATTGAGGAGCTTCAA+TGG + chr8_1:2756162-2756181 None:intergenic 40.0%
CCATTGAAGCTCCTCAATAT+AGG - chr8_1:2756159-2756178 Msa1172630:CDS 40.0%
ACCATTCGAGGTAAACAGAA+AGG - chr8_1:2756204-2756223 Msa1172630:CDS 40.0%
TCCTTTCTGTTTACCTCGAA+TGG + chr8_1:2756208-2756227 None:intergenic 40.0%
AAGGAGATGAGAAGAGAGAT+AGG + chr8_1:2756283-2756302 None:intergenic 40.0%
GGGAATGGTCTATGCAAACA+TGG - chr8_1:2754292-2754311 Msa1172630:three_prime_UTR 45.0%
!! CAACAACAGTGATGATGGTG+GGG - chr8_1:2754448-2754467 Msa1172630:three_prime_UTR 45.0%
!! TCTGATTCTGGTGATGGTGT+TGG - chr8_1:2754482-2754501 Msa1172630:three_prime_UTR 45.0%
CTCTTTATGGTCCTCAGAAC+TGG - chr8_1:2754639-2754658 Msa1172630:CDS 45.0%
GAAAAGCTAGAAGGCAGATC+AGG - chr8_1:2754674-2754693 Msa1172630:CDS 45.0%
GCAAGAGTTGTAGGCTAAGA+TGG - chr8_1:2754789-2754808 Msa1172630:CDS 45.0%
GGTTCAACCAATTGGATCCA+AGG - chr8_1:2754810-2754829 Msa1172630:CDS 45.0%
ACAAATGGGCCATGATTGCA+AGG - chr8_1:2754900-2754919 Msa1172630:intron 45.0%
AGGGAAAAGCCTTGCAATCA+TGG + chr8_1:2754912-2754931 None:intergenic 45.0%
! ATGATTGCAAGGCTTTTCCC+TGG - chr8_1:2754911-2754930 Msa1172630:intron 45.0%
TATAGTCACAGCCACAGGAA+TGG - chr8_1:2755078-2755097 Msa1172630:intron 45.0%
!! TAATAAGGTGGTGGTGGTAC+TGG + chr8_1:2755106-2755125 None:intergenic 45.0%
AGCCAAGTGTTCCATTTGGA+AGG + chr8_1:2755135-2755154 None:intergenic 45.0%
!! ATTGATGGTGGTGTTGAGTG+TGG - chr8_1:2755202-2755221 Msa1172630:intron 45.0%
! GGTGTTGAGTGTGGCTTAAA+TGG - chr8_1:2755211-2755230 Msa1172630:intron 45.0%
AAGCAAGCACCTACTCCTAT+TGG - chr8_1:2755256-2755275 Msa1172630:intron 45.0%
GCAAACAAGCCAATAGGAGT+AGG + chr8_1:2755268-2755287 None:intergenic 45.0%
CATGGGAATGAATGTAGGCA+TGG + chr8_1:2755465-2755484 None:intergenic 45.0%
TGCCTACATTCATTCCCATG+AGG - chr8_1:2755465-2755484 Msa1172630:CDS 45.0%
!! TAACCACTTGGTGTTGGTGT+TGG + chr8_1:2755848-2755867 None:intergenic 45.0%
!! TGGTAGTAACCACTTGGTGT+TGG + chr8_1:2755854-2755873 None:intergenic 45.0%
TGGAATTGCATCTGAAGGAG+GGG + chr8_1:2756059-2756078 None:intergenic 45.0%
ATCATGTAGCTCCTACTCCA+AGG + chr8_1:2756093-2756112 None:intergenic 45.0%
GAAGCTCCTCAATATAGGTG+TGG - chr8_1:2756164-2756183 Msa1172630:CDS 45.0%
GTTGGACCACACCTATATTG+AGG + chr8_1:2756173-2756192 None:intergenic 45.0%
GTTTGCATAGACCATTCCCA+TGG + chr8_1:2754291-2754310 None:intergenic 45.0%
GGGAATGGTCTATGCAAACA+TGG - chr8_1:2754292-2754311 Msa1172630:three_prime_UTR 45.0%
!! CAACAACAGTGATGATGGTG+GGG - chr8_1:2754448-2754467 Msa1172630:three_prime_UTR 45.0%
!! TCTGATTCTGGTGATGGTGT+TGG - chr8_1:2754482-2754501 Msa1172630:three_prime_UTR 45.0%
CTCTTTATGGTCCTCAGAAC+TGG - chr8_1:2754639-2754658 Msa1172630:CDS 45.0%
GAAAAGCTAGAAGGCAGATC+AGG - chr8_1:2754674-2754693 Msa1172630:CDS 45.0%
GCAAGAGTTGTAGGCTAAGA+TGG - chr8_1:2754789-2754808 Msa1172630:CDS 45.0%
GGTTCAACCAATTGGATCCA+AGG - chr8_1:2754810-2754829 Msa1172630:CDS 45.0%
ACAAATGGGCCATGATTGCA+AGG - chr8_1:2754900-2754919 Msa1172630:intron 45.0%
AGGGAAAAGCCTTGCAATCA+TGG + chr8_1:2754912-2754931 None:intergenic 45.0%
! ATGATTGCAAGGCTTTTCCC+TGG - chr8_1:2754911-2754930 Msa1172630:intron 45.0%
TATAGTCACAGCCACAGGAA+TGG - chr8_1:2755078-2755097 Msa1172630:intron 45.0%
!! TAATAAGGTGGTGGTGGTAC+TGG + chr8_1:2755106-2755125 None:intergenic 45.0%
AGCCAAGTGTTCCATTTGGA+AGG + chr8_1:2755135-2755154 None:intergenic 45.0%
!! ATTGATGGTGGTGTTGAGTG+TGG - chr8_1:2755202-2755221 Msa1172630:intron 45.0%
! GGTGTTGAGTGTGGCTTAAA+TGG - chr8_1:2755211-2755230 Msa1172630:intron 45.0%
AAGCAAGCACCTACTCCTAT+TGG - chr8_1:2755256-2755275 Msa1172630:intron 45.0%
GCAAACAAGCCAATAGGAGT+AGG + chr8_1:2755268-2755287 None:intergenic 45.0%
CATGGGAATGAATGTAGGCA+TGG + chr8_1:2755465-2755484 None:intergenic 45.0%
TGCCTACATTCATTCCCATG+AGG - chr8_1:2755465-2755484 Msa1172630:CDS 45.0%
!! TAACCACTTGGTGTTGGTGT+TGG + chr8_1:2755848-2755867 None:intergenic 45.0%
!! TGGTAGTAACCACTTGGTGT+TGG + chr8_1:2755854-2755873 None:intergenic 45.0%
TGGAATTGCATCTGAAGGAG+GGG + chr8_1:2756059-2756078 None:intergenic 45.0%
ATCATGTAGCTCCTACTCCA+AGG + chr8_1:2756093-2756112 None:intergenic 45.0%
GAAGCTCCTCAATATAGGTG+TGG - chr8_1:2756164-2756183 Msa1172630:CDS 45.0%
GTTGGACCACACCTATATTG+AGG + chr8_1:2756173-2756192 None:intergenic 45.0%
!! AACAGTGATGATGGTGGGGA+AGG - chr8_1:2754452-2754471 Msa1172630:three_prime_UTR 50.0%
!! GATGATGGTGGGGAAGGTAA+TGG - chr8_1:2754458-2754477 Msa1172630:three_prime_UTR 50.0%
GCTATGAGGTTCCAGTTCTG+AGG + chr8_1:2754653-2754672 None:intergenic 50.0%
CAAGTGCTTACAGAAGGAGG+AGG - chr8_1:2754999-2755018 Msa1172630:intron 50.0%
AGGGATATAGTCACAGCCAC+AGG - chr8_1:2755073-2755092 Msa1172630:intron 50.0%
!! TGGTACTGGTTCCATTCCTG+TGG + chr8_1:2755092-2755111 None:intergenic 50.0%
GCCAAATGAGAAGCTGGGAT+AGG - chr8_1:2755786-2755805 Msa1172630:CDS 50.0%
GCCTATCCCAGCTTCTCATT+TGG + chr8_1:2755790-2755809 None:intergenic 50.0%
!! GTTGGTGTTGGTGTTGGTGT+TGG + chr8_1:2755836-2755855 None:intergenic 50.0%
!! CTTGGTGTTGGTGTTGGTGT+TGG + chr8_1:2755842-2755861 None:intergenic 50.0%
ACACCAACACCAACACCAAG+TGG - chr8_1:2755842-2755861 Msa1172630:intron 50.0%
! TGTTGTTGTTGCTGCTGCTG+TGG + chr8_1:2755951-2755970 None:intergenic 50.0%
GGAATTGCATCTGAAGGAGG+GGG + chr8_1:2756058-2756077 None:intergenic 50.0%
!! AACAGTGATGATGGTGGGGA+AGG - chr8_1:2754452-2754471 Msa1172630:three_prime_UTR 50.0%
!! GATGATGGTGGGGAAGGTAA+TGG - chr8_1:2754458-2754477 Msa1172630:three_prime_UTR 50.0%
GCTATGAGGTTCCAGTTCTG+AGG + chr8_1:2754653-2754672 None:intergenic 50.0%
CAAGTGCTTACAGAAGGAGG+AGG - chr8_1:2754999-2755018 Msa1172630:intron 50.0%
AGGGATATAGTCACAGCCAC+AGG - chr8_1:2755073-2755092 Msa1172630:intron 50.0%
!! TGGTACTGGTTCCATTCCTG+TGG + chr8_1:2755092-2755111 None:intergenic 50.0%
GCCAAATGAGAAGCTGGGAT+AGG - chr8_1:2755786-2755805 Msa1172630:CDS 50.0%
GCCTATCCCAGCTTCTCATT+TGG + chr8_1:2755790-2755809 None:intergenic 50.0%
!! GTTGGTGTTGGTGTTGGTGT+TGG + chr8_1:2755836-2755855 None:intergenic 50.0%
!! CTTGGTGTTGGTGTTGGTGT+TGG + chr8_1:2755842-2755861 None:intergenic 50.0%
ACACCAACACCAACACCAAG+TGG - chr8_1:2755842-2755861 Msa1172630:intron 50.0%
! TGTTGTTGTTGCTGCTGCTG+TGG + chr8_1:2755951-2755970 None:intergenic 50.0%
GGAATTGCATCTGAAGGAGG+GGG + chr8_1:2756058-2756077 None:intergenic 50.0%
TGTTGTTGCTGCTGCTGTGG+TGG + chr8_1:2755948-2755967 None:intergenic 55.0%
TGTTGTTGCTGCTGCTGTGG+TGG + chr8_1:2755948-2755967 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 2754290 2756332 2754290 ID=Msa1172630;Name=Msa1172630
chr8_1 mRNA 2754290 2756332 2754290 ID=Msa1172630-mRNA-1;Parent=Msa1172630;Name=Msa1172630-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|1|0.33|1|1|1|3|221|427
chr8_1 exon 2754290 2754860 2754290 ID=Msa1172630-mRNA-1:exon:1010;Parent=Msa1172630-mRNA-1
chr8_1 exon 2755306 2755833 2755306 ID=Msa1172630-mRNA-1:exon:1009;Parent=Msa1172630-mRNA-1
chr8_1 exon 2755927 2756332 2755927 ID=Msa1172630-mRNA-1:exon:1008;Parent=Msa1172630-mRNA-1
chr8_1 CDS 2755927 2756332 2755927 ID=Msa1172630-mRNA-1:cds;Parent=Msa1172630-mRNA-1
chr8_1 CDS 2755306 2755833 2755306 ID=Msa1172630-mRNA-1:cds;Parent=Msa1172630-mRNA-1
chr8_1 CDS 2754511 2754860 2754511 ID=Msa1172630-mRNA-1:cds;Parent=Msa1172630-mRNA-1
chr8_1 three_prime_UTR 2754290 2754510 2754290 ID=Msa1172630-mRNA-1:three_prime_utr;Parent=Msa1172630-mRNA-1
Gene Sequence

>Msa1172630

ATGGGAATGGTCTATGCAAACATGGAGTCTTTATCACTAAACTATGCTGCTTCTTCTTCTTCATCTCAAGATTGCTATATCTCTAAGGAGGGTACTACTACTAATTGGTCTTTACCATTTATGAGGGAATGTTATATTGAAAGAAACTTTGAGGAAAACAACAACAGTGATGATGGTGGGGAAGGTAATGGTTCTGATTCTGGTGATGGTGTTGGAGAAAACAGTGAAAAAATTAACCCTAATGAGAATAGTTATGTCAGTGGTAAAGAGGTAGATACTGGTCACTCTAAACTTTGTGCAAGAGGTCATTGGAGACCTGCAGAAGATTCTAAGCTCAAAGAACTTGTTGCTCTTTATGGTCCTCAGAACTGGAACCTCATAGCTGAAAAGCTAGAAGGCAGATCAGGCAAGAGTTGTAGGCTAAGATGGTTCAACCAATTGGATCCAAGGATTAATAGAAGAGCTTTTAGTGATGAAGAGGAAGAAAGATTAATGCAAGCTCATAGAATTTATGGTAACAAATGGGCCATGATTGCAAGGCTTTTCCCTGGAAGAACAGATAATGCTGTTAAGAATCACTGGCATGTTATAATGGCAAGAAAGTACAGAGAACAATCAAGTGCTTACAGAAGGAGGAGGCTGAATCAATCTGTTTACAGAAGAATGGAAGAGAATACAAGCTTTGTCTCTAGGGATATAGTCACAGCCACAGGAATGGAACCAGTACCACCACCACCTTATTATATTAACCTTCCAAATGGAACACTTGGCTATAACATGGCTAGTTTTCCATATTATATTCTCCATTGTAATGATGGTATTGATGGTGGTGTTGAGTGTGGCTTAAATGGTTCAACTGCAGTCTCAAGTGACAAGCAAGCACCTACTCCTATTGGCTTGTTTGCTCAACAGTCACCACTTGATTTCTTTTCTGGAGGTAGAAGAAATGAGTATTATAGCCAAATGAGAAGCTGGGATAGGCCAAGTGATTTACATGATAATCAACCAACACCAACACCAACACCAACACCAAGTGGTTACTACCATGAATATCCACAATATATGATGCCAATGCAACAACAAAACAACAATTTTTACAGTTTCTCATCAAATATTTCCACCACAGCAGCAGCAACAACAACAACAGTACAGATATTAGGCAGTGAAGTTTCACTATCATCAGTGGTAGCAGCAGAAAATCACAGAGATCAAGTTCTGATGAGTAATCCCCCTCCTTCAGATGCAATTCCATTTATTGACTTCCTTGGAGTAGGAGCTACATGA
Protein sequence

>Msa1172630

MGMVYANMESLSLNYAASSSSSQDCYISKEGTTTNWSLPFMRECYIERNFEENNNSDDGGEGNGSDSGDGVGENSEKINPNENSYVSGKEVDTGHSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFSDEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRRLNQSVYRRMEENTSFVSRDIVTATGMEPVPPPPYYINLPNGTLGYNMASFPYYILHCNDGIDGGVECGLNGSTAVSSDKQAPTPIGLFAQQSPLDFFSGGRRNEYYSQMRSWDRPSDLHDNQPTPTPTPTPSGYYHEYPQYMMPMQQQNNNFYSFSSNISTTAAATTTTVQILGSEVSLSSVVAAENHRDQVLMSNPPPSDAIPFIDFLGVGAT*