Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1178250 | XP_013444864.1 | 96.169 | 496 | 19 | 0 | 1 | 496 | 1 | 496 | 0.0 | 978 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1178250 | sp|B0X1Q4|RUMI_CULQU | 24.646 | 353 | 230 | 9 | 97 | 431 | 68 | 402 | 8.42e-25 | 109 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0744640 | Msa1178250 | 0.803099 | 4.098327e-49 | -8.615850e-47 |
| Msa0841730 | Msa1178250 | 0.803106 | 4.084117e-49 | -8.615850e-47 |
| Msa1178250 | Msa1237890 | 0.869263 | 3.530344e-66 | -8.615850e-47 |
| Msa1178250 | Msa1318550 | 0.839431 | 1.591124e-57 | -8.615850e-47 |
| Msa1178250 | Msa1319560 | 0.802159 | 6.404001e-49 | -8.615850e-47 |
| Msa0870510 | Msa1178250 | 0.813418 | 2.585077e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1178250 | MtrunA17_Chr8g0349241 | 96.169 | 496 | 19 | 0 | 1 | 496 | 1 | 496 | 0.0 | 978 |
| Msa1178250 | MtrunA17_Chr7g0247261 | 61.220 | 410 | 154 | 3 | 63 | 468 | 35 | 443 | 0.0 | 572 |
| Msa1178250 | MtrunA17_Chr7g0247251 | 63.969 | 383 | 136 | 1 | 88 | 468 | 14 | 396 | 0.0 | 557 |
| Msa1178250 | MtrunA17_Chr8g0349361 | 54.244 | 483 | 208 | 7 | 12 | 488 | 26 | 501 | 0.0 | 555 |
| Msa1178250 | MtrunA17_Chr8g0349371 | 57.639 | 432 | 178 | 5 | 60 | 488 | 55 | 484 | 0.0 | 531 |
| Msa1178250 | MtrunA17_Chr6g0471441 | 54.118 | 425 | 194 | 1 | 65 | 488 | 70 | 494 | 0.0 | 530 |
| Msa1178250 | MtrunA17_Chr5g0397701 | 56.265 | 423 | 166 | 6 | 70 | 488 | 84 | 491 | 5.58e-176 | 504 |
| Msa1178250 | MtrunA17_Chr3g0104841 | 40.741 | 459 | 250 | 9 | 20 | 464 | 13 | 463 | 3.84e-123 | 368 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1178250 | AT5G23850.1 | 55.319 | 423 | 184 | 2 | 65 | 482 | 99 | 521 | 0.0 | 540 |
| Msa1178250 | AT2G45830.4 | 49.896 | 483 | 221 | 5 | 18 | 488 | 34 | 507 | 0.0 | 527 |
| Msa1178250 | AT2G45830.1 | 49.896 | 483 | 221 | 5 | 18 | 488 | 34 | 507 | 0.0 | 527 |
| Msa1178250 | AT3G48980.1 | 51.487 | 437 | 202 | 4 | 62 | 488 | 88 | 524 | 5.89e-179 | 513 |
| Msa1178250 | AT3G48980.2 | 51.487 | 437 | 202 | 4 | 62 | 488 | 94 | 530 | 9.16e-179 | 513 |
| Msa1178250 | AT3G61270.1 | 49.064 | 481 | 236 | 4 | 11 | 488 | 10 | 484 | 1.54e-178 | 511 |
| Msa1178250 | AT2G45830.3 | 56.011 | 366 | 161 | 0 | 123 | 488 | 1 | 366 | 3.16e-167 | 477 |
| Msa1178250 | AT2G45830.6 | 56.011 | 366 | 161 | 0 | 123 | 488 | 1 | 366 | 3.16e-167 | 477 |
| Msa1178250 | AT2G45830.2 | 56.011 | 366 | 161 | 0 | 123 | 488 | 1 | 366 | 3.16e-167 | 477 |
| Msa1178250 | AT2G45830.5 | 56.011 | 366 | 161 | 0 | 123 | 488 | 1 | 366 | 3.16e-167 | 477 |
| Msa1178250 | AT3G61280.1 | 47.629 | 485 | 230 | 6 | 26 | 488 | 41 | 523 | 3.37e-167 | 483 |
| Msa1178250 | AT1G63420.1 | 50.000 | 456 | 211 | 6 | 49 | 488 | 113 | 567 | 4.61e-164 | 477 |
| Msa1178250 | AT2G45840.1 | 46.567 | 466 | 227 | 6 | 39 | 488 | 48 | 507 | 1.42e-161 | 468 |
| Msa1178250 | AT3G61290.1 | 50.353 | 425 | 202 | 4 | 69 | 488 | 17 | 437 | 2.08e-160 | 463 |
| Msa1178250 | AT3G61270.2 | 54.645 | 366 | 165 | 1 | 123 | 488 | 1 | 365 | 6.48e-157 | 451 |
| Msa1178250 | AT1G07220.1 | 41.837 | 490 | 259 | 11 | 18 | 494 | 25 | 501 | 1.46e-131 | 391 |
| Msa1178250 | AT1G63420.2 | 52.312 | 346 | 153 | 5 | 49 | 383 | 113 | 457 | 3.11e-125 | 374 |
| Msa1178250 | AT3G61280.2 | 45.092 | 326 | 155 | 6 | 26 | 329 | 41 | 364 | 3.36e-96 | 296 |
Find 87 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGATCCATTTGAAGTAATT+TGG | 0.125619 | 8_1:+10926731 | None:intergenic |
| ATAGAATACCTTACGCATTT+TGG | 0.198779 | 8_1:-10925814 | Msa1178250:CDS |
| TGAAGAGTTTGAGTTGTATA+AGG | 0.263143 | 8_1:+10924234 | None:intergenic |
| AAATTTCCAAGACACAAAAT+TGG | 0.265181 | 8_1:-10925580 | Msa1178250:CDS |
| CAAGGGATGTGTTCACAATA+TGG | 0.273614 | 8_1:-10926574 | Msa1178250:CDS |
| CAAGAAGATGAAGGAGAATA+AGG | 0.310458 | 8_1:+10930136 | None:intergenic |
| CCACTATAACTCTTTATTCA+TGG | 0.313202 | 8_1:+10924161 | None:intergenic |
| TGCTACCTTTGCAGCACTAT+TGG | 0.319041 | 8_1:-10925287 | Msa1178250:CDS |
| GATTAAGTTTGCTGTGGATT+GGG | 0.331917 | 8_1:-10925235 | Msa1178250:CDS |
| TTGATGAAAGCTTTGACTAT+TGG | 0.343613 | 8_1:+10930196 | None:intergenic |
| AAGGAACATGCCATACTTTC+AGG | 0.348711 | 8_1:+10924336 | None:intergenic |
| AATAGTAGTGCTTGTTACTT+TGG | 0.349075 | 8_1:+10926898 | None:intergenic |
| CCCATGGTTTAAGATCTTCA+TGG | 0.352277 | 8_1:+10926711 | None:intergenic |
| TGAGGTTTGTCCTGAAAGTA+TGG | 0.364946 | 8_1:-10924346 | Msa1178250:CDS |
| TGGAAAATCAATGTACCTAT+AGG | 0.373614 | 8_1:-10925560 | Msa1178250:intron |
| CATGTCCAAATTACTTCAAA+TGG | 0.391281 | 8_1:-10926736 | Msa1178250:CDS |
| CAAATTATCTATGATGTAGT+TGG | 0.392546 | 8_1:+10924461 | None:intergenic |
| CTGATTGGACCTTCTGGGGT+TGG | 0.400885 | 8_1:-10926376 | Msa1178250:intron |
| AGATTAAGTTTGCTGTGGAT+TGG | 0.407167 | 8_1:-10925236 | Msa1178250:CDS |
| AGCATTCCAATCATGTTCTT+CGG | 0.418553 | 8_1:+10925736 | None:intergenic |
| TTTCTAATGGGAGATACTGC+TGG | 0.418858 | 8_1:+10925782 | None:intergenic |
| TCATCAATTTCTACAAGAAA+AGG | 0.421386 | 8_1:-10924214 | Msa1178250:CDS |
| GTGATTCCTGTATTCTCCCA+TGG | 0.433081 | 8_1:+10926695 | None:intergenic |
| AAGGGATGTGTTCACAATAT+GGG | 0.434287 | 8_1:-10926573 | Msa1178250:CDS |
| CAAACCTCAACTGCTCCTTC+TGG | 0.450497 | 8_1:+10924360 | None:intergenic |
| GTTTCATTGTTGCAATTTAG+TGG | 0.450629 | 8_1:+10926827 | None:intergenic |
| AGATGGACAAGTTGAGTTTG+AGG | 0.459852 | 8_1:+10926805 | None:intergenic |
| ATGCATCCGAAGAACATGAT+TGG | 0.460625 | 8_1:-10925742 | Msa1178250:CDS |
| TACAGGAATCACAAGAGAAA+TGG | 0.461457 | 8_1:-10926684 | Msa1178250:CDS |
| CAACCCCAGAAGGTCCAATC+AGG | 0.463664 | 8_1:+10926377 | None:intergenic |
| AAGGAAACATTTCATGGTTG+AGG | 0.463785 | 8_1:-10924304 | Msa1178250:CDS |
| ACATTTCATGGTTGAGGGCA+TGG | 0.463967 | 8_1:-10924298 | Msa1178250:CDS |
| TTGCGTAATGTTGTTTCCCA+TGG | 0.478952 | 8_1:+10925872 | None:intergenic |
| TAAGCACTTTGATCATCCAT+TGG | 0.483250 | 8_1:-10930100 | Msa1178250:CDS |
| TTGTTTCCCATGGTCTTATG+TGG | 0.487471 | 8_1:+10925882 | None:intergenic |
| AGGAAACATTTCATGGTTGA+GGG | 0.488331 | 8_1:-10924303 | Msa1178250:CDS |
| CTTAAACCATGGGAGAATAC+AGG | 0.488658 | 8_1:-10926701 | Msa1178250:CDS |
| GTTTGAGTTGTATAAGGAGA+AGG | 0.488706 | 8_1:+10924240 | None:intergenic |
| TTTCATTGTTGCAATTTAGT+GGG | 0.508924 | 8_1:+10926828 | None:intergenic |
| AAGGCAACAAGAATGTCAAA+TGG | 0.510499 | 8_1:-10925841 | Msa1178250:CDS |
| CATTGAGATGAAATGTTGTT+GGG | 0.512315 | 8_1:+10926777 | None:intergenic |
| TCATTGAGATGAAATGTTGT+TGG | 0.516754 | 8_1:+10926776 | None:intergenic |
| GTAAAGAAATCATAGTACTT+AGG | 0.517978 | 8_1:+10925318 | None:intergenic |
| TGGTGCAAGGAAACATTTCA+TGG | 0.530997 | 8_1:-10924310 | Msa1178250:CDS |
| ATTAAGTTTGCTGTGGATTG+GGG | 0.532995 | 8_1:-10925234 | Msa1178250:CDS |
| TGAAACATTAGCTCCAGATC+AGG | 0.538487 | 8_1:+10926512 | None:intergenic |
| TTTCCTGATTGGACCTTCTG+GGG | 0.541065 | 8_1:-10926380 | Msa1178250:CDS |
| AATGTTGTTGGGTAGGAAGA+TGG | 0.541971 | 8_1:+10926788 | None:intergenic |
| GGTACAAGATTTATGCAGAA+GGG | 0.544570 | 8_1:-10925404 | Msa1178250:CDS |
| AAGAAAAGGAGAATTTAATA+CGG | 0.545091 | 8_1:-10924200 | Msa1178250:CDS |
| ATGTTTCCTTGCACCACGCA+AGG | 0.545435 | 8_1:+10924317 | None:intergenic |
| CCATGAATAAAGAGTTATAG+TGG | 0.549650 | 8_1:-10924161 | None:intergenic |
| ACAAGAGAAATGGTTGAAAG+AGG | 0.550127 | 8_1:-10926674 | Msa1178250:CDS |
| TTGCAATTTAGTGGGAATTG+AGG | 0.550148 | 8_1:+10926836 | None:intergenic |
| AGAATATGGTTACTTTGTCA+AGG | 0.554555 | 8_1:+10925202 | None:intergenic |
| TCCATGAAGATCTTAAACCA+TGG | 0.568320 | 8_1:-10926712 | Msa1178250:CDS |
| ATGCAAAATCTTATCAAACA+AGG | 0.570824 | 8_1:-10926592 | Msa1178250:CDS |
| TAAGGAGAAGGCATTGTGCA+TGG | 0.571719 | 8_1:+10924252 | None:intergenic |
| GAAGTAATTTGGACATGATG+AGG | 0.572075 | 8_1:+10926742 | None:intergenic |
| GACTTACAAGGTCAATCCAA+TGG | 0.574254 | 8_1:+10930084 | None:intergenic |
| CAACAAGAATGTCAAATGGA+AGG | 0.574995 | 8_1:-10925837 | Msa1178250:CDS |
| TTTCCCTTCCAAAATGCGTA+AGG | 0.576071 | 8_1:+10925806 | None:intergenic |
| TGCAAAATCTTATCAAACAA+GGG | 0.578981 | 8_1:-10926591 | Msa1178250:CDS |
| ATAGGCCAATAGTGCTGCAA+AGG | 0.583181 | 8_1:+10925282 | None:intergenic |
| CCATGAAGATCTTAAACCAT+GGG | 0.585334 | 8_1:-10926711 | Msa1178250:CDS |
| AGGTACAAGATTTATGCAGA+AGG | 0.585736 | 8_1:-10925405 | Msa1178250:CDS |
| AGGCTCTATGAACATGGTCA+TGG | 0.589938 | 8_1:+10925338 | None:intergenic |
| CTGAGCTCCACATAAGACCA+TGG | 0.593513 | 8_1:-10925889 | Msa1178250:CDS |
| TTTAGGCTTGTGGTTGTGGG+TGG | 0.594497 | 8_1:-10926635 | Msa1178250:CDS |
| AATACCAGAAGGAGCAGTTG+AGG | 0.596822 | 8_1:-10924364 | Msa1178250:CDS |
| TGAAGAGATTAAGTTTGCTG+TGG | 0.597774 | 8_1:-10925241 | Msa1178250:CDS |
| GAGATGAAATGTTGTTGGGT+AGG | 0.604359 | 8_1:+10926781 | None:intergenic |
| GTACAAGATTTATGCAGAAG+GGG | 0.604983 | 8_1:-10925403 | Msa1178250:CDS |
| AGGGATGTGTTCACAATATG+GGG | 0.609928 | 8_1:-10926572 | Msa1178250:CDS |
| CATGTTCCTTGCGTGGTGCA+AGG | 0.615342 | 8_1:-10924323 | Msa1178250:CDS |
| ACATTACGCAATATACAAGA+AGG | 0.621681 | 8_1:-10925860 | Msa1178250:CDS |
| TAATACGGCAAGTGAAGACA+AGG | 0.621694 | 8_1:-10924185 | Msa1178250:CDS |
| GAAGCTTTACCAACCCCAGA+AGG | 0.627314 | 8_1:+10926367 | None:intergenic |
| TGAGCTCCACATAAGACCAT+GGG | 0.632573 | 8_1:-10925888 | Msa1178250:CDS |
| TAATTTGGACATGATGAGGA+TGG | 0.632954 | 8_1:+10926746 | None:intergenic |
| TTTATGCAGAAGGGGCAACA+TGG | 0.637122 | 8_1:-10925395 | Msa1178250:CDS |
| GTACTTAGGCTCTATGAACA+TGG | 0.640258 | 8_1:+10925332 | None:intergenic |
| GTGCATGGAGGTGTATCACT+TGG | 0.687133 | 8_1:+10924267 | None:intergenic |
| AGTATGGCATGTTCCTTGCG+TGG | 0.688064 | 8_1:-10924330 | Msa1178250:CDS |
| GGAGAAGGCATTGTGCATGG+AGG | 0.725676 | 8_1:+10924255 | None:intergenic |
| AATACGGCAAGTGAAGACAA+GGG | 0.753746 | 8_1:-10924184 | Msa1178250:CDS |
| CTGGAGCTAATGTTTCAATG+TGG | 0.797690 | 8_1:-10926506 | Msa1178250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATAATATTTTAAAATT+TGG | - | chr8_1:10928245-10928264 | Msa1178250:intron | 0.0% |
| !!! | TACAAAAGTTTTTTTTTTTT+TGG | - | chr8_1:10924771-10924790 | Msa1178250:intron | 10.0% |
| !!! | TTAAATAATACTTTTTCAAT+TGG | - | chr8_1:10926174-10926193 | Msa1178250:intron | 10.0% |
| !!! | TTTTTTATTTAATTACAAAG+AGG | - | chr8_1:10926248-10926267 | Msa1178250:intron | 10.0% |
| !!! | TTTTTATTTAATTACAAAGA+GGG | - | chr8_1:10926249-10926268 | Msa1178250:intron | 10.0% |
| !! | TTAAAAATTACTAATTTCAA+AGG | + | chr8_1:10926581-10926600 | None:intergenic | 10.0% |
| !! | TTTATTTGTTTATTAGTTAT+TGG | + | chr8_1:10926608-10926627 | None:intergenic | 10.0% |
| !!! | ATATTAATTCATCATTTTAA+TGG | + | chr8_1:10927065-10927084 | None:intergenic | 10.0% |
| !! | TTAAAATGATGAATTAATAT+TGG | - | chr8_1:10927065-10927084 | Msa1178250:intron | 10.0% |
| !! | TAAAATGATGAATTAATATT+GGG | - | chr8_1:10927066-10927085 | Msa1178250:intron | 10.0% |
| !!! | TTTACATTTTTTTCTTTTTA+GGG | - | chr8_1:10928452-10928471 | Msa1178250:intron | 10.0% |
| !!! | AAAACTTTTTTTTTTAAACT+CGG | + | chr8_1:10929655-10929674 | None:intergenic | 10.0% |
| !!! | AACGTTTGTATATAATATTT+TGG | - | chr8_1:10925097-10925116 | Msa1178250:intron | 15.0% |
| !!! | ACGTTTGTATATAATATTTT+GGG | - | chr8_1:10925098-10925117 | Msa1178250:intron | 15.0% |
| !! | AACAAAAAACATATTAAGAA+AGG | - | chr8_1:10925185-10925204 | Msa1178250:intron | 15.0% |
| !! | ACAAAAAACATATTAAGAAA+GGG | - | chr8_1:10925186-10925205 | Msa1178250:intron | 15.0% |
| !!! | ATATTTTTTAGTTATCAAGA+AGG | + | chr8_1:10925353-10925372 | None:intergenic | 15.0% |
| !!! | AAATAATATTTTGCAAACAT+TGG | + | chr8_1:10925873-10925892 | None:intergenic | 15.0% |
| !! | AAATATTATTTAACACATGT+CGG | - | chr8_1:10925882-10925901 | Msa1178250:CDS | 15.0% |
| !! | GTATTATTTAAAAAACAACT+TGG | + | chr8_1:10926165-10926184 | None:intergenic | 15.0% |
| !! | AAAATGATGAATTAATATTG+GGG | - | chr8_1:10927067-10927086 | Msa1178250:intron | 15.0% |
| !! | TACATTTAATTCCAATTAAA+GGG | + | chr8_1:10928027-10928046 | None:intergenic | 15.0% |
| !! | ATACATTTAATTCCAATTAA+AGG | + | chr8_1:10928028-10928047 | None:intergenic | 15.0% |
| !!! | AAGTCATATTTTGTTTTTTT+TGG | - | chr8_1:10928055-10928074 | Msa1178250:intron | 15.0% |
| !!! | GTTTACATTTTTTTCTTTTT+AGG | - | chr8_1:10928451-10928470 | Msa1178250:intron | 15.0% |
| !! | ATACAACAAAACAAAAAGAT+GGG | - | chr8_1:10924193-10924212 | Msa1178250:CDS | 20.0% |
| !!! | TAAAATGATATTTTCCTTAC+TGG | + | chr8_1:10924517-10924536 | None:intergenic | 20.0% |
| !! | AAGTTACAATAAAATGTAAG+AGG | - | chr8_1:10925048-10925067 | Msa1178250:intron | 20.0% |
| !!! | CGTTTGTATATAATATTTTG+GGG | - | chr8_1:10925099-10925118 | Msa1178250:intron | 20.0% |
| !!! | GTTTTTGATGAAAATTCATT+TGG | - | chr8_1:10925971-10925990 | Msa1178250:intron | 20.0% |
| !! | TAAATAAAAAAATTGAGCTG+AGG | + | chr8_1:10926091-10926110 | None:intergenic | 20.0% |
| !!! | TCAGCTCAATTTTTTTATTT+AGG | - | chr8_1:10926090-10926109 | Msa1178250:intron | 20.0% |
| !!! | ATACTTTTTCAATTGGAATA+TGG | - | chr8_1:10926181-10926200 | Msa1178250:intron | 20.0% |
| !! | TAATTACTATGCATTCTTTA+TGG | + | chr8_1:10926501-10926520 | None:intergenic | 20.0% |
| !! | AAAATTACTAATTTCAAAGG+AGG | + | chr8_1:10926578-10926597 | None:intergenic | 20.0% |
| !! | AAATATAATGAGGATGATAA+TGG | + | chr8_1:10926757-10926776 | None:intergenic | 20.0% |
| !! | TTGTTAAAGATATGAATGAA+GGG | + | chr8_1:10926927-10926946 | None:intergenic | 20.0% |
| !! | ATTGTTAAAGATATGAATGA+AGG | + | chr8_1:10926928-10926947 | None:intergenic | 20.0% |
| !!! | ATCTTTAACAATCTTTTTCT+TGG | - | chr8_1:10926936-10926955 | Msa1178250:intron | 20.0% |
| !! | TTAATTAGTATATAGATCGA+AGG | - | chr8_1:10927260-10927279 | Msa1178250:intron | 20.0% |
| !!! | TAAATCATTTTGATTTTAGG+TGG | + | chr8_1:10928193-10928212 | None:intergenic | 20.0% |
| !! | ACCTAAAATCAAAATGATTT+AGG | - | chr8_1:10928192-10928211 | Msa1178250:intron | 20.0% |
| !! | GTTTGTGTTGAAATTATTTA+TGG | + | chr8_1:10928289-10928308 | None:intergenic | 20.0% |
| !!! | TTTTTATGATTATTTGTGCA+TGG | - | chr8_1:10928348-10928367 | Msa1178250:intron | 20.0% |
| !! | TCTAATTAAAGTGAAATAGA+AGG | - | chr8_1:10928413-10928432 | Msa1178250:intron | 20.0% |
| !! | AAAATTATTTGCATACCTAT+AGG | + | chr8_1:10928822-10928841 | None:intergenic | 20.0% |
| !!! | TGATAATATAGTTTTGTTCT+GGG | - | chr8_1:10929309-10929328 | Msa1178250:intron | 20.0% |
| !! | AAACATAACCTTAGTTTAAT+TGG | - | chr8_1:10929719-10929738 | Msa1178250:intron | 20.0% |
| !! | AGTAATTAACCAGTAAATAT+TGG | + | chr8_1:10929762-10929781 | None:intergenic | 20.0% |
| !! | AAGAAAAGGAGAATTTAATA+CGG | - | chr8_1:10930164-10930183 | Msa1178250:CDS | 20.0% |
| ! | CATACAACAAAACAAAAAGA+TGG | - | chr8_1:10924192-10924211 | Msa1178250:CDS | 25.0% |
| ! | AAAGAAAAACAAGAAGATGA+AGG | + | chr8_1:10924240-10924259 | None:intergenic | 25.0% |
| ! | TTTGAACAATTGAGTTATGT+TGG | - | chr8_1:10924465-10924484 | Msa1178250:CDS | 25.0% |
| ! | AATTAATTTCTTGTCCAGTA+AGG | - | chr8_1:10924500-10924519 | Msa1178250:intron | 25.0% |
| ! | AGTATTAAGATTGCTTATAC+TGG | - | chr8_1:10924691-10924710 | Msa1178250:intron | 25.0% |
| ! | AATAAAATGTAAGAGGTTGT+TGG | - | chr8_1:10925055-10925074 | Msa1178250:intron | 25.0% |
| ! | ATAAAATGTAAGAGGTTGTT+GGG | - | chr8_1:10925056-10925075 | Msa1178250:intron | 25.0% |
| ! | ACTTTACATTTCTCTTAAGA+TGG | - | chr8_1:10925124-10925143 | Msa1178250:intron | 25.0% |
| !! | TTTTTGTAAGAGTCAACTTT+GGG | - | chr8_1:10925157-10925176 | Msa1178250:intron | 25.0% |
| ! | AATAAATAACTCACTTAACC+TGG | - | chr8_1:10925230-10925249 | Msa1178250:CDS | 25.0% |
| ! | TTCTTGCATGTAAAAAACAT+GGG | + | chr8_1:10925446-10925465 | None:intergenic | 25.0% |
| ! | ATTCTTGCATGTAAAAAACA+TGG | + | chr8_1:10925447-10925466 | None:intergenic | 25.0% |
| ! | CATAGCTATATAAAAACTGT+TGG | - | chr8_1:10925538-10925557 | Msa1178250:intron | 25.0% |
| ! | GTACTAAATCTAGAAAAACA+AGG | - | chr8_1:10925682-10925701 | Msa1178250:intron | 25.0% |
| ! | GAAAAACAAGGAAATAATGT+TGG | - | chr8_1:10925694-10925713 | Msa1178250:intron | 25.0% |
| ! | AAAACATCATGAGGAATAAA+TGG | - | chr8_1:10925769-10925788 | Msa1178250:CDS | 25.0% |
| ! | TTTGTTACAAGTCATGTATA+AGG | + | chr8_1:10925833-10925852 | None:intergenic | 25.0% |
| !! | AACATTGGTCTATAACTAAA+GGG | + | chr8_1:10925858-10925877 | None:intergenic | 25.0% |
| !! | AAACATTGGTCTATAACTAA+AGG | + | chr8_1:10925859-10925878 | None:intergenic | 25.0% |
| !! | TTGTTATCTGGCTTATAAAA+AGG | - | chr8_1:10926136-10926155 | Msa1178250:intron | 25.0% |
| !! | TGTTATCTGGCTTATAAAAA+GGG | - | chr8_1:10926137-10926156 | Msa1178250:intron | 25.0% |
| ! | TATTTAATTACAAAGAGGGT+CGG | - | chr8_1:10926253-10926272 | Msa1178250:intron | 25.0% |
| !!! | TTATAGTTTTAGAAAGCCTA+AGG | + | chr8_1:10926383-10926402 | None:intergenic | 25.0% |
| ! | GTTATAGATGTTACATACTT+TGG | - | chr8_1:10926870-10926889 | Msa1178250:CDS | 25.0% |
| ! | AATAAAAACAAAAACAGCCA+TGG | + | chr8_1:10926896-10926915 | None:intergenic | 25.0% |
| ! | TCAATATGTCACATACTAAT+GGG | + | chr8_1:10927001-10927020 | None:intergenic | 25.0% |
| ! | ATCAATATGTCACATACTAA+TGG | + | chr8_1:10927002-10927021 | None:intergenic | 25.0% |
| !!! | TTAGCATTACATTTTGATGT+AGG | - | chr8_1:10927297-10927316 | Msa1178250:intron | 25.0% |
| ! | TTTCATTGTTGCAATTTAGT+GGG | + | chr8_1:10927539-10927558 | None:intergenic | 25.0% |
| !! | GAAAAAACATGTCACATTTT+AGG | - | chr8_1:10927712-10927731 | Msa1178250:intron | 25.0% |
| ! | ATGCAAAATCTTATCAAACA+AGG | - | chr8_1:10927772-10927791 | Msa1178250:intron | 25.0% |
| ! | TGCAAAATCTTATCAAACAA+GGG | - | chr8_1:10927773-10927792 | Msa1178250:intron | 25.0% |
| ! | TGGACAAGAAAAAATTTCAA+GGG | - | chr8_1:10927895-10927914 | Msa1178250:intron | 25.0% |
| ! | TCTCCACAATAATGAAAAAT+AGG | + | chr8_1:10927942-10927961 | None:intergenic | 25.0% |
| ! | ATTGGAATTAAATGTATCAC+TGG | - | chr8_1:10928031-10928050 | Msa1178250:intron | 25.0% |
| !!! | GCCTAAATCATTTTGATTTT+AGG | + | chr8_1:10928196-10928215 | None:intergenic | 25.0% |
| !!! | TTTTCGAGTTCTTTTCTAAT+GGG | + | chr8_1:10928597-10928616 | None:intergenic | 25.0% |
| !! | TGAATTTCGTCTTTGAAAAA+TGG | + | chr8_1:10928717-10928736 | None:intergenic | 25.0% |
| ! | AAATTTCCAAGACACAAAAT+TGG | - | chr8_1:10928784-10928803 | Msa1178250:intron | 25.0% |
| !! | ATGTGTCATGTTTTATGTTA+AGG | - | chr8_1:10928939-10928958 | Msa1178250:intron | 25.0% |
| ! | GTAAAGAAATCATAGTACTT+AGG | + | chr8_1:10929049-10929068 | None:intergenic | 25.0% |
| ! | TAGAACATTGAGAAAGAATA+TGG | + | chr8_1:10929179-10929198 | None:intergenic | 25.0% |
| !!! | CTGATAATATAGTTTTGTTC+TGG | - | chr8_1:10929308-10929327 | Msa1178250:intron | 25.0% |
| ! | AATTGAGTCCAATTAAACTA+AGG | + | chr8_1:10929730-10929749 | None:intergenic | 25.0% |
| ! | TTAAATTCTCTTGCTTACTA+AGG | - | chr8_1:10929808-10929827 | Msa1178250:intron | 25.0% |
| ! | CAAATTATCTATGATGTAGT+TGG | + | chr8_1:10929906-10929925 | None:intergenic | 25.0% |
| ! | TCATCAATTTCTACAAGAAA+AGG | - | chr8_1:10930150-10930169 | Msa1178250:CDS | 25.0% |
| ! | TTGATGAAAGCTTTGACTAT+TGG | + | chr8_1:10924171-10924190 | None:intergenic | 30.0% |
| CATCAGAAGCTATAAACTAA+AGG | + | chr8_1:10924363-10924382 | None:intergenic | 30.0% | |
| !!! | TAGTTGCTTCCTGATTTTTT+TGG | - | chr8_1:10924389-10924408 | Msa1178250:CDS | 30.0% |
| TTGGTACTTCCAAAAAAATC+AGG | + | chr8_1:10924401-10924420 | None:intergenic | 30.0% | |
| GAGACAAACAAAATTTGAGT+TGG | + | chr8_1:10924420-10924439 | None:intergenic | 30.0% | |
| TTTGGATAAGAGAACTTAAG+AGG | + | chr8_1:10924662-10924681 | None:intergenic | 30.0% | |
| CTTAATACTGTGAGTATGTT+TGG | + | chr8_1:10924680-10924699 | None:intergenic | 30.0% | |
| !! | TTTTTGGTATATGTGCACTA+AGG | - | chr8_1:10924787-10924806 | Msa1178250:intron | 30.0% |
| !!! | ATGTGCACTAAGGTTTTATT+TGG | - | chr8_1:10924797-10924816 | Msa1178250:intron | 30.0% |
| TATTTGGTATATGTGCACTA+AGG | - | chr8_1:10924813-10924832 | Msa1178250:intron | 30.0% | |
| GAACTTGTATGACTTGAATT+TGG | - | chr8_1:10924860-10924879 | Msa1178250:intron | 30.0% | |
| TTGGGAATAAACCAAACTAT+TGG | - | chr8_1:10925074-10925093 | Msa1178250:intron | 30.0% | |
| ATACAAACGTTCCAATAGTT+TGG | + | chr8_1:10925088-10925107 | None:intergenic | 30.0% | |
| ! | GTTTTTGTAAGAGTCAACTT+TGG | - | chr8_1:10925156-10925175 | Msa1178250:intron | 30.0% |
| TAAACAAACATCATCTTACC+AGG | + | chr8_1:10925251-10925270 | None:intergenic | 30.0% | |
| AAGGAAATAATGTTGGAGTT+TGG | - | chr8_1:10925701-10925720 | Msa1178250:intron | 30.0% | |
| ! | ACATTGGTCTATAACTAAAG+GGG | + | chr8_1:10925857-10925876 | None:intergenic | 30.0% |
| TGCACAACTATATTGAAGTT+AGG | - | chr8_1:10926032-10926051 | Msa1178250:intron | 30.0% | |
| CTATTAGTACGATTGTTATC+TGG | - | chr8_1:10926124-10926143 | Msa1178250:intron | 30.0% | |
| TGCATTCTTTATGGATATCA+CGG | + | chr8_1:10926492-10926511 | None:intergenic | 30.0% | |
| CATAGTAATTAGTACCATTG+TGG | - | chr8_1:10926510-10926529 | Msa1178250:CDS | 30.0% | |
| TAATTAGTACCATTGTGGTT+AGG | - | chr8_1:10926515-10926534 | Msa1178250:CDS | 30.0% | |
| CTTAGAATTCTACAAGCTAA+TGG | + | chr8_1:10926657-10926676 | None:intergenic | 30.0% | |
| !! | CATTAGCTTGTAGAATTCTA+AGG | - | chr8_1:10926655-10926674 | Msa1178250:CDS | 30.0% |
| AGCTTGCAACAAATATAATG+AGG | + | chr8_1:10926767-10926786 | None:intergenic | 30.0% | |
| TGAAATATGAGAGACTTACA+AGG | + | chr8_1:10926809-10926828 | None:intergenic | 30.0% | |
| AATTATGACAATTGAGGGAA+AGG | + | chr8_1:10926976-10926995 | None:intergenic | 30.0% | |
| ACCAGATTGAAAAAATCTCA+CGG | - | chr8_1:10927113-10927132 | Msa1178250:intron | 30.0% | |
| TCTTTAGTTACATTTCGTCA+TGG | - | chr8_1:10927228-10927247 | Msa1178250:intron | 30.0% | |
| ! | AATAGTAGTGCTTGTTACTT+TGG | + | chr8_1:10927469-10927488 | None:intergenic | 30.0% |
| GTTTCATTGTTGCAATTTAG+TGG | + | chr8_1:10927540-10927559 | None:intergenic | 30.0% | |
| CATTGAGATGAAATGTTGTT+GGG | + | chr8_1:10927590-10927609 | None:intergenic | 30.0% | |
| TCATTGAGATGAAATGTTGT+TGG | + | chr8_1:10927591-10927610 | None:intergenic | 30.0% | |
| CATGTCCAAATTACTTCAAA+TGG | - | chr8_1:10927628-10927647 | Msa1178250:intron | 30.0% | |
| ! | TGGATCCATTTGAAGTAATT+TGG | + | chr8_1:10927636-10927655 | None:intergenic | 30.0% |
| ! | GGGGAATTTTACAACTTTTA+AGG | - | chr8_1:10927811-10927830 | Msa1178250:intron | 30.0% |
| TCAATGTGGTGATAAAAATG+TGG | - | chr8_1:10927872-10927891 | Msa1178250:intron | 30.0% | |
| GTGGACAAGAAAAAATTTCA+AGG | - | chr8_1:10927894-10927913 | Msa1178250:intron | 30.0% | |
| CAATAATGAAAAATAGGTGG+AGG | + | chr8_1:10927936-10927955 | None:intergenic | 30.0% | |
| CCACAATAATGAAAAATAGG+TGG | + | chr8_1:10927939-10927958 | None:intergenic | 30.0% | |
| !! | CCACCTATTTTTCATTATTG+TGG | - | chr8_1:10927936-10927955 | Msa1178250:intron | 30.0% |
| !! | TTGACATTGTTTTTCCTGAT+TGG | - | chr8_1:10927973-10927992 | Msa1178250:intron | 30.0% |
| AAGCTTCTATTCCCTTTAAT+TGG | - | chr8_1:10928013-10928032 | Msa1178250:intron | 30.0% | |
| ACATTACGCAATATACAAGA+AGG | - | chr8_1:10928504-10928523 | Msa1178250:intron | 30.0% | |
| ! | ATAGAATACCTTACGCATTT+TGG | - | chr8_1:10928550-10928569 | Msa1178250:intron | 30.0% |
| !!! | CTTTTCGAGTTCTTTTCTAA+TGG | + | chr8_1:10928598-10928617 | None:intergenic | 30.0% |
| ! | GATTTTCCAATTTTGTGTCT+TGG | + | chr8_1:10928793-10928812 | None:intergenic | 30.0% |
| TGGAAAATCAATGTACCTAT+AGG | - | chr8_1:10928804-10928823 | Msa1178250:intron | 30.0% | |
| ! | AATCTCTTCACACATGTTTT+TGG | + | chr8_1:10929113-10929132 | None:intergenic | 30.0% |
| TTGTTCCACAATAACCAATT+TGG | - | chr8_1:10929445-10929464 | Msa1178250:intron | 30.0% | |
| TGTTCCACAATAACCAATTT+GGG | - | chr8_1:10929446-10929465 | Msa1178250:intron | 30.0% | |
| AAGGTTATGTTTGTGTATGT+AGG | + | chr8_1:10929711-10929730 | None:intergenic | 30.0% | |
| ACATTCTAGCCAATATTTAC+TGG | - | chr8_1:10929750-10929769 | Msa1178250:intron | 30.0% | |
| TTACTAAGGAAAACAACACT+TGG | - | chr8_1:10929822-10929841 | Msa1178250:intron | 30.0% | |
| CCTGCAGTTAATAATATTGT+TGG | + | chr8_1:10929859-10929878 | None:intergenic | 30.0% | |
| CCAACAATATTATTAACTGC+AGG | - | chr8_1:10929856-10929875 | Msa1178250:intron | 30.0% | |
| TTCAAACCAAAAATACCAGA+AGG | - | chr8_1:10929989-10930008 | Msa1178250:intron | 30.0% | |
| !! | TGAAGAGTTTGAGTTGTATA+AGG | + | chr8_1:10930133-10930152 | None:intergenic | 30.0% |
| CAAGAAGATGAAGGAGAATA+AGG | + | chr8_1:10924231-10924250 | None:intergenic | 35.0% | |
| TAAGCACTTTGATCATCCAT+TGG | - | chr8_1:10924264-10924283 | Msa1178250:CDS | 35.0% | |
| GAGATAGCATATGACTTACA+AGG | + | chr8_1:10924295-10924314 | None:intergenic | 35.0% | |
| TGCATGTAAAAAACATGGGA+TGG | + | chr8_1:10925442-10925461 | None:intergenic | 35.0% | |
| GTTGGAAATTAGAGCTATGA+TGG | - | chr8_1:10925556-10925575 | Msa1178250:intron | 35.0% | |
| !!! | TAGACATGTGCTCCTTTTTT+AGG | + | chr8_1:10925615-10925634 | None:intergenic | 35.0% |
| ! | AAAAAAGGAGCACATGTCTA+TGG | - | chr8_1:10925615-10925634 | Msa1178250:intron | 35.0% |
| CATCATGAGGAATAAATGGT+TGG | - | chr8_1:10925773-10925792 | Msa1178250:CDS | 35.0% | |
| TTGAAGTTAGGATATGTGCT+TGG | - | chr8_1:10926044-10926063 | Msa1178250:intron | 35.0% | |
| CAAATACTCGACTCAAAAGT+GGG | + | chr8_1:10926281-10926300 | None:intergenic | 35.0% | |
| ATTCTTTATGGATATCACGG+AGG | + | chr8_1:10926489-10926508 | None:intergenic | 35.0% | |
| CACTATTATCCTAACCACAA+TGG | + | chr8_1:10926527-10926546 | None:intergenic | 35.0% | |
| AAACAGTTGCATCATGCAAT+TGG | - | chr8_1:10926627-10926646 | Msa1178250:CDS | 35.0% | |
| CAGTGAATTGAATATGCGAA+AGG | + | chr8_1:10926685-10926704 | None:intergenic | 35.0% | |
| TTCGCATATTCAATTCACTG+AGG | - | chr8_1:10926685-10926704 | Msa1178250:CDS | 35.0% | |
| TGTTGAACATAATGACGAGA+TGG | - | chr8_1:10926721-10926740 | Msa1178250:CDS | 35.0% | |
| !! | AATGAGGATGATAATGGAGA+AGG | + | chr8_1:10926751-10926770 | None:intergenic | 35.0% |
| ! | TGTTGCAAGCTCTTTTATCT+TGG | - | chr8_1:10926776-10926795 | Msa1178250:CDS | 35.0% |
| GGGAGAATTATGACAATTGA+GGG | + | chr8_1:10926981-10927000 | None:intergenic | 35.0% | |
| TGGGAGAATTATGACAATTG+AGG | + | chr8_1:10926982-10927001 | None:intergenic | 35.0% | |
| TGACATATTGATGAAGAGAG+TGG | - | chr8_1:10927010-10927029 | Msa1178250:intron | 35.0% | |
| !!! | ACCGTGAGATTTTTTCAATC+TGG | + | chr8_1:10927117-10927136 | None:intergenic | 35.0% |
| GATTGAAAAAATCTCACGGT+CGG | - | chr8_1:10927117-10927136 | Msa1178250:intron | 35.0% | |
| TTGCAATTTAGTGGGAATTG+AGG | + | chr8_1:10927531-10927550 | None:intergenic | 35.0% | |
| TAATTTGGACATGATGAGGA+TGG | + | chr8_1:10927621-10927640 | None:intergenic | 35.0% | |
| GAAGTAATTTGGACATGATG+AGG | + | chr8_1:10927625-10927644 | None:intergenic | 35.0% | |
| TCCATGAAGATCTTAAACCA+TGG | - | chr8_1:10927652-10927671 | Msa1178250:intron | 35.0% | |
| CCATGAAGATCTTAAACCAT+GGG | - | chr8_1:10927653-10927672 | Msa1178250:intron | 35.0% | |
| TACAGGAATCACAAGAGAAA+TGG | - | chr8_1:10927680-10927699 | Msa1178250:intron | 35.0% | |
| ACAAGAGAAATGGTTGAAAG+AGG | - | chr8_1:10927690-10927709 | Msa1178250:intron | 35.0% | |
| AAGGGATGTGTTCACAATAT+GGG | - | chr8_1:10927791-10927810 | Msa1178250:intron | 35.0% | |
| ATGTGGTGATAAAAATGTGG+TGG | - | chr8_1:10927875-10927894 | Msa1178250:intron | 35.0% | |
| ! | AGAAGCAGTTAAGATTTGCT+TGG | - | chr8_1:10928164-10928183 | Msa1178250:intron | 35.0% |
| AAGGCAACAAGAATGTCAAA+TGG | - | chr8_1:10928523-10928542 | Msa1178250:intron | 35.0% | |
| CAACAAGAATGTCAAATGGA+AGG | - | chr8_1:10928527-10928546 | Msa1178250:intron | 35.0% | |
| ! | AATACCTTACGCATTTTGGA+AGG | - | chr8_1:10928554-10928573 | Msa1178250:intron | 35.0% |
| !! | ATACCTTACGCATTTTGGAA+GGG | - | chr8_1:10928555-10928574 | Msa1178250:intron | 35.0% |
| AGCATTCCAATCATGTTCTT+CGG | + | chr8_1:10928631-10928650 | None:intergenic | 35.0% | |
| ! | TTTTTGCTCCTTTTCAGCAA+TGG | - | chr8_1:10928744-10928763 | Msa1178250:intron | 35.0% |
| AGGTACAAGATTTATGCAGA+AGG | - | chr8_1:10928959-10928978 | Msa1178250:intron | 35.0% | |
| GGTACAAGATTTATGCAGAA+GGG | - | chr8_1:10928960-10928979 | Msa1178250:intron | 35.0% | |
| GTACAAGATTTATGCAGAAG+GGG | - | chr8_1:10928961-10928980 | Msa1178250:intron | 35.0% | |
| !! | TGAAGAGATTAAGTTTGCTG+TGG | - | chr8_1:10929123-10929142 | Msa1178250:intron | 35.0% |
| !! | AGATTAAGTTTGCTGTGGAT+TGG | - | chr8_1:10929128-10929147 | Msa1178250:intron | 35.0% |
| !! | GATTAAGTTTGCTGTGGATT+GGG | - | chr8_1:10929129-10929148 | Msa1178250:intron | 35.0% |
| !! | ATTAAGTTTGCTGTGGATTG+GGG | - | chr8_1:10929130-10929149 | Msa1178250:intron | 35.0% |
| ATTCTCTTCGATGCCAATTT+AGG | - | chr8_1:10929388-10929407 | Msa1178250:intron | 35.0% | |
| CTAAATTAGCCCACCTAAAT+TGG | + | chr8_1:10929404-10929423 | None:intergenic | 35.0% | |
| GTTCCACAATAACCAATTTG+GGG | - | chr8_1:10929447-10929466 | Msa1178250:intron | 35.0% | |
| ACTACTGAAATTGACACTAG+GGG | + | chr8_1:10929535-10929554 | None:intergenic | 35.0% | |
| GACTACTGAAATTGACACTA+GGG | + | chr8_1:10929536-10929555 | None:intergenic | 35.0% | |
| TGACTACTGAAATTGACACT+AGG | + | chr8_1:10929537-10929556 | None:intergenic | 35.0% | |
| ! | TGCATGGTTCAACTTCATTT+TGG | + | chr8_1:10929681-10929700 | None:intergenic | 35.0% |
| TAACTGCAGGCACAAAAAAT+TGG | - | chr8_1:10929869-10929888 | Msa1178250:intron | 35.0% | |
| AAGGAAACATTTCATGGTTG+AGG | - | chr8_1:10930060-10930079 | Msa1178250:intron | 35.0% | |
| AGGAAACATTTCATGGTTGA+GGG | - | chr8_1:10930061-10930080 | Msa1178250:intron | 35.0% | |
| !! | GTTTGAGTTGTATAAGGAGA+AGG | + | chr8_1:10930127-10930146 | None:intergenic | 35.0% |
| GACTTACAAGGTCAATCCAA+TGG | + | chr8_1:10924283-10924302 | None:intergenic | 40.0% | |
| GACGAATGGGTAAAACACTA+CGG | - | chr8_1:10925582-10925601 | Msa1178250:CDS | 40.0% | |
| AATTGCCATCCTTCAATCGA+CGG | + | chr8_1:10925659-10925678 | None:intergenic | 40.0% | |
| GTGTAGAGGAAAACATCATG+AGG | - | chr8_1:10925760-10925779 | Msa1178250:CDS | 40.0% | |
| CCAAATACTCGACTCAAAAG+TGG | + | chr8_1:10926282-10926301 | None:intergenic | 40.0% | |
| !! | CCACTTTTGAGTCGAGTATT+TGG | - | chr8_1:10926279-10926298 | Msa1178250:intron | 40.0% |
| ! | TAAGGATGAAGAGGGTTTTG+CGG | + | chr8_1:10926365-10926384 | None:intergenic | 40.0% |
| AGAAAGCCTAAGGATGAAGA+GGG | + | chr8_1:10926373-10926392 | None:intergenic | 40.0% | |
| TAGAAAGCCTAAGGATGAAG+AGG | + | chr8_1:10926374-10926393 | None:intergenic | 40.0% | |
| GATGTTACATACTTTGGCCA+TGG | - | chr8_1:10926876-10926895 | Msa1178250:CDS | 40.0% | |
| TGACAATTGAGGGAAAGGAA+AGG | + | chr8_1:10926971-10926990 | None:intergenic | 40.0% | |
| CATATTGATGAAGAGAGTGG+AGG | - | chr8_1:10927013-10927032 | Msa1178250:intron | 40.0% | |
| TAATATTGGGGCAATCTGAG+AGG | - | chr8_1:10927079-10927098 | Msa1178250:intron | 40.0% | |
| AATATTGGGGCAATCTGAGA+GGG | - | chr8_1:10927080-10927099 | Msa1178250:intron | 40.0% | |
| AACCTCTTGTCTCTATCTCA+GGG | + | chr8_1:10927165-10927184 | None:intergenic | 40.0% | |
| ! | AGATGGACAAGTTGAGTTTG+AGG | + | chr8_1:10927562-10927581 | None:intergenic | 40.0% |
| AATGTTGTTGGGTAGGAAGA+TGG | + | chr8_1:10927579-10927598 | None:intergenic | 40.0% | |
| GAGATGAAATGTTGTTGGGT+AGG | + | chr8_1:10927586-10927605 | None:intergenic | 40.0% | |
| ! | CCCATGGTTTAAGATCTTCA+TGG | + | chr8_1:10927656-10927675 | None:intergenic | 40.0% |
| CTTAAACCATGGGAGAATAC+AGG | - | chr8_1:10927663-10927682 | Msa1178250:intron | 40.0% | |
| ! | CATGTCACATTTTAGGCTTG+TGG | - | chr8_1:10927719-10927738 | Msa1178250:intron | 40.0% |
| ! | ACATTTTAGGCTTGTGGTTG+TGG | - | chr8_1:10927725-10927744 | Msa1178250:intron | 40.0% |
| ! | CATTTTAGGCTTGTGGTTGT+GGG | - | chr8_1:10927726-10927745 | Msa1178250:intron | 40.0% |
| CAAGGGATGTGTTCACAATA+TGG | - | chr8_1:10927790-10927809 | Msa1178250:intron | 40.0% | |
| AGGGATGTGTTCACAATATG+GGG | - | chr8_1:10927792-10927811 | Msa1178250:intron | 40.0% | |
| !!! | CAACTTTTAAGGTTGTACCC+TGG | - | chr8_1:10927822-10927841 | Msa1178250:intron | 40.0% |
| ! | CCAGATCAGGTATTTTTCCA+GGG | + | chr8_1:10927842-10927861 | None:intergenic | 40.0% |
| ! | TCCAGATCAGGTATTTTTCC+AGG | + | chr8_1:10927843-10927862 | None:intergenic | 40.0% |
| TGAAACATTAGCTCCAGATC+AGG | + | chr8_1:10927855-10927874 | None:intergenic | 40.0% | |
| CTGGAGCTAATGTTTCAATG+TGG | - | chr8_1:10927858-10927877 | Msa1178250:intron | 40.0% | |
| ! | TTTTTCCTGATTGGACCTTC+TGG | - | chr8_1:10927982-10928001 | Msa1178250:intron | 40.0% |
| ! | TTTTCCTGATTGGACCTTCT+GGG | - | chr8_1:10927983-10928002 | Msa1178250:intron | 40.0% |
| !! | TTGTTTCCCATGGTCTTATG+TGG | + | chr8_1:10928485-10928504 | None:intergenic | 40.0% |
| !! | TTGCGTAATGTTGTTTCCCA+TGG | + | chr8_1:10928495-10928514 | None:intergenic | 40.0% |
| TTTCCCTTCCAAAATGCGTA+AGG | + | chr8_1:10928561-10928580 | None:intergenic | 40.0% | |
| TTTCTAATGGGAGATACTGC+TGG | + | chr8_1:10928585-10928604 | None:intergenic | 40.0% | |
| ATGCATCCGAAGAACATGAT+TGG | - | chr8_1:10928622-10928641 | Msa1178250:intron | 40.0% | |
| TTACTCGAAACAAAAGCGAG+AGG | + | chr8_1:10928688-10928707 | None:intergenic | 40.0% | |
| GTACTTAGGCTCTATGAACA+TGG | + | chr8_1:10929035-10929054 | None:intergenic | 40.0% | |
| !!! | CACATGTTTTTGGCACTGAT+AGG | + | chr8_1:10929103-10929122 | None:intergenic | 40.0% |
| !!! | ATAGTTTTGTTCTGGGAGTG+TGG | - | chr8_1:10929316-10929335 | Msa1178250:intron | 40.0% |
| TCTTCGATGCCAATTTAGGT+GGG | - | chr8_1:10929392-10929411 | Msa1178250:intron | 40.0% | |
| CAACCCCAAATTGGTTATTG+TGG | + | chr8_1:10929453-10929472 | None:intergenic | 40.0% | |
| AAGATCTCAAACCAACCACT+AGG | + | chr8_1:10929477-10929496 | None:intergenic | 40.0% | |
| !! | TAGTGGTTGGTTTGAGATCT+TGG | - | chr8_1:10929476-10929495 | Msa1178250:intron | 40.0% |
| CTACTGAAATTGACACTAGG+GGG | + | chr8_1:10929534-10929553 | None:intergenic | 40.0% | |
| TATGAACAGACTAATCCGAG+TGG | + | chr8_1:10929623-10929642 | None:intergenic | 40.0% | |
| GTATGTAGGAACAAAGTGCA+TGG | + | chr8_1:10929697-10929716 | None:intergenic | 40.0% | |
| CAGGCACAAAAAATTGGAGA+AGG | - | chr8_1:10929875-10929894 | Msa1178250:intron | 40.0% | |
| GCACAAAAAATTGGAGAAGG+AGG | - | chr8_1:10929878-10929897 | Msa1178250:intron | 40.0% | |
| ! | ACTGCTCCTTCTGGTATTTT+TGG | + | chr8_1:10929998-10930017 | None:intergenic | 40.0% |
| TGAGGTTTGTCCTGAAAGTA+TGG | - | chr8_1:10930018-10930037 | Msa1178250:intron | 40.0% | |
| AAGGAACATGCCATACTTTC+AGG | + | chr8_1:10930031-10930050 | None:intergenic | 40.0% | |
| TGGTGCAAGGAAACATTTCA+TGG | - | chr8_1:10930054-10930073 | Msa1178250:intron | 40.0% | |
| TAATACGGCAAGTGAAGACA+AGG | - | chr8_1:10930179-10930198 | Msa1178250:CDS | 40.0% | |
| AATACGGCAAGTGAAGACAA+GGG | - | chr8_1:10930180-10930199 | Msa1178250:CDS | 40.0% | |
| TCTCACACACACTCACTTGT+TGG | - | chr8_1:10924442-10924461 | Msa1178250:CDS | 45.0% | |
| GATGGTCGCGCTATTATTGT+AGG | + | chr8_1:10925424-10925443 | None:intergenic | 45.0% | |
| ! | CATGTCTATGGTGTTAGTCG+CGG | - | chr8_1:10925627-10925646 | Msa1178250:intron | 45.0% |
| GCAAAGCAGTAGATGTGTAG+AGG | - | chr8_1:10925746-10925765 | Msa1178250:CDS | 45.0% | |
| TATGTGCTTGGCACATCTTG+TGG | - | chr8_1:10926056-10926075 | Msa1178250:intron | 45.0% | |
| CTTGGCACATCTTGTGGTTT+AGG | - | chr8_1:10926062-10926081 | Msa1178250:intron | 45.0% | |
| ! | AAGGATGAAGAGGGTTTTGC+GGG | + | chr8_1:10926364-10926383 | None:intergenic | 45.0% |
| GCAAAACCCTCTTCATCCTT+AGG | - | chr8_1:10926364-10926383 | Msa1178250:intron | 45.0% | |
| AAAAAATCTCACGGTCGGTG+AGG | - | chr8_1:10927122-10927141 | Msa1178250:intron | 45.0% | |
| AAAAATCTCACGGTCGGTGA+GGG | - | chr8_1:10927123-10927142 | Msa1178250:intron | 45.0% | |
| GAACCTCTTGTCTCTATCTC+AGG | + | chr8_1:10927166-10927185 | None:intergenic | 45.0% | |
| GTGATTCCTGTATTCTCCCA+TGG | + | chr8_1:10927672-10927691 | None:intergenic | 45.0% | |
| CCCTGGAAAAATACCTGATC+TGG | - | chr8_1:10927839-10927858 | Msa1178250:intron | 45.0% | |
| TTTCCTGATTGGACCTTCTG+GGG | - | chr8_1:10927984-10928003 | Msa1178250:intron | 45.0% | |
| TGAGCTCCACATAAGACCAT+GGG | - | chr8_1:10928476-10928495 | Msa1178250:intron | 45.0% | |
| ! | TCCTTTTCAGCAATGGCAAC+AGG | - | chr8_1:10928751-10928770 | Msa1178250:intron | 45.0% |
| TCCTGTTGCCATTGCTGAAA+AGG | + | chr8_1:10928755-10928774 | None:intergenic | 45.0% | |
| TTTATGCAGAAGGGGCAACA+TGG | - | chr8_1:10928969-10928988 | Msa1178250:intron | 45.0% | |
| AGGCTCTATGAACATGGTCA+TGG | + | chr8_1:10929029-10929048 | None:intergenic | 45.0% | |
| TGCTACCTTTGCAGCACTAT+TGG | - | chr8_1:10929077-10929096 | Msa1178250:intron | 45.0% | |
| ATAGGCCAATAGTGCTGCAA+AGG | + | chr8_1:10929085-10929104 | None:intergenic | 45.0% | |
| !! | TTGTTCTGGGAGTGTGGTAT+TGG | - | chr8_1:10929322-10929341 | Msa1178250:intron | 45.0% |
| !! | TGTGGTATTGGCTTGAGATC+TGG | - | chr8_1:10929334-10929353 | Msa1178250:intron | 45.0% |
| !! | GTGGTATTGGCTTGAGATCT+GGG | - | chr8_1:10929335-10929354 | Msa1178250:intron | 45.0% |
| !! | GAATCGATTCTGAGACCTCA+AGG | + | chr8_1:10929372-10929391 | None:intergenic | 45.0% |
| CTCTTCGATGCCAATTTAGG+TGG | - | chr8_1:10929391-10929410 | Msa1178250:intron | 45.0% | |
| ! | CTTGGAGTTTGCTTCTCTCA+AGG | - | chr8_1:10929494-10929513 | Msa1178250:intron | 45.0% |
| TTTAATGGGGCTCCTACAAG+TGG | - | chr8_1:10929583-10929602 | Msa1178250:intron | 45.0% | |
| TTAATGGGGCTCCTACAAGT+GGG | - | chr8_1:10929584-10929603 | Msa1178250:intron | 45.0% | |
| AATACCAGAAGGAGCAGTTG+AGG | - | chr8_1:10930000-10930019 | Msa1178250:intron | 45.0% | |
| ACATTTCATGGTTGAGGGCA+TGG | - | chr8_1:10930066-10930085 | Msa1178250:intron | 45.0% | |
| !! | TAAGGAGAAGGCATTGTGCA+TGG | + | chr8_1:10930115-10930134 | None:intergenic | 45.0% |
| !!! | TGAATTAATTTATTTATTTT+AGG | + | chr8_1:10924977-10924996 | None:intergenic | 5.0% |
| !!! | ATATTATAGTTTTTTTTTTT+TGG | + | chr8_1:10928134-10928153 | None:intergenic | 5.0% |
| ! | AGCTATGATGGCGAGACGAA+TGG | - | chr8_1:10925568-10925587 | Msa1178250:CDS | 50.0% |
| ! | GCTATGATGGCGAGACGAAT+GGG | - | chr8_1:10925569-10925588 | Msa1178250:CDS | 50.0% |
| GGGTAAAACACTACGGCGAT+CGG | - | chr8_1:10925589-10925608 | Msa1178250:CDS | 50.0% | |
| TACGGCGATCGGCCTAAAAA+AGG | - | chr8_1:10925600-10925619 | Msa1178250:CDS | 50.0% | |
| !! | GGAGTTTGGTGTTGCAGCAA+TGG | - | chr8_1:10925715-10925734 | Msa1178250:intron | 50.0% |
| AAAATCTCACGGTCGGTGAG+GGG | - | chr8_1:10927124-10927143 | Msa1178250:intron | 50.0% | |
| AGCCCTGAGATAGAGACAAG+AGG | - | chr8_1:10927160-10927179 | Msa1178250:intron | 50.0% | |
| TTTAGGCTTGTGGTTGTGGG+TGG | - | chr8_1:10927729-10927748 | Msa1178250:intron | 50.0% | |
| ! | GGTGGAGGTGACACATTTTC+TGG | + | chr8_1:10927921-10927940 | None:intergenic | 50.0% |
| GAAGCTTTACCAACCCCAGA+AGG | + | chr8_1:10928000-10928019 | None:intergenic | 50.0% | |
| CTGAGCTCCACATAAGACCA+TGG | - | chr8_1:10928475-10928494 | Msa1178250:intron | 50.0% | |
| CCACTAGGTCAACCCCAAAT+TGG | + | chr8_1:10929462-10929481 | None:intergenic | 50.0% | |
| ! | CCAATTTGGGGTTGACCTAG+TGG | - | chr8_1:10929459-10929478 | Msa1178250:intron | 50.0% |
| ! | TTTGGGGTTGACCTAGTGGT+TGG | - | chr8_1:10929463-10929482 | Msa1178250:intron | 50.0% |
| !!! | AGCCCTGCTCTGGCTTTTAA+TGG | - | chr8_1:10929568-10929587 | Msa1178250:intron | 50.0% |
| !!! | GCCCTGCTCTGGCTTTTAAT+GGG | - | chr8_1:10929569-10929588 | Msa1178250:intron | 50.0% |
| CCCCATTAAAAGCCAGAGCA+GGG | + | chr8_1:10929573-10929592 | None:intergenic | 50.0% | |
| !!! | CCCTGCTCTGGCTTTTAATG+GGG | - | chr8_1:10929570-10929589 | Msa1178250:intron | 50.0% |
| CAAACCTCAACTGCTCCTTC+TGG | + | chr8_1:10930007-10930026 | None:intergenic | 50.0% | |
| AGTATGGCATGTTCCTTGCG+TGG | - | chr8_1:10930034-10930053 | Msa1178250:intron | 50.0% | |
| ATGTTTCCTTGCACCACGCA+AGG | + | chr8_1:10930050-10930069 | None:intergenic | 50.0% | |
| ! | GTGCATGGAGGTGTATCACT+TGG | + | chr8_1:10930100-10930119 | None:intergenic | 50.0% |
| ! | TATGGTGTTAGTCGCGGCGT+TGG | - | chr8_1:10925633-10925652 | Msa1178250:intron | 55.0% |
| ! | GTTGGCCGTCGATTGAAGGA+TGG | - | chr8_1:10925651-10925670 | Msa1178250:intron | 55.0% |
| CAACCCCAGAAGGTCCAATC+AGG | + | chr8_1:10927990-10928009 | None:intergenic | 55.0% | |
| !! | CTGATTGGACCTTCTGGGGT+TGG | - | chr8_1:10927988-10928007 | Msa1178250:intron | 55.0% |
| ! | TGGGAGTGTGCTCTTCCTTG+AGG | - | chr8_1:10929354-10929373 | Msa1178250:intron | 55.0% |
| GCCCCATTAAAAGCCAGAGC+AGG | + | chr8_1:10929574-10929593 | None:intergenic | 55.0% | |
| CATGTTCCTTGCGTGGTGCA+AGG | - | chr8_1:10930041-10930060 | Msa1178250:intron | 55.0% | |
| !! | GGAGAAGGCATTGTGCATGG+AGG | + | chr8_1:10930112-10930131 | None:intergenic | 55.0% |
| GTCCATACAGAGCCCTGCTC+TGG | - | chr8_1:10929558-10929577 | Msa1178250:intron | 60.0% | |
| AGCCAGAGCAGGGCTCTGTA+TGG | + | chr8_1:10929563-10929582 | None:intergenic | 60.0% | |
| ATGGGGCTCCTACAAGTGGG+CGG | - | chr8_1:10929587-10929606 | Msa1178250:intron | 60.0% | |
| CAATCCCACCGCCCACTTGT+AGG | + | chr8_1:10929598-10929617 | None:intergenic | 60.0% | |
| CTACAAGTGGGCGGTGGGAT+TGG | - | chr8_1:10929596-10929615 | Msa1178250:intron | 60.0% | |
| !! | CGGCGTTGGCCGTCGATTGA+AGG | - | chr8_1:10925647-10925666 | Msa1178250:intron | 65.0% |
| ATCTCACGGTCGGTGAGGGG+TGG | - | chr8_1:10927127-10927146 | Msa1178250:intron | 65.0% | |
| TCTCACGGTCGGTGAGGGGT+GGG | - | chr8_1:10927128-10927147 | Msa1178250:intron | 65.0% | |
| GGCTCCTACAAGTGGGCGGT+GGG | - | chr8_1:10929591-10929610 | Msa1178250:intron | 65.0% | |
| !! | GGCGGTGGGATTGGTCCACT+CGG | - | chr8_1:10929605-10929624 | Msa1178250:intron | 65.0% |
| CTCACGGTCGGTGAGGGGTG+GGG | - | chr8_1:10927129-10927148 | Msa1178250:intron | 70.0% | |
| GGGCTCCTACAAGTGGGCGG+TGG | - | chr8_1:10929590-10929609 | Msa1178250:intron | 70.0% | |
| GGTCGGTGAGGGGTGGGGAC+TGG | - | chr8_1:10927134-10927153 | Msa1178250:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 10924164 | 10930222 | 10924164 | ID=Msa1178250;Name=Msa1178250 |
| chr8_1 | mRNA | 10924164 | 10930222 | 10924164 | ID=Msa1178250-mRNA-1;Parent=Msa1178250;Name=Msa1178250-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|0.8|0.83|6|0|496 |
| chr8_1 | exon | 10930091 | 10930222 | 10930091 | ID=Msa1178250-mRNA-1:exon:3840;Parent=Msa1178250-mRNA-1 |
| chr8_1 | exon | 10926377 | 10926921 | 10926377 | ID=Msa1178250-mRNA-1:exon:3839;Parent=Msa1178250-mRNA-1 |
| chr8_1 | exon | 10925721 | 10925913 | 10925721 | ID=Msa1178250-mRNA-1:exon:3838;Parent=Msa1178250-mRNA-1 |
| chr8_1 | exon | 10925561 | 10925625 | 10925561 | ID=Msa1178250-mRNA-1:exon:3837;Parent=Msa1178250-mRNA-1 |
| chr8_1 | exon | 10925215 | 10925425 | 10925215 | ID=Msa1178250-mRNA-1:exon:3836;Parent=Msa1178250-mRNA-1 |
| chr8_1 | exon | 10924164 | 10924508 | 10924164 | ID=Msa1178250-mRNA-1:exon:3835;Parent=Msa1178250-mRNA-1 |
| chr8_1 | CDS | 10930091 | 10930222 | 10930091 | ID=Msa1178250-mRNA-1:cds;Parent=Msa1178250-mRNA-1 |
| chr8_1 | CDS | 10926377 | 10926921 | 10926377 | ID=Msa1178250-mRNA-1:cds;Parent=Msa1178250-mRNA-1 |
| chr8_1 | CDS | 10925721 | 10925913 | 10925721 | ID=Msa1178250-mRNA-1:cds;Parent=Msa1178250-mRNA-1 |
| chr8_1 | CDS | 10925561 | 10925625 | 10925561 | ID=Msa1178250-mRNA-1:cds;Parent=Msa1178250-mRNA-1 |
| chr8_1 | CDS | 10925215 | 10925425 | 10925215 | ID=Msa1178250-mRNA-1:cds;Parent=Msa1178250-mRNA-1 |
| chr8_1 | CDS | 10924164 | 10924508 | 10924164 | ID=Msa1178250-mRNA-1:cds;Parent=Msa1178250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
