Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870510 | XP_003618525.2 | 98.630 | 73 | 1 | 0 | 1 | 73 | 1 | 73 | 1.38e-41 | 140 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870510 | G7KKX2 | 98.630 | 73 | 1 | 0 | 1 | 73 | 1 | 73 | 6.58e-42 | 140 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0870510 | 0.844593 | 6.868868e-59 | -8.615850e-47 |
| Msa0004480 | Msa0870510 | 0.810765 | 9.797763e-51 | -8.615850e-47 |
| Msa0009640 | Msa0870510 | 0.811508 | 6.761070e-51 | -8.615850e-47 |
| Msa0011840 | Msa0870510 | 0.801086 | 1.062684e-48 | -8.615850e-47 |
| Msa0030700 | Msa0870510 | 0.822763 | 1.990940e-53 | -8.615850e-47 |
| Msa0035020 | Msa0870510 | 0.806032 | 1.001487e-49 | -8.615850e-47 |
| Msa0051960 | Msa0870510 | 0.818743 | 1.671600e-52 | -8.615850e-47 |
| Msa0052780 | Msa0870510 | 0.831692 | 1.445302e-55 | -8.615850e-47 |
| Msa0060670 | Msa0870510 | 0.815843 | 7.511147e-52 | -8.615850e-47 |
| Msa0061220 | Msa0870510 | 0.860954 | 1.440217e-63 | -8.615850e-47 |
| Msa0077370 | Msa0870510 | 0.827914 | 1.202501e-54 | -8.615850e-47 |
| Msa0078120 | Msa0870510 | 0.823336 | 1.463401e-53 | -8.615850e-47 |
| Msa0078700 | Msa0870510 | 0.804933 | 1.702736e-49 | -8.615850e-47 |
| Msa0089730 | Msa0870510 | 0.802543 | 5.337180e-49 | -8.615850e-47 |
| Msa0090380 | Msa0870510 | 0.853939 | 1.714696e-61 | -8.615850e-47 |
| Msa0090510 | Msa0870510 | 0.806404 | 8.363459e-50 | -8.615850e-47 |
| Msa0094710 | Msa0870510 | 0.810828 | 9.494329e-51 | -8.615850e-47 |
| Msa0095940 | Msa0870510 | 0.835727 | 1.418265e-56 | -8.615850e-47 |
| Msa0097570 | Msa0870510 | 0.842323 | 2.773930e-58 | -8.615850e-47 |
| Msa0101960 | Msa0870510 | 0.832938 | 7.105282e-56 | -8.615850e-47 |
| Msa0105410 | Msa0870510 | 0.823033 | 1.722073e-53 | -8.615850e-47 |
| Msa0108760 | Msa0870510 | 0.811057 | 8.467445e-51 | -8.615850e-47 |
| Msa0113370 | Msa0870510 | -0.818210 | 2.207512e-52 | -8.615850e-47 |
| Msa0114790 | Msa0870510 | 0.805063 | 1.599305e-49 | -8.615850e-47 |
| Msa0117520 | Msa0870510 | 0.804121 | 2.514956e-49 | -8.615850e-47 |
| Msa0611060 | Msa0870510 | 0.815769 | 7.800506e-52 | -8.615850e-47 |
| Msa0613420 | Msa0870510 | 0.835867 | 1.306439e-56 | -8.615850e-47 |
| Msa0619310 | Msa0870510 | 0.808899 | 2.468820e-50 | -8.615850e-47 |
| Msa0629240 | Msa0870510 | 0.813648 | 2.301714e-51 | -8.615850e-47 |
| Msa0631130 | Msa0870510 | 0.825596 | 4.299961e-54 | -8.615850e-47 |
| Msa0631320 | Msa0870510 | 0.820655 | 6.115863e-53 | -8.615850e-47 |
| Msa0632420 | Msa0870510 | 0.828512 | 8.629470e-55 | -8.615850e-47 |
| Msa0635270 | Msa0870510 | 0.864670 | 1.028862e-64 | -8.615850e-47 |
| Msa0641130 | Msa0870510 | 0.870697 | 1.199782e-66 | -8.615850e-47 |
| Msa0646240 | Msa0870510 | 0.839344 | 1.675713e-57 | -8.615850e-47 |
| Msa0657930 | Msa0870510 | -0.801697 | 7.967236e-49 | -8.615850e-47 |
| Msa0658190 | Msa0870510 | 0.805553 | 1.262901e-49 | -8.615850e-47 |
| Msa0667030 | Msa0870510 | 0.826867 | 2.142585e-54 | -8.615850e-47 |
| Msa0669350 | Msa0870510 | 0.807541 | 4.806417e-50 | -8.615850e-47 |
| Msa0671210 | Msa0870510 | 0.803374 | 3.594421e-49 | -8.615850e-47 |
| Msa0679670 | Msa0870510 | 0.853483 | 2.319659e-61 | -8.615850e-47 |
| Msa0693750 | Msa0870510 | 0.822820 | 1.931036e-53 | -8.615850e-47 |
| Msa0703810 | Msa0870510 | 0.851409 | 9.043494e-61 | -8.615850e-47 |
| Msa0713060 | Msa0870510 | 0.820085 | 8.261816e-53 | -8.615850e-47 |
| Msa0743870 | Msa0870510 | 0.805847 | 1.095477e-49 | -8.615850e-47 |
| Msa0744640 | Msa0870510 | 0.915542 | 5.199442e-85 | -8.615850e-47 |
| Msa0772280 | Msa0870510 | 0.823046 | 1.709697e-53 | -8.615850e-47 |
| Msa0775160 | Msa0870510 | 0.815772 | 7.789622e-52 | -8.615850e-47 |
| Msa0778570 | Msa0870510 | 0.802145 | 6.446590e-49 | -8.615850e-47 |
| Msa0787790 | Msa0870510 | 0.833226 | 6.023896e-56 | -8.615850e-47 |
| Msa0796580 | Msa0870510 | -0.809552 | 1.788675e-50 | -8.615850e-47 |
| Msa0810440 | Msa0870510 | 0.816904 | 4.348628e-52 | -8.615850e-47 |
| Msa0812530 | Msa0870510 | 0.832178 | 1.096396e-55 | -8.615850e-47 |
| Msa0824930 | Msa0870510 | 0.805766 | 1.139130e-49 | -8.615850e-47 |
| Msa0830030 | Msa0870510 | 0.805451 | 1.326327e-49 | -8.615850e-47 |
| Msa0833270 | Msa0870510 | 0.847945 | 8.386808e-60 | -8.615850e-47 |
| Msa0841730 | Msa0870510 | 0.914194 | 2.551993e-84 | -8.615850e-47 |
| Msa0137860 | Msa0870510 | 0.840979 | 6.274623e-58 | -8.615850e-47 |
| Msa0138900 | Msa0870510 | 0.840051 | 1.097521e-57 | -8.615850e-47 |
| Msa0139680 | Msa0870510 | 0.802179 | 6.344295e-49 | -8.615850e-47 |
| Msa0148320 | Msa0870510 | 0.805556 | 1.261177e-49 | -8.615850e-47 |
| Msa0160960 | Msa0870510 | 0.813075 | 3.074807e-51 | -8.615850e-47 |
| Msa0176260 | Msa0870510 | 0.809205 | 2.123356e-50 | -8.615850e-47 |
| Msa0183910 | Msa0870510 | 0.801928 | 7.143551e-49 | -8.615850e-47 |
| Msa0194920 | Msa0870510 | 0.814570 | 1.440071e-51 | -8.615850e-47 |
| Msa0204140 | Msa0870510 | 0.816167 | 6.356868e-52 | -8.615850e-47 |
| Msa0206450 | Msa0870510 | 0.825355 | 4.904502e-54 | -8.615850e-47 |
| Msa0210610 | Msa0870510 | 0.810314 | 1.226004e-50 | -8.615850e-47 |
| Msa0217060 | Msa0870510 | 0.818756 | 1.659956e-52 | -8.615850e-47 |
| Msa0220400 | Msa0870510 | -0.805158 | 1.527656e-49 | -8.615850e-47 |
| Msa0224130 | Msa0870510 | 0.802040 | 6.776043e-49 | -8.615850e-47 |
| Msa0226260 | Msa0870510 | 0.807751 | 4.337333e-50 | -8.615850e-47 |
| Msa0233970 | Msa0870510 | 0.813193 | 2.896539e-51 | -8.615850e-47 |
| Msa0236920 | Msa0870510 | 0.819977 | 8.745933e-53 | -8.615850e-47 |
| Msa0370580 | Msa0870510 | -0.825529 | 4.461216e-54 | -8.615850e-47 |
| Msa0374890 | Msa0870510 | 0.805398 | 1.360814e-49 | -8.615850e-47 |
| Msa0388360 | Msa0870510 | 0.802528 | 5.375881e-49 | -8.615850e-47 |
| Msa0388730 | Msa0870510 | 0.822671 | 2.090788e-53 | -8.615850e-47 |
| Msa0389210 | Msa0870510 | 0.805837 | 1.100824e-49 | -8.615850e-47 |
| Msa0403470 | Msa0870510 | -0.803129 | 4.039216e-49 | -8.615850e-47 |
| Msa0441260 | Msa0870510 | 0.801332 | 9.465433e-49 | -8.615850e-47 |
| Msa0470880 | Msa0870510 | 0.820507 | 6.615130e-53 | -8.615850e-47 |
| Msa0254470 | Msa0870510 | 0.804052 | 2.599222e-49 | -8.615850e-47 |
| Msa0256920 | Msa0870510 | 0.819305 | 1.245677e-52 | -8.615850e-47 |
| Msa0264520 | Msa0870510 | 0.813728 | 2.209438e-51 | -8.615850e-47 |
| Msa0264680 | Msa0870510 | 0.809332 | 1.994086e-50 | -8.615850e-47 |
| Msa0265270 | Msa0870510 | 0.800888 | 1.166683e-48 | -8.615850e-47 |
| Msa0268210 | Msa0870510 | -0.805071 | 1.593560e-49 | -8.615850e-47 |
| Msa0268450 | Msa0870510 | -0.800890 | 1.165629e-48 | -8.615850e-47 |
| Msa0268670 | Msa0870510 | -0.804682 | 1.921689e-49 | -8.615850e-47 |
| Msa0272400 | Msa0870510 | 0.811445 | 6.976135e-51 | -8.615850e-47 |
| Msa0276430 | Msa0870510 | 0.812704 | 3.708960e-51 | -8.615850e-47 |
| Msa0279660 | Msa0870510 | 0.802180 | 6.340923e-49 | -8.615850e-47 |
| Msa0282960 | Msa0870510 | 0.815758 | 7.844091e-52 | -8.615850e-47 |
| Msa0293720 | Msa0870510 | 0.829614 | 4.664852e-55 | -8.615850e-47 |
| Msa0302730 | Msa0870510 | 0.820611 | 6.260254e-53 | -8.615850e-47 |
| Msa0304730 | Msa0870510 | 0.821772 | 3.380174e-53 | -8.615850e-47 |
| Msa0312590 | Msa0870510 | 0.800754 | 1.242381e-48 | -8.615850e-47 |
| Msa0316470 | Msa0870510 | 0.806460 | 8.139886e-50 | -8.615850e-47 |
| Msa0319020 | Msa0870510 | 0.800487 | 1.408161e-48 | -8.615850e-47 |
| Msa0332190 | Msa0870510 | 0.808320 | 3.281359e-50 | -8.615850e-47 |
| Msa0345050 | Msa0870510 | 0.811816 | 5.794639e-51 | -8.615850e-47 |
| Msa0345890 | Msa0870510 | 0.810046 | 1.400095e-50 | -8.615850e-47 |
| Msa0345900 | Msa0870510 | 0.811545 | 6.635010e-51 | -8.615850e-47 |
| Msa0355550 | Msa0870510 | 0.837977 | 3.778902e-57 | -8.615850e-47 |
| Msa0484800 | Msa0870510 | 0.825543 | 4.425503e-54 | -8.615850e-47 |
| Msa0490320 | Msa0870510 | 0.836956 | 6.903348e-57 | -8.615850e-47 |
| Msa0497120 | Msa0870510 | 0.810006 | 1.428058e-50 | -8.615850e-47 |
| Msa0500610 | Msa0870510 | -0.811561 | 6.583811e-51 | -8.615850e-47 |
| Msa0517270 | Msa0870510 | 0.818568 | 1.831800e-52 | -8.615850e-47 |
| Msa0522630 | Msa0870510 | 0.802174 | 6.359575e-49 | -8.615850e-47 |
| Msa0528990 | Msa0870510 | 0.804610 | 1.988576e-49 | -8.615850e-47 |
| Msa0529000 | Msa0870510 | 0.820646 | 6.144351e-53 | -8.615850e-47 |
| Msa0529110 | Msa0870510 | 0.804936 | 1.700644e-49 | -8.615850e-47 |
| Msa0532230 | Msa0870510 | 0.826934 | 2.066091e-54 | -8.615850e-47 |
| Msa0534610 | Msa0870510 | 0.831125 | 1.992503e-55 | -8.615850e-47 |
| Msa0534870 | Msa0870510 | 0.824844 | 6.474906e-54 | -8.615850e-47 |
| Msa0535400 | Msa0870510 | 0.806982 | 6.313121e-50 | -8.615850e-47 |
| Msa0536350 | Msa0870510 | 0.824340 | 8.513585e-54 | -8.615850e-47 |
| Msa0545050 | Msa0870510 | 0.876722 | 1.113544e-68 | -8.615850e-47 |
| Msa0558650 | Msa0870510 | 0.800998 | 1.107904e-48 | -8.615850e-47 |
| Msa0563860 | Msa0870510 | 0.833670 | 4.667759e-56 | -8.615850e-47 |
| Msa0567370 | Msa0870510 | 0.850192 | 1.990938e-60 | -8.615850e-47 |
| Msa0567430 | Msa0870510 | 0.808150 | 3.566781e-50 | -8.615850e-47 |
| Msa0567480 | Msa0870510 | 0.810550 | 1.090090e-50 | -8.615850e-47 |
| Msa0567520 | Msa0870510 | 0.805865 | 1.086098e-49 | -8.615850e-47 |
| Msa0574930 | Msa0870510 | 0.848966 | 4.375703e-60 | -8.615850e-47 |
| Msa0577490 | Msa0870510 | 0.838805 | 2.311232e-57 | -8.615850e-47 |
| Msa0584580 | Msa0870510 | 0.821260 | 4.438596e-53 | -8.615850e-47 |
| Msa0584600 | Msa0870510 | 0.823463 | 1.366428e-53 | -8.615850e-47 |
| Msa0590810 | Msa0870510 | 0.833946 | 3.980576e-56 | -8.615850e-47 |
| Msa0592330 | Msa0870510 | 0.858436 | 8.247632e-63 | -8.615850e-47 |
| Msa0595270 | Msa0870510 | 0.800669 | 1.293184e-48 | -8.615850e-47 |
| Msa0600590 | Msa0870510 | 0.880538 | 5.053973e-70 | -8.615850e-47 |
| Msa0852790 | Msa0870510 | 0.823147 | 1.619932e-53 | -8.615850e-47 |
| Msa0863990 | Msa0870510 | 0.872668 | 2.663965e-67 | -8.615850e-47 |
| Msa0864820 | Msa0870510 | -0.811959 | 5.392813e-51 | -8.615850e-47 |
| Msa0870510 | Msa0879930 | 0.817585 | 3.055008e-52 | -8.615850e-47 |
| Msa0870510 | Msa0901270 | 0.816655 | 4.945481e-52 | -8.615850e-47 |
| Msa0870510 | Msa0901290 | 0.813315 | 2.724152e-51 | -8.615850e-47 |
| Msa0870510 | Msa0905570 | 0.943302 | 1.536980e-102 | -8.615850e-47 |
| Msa0870510 | Msa0930270 | 0.817605 | 3.024583e-52 | -8.615850e-47 |
| Msa0870510 | Msa0930740 | 0.854765 | 9.900229e-62 | -8.615850e-47 |
| Msa0870510 | Msa0944020 | 0.823266 | 1.519349e-53 | -8.615850e-47 |
| Msa0870510 | Msa0945130 | 0.854364 | 1.292736e-61 | -8.615850e-47 |
| Msa0870510 | Msa0946110 | 0.811904 | 5.544658e-51 | -8.615850e-47 |
| Msa0870510 | Msa0946330 | 0.804974 | 1.669612e-49 | -8.615850e-47 |
| Msa0870510 | Msa0966580 | 0.817048 | 4.035621e-52 | -8.615850e-47 |
| Msa0870510 | Msa0974710 | 0.869264 | 3.528256e-66 | -8.615850e-47 |
| Msa0870510 | Msa0982090 | -0.816075 | 6.667345e-52 | -8.615850e-47 |
| Msa0870510 | Msa1001120 | 0.811792 | 5.863395e-51 | -8.615850e-47 |
| Msa0870510 | Msa1011250 | 0.811521 | 6.714628e-51 | -8.615850e-47 |
| Msa0870510 | Msa1012800 | 0.800438 | 1.441206e-48 | -8.615850e-47 |
| Msa0870510 | Msa1016960 | 0.832080 | 1.159047e-55 | -8.615850e-47 |
| Msa0870510 | Msa1030810 | 0.826161 | 3.157723e-54 | -8.615850e-47 |
| Msa0870510 | Msa1032480 | 0.811222 | 7.800632e-51 | -8.615850e-47 |
| Msa0870510 | Msa1034450 | 0.842719 | 2.178118e-58 | -8.615850e-47 |
| Msa0870510 | Msa1058200 | 0.822068 | 2.886443e-53 | -8.615850e-47 |
| Msa0870510 | Msa1062040 | 0.845224 | 4.640300e-59 | -8.615850e-47 |
| Msa0870510 | Msa1069340 | 0.823912 | 1.072972e-53 | -8.615850e-47 |
| Msa0870510 | Msa1069890 | 0.855641 | 5.504305e-62 | -8.615850e-47 |
| Msa0870510 | Msa1074200 | 0.838762 | 2.371396e-57 | -8.615850e-47 |
| Msa0870510 | Msa1080140 | 0.807233 | 5.585670e-50 | -8.615850e-47 |
| Msa0870510 | Msa1086490 | -0.842453 | 2.562103e-58 | -8.615850e-47 |
| Msa0870510 | Msa1086670 | -0.811490 | 6.822835e-51 | -8.615850e-47 |
| Msa0870510 | Msa1101240 | 0.800876 | 1.172971e-48 | -8.615850e-47 |
| Msa0870510 | Msa1107200 | 0.832002 | 1.211581e-55 | -8.615850e-47 |
| Msa0870510 | Msa1114670 | 0.822527 | 2.258074e-53 | -8.615850e-47 |
| Msa0870510 | Msa1119920 | 0.841786 | 3.846909e-58 | -8.615850e-47 |
| Msa0870510 | Msa1128270 | 0.812974 | 3.236566e-51 | -8.615850e-47 |
| Msa0870510 | Msa1131430 | 0.813426 | 2.574545e-51 | -8.615850e-47 |
| Msa0870510 | Msa1131790 | 0.810991 | 8.750531e-51 | -8.615850e-47 |
| Msa0870510 | Msa1133700 | 0.833276 | 5.852815e-56 | -8.615850e-47 |
| Msa0870510 | Msa1147640 | 0.803622 | 3.192177e-49 | -8.615850e-47 |
| Msa0870510 | Msa1150280 | 0.800360 | 1.494683e-48 | -8.615850e-47 |
| Msa0870510 | Msa1150780 | 0.842226 | 2.943098e-58 | -8.615850e-47 |
| Msa0870510 | Msa1157670 | 0.865618 | 5.183025e-65 | -8.615850e-47 |
| Msa0870510 | Msa1159170 | 0.851093 | 1.110953e-60 | -8.615850e-47 |
| Msa0870510 | Msa1167310 | 0.843106 | 1.717748e-58 | -8.615850e-47 |
| Msa0870510 | Msa1173150 | 0.839486 | 1.539874e-57 | -8.615850e-47 |
| Msa0870510 | Msa1175100 | 0.802373 | 5.785883e-49 | -8.615850e-47 |
| Msa0870510 | Msa1178250 | 0.813418 | 2.585077e-51 | -8.615850e-47 |
| Msa0870510 | Msa1180720 | 0.810938 | 8.986242e-51 | -8.615850e-47 |
| Msa0870510 | Msa1183140 | 0.802219 | 6.224602e-49 | -8.615850e-47 |
| Msa0870510 | Msa1184690 | 0.843194 | 1.627947e-58 | -8.615850e-47 |
| Msa0870510 | Msa1187480 | 0.800772 | 1.232236e-48 | -8.615850e-47 |
| Msa0870510 | Msa1187490 | 0.826668 | 2.390607e-54 | -8.615850e-47 |
| Msa0870510 | Msa1191440 | 0.828667 | 7.916483e-55 | -8.615850e-47 |
| Msa0870510 | Msa1202110 | 0.803758 | 2.991691e-49 | -8.615850e-47 |
| Msa0870510 | Msa1202800 | 0.853164 | 2.863764e-61 | -8.615850e-47 |
| Msa0870510 | Msa1203810 | 0.807360 | 5.251288e-50 | -8.615850e-47 |
| Msa0870510 | Msa1208990 | 0.816418 | 5.586055e-52 | -8.615850e-47 |
| Msa0870510 | Msa1212050 | 0.817586 | 3.053993e-52 | -8.615850e-47 |
| Msa0870510 | Msa1218160 | 0.843597 | 1.270793e-58 | -8.615850e-47 |
| Msa0870510 | Msa1225580 | 0.816270 | 6.029943e-52 | -8.615850e-47 |
| Msa0870510 | Msa1231710 | 0.817320 | 3.505238e-52 | -8.615850e-47 |
| Msa0870510 | Msa1237890 | 0.804221 | 2.397416e-49 | -8.615850e-47 |
| Msa0870510 | Msa1238190 | 0.803992 | 2.675363e-49 | -8.615850e-47 |
| Msa0870510 | Msa1238600 | 0.899327 | 2.212252e-77 | -8.615850e-47 |
| Msa0870510 | Msa1238660 | 0.831051 | 2.077536e-55 | -8.615850e-47 |
| Msa0870510 | Msa1252810 | 0.822429 | 2.379949e-53 | -8.615850e-47 |
| Msa0870510 | Msa1255210 | 0.865797 | 4.549474e-65 | -8.615850e-47 |
| Msa0870510 | Msa1256060 | 0.851777 | 7.115973e-61 | -8.615850e-47 |
| Msa0870510 | Msa1259860 | 0.824042 | 9.997518e-54 | -8.615850e-47 |
| Msa0870510 | Msa1270050 | 0.828347 | 9.455785e-55 | -8.615850e-47 |
| Msa0870510 | Msa1286210 | 0.802652 | 5.069321e-49 | -8.615850e-47 |
| Msa0870510 | Msa1289050 | 0.851692 | 7.521520e-61 | -8.615850e-47 |
| Msa0870510 | Msa1289090 | 0.856452 | 3.187568e-62 | -8.615850e-47 |
| Msa0870510 | Msa1295650 | 0.861132 | 1.272083e-63 | -8.615850e-47 |
| Msa0870510 | Msa1296240 | 0.852269 | 5.158463e-61 | -8.615850e-47 |
| Msa0870510 | Msa1306830 | 0.833740 | 4.483572e-56 | -8.615850e-47 |
| Msa0870510 | Msa1309760 | 0.801559 | 8.502754e-49 | -8.615850e-47 |
| Msa0870510 | Msa1312440 | 0.823787 | 1.147422e-53 | -8.615850e-47 |
| Msa0870510 | Msa1315480 | 0.818548 | 1.850773e-52 | -8.615850e-47 |
| Msa0870510 | Msa1318550 | 0.800298 | 1.538793e-48 | -8.615850e-47 |
| Msa0870510 | Msa1319560 | 0.842148 | 3.086072e-58 | -8.615850e-47 |
| Msa0870510 | Msa1323010 | 0.807715 | 4.415604e-50 | -8.615850e-47 |
| Msa0870510 | Msa1330920 | 0.801255 | 9.816799e-49 | -8.615850e-47 |
| Msa0870510 | Msa1355510 | 0.809048 | 2.294106e-50 | -8.615850e-47 |
| Msa0870510 | Msa1362850 | 0.812822 | 3.493618e-51 | -8.615850e-47 |
| Msa0870510 | Msa1364350 | -0.805779 | 1.132337e-49 | -8.615850e-47 |
| Msa0870510 | Msa1367790 | 0.834045 | 3.759714e-56 | -8.615850e-47 |
| Msa0870510 | Msa1369920 | -0.823020 | 1.734098e-53 | -8.615850e-47 |
| Msa0870510 | Msa1379020 | 0.808713 | 2.705799e-50 | -8.615850e-47 |
| Msa0870510 | Msa1380220 | 0.806952 | 6.407441e-50 | -8.615850e-47 |
| Msa0870510 | Msa1382380 | -0.816818 | 4.545456e-52 | -8.615850e-47 |
| Msa0870510 | Msa1386000 | 0.814282 | 1.667858e-51 | -8.615850e-47 |
| Msa0870510 | Msa1386890 | 0.802644 | 5.086257e-49 | -8.615850e-47 |
| Msa0870510 | Msa1389170 | 0.835598 | 1.529052e-56 | -8.615850e-47 |
| Msa0870510 | Msa1395110 | 0.818933 | 1.513438e-52 | -8.615850e-47 |
| Msa0870510 | Msa1397390 | 0.800958 | 1.129024e-48 | -8.615850e-47 |
| Msa0870510 | Msa1404050 | 0.840071 | 1.084133e-57 | -8.615850e-47 |
| Msa0870510 | Msa1407760 | 0.851219 | 1.023552e-60 | -8.615850e-47 |
| Msa0870510 | Msa1407880 | 0.824152 | 9.425317e-54 | -8.615850e-47 |
| Msa0870510 | Msa1410550 | 0.815031 | 1.138334e-51 | -8.615850e-47 |
| Msa0870510 | Msa1415410 | 0.823009 | 1.744757e-53 | -8.615850e-47 |
| Msa0870510 | Msa1419840 | 0.815411 | 9.371442e-52 | -8.615850e-47 |
| Msa0870510 | Msa1433410 | 0.852783 | 3.681026e-61 | -8.615850e-47 |
| Msa0870510 | Msa1437730 | 0.829379 | 5.319918e-55 | -8.615850e-47 |
| Msa0870510 | Msa1442920 | 0.831121 | 1.997741e-55 | -8.615850e-47 |
| Msa0870510 | Msa1443620 | 0.862445 | 5.043405e-64 | -8.615850e-47 |
| Msa0870510 | Msa1443640 | 0.805551 | 1.263815e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870510 | MtrunA17_Chr6g0453441 | 98.630 | 73 | 1 | 0 | 1 | 73 | 1 | 73 | 1.27e-45 | 140 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0870510 | AT3G29034.1 | 46.575 | 73 | 38 | 1 | 2 | 73 | 14 | 86 | 2.54e-15 | 64.3 |
Find 12 sgRNAs with CRISPR-Local
Find 15 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACTTCTGATTGGATTAAT+TGG | 0.161988 | 6_1:-4953163 | Msa0870510:CDS |
| GGTCTCCTTGTTCTCATGTT+GGG | 0.333045 | 6_1:-4953076 | Msa0870510:CDS |
| GGTTTGTGAGTAAGCAAATA+AGG | 0.351967 | 6_1:+4953129 | None:intergenic |
| AACACAAAAGCACTTCTGAT+TGG | 0.397640 | 6_1:-4953172 | Msa0870510:CDS |
| CTCATGTTGGGATTGCTTGT+AGG | 0.435942 | 6_1:-4953064 | Msa0870510:CDS |
| TGGTCTCCTTGTTCTCATGT+TGG | 0.439787 | 6_1:-4953077 | Msa0870510:CDS |
| GCTTTGACTTGGTGATATGA+AGG | 0.513847 | 6_1:+4953108 | None:intergenic |
| CCAAGTCAAAGCATCACAAT+TGG | 0.514348 | 6_1:-4953097 | Msa0870510:CDS |
| CCAATTGTGATGCTTTGACT+TGG | 0.515642 | 6_1:+4953097 | None:intergenic |
| TTGGGATTGCTTGTAGGAGA+AGG | 0.548891 | 6_1:-4953058 | Msa0870510:CDS |
| GCAATCCCAACATGAGAACA+AGG | 0.621689 | 6_1:+4953071 | None:intergenic |
| AAAACAAGGATGAATTACAA+AGG | 0.662210 | 6_1:+4953028 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTTCTCTTCCTTCTTTTT+TGG | + | chr6_1:4953078-4953097 | None:intergenic | 30.0% |
| AATCCCTCATCCAAAAAAGA+AGG | - | chr6_1:4953065-4953084 | Msa0870510:CDS | 35.0% | |
| !!! | CTTCCTTCTTTTTTGGATGA+GGG | + | chr6_1:4953071-4953090 | None:intergenic | 35.0% |
| !!! | TCTTCCTTCTTTTTTGGATG+AGG | + | chr6_1:4953072-4953091 | None:intergenic | 35.0% |
| !! | AACACAAAAGCACTTCTGAT+TGG | - | chr6_1:4953111-4953130 | Msa0870510:CDS | 35.0% |
| GCACTTCTGATTGGATTAAT+TGG | - | chr6_1:4953120-4953139 | Msa0870510:CDS | 35.0% | |
| GGTTTGTGAGTAAGCAAATA+AGG | + | chr6_1:4953157-4953176 | None:intergenic | 35.0% | |
| !! | GCTTTGACTTGGTGATATGA+AGG | + | chr6_1:4953178-4953197 | None:intergenic | 40.0% |
| CCAATTGTGATGCTTTGACT+TGG | + | chr6_1:4953189-4953208 | None:intergenic | 40.0% | |
| ! | CCAAGTCAAAGCATCACAAT+TGG | - | chr6_1:4953186-4953205 | Msa0870510:CDS | 40.0% |
| TGGTCTCCTTGTTCTCATGT+TGG | - | chr6_1:4953206-4953225 | Msa0870510:CDS | 45.0% | |
| GGTCTCCTTGTTCTCATGTT+GGG | - | chr6_1:4953207-4953226 | Msa0870510:CDS | 45.0% | |
| GCAATCCCAACATGAGAACA+AGG | + | chr6_1:4953215-4953234 | None:intergenic | 45.0% | |
| CTCATGTTGGGATTGCTTGT+AGG | - | chr6_1:4953219-4953238 | Msa0870510:CDS | 45.0% | |
| TTGGGATTGCTTGTAGGAGA+AGG | - | chr6_1:4953225-4953244 | Msa0870510:CDS | 45.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 4953042 | 4953263 | 4953042 | ID=Msa0870510;Name=Msa0870510 |
| chr6_1 | mRNA | 4953042 | 4953263 | 4953042 | ID=Msa0870510-mRNA-1;Parent=Msa0870510;Name=Msa0870510-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|-1|0|1|-1|1|1|0|73 |
| chr6_1 | exon | 4953042 | 4953263 | 4953042 | ID=Msa0870510-mRNA-1:exon:1574;Parent=Msa0870510-mRNA-1 |
| chr6_1 | CDS | 4953042 | 4953263 | 4953042 | ID=Msa0870510-mRNA-1:cds;Parent=Msa0870510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
