Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1180660 | XP_003627048.1 | 98.580 | 493 | 7 | 0 | 1 | 493 | 1 | 493 | 0.0 | 998 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1180660 | sp|Q9SEK2|HXK1_TOBAC | 72.874 | 494 | 133 | 1 | 1 | 493 | 1 | 494 | 0.0 | 766 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0687870 | Msa1180660 | 0.802128 | 6.498168e-49 | -8.615850e-47 |
| Msa0705000 | Msa1180660 | 0.807303 | 5.398618e-50 | -8.615850e-47 |
| Msa0705040 | Msa1180660 | 0.804347 | 2.256390e-49 | -8.615850e-47 |
| Msa1180660 | Msa1312510 | 0.984313 | 3.374632e-160 | -8.615850e-47 |
| Msa1180660 | Msa1401390 | 0.830300 | 3.174089e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1180660 | MtrunA17_Chr8g0340741 | 98.580 | 493 | 7 | 0 | 1 | 493 | 1 | 493 | 0.0 | 998 |
| Msa1180660 | MtrunA17_Chr8g0389821 | 74.310 | 471 | 119 | 2 | 25 | 494 | 26 | 495 | 0.0 | 735 |
| Msa1180660 | MtrunA17_Chr6g0487071 | 70.043 | 464 | 138 | 1 | 32 | 494 | 30 | 493 | 0.0 | 679 |
| Msa1180660 | MtrunA17_Chr1g0156571 | 57.837 | 453 | 188 | 3 | 40 | 491 | 42 | 492 | 0.0 | 522 |
| Msa1180660 | MtrunA17_Chr5g0396421 | 56.263 | 471 | 193 | 5 | 29 | 489 | 29 | 496 | 3.52e-173 | 496 |
| Msa1180660 | MtrunA17_Chr4g0054541 | 58.861 | 158 | 63 | 1 | 227 | 384 | 5 | 160 | 1.83e-57 | 188 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1180660 | AT2G19860.1 | 71.717 | 495 | 139 | 1 | 1 | 494 | 1 | 495 | 0.0 | 728 |
| Msa1180660 | AT4G29130.1 | 73.077 | 494 | 132 | 1 | 1 | 493 | 1 | 494 | 0.0 | 728 |
| Msa1180660 | AT2G19860.2 | 73.316 | 386 | 102 | 1 | 110 | 494 | 1 | 386 | 0.0 | 586 |
| Msa1180660 | AT1G47840.1 | 53.524 | 454 | 206 | 5 | 40 | 491 | 43 | 493 | 3.06e-163 | 471 |
| Msa1180660 | AT1G50460.1 | 52.008 | 473 | 213 | 6 | 26 | 487 | 26 | 495 | 1.39e-162 | 470 |
| Msa1180660 | AT3G20040.1 | 49.190 | 494 | 242 | 4 | 1 | 487 | 1 | 492 | 1.16e-153 | 447 |
| Msa1180660 | AT1G50460.3 | 50.493 | 406 | 187 | 6 | 93 | 487 | 17 | 419 | 1.72e-128 | 380 |
| Msa1180660 | AT4G37840.1 | 44.770 | 478 | 234 | 8 | 22 | 486 | 22 | 482 | 7.11e-124 | 371 |
| Msa1180660 | AT1G50460.2 | 54.985 | 331 | 146 | 3 | 26 | 355 | 26 | 354 | 8.53e-122 | 361 |
| Msa1180660 | AT1G47840.2 | 58.176 | 318 | 129 | 4 | 40 | 355 | 43 | 358 | 2.16e-119 | 355 |
| Msa1180660 | AT1G47845.1 | 46.575 | 146 | 75 | 3 | 278 | 422 | 40 | 183 | 9.05e-34 | 126 |
Find 133 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCAAATCACCATGCCATTT+TGG | 0.192144 | 8_1:-14869923 | None:intergenic |
| AACTGAAGGATAGATGATTT+TGG | 0.210035 | 8_1:-14867408 | None:intergenic |
| TGAAAGTTCCATTCATATTA+AGG | 0.249236 | 8_1:+14870341 | Msa1180660:CDS |
| TAGACTGCTGGGGTCAAAAT+TGG | 0.268648 | 8_1:-14871670 | None:intergenic |
| GAATAGTCATACTCAGTTAA+TGG | 0.280021 | 8_1:-14870091 | None:intergenic |
| AAGCAAACATCCATTTCTTC+TGG | 0.328497 | 8_1:+14869452 | Msa1180660:CDS |
| GAAATGGATGTTTGCTTGAC+AGG | 0.331885 | 8_1:-14869446 | None:intergenic |
| CTAATTTCTACATTGCTGTT+AGG | 0.337570 | 8_1:+14871789 | Msa1180660:three_prime_UTR |
| GTCAATCTTTCCTAGACTGC+TGG | 0.345017 | 8_1:-14871682 | None:intergenic |
| TTAGCAATTATCATGTTATT+CGG | 0.345905 | 8_1:+14871613 | Msa1180660:exon |
| CTCTAAAATCTCCTTCAGTT+TGG | 0.351523 | 8_1:-14871097 | None:intergenic |
| TGAAGAAAGTGAAGATTTCA+AGG | 0.377653 | 8_1:+14869379 | Msa1180660:CDS |
| GATGTCCCGACCATCAAATT+TGG | 0.377775 | 8_1:-14869176 | None:intergenic |
| TTCGTTGATAATCTTCCTAC+AGG | 0.388159 | 8_1:+14867815 | Msa1180660:CDS |
| TTCCTCCAAATTTGATGGTC+GGG | 0.401839 | 8_1:+14869171 | Msa1180660:CDS |
| CGCAATTGTACCTGTTCACC+AGG | 0.404155 | 8_1:-14870136 | None:intergenic |
| GTGCTCAAGCAATACCAAAA+TGG | 0.408539 | 8_1:+14869909 | Msa1180660:CDS |
| CTTCTGGGAACCTTATCAAC+TGG | 0.409863 | 8_1:+14869468 | Msa1180660:CDS |
| GTCGTTTACATAGGTTGGTC+AGG | 0.410193 | 8_1:+14869599 | Msa1180660:intron |
| GATACAGTCGGGACATTAGC+TGG | 0.411737 | 8_1:+14869812 | Msa1180660:CDS |
| GAGTTTAAACCCTGGTGAAC+AGG | 0.414005 | 8_1:+14870126 | Msa1180660:CDS |
| TCGTAGAGTACTATACAAAA+TGG | 0.414429 | 8_1:+14870276 | Msa1180660:CDS |
| CATGGTGATTTGCCCAAGTC+TGG | 0.418240 | 8_1:+14869932 | Msa1180660:CDS |
| GATAATATCTGGAATGTACT+TGG | 0.418293 | 8_1:+14870243 | Msa1180660:CDS |
| ACATGGAGTGGGGAAACTTC+CGG | 0.420382 | 8_1:+14870056 | Msa1180660:CDS |
| CACGTACGCTGCATTTGTTC+CGG | 0.422595 | 8_1:-14869882 | None:intergenic |
| TGATATGAACATAACAGCTT+TGG | 0.423547 | 8_1:+14869665 | Msa1180660:CDS |
| TCAAACGATGGTTCAGGAAC+TGG | 0.426928 | 8_1:+14871548 | Msa1180660:CDS |
| GACATGCACACATATACTTT+AGG | 0.427494 | 8_1:+14871702 | Msa1180660:three_prime_UTR |
| AATTTGTACCTTAATATGAA+TGG | 0.430233 | 8_1:-14870349 | None:intergenic |
| GTCAATTCCTCCAAATTTGA+TGG | 0.432250 | 8_1:+14869166 | Msa1180660:CDS |
| GATAAGGTTCCCAGAAGAAA+TGG | 0.432980 | 8_1:-14869462 | None:intergenic |
| AACCTTATCAACTGGACAAA+AGG | 0.439588 | 8_1:+14869476 | Msa1180660:CDS |
| TCAATCTTTCCTAGACTGCT+GGG | 0.445171 | 8_1:-14871681 | None:intergenic |
| CACGCTGGTCTTGCTTCTGA+TGG | 0.450067 | 8_1:+14867764 | Msa1180660:CDS |
| AGCGATATTGAAGGAATTTG+AGG | 0.455513 | 8_1:+14867679 | Msa1180660:CDS |
| TAGTACATTGCAGAATTCTC+AGG | 0.457342 | 8_1:-14871769 | None:intergenic |
| ACTCACCATTTCTCCAGACT+TGG | 0.457826 | 8_1:-14869945 | None:intergenic |
| ACCAACGTTGAAGCTGAAAC+AGG | 0.462199 | 8_1:+14867715 | Msa1180660:CDS |
| CGTGGGAATTCTGAAGAAGT+TGG | 0.463666 | 8_1:+14871370 | Msa1180660:CDS |
| AGCAAACATCCATTTCTTCT+GGG | 0.478280 | 8_1:+14869453 | Msa1180660:CDS |
| GTGGCGTGTGCGACGGTGAT+CGG | 0.481181 | 8_1:+14867578 | Msa1180660:CDS |
| GGTGCTCGTCTTTCTGCAGC+TGG | 0.483516 | 8_1:+14871344 | Msa1180660:CDS |
| ACAAAATGGCTGAAGAAGCT+TGG | 0.486720 | 8_1:+14870290 | Msa1180660:CDS |
| GTGGGAATTCTGAAGAAGTT+GGG | 0.490235 | 8_1:+14871371 | Msa1180660:CDS |
| ATCGTTGAGCACTCAAACGA+TGG | 0.493326 | 8_1:+14871536 | Msa1180660:CDS |
| CCTAGCTCCCTCTTTCTACC+TGG | 0.503608 | 8_1:-14869407 | None:intergenic |
| GAGCACTCAAACGATGGTTC+AGG | 0.504238 | 8_1:+14871542 | Msa1180660:CDS |
| CCAGGTAGAAAGAGGGAGCT+AGG | 0.506646 | 8_1:+14869407 | Msa1180660:CDS |
| TTGCTTGACAGGAAAGGAAA+AGG | 0.507613 | 8_1:-14869435 | None:intergenic |
| CTCATATAGTCCACCATCCA+TGG | 0.513083 | 8_1:-14871438 | None:intergenic |
| CGGAACAAATGCAGCGTACG+TGG | 0.515444 | 8_1:+14869883 | Msa1180660:CDS |
| TTTGCCCAAGTCTGGAGAAA+TGG | 0.519733 | 8_1:+14869940 | Msa1180660:CDS |
| TACCTCGCTGGAAGTGAGAA+AGG | 0.524646 | 8_1:+14871286 | Msa1180660:CDS |
| AGCTACGGCGGCGTGTGTGG+TGG | 0.531377 | 8_1:+14867601 | Msa1180660:CDS |
| ATGATAATTGCTAAACATCA+AGG | 0.533118 | 8_1:-14871604 | None:intergenic |
| TGACATCCTTGTTTGTATGT+CGG | 0.537032 | 8_1:-14869838 | None:intergenic |
| AAAAGCAATAGCGATATTGA+AGG | 0.541074 | 8_1:+14867670 | Msa1180660:CDS |
| CTTTCTGCAGCTGGTATCGT+GGG | 0.541549 | 8_1:+14871353 | Msa1180660:CDS |
| TGCAGAAAGACGAGCACCAC+GGG | 0.544093 | 8_1:-14871339 | None:intergenic |
| AGGTTCCTCCAGGTAGAAAG+AGG | 0.544405 | 8_1:+14869399 | Msa1180660:CDS |
| GGATGTTTGCTTGACAGGAA+AGG | 0.545412 | 8_1:-14869441 | None:intergenic |
| GAAGATTTCAAGGTTCCTCC+AGG | 0.545754 | 8_1:+14869389 | Msa1180660:CDS |
| CGTGTATTACGTGTGCAACT+TGG | 0.548240 | 8_1:+14869104 | Msa1180660:CDS |
| AATACCATAAAAGAGTTGCT+TGG | 0.548770 | 8_1:+14871491 | Msa1180660:CDS |
| ATTCCTCCAAATTTGATGGT+CGG | 0.548843 | 8_1:+14869170 | Msa1180660:CDS |
| AAAGGTGGTGGCGTGTGCGA+CGG | 0.549544 | 8_1:+14867571 | Msa1180660:CDS |
| CGGAGCTACGGCGGCGTGTG+TGG | 0.553770 | 8_1:+14867598 | Msa1180660:CDS |
| GAGAGAGTGTGCGTGTACTT+TGG | 0.554033 | 8_1:+14867494 | Msa1180660:five_prime_UTR |
| ACGTGAAGAAATCGAAGCGA+TGG | 0.554895 | 8_1:+14867645 | Msa1180660:CDS |
| TCTTTCTGCAGCTGGTATCG+TGG | 0.555070 | 8_1:+14871352 | Msa1180660:CDS |
| TTAATGGAAGGTGTGATGAC+CGG | 0.556688 | 8_1:-14870075 | None:intergenic |
| ATAAAAGAGTTGCTTGGTGA+AGG | 0.558125 | 8_1:+14871497 | Msa1180660:CDS |
| GTAGGTTATCAACATGGAGT+GGG | 0.559686 | 8_1:+14870045 | Msa1180660:intron |
| CTCACCATTTCTCCAGACTT+GGG | 0.559699 | 8_1:-14869944 | None:intergenic |
| TGCAATATTGTTGCTACCCG+TGG | 0.560003 | 8_1:+14871323 | Msa1180660:CDS |
| GGCGGCGTGTGTGGTGGCGA+CGG | 0.562436 | 8_1:+14867607 | Msa1180660:CDS |
| TGCGACGGTGATCGGAGCTA+CGG | 0.565242 | 8_1:+14867586 | Msa1180660:CDS |
| TTAGATATCTGATACCTCGC+TGG | 0.567298 | 8_1:+14871274 | Msa1180660:intron |
| ATAGGTTGGTCAGGATGTTG+TGG | 0.569173 | 8_1:+14869608 | Msa1180660:intron |
| GTCCCGACCATCAAATTTGG+AGG | 0.570166 | 8_1:-14869173 | None:intergenic |
| ACCTGTTTCAGCTTCAACGT+TGG | 0.570181 | 8_1:-14867716 | None:intergenic |
| AGAGTGTGCGTGTACTTTGG+TGG | 0.570338 | 8_1:+14867497 | Msa1180660:five_prime_UTR |
| AGATACAATCACCGTTGGCG+AGG | 0.574332 | 8_1:+14871397 | Msa1180660:CDS |
| TGATGCATGGCAGACATGTC+AGG | 0.576522 | 8_1:-14871042 | None:intergenic |
| GAGTGTGCGTGTACTTTGGT+GGG | 0.577755 | 8_1:+14867498 | Msa1180660:five_prime_UTR |
| ATAATATCTGGAATGTACTT+GGG | 0.581117 | 8_1:+14870244 | Msa1180660:CDS |
| CGTGAAGAAATCGAAGCGAT+GGG | 0.582816 | 8_1:+14867646 | Msa1180660:CDS |
| AATAGGTCAATGATACAGTC+GGG | 0.583803 | 8_1:+14869801 | Msa1180660:intron |
| ATAATAAATAAATAAACTGA+AGG | 0.584838 | 8_1:-14867422 | None:intergenic |
| GCTGGTCTTGCTTCTGATGG+TGG | 0.587614 | 8_1:+14867767 | Msa1180660:CDS |
| CAATAGGTCAATGATACAGT+CGG | 0.587691 | 8_1:+14869800 | Msa1180660:intron |
| ATTCTTCTGACCCTCGCCAA+CGG | 0.592171 | 8_1:-14871408 | None:intergenic |
| AGCGGATGAGTCATGATGCA+TGG | 0.597968 | 8_1:-14871055 | None:intergenic |
| GTGCAACTTGGTGGCAAGGA+TGG | 0.599780 | 8_1:+14869116 | Msa1180660:CDS |
| GATACAATCACCGTTGGCGA+GGG | 0.600193 | 8_1:+14871398 | Msa1180660:CDS |
| GTATTACGTGTGCAACTTGG+TGG | 0.603393 | 8_1:+14869107 | Msa1180660:CDS |
| TCAGAAGAATGTGATAGCCA+TGG | 0.609370 | 8_1:+14871421 | Msa1180660:CDS |
| TGTGGTCAAAACCAAACTGA+AGG | 0.613018 | 8_1:+14871086 | Msa1180660:CDS |
| AGTCATACTCAGTTAATGGA+AGG | 0.616474 | 8_1:-14870087 | None:intergenic |
| GTGCTCAACGATAACACTAT+CGG | 0.618331 | 8_1:-14871525 | None:intergenic |
| GGAAAAGATACAATCACCGT+TGG | 0.621544 | 8_1:+14871392 | Msa1180660:CDS |
| TTTGACCACATTGAGATCAG+CGG | 0.628149 | 8_1:-14871073 | None:intergenic |
| GGTTCCTCCAGGTAGAAAGA+GGG | 0.629047 | 8_1:+14869400 | Msa1180660:CDS |
| TGTAGGTTATCAACATGGAG+TGG | 0.631248 | 8_1:+14870044 | Msa1180660:intron |
| TCGTTGATAATCTTCCTACA+GGG | 0.639680 | 8_1:+14867816 | Msa1180660:CDS |
| ACAGGTTGCTGATGCAATGA+CGG | 0.641090 | 8_1:+14867733 | Msa1180660:CDS |
| TCCCTCTCTGTTTAGGAACG+AGG | 0.652781 | 8_1:+14869040 | Msa1180660:intron |
| AGCTCCCTCTTTCTACCTGG+AGG | 0.653342 | 8_1:-14869404 | None:intergenic |
| ACGTGTGCAACTTGGTGGCA+AGG | 0.654572 | 8_1:+14869112 | Msa1180660:CDS |
| ATGACGGTGGAGATGCACGC+TGG | 0.657627 | 8_1:+14867749 | Msa1180660:CDS |
| GTGAAGAAATCGAAGCGATG+GGG | 0.658037 | 8_1:+14867647 | Msa1180660:CDS |
| CAAGCAATACCAAAATGGCA+TGG | 0.658759 | 8_1:+14869914 | Msa1180660:CDS |
| CAATCTTTCCTAGACTGCTG+GGG | 0.658971 | 8_1:-14871680 | None:intergenic |
| TAGGTTATCAACATGGAGTG+GGG | 0.662335 | 8_1:+14870046 | Msa1180660:intron |
| GACGGTGATCGGAGCTACGG+CGG | 0.662578 | 8_1:+14867589 | Msa1180660:CDS |
| AGAAAAGCAATTGAGAGACA+AGG | 0.664902 | 8_1:+14869639 | Msa1180660:CDS |
| ATTTGGAGGAATTGACACCT+CGG | 0.667035 | 8_1:-14869159 | None:intergenic |
| AATGTGATAGCCATGGATGG+TGG | 0.667416 | 8_1:+14871428 | Msa1180660:CDS |
| TCTCTGTTTAGGAACGAGGA+AGG | 0.672788 | 8_1:+14869044 | Msa1180660:intron |
| CTCATCCGCTGATCTCAATG+TGG | 0.677334 | 8_1:+14871068 | Msa1180660:CDS |
| CACCTTTCTCACTTCCAGCG+AGG | 0.678787 | 8_1:-14871288 | None:intergenic |
| ACTGATGTAGGTTATCAACA+TGG | 0.683335 | 8_1:+14870039 | Msa1180660:intron |
| GCAATTGTACCTGTTCACCA+GGG | 0.688661 | 8_1:-14870135 | None:intergenic |
| CTGCAGAAAGACGAGCACCA+CGG | 0.694987 | 8_1:-14871340 | None:intergenic |
| GATGCTGAGAGTTTAAACCC+TGG | 0.699870 | 8_1:+14870118 | Msa1180660:CDS |
| AAGAATGTGATAGCCATGGA+TGG | 0.701522 | 8_1:+14871425 | Msa1180660:CDS |
| TGGAGGCCGACATACAAACA+AGG | 0.703627 | 8_1:+14869832 | Msa1180660:CDS |
| CTCGCTGGAAGTGAGAAAGG+TGG | 0.705226 | 8_1:+14871289 | Msa1180660:CDS |
| CACGAAAGTTAGTTCCTCCG+AGG | 0.708493 | 8_1:-14869085 | None:intergenic |
| ACAGTCGGGACATTAGCTGG+AGG | 0.724132 | 8_1:+14869815 | Msa1180660:CDS |
| GGTTGCTGATGCAATGACGG+TGG | 0.729595 | 8_1:+14867736 | Msa1180660:CDS |
| TGTCAGTCGAGAATTTACCG+AGG | 0.797194 | 8_1:+14869142 | Msa1180660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAAATAAATAAACTGA+AGG | - | chr8_1:14867425-14867444 | None:intergenic | 10.0% |
| !!! | AAAATATTTTAATACTTTTC+AGG | - | chr8_1:14869007-14869026 | None:intergenic | 10.0% |
| !! | AAACTAAGTATAAAATGTAA+AGG | - | chr8_1:14869575-14869594 | None:intergenic | 15.0% |
| !!! | TTTTGTATCAACTATTTTTT+TGG | + | chr8_1:14871637-14871656 | Msa1180660:three_prime_UTR | 15.0% |
| !!! | TTTTATCAAATAAATACCAG+TGG | - | chr8_1:14868075-14868094 | None:intergenic | 20.0% |
| !!! | TTCTTTGTTTGTTTATAAGT+TGG | + | chr8_1:14868202-14868221 | Msa1180660:intron | 20.0% |
| !! | TTAAATGTTATGATAAGTGA+CGG | + | chr8_1:14868427-14868446 | Msa1180660:intron | 20.0% |
| !! | TTTATTGAATTTAGCTGTTA+TGG | + | chr8_1:14868534-14868553 | Msa1180660:intron | 20.0% |
| !! | TGTTTATTTAAGCTGTTTAT+CGG | + | chr8_1:14868561-14868580 | Msa1180660:intron | 20.0% |
| !! | ATATATAGACACATAAAAAG+TGG | - | chr8_1:14868773-14868792 | None:intergenic | 20.0% |
| !!! | AGATGTAATTGTTTTTCTAA+TGG | + | chr8_1:14868877-14868896 | Msa1180660:intron | 20.0% |
| !! | CTATAAAAATTCAAAATGCT+CGG | - | chr8_1:14868984-14869003 | None:intergenic | 20.0% |
| !! | AAGAGTAAATAGTAATTGTT+AGG | - | chr8_1:14869247-14869266 | None:intergenic | 20.0% |
| !!! | TGAATCACATTTTTATAGAA+TGG | - | chr8_1:14869314-14869333 | None:intergenic | 20.0% |
| !! | ATTCTATAAAAATGTGATTC+AGG | + | chr8_1:14869313-14869332 | Msa1180660:intron | 20.0% |
| !!! | TTCTGGAGTATAATTATTTT+TGG | + | chr8_1:14869746-14869765 | Msa1180660:intron | 20.0% |
| !! | ATTAATAGCCTCATTTATTA+AGG | - | chr8_1:14870180-14870199 | None:intergenic | 20.0% |
| !! | AATTTGTACCTTAATATGAA+TGG | - | chr8_1:14870352-14870371 | None:intergenic | 20.0% |
| !! | TGATAAATCAAGTGAATTTA+AGG | + | chr8_1:14870710-14870729 | Msa1180660:intron | 20.0% |
| !! | TATAAAATTCTTGAATTCCT+TGG | + | chr8_1:14870933-14870952 | Msa1180660:intron | 20.0% |
| !!! | TCTTTTTGGAAAACATTTAT+CGG | - | chr8_1:14871147-14871166 | None:intergenic | 20.0% |
| !!! | TTTCCAAAAAGACTTTTTTT+AGG | + | chr8_1:14871155-14871174 | Msa1180660:intron | 20.0% |
| !!! | TTCCAAAAAGACTTTTTTTA+GGG | + | chr8_1:14871156-14871175 | Msa1180660:intron | 20.0% |
| !! | AAACAAAAAAGAATGAAGTT+AGG | - | chr8_1:14871235-14871254 | None:intergenic | 20.0% |
| !! | TTAGCAATTATCATGTTATT+CGG | + | chr8_1:14871613-14871632 | Msa1180660:exon | 20.0% |
| !! | AGCAAATATTGCAAAAAAAA+AGG | - | chr8_1:14871728-14871747 | None:intergenic | 20.0% |
| !!! | ATCTTTTTGGGTTTTAATGT+CGG | - | chr8_1:14867548-14867567 | None:intergenic | 25.0% |
| ! | ACATTAAAACCCAAAAAGAT+GGG | + | chr8_1:14867548-14867567 | Msa1180660:exon | 25.0% |
| ! | TAGATCAACATGATTAAGAT+TGG | - | chr8_1:14867857-14867876 | None:intergenic | 25.0% |
| ! | GAGATTTATTTAGAGAATGT+TGG | + | chr8_1:14868240-14868259 | Msa1180660:intron | 25.0% |
| !! | GTAATTGTTGATAAAGTAGA+CGG | + | chr8_1:14868363-14868382 | Msa1180660:intron | 25.0% |
| ! | TCATTCAAACTTCAATAAGA+AGG | - | chr8_1:14868601-14868620 | None:intergenic | 25.0% |
| ! | TAACAATAAATGAGCACAAA+TGG | - | chr8_1:14868632-14868651 | None:intergenic | 25.0% |
| !!! | ATAAACTGATTTTGTACTAG+AGG | + | chr8_1:14868652-14868671 | Msa1180660:intron | 25.0% |
| ! | AGTTATGAAATGTGACTAAT+GGG | - | chr8_1:14868921-14868940 | None:intergenic | 25.0% |
| ! | GATTAAAGCAAATAACTTTC+TGG | - | chr8_1:14869271-14869290 | None:intergenic | 25.0% |
| !! | GCGTTTTCAATTAATTTTTC+TGG | + | chr8_1:14869729-14869748 | Msa1180660:intron | 25.0% |
| ! | TTATATATTCAGCATCCAAT+AGG | + | chr8_1:14869784-14869803 | Msa1180660:intron | 25.0% |
| ! | CTTATTTGCCTTAATAAATG+AGG | + | chr8_1:14870169-14870188 | Msa1180660:intron | 25.0% |
| !!! | ACTTTTGAGAAGATAATATC+TGG | + | chr8_1:14870232-14870251 | Msa1180660:CDS | 25.0% |
| !! | ATAATATCTGGAATGTACTT+GGG | + | chr8_1:14870244-14870263 | Msa1180660:CDS | 25.0% |
| ! | TGAAAGTTCCATTCATATTA+AGG | + | chr8_1:14870341-14870360 | Msa1180660:CDS | 25.0% |
| ! | TTTCTGATAATCTAATTGAG+AGG | + | chr8_1:14870475-14870494 | Msa1180660:intron | 25.0% |
| ! | ATAATCTAATTGAGAGGTTA+TGG | + | chr8_1:14870481-14870500 | Msa1180660:intron | 25.0% |
| !! | TTATGCTTTATATCCTGTTT+TGG | + | chr8_1:14870519-14870538 | Msa1180660:intron | 25.0% |
| ! | CTTGATTTATCATTGTTAAG+TGG | - | chr8_1:14870702-14870721 | None:intergenic | 25.0% |
| !!! | TAGAATTTTAAAGTTCGATG+TGG | + | chr8_1:14871195-14871214 | Msa1180660:intron | 25.0% |
| ! | ATGATAATTGCTAAACATCA+AGG | - | chr8_1:14871607-14871626 | None:intergenic | 25.0% |
| !! | GATGATTTTGGGAAGATTTT+AGG | - | chr8_1:14867399-14867418 | None:intergenic | 30.0% |
| ! | ACTGAAGGATAGATGATTTT+GGG | - | chr8_1:14867410-14867429 | None:intergenic | 30.0% |
| ! | AACTGAAGGATAGATGATTT+TGG | - | chr8_1:14867411-14867430 | None:intergenic | 30.0% |
| GACATTAAAACCCAAAAAGA+TGG | + | chr8_1:14867547-14867566 | Msa1180660:exon | 30.0% | |
| AAAAGCAATAGCGATATTGA+AGG | + | chr8_1:14867670-14867689 | Msa1180660:CDS | 30.0% | |
| !! | TATAAGTTGGCTTTGTATCA+TGG | + | chr8_1:14868215-14868234 | Msa1180660:intron | 30.0% |
| ! | ACGAATGTTGATAAAGTAGA+TGG | + | chr8_1:14868480-14868499 | Msa1180660:intron | 30.0% |
| CAGTTATGAAATGTGACTAA+TGG | - | chr8_1:14868922-14868941 | None:intergenic | 30.0% | |
| TGAAGAAAGTGAAGATTTCA+AGG | + | chr8_1:14869379-14869398 | Msa1180660:CDS | 30.0% | |
| TGTAAAGGTGAAAGAATAAC+TGG | - | chr8_1:14869560-14869579 | None:intergenic | 30.0% | |
| !!! | AGTTTTGTTGTCGTTTACAT+AGG | + | chr8_1:14869590-14869609 | Msa1180660:intron | 30.0% |
| TGATATGAACATAACAGCTT+TGG | + | chr8_1:14869665-14869684 | Msa1180660:CDS | 30.0% | |
| TCAATATATGAGACTGATGT+AGG | + | chr8_1:14870027-14870046 | Msa1180660:intron | 30.0% | |
| GAATAGTCATACTCAGTTAA+TGG | - | chr8_1:14870094-14870113 | None:intergenic | 30.0% | |
| CATGTATGGTTGAAAATTTC+AGG | - | chr8_1:14870209-14870228 | None:intergenic | 30.0% | |
| TTCTCAAAAGTCTACATGTA+TGG | - | chr8_1:14870223-14870242 | None:intergenic | 30.0% | |
| ! | GATAATATCTGGAATGTACT+TGG | + | chr8_1:14870243-14870262 | Msa1180660:CDS | 30.0% |
| ! | TCGTAGAGTACTATACAAAA+TGG | + | chr8_1:14870276-14870295 | Msa1180660:CDS | 30.0% |
| !! | AATGGAACTTTCAGTTTTGA+AGG | - | chr8_1:14870334-14870353 | None:intergenic | 30.0% |
| ATAGTAACATTCGTGATTGT+TGG | + | chr8_1:14870409-14870428 | Msa1180660:intron | 30.0% | |
| ! | GAGGTTATGGAGAATTTTTA+TGG | + | chr8_1:14870494-14870513 | Msa1180660:intron | 30.0% |
| ! | AAAGTGAATTTTCTGACCTT+AGG | + | chr8_1:14870573-14870592 | Msa1180660:intron | 30.0% |
| ! | AGTTTTCACTATCTTCTGTT+TGG | - | chr8_1:14870860-14870879 | None:intergenic | 30.0% |
| ! | TATAAGAAGCACATTAACCA+AGG | - | chr8_1:14870953-14870972 | None:intergenic | 30.0% |
| TCGATGATAATACTGGTAAA+GGG | - | chr8_1:14870981-14871000 | None:intergenic | 30.0% | |
| TTCGATGATAATACTGGTAA+AGG | - | chr8_1:14870982-14871001 | None:intergenic | 30.0% | |
| AAGAACTTCGATGATAATAC+TGG | - | chr8_1:14870988-14871007 | None:intergenic | 30.0% | |
| ! | GACCCTAAAAAAAGTCTTTT+TGG | - | chr8_1:14871161-14871180 | None:intergenic | 30.0% |
| AATACCATAAAAGAGTTGCT+TGG | + | chr8_1:14871491-14871510 | Msa1180660:CDS | 30.0% | |
| ! | CTAATTTCTACATTGCTGTT+AGG | + | chr8_1:14871789-14871808 | Msa1180660:three_prime_UTR | 30.0% |
| AAAACCCAAAAAGATGGGAA+AGG | + | chr8_1:14867553-14867572 | Msa1180660:exon | 35.0% | |
| AGCGATATTGAAGGAATTTG+AGG | + | chr8_1:14867679-14867698 | Msa1180660:CDS | 35.0% | |
| !! | TTCGTTGATAATCTTCCTAC+AGG | + | chr8_1:14867815-14867834 | Msa1180660:CDS | 35.0% |
| !! | TCGTTGATAATCTTCCTACA+GGG | + | chr8_1:14867816-14867835 | Msa1180660:CDS | 35.0% |
| TCAAAAAAGTGATACCCTGT+AGG | - | chr8_1:14867833-14867852 | None:intergenic | 35.0% | |
| TCGGCTATACGAATGAAATT+AGG | - | chr8_1:14867944-14867963 | None:intergenic | 35.0% | |
| ! | GATTGTGAACATTTGTTGCT+TGG | + | chr8_1:14868726-14868745 | Msa1180660:intron | 35.0% |
| GAAGTTGCTAGTTGACAATT+GGG | + | chr8_1:14868847-14868866 | Msa1180660:intron | 35.0% | |
| ! | GGAAGGACTATTTTATGCAT+TGG | + | chr8_1:14869061-14869080 | Msa1180660:CDS | 35.0% |
| ! | CTATTTTATGCATTGGACCT+CGG | + | chr8_1:14869068-14869087 | Msa1180660:CDS | 35.0% |
| GTCAATTCCTCCAAATTTGA+TGG | + | chr8_1:14869166-14869185 | Msa1180660:CDS | 35.0% | |
| ! | ATTCCTCCAAATTTGATGGT+CGG | + | chr8_1:14869170-14869189 | Msa1180660:CDS | 35.0% |
| GGTCATGTTTCTCATACAAA+TGG | - | chr8_1:14869293-14869312 | None:intergenic | 35.0% | |
| AAGCAAACATCCATTTCTTC+TGG | + | chr8_1:14869452-14869471 | Msa1180660:CDS | 35.0% | |
| AGCAAACATCCATTTCTTCT+GGG | + | chr8_1:14869453-14869472 | Msa1180660:CDS | 35.0% | |
| AACCTTATCAACTGGACAAA+AGG | + | chr8_1:14869476-14869495 | Msa1180660:CDS | 35.0% | |
| CATCAAAGCAATTAGGATTC+AGG | - | chr8_1:14869527-14869546 | None:intergenic | 35.0% | |
| !! | GGAAAAGCATCAAAGCAATT+AGG | - | chr8_1:14869534-14869553 | None:intergenic | 35.0% |
| AGGTGAAAGAATAACTGGAA+AGG | - | chr8_1:14869555-14869574 | None:intergenic | 35.0% | |
| ! | TTGTTGTCGTTTACATAGGT+TGG | + | chr8_1:14869594-14869613 | Msa1180660:intron | 35.0% |
| AGAAAAGCAATTGAGAGACA+AGG | + | chr8_1:14869639-14869658 | Msa1180660:CDS | 35.0% | |
| CAATAGGTCAATGATACAGT+CGG | + | chr8_1:14869800-14869819 | Msa1180660:intron | 35.0% | |
| AATAGGTCAATGATACAGTC+GGG | + | chr8_1:14869801-14869820 | Msa1180660:intron | 35.0% | |
| ! | TGACATCCTTGTTTGTATGT+CGG | - | chr8_1:14869841-14869860 | None:intergenic | 35.0% |
| !!! | GTCATTGCTGCTGTTATTTT+AGG | + | chr8_1:14869857-14869876 | Msa1180660:CDS | 35.0% |
| ACTGATGTAGGTTATCAACA+TGG | + | chr8_1:14870039-14870058 | Msa1180660:intron | 35.0% | |
| AGTCATACTCAGTTAATGGA+AGG | - | chr8_1:14870090-14870109 | None:intergenic | 35.0% | |
| AATGTTACTATGCATGCAAG+TGG | - | chr8_1:14870400-14870419 | None:intergenic | 35.0% | |
| TTTCTCCTCATAACTTGAGA+TGG | + | chr8_1:14870452-14870471 | Msa1180660:intron | 35.0% | |
| AGAAACCATCTCAAGTTATG+AGG | - | chr8_1:14870460-14870479 | None:intergenic | 35.0% | |
| ! | TCTTTTTCCAGTACCTTCTT+AGG | + | chr8_1:14870646-14870665 | Msa1180660:intron | 35.0% |
| GTTTGGAGAGAAATTGAACT+TGG | - | chr8_1:14870843-14870862 | None:intergenic | 35.0% | |
| TTGTGTAAGCAATATTCGCA+TGG | - | chr8_1:14870903-14870922 | None:intergenic | 35.0% | |
| CGATGATAATACTGGTAAAG+GGG | - | chr8_1:14870980-14870999 | None:intergenic | 35.0% | |
| !! | CTCTAAAATCTCCTTCAGTT+TGG | - | chr8_1:14871100-14871119 | None:intergenic | 35.0% |
| ! | CAAACTGAAGGAGATTTTAG+AGG | + | chr8_1:14871098-14871117 | Msa1180660:CDS | 35.0% |
| TCGATGTGGTAAACTTTCAT+TGG | + | chr8_1:14871209-14871228 | Msa1180660:intron | 35.0% | |
| ! | TTCACCAAGCAACTCTTTTA+TGG | - | chr8_1:14871498-14871517 | None:intergenic | 35.0% |
| ! | ATAAAAGAGTTGCTTGGTGA+AGG | + | chr8_1:14871497-14871516 | Msa1180660:CDS | 35.0% |
| GACATGCACACATATACTTT+AGG | + | chr8_1:14871702-14871721 | Msa1180660:three_prime_UTR | 35.0% | |
| TAGTACATTGCAGAATTCTC+AGG | - | chr8_1:14871772-14871791 | None:intergenic | 35.0% | |
| ! | ACCACCTTTCCCATCTTTTT+GGG | - | chr8_1:14867560-14867579 | None:intergenic | 40.0% |
| !! | AGGCTTTGAAACATGTACAC+CGG | + | chr8_1:14867981-14868000 | Msa1180660:intron | 40.0% |
| ! | CACCACTGGTATTTGAAACA+TGG | + | chr8_1:14868022-14868041 | Msa1180660:intron | 40.0% |
| GTCCATGTTTCAAATACCAG+TGG | - | chr8_1:14868027-14868046 | None:intergenic | 40.0% | |
| CATATGTGTCTGTGTCATGT+TGG | + | chr8_1:14868114-14868133 | Msa1180660:intron | 40.0% | |
| CGAAGTTGCTAGTTGACAAT+TGG | + | chr8_1:14868846-14868865 | Msa1180660:intron | 40.0% | |
| CTTTACATCCCTCTCTGTTT+AGG | + | chr8_1:14869033-14869052 | Msa1180660:intron | 40.0% | |
| ATTTGGAGGAATTGACACCT+CGG | - | chr8_1:14869162-14869181 | None:intergenic | 40.0% | |
| ! | TTCCTCCAAATTTGATGGTC+GGG | + | chr8_1:14869171-14869190 | Msa1180660:CDS | 40.0% |
| TTGCTTGACAGGAAAGGAAA+AGG | - | chr8_1:14869438-14869457 | None:intergenic | 40.0% | |
| GAAATGGATGTTTGCTTGAC+AGG | - | chr8_1:14869449-14869468 | None:intergenic | 40.0% | |
| GATAAGGTTCCCAGAAGAAA+TGG | - | chr8_1:14869465-14869484 | None:intergenic | 40.0% | |
| !! | AGCCTTTTGTCCAGTTGATA+AGG | - | chr8_1:14869481-14869500 | None:intergenic | 40.0% |
| CGACTGTATCATTGACCTAT+TGG | - | chr8_1:14869802-14869821 | None:intergenic | 40.0% | |
| !!! | GCTGCTGTTATTTTAGGTAC+CGG | + | chr8_1:14869863-14869882 | Msa1180660:CDS | 40.0% |
| GTGCTCAAGCAATACCAAAA+TGG | + | chr8_1:14869909-14869928 | Msa1180660:CDS | 40.0% | |
| CAAGCAATACCAAAATGGCA+TGG | + | chr8_1:14869914-14869933 | Msa1180660:CDS | 40.0% | |
| TGTAGGTTATCAACATGGAG+TGG | + | chr8_1:14870044-14870063 | Msa1180660:intron | 40.0% | |
| GTAGGTTATCAACATGGAGT+GGG | + | chr8_1:14870045-14870064 | Msa1180660:intron | 40.0% | |
| TAGGTTATCAACATGGAGTG+GGG | + | chr8_1:14870046-14870065 | Msa1180660:intron | 40.0% | |
| ! | TTAATGGAAGGTGTGATGAC+CGG | - | chr8_1:14870078-14870097 | None:intergenic | 40.0% |
| ACAAAATGGCTGAAGAAGCT+TGG | + | chr8_1:14870290-14870309 | Msa1180660:CDS | 40.0% | |
| !!! | GCTGAAGAAGCTTGGTTTTT+TGG | + | chr8_1:14870298-14870317 | Msa1180660:CDS | 40.0% |
| GTAACATTCGTGATTGTTGG+TGG | + | chr8_1:14870412-14870431 | Msa1180660:intron | 40.0% | |
| !!! | TTATATCCTGTTTTGGCCTC+TGG | + | chr8_1:14870526-14870545 | Msa1180660:intron | 40.0% |
| !! | TGGCCTCATTTTAGTGTTCA+GGG | + | chr8_1:14870621-14870640 | Msa1180660:intron | 40.0% |
| ATGCCCTGAACACTAAAATG+AGG | - | chr8_1:14870627-14870646 | None:intergenic | 40.0% | |
| ! | GATGATTCCTAAGAAGGTAC+TGG | - | chr8_1:14870656-14870675 | None:intergenic | 40.0% |
| ! | GCTCTAGATGATTCCTAAGA+AGG | - | chr8_1:14870662-14870681 | None:intergenic | 40.0% |
| ACCATAAGAATTTGACGTGC+AGG | + | chr8_1:14871016-14871035 | Msa1180660:intron | 40.0% | |
| TCCTGCACGTCAAATTCTTA+TGG | - | chr8_1:14871020-14871039 | None:intergenic | 40.0% | |
| TTTGACCACATTGAGATCAG+CGG | - | chr8_1:14871076-14871095 | None:intergenic | 40.0% | |
| TGTGGTCAAAACCAAACTGA+AGG | + | chr8_1:14871086-14871105 | Msa1180660:CDS | 40.0% | |
| TTAGATATCTGATACCTCGC+TGG | + | chr8_1:14871274-14871293 | Msa1180660:intron | 40.0% | |
| ! | GTGGGAATTCTGAAGAAGTT+GGG | + | chr8_1:14871371-14871390 | Msa1180660:CDS | 40.0% |
| GGAAAAGATACAATCACCGT+TGG | + | chr8_1:14871392-14871411 | Msa1180660:CDS | 40.0% | |
| TCAGAAGAATGTGATAGCCA+TGG | + | chr8_1:14871421-14871440 | Msa1180660:CDS | 40.0% | |
| AAGAATGTGATAGCCATGGA+TGG | + | chr8_1:14871425-14871444 | Msa1180660:CDS | 40.0% | |
| GTGCTCAACGATAACACTAT+CGG | - | chr8_1:14871528-14871547 | None:intergenic | 40.0% | |
| TCAATCTTTCCTAGACTGCT+GGG | - | chr8_1:14871684-14871703 | None:intergenic | 40.0% | |
| ACCCAAAAAGATGGGAAAGG+TGG | + | chr8_1:14867556-14867575 | Msa1180660:exon | 45.0% | |
| ! | CACCACCTTTCCCATCTTTT+TGG | - | chr8_1:14867561-14867580 | None:intergenic | 45.0% |
| CAAAAAGATGGGAAAGGTGG+TGG | + | chr8_1:14867559-14867578 | Msa1180660:exon | 45.0% | |
| ACGTGAAGAAATCGAAGCGA+TGG | + | chr8_1:14867645-14867664 | Msa1180660:CDS | 45.0% | |
| CGTGAAGAAATCGAAGCGAT+GGG | + | chr8_1:14867646-14867665 | Msa1180660:CDS | 45.0% | |
| GTGAAGAAATCGAAGCGATG+GGG | + | chr8_1:14867647-14867666 | Msa1180660:CDS | 45.0% | |
| ACCAACGTTGAAGCTGAAAC+AGG | + | chr8_1:14867715-14867734 | Msa1180660:CDS | 45.0% | |
| ACCTGTTTCAGCTTCAACGT+TGG | - | chr8_1:14867719-14867738 | None:intergenic | 45.0% | |
| ACAGGTTGCTGATGCAATGA+CGG | + | chr8_1:14867733-14867752 | Msa1180660:CDS | 45.0% | |
| ! | AAAGCCTTATCCCACCAAGT+GGG | - | chr8_1:14867968-14867987 | None:intergenic | 45.0% |
| ! | GACTTGTTTAGTGTCGTGTC+TGG | - | chr8_1:14868051-14868070 | None:intergenic | 45.0% |
| GACACTAAACAAGTCACCAC+TGG | + | chr8_1:14868056-14868075 | Msa1180660:intron | 45.0% | |
| TCGATGCTAGAGAGTTGTTG+AGG | + | chr8_1:14868167-14868186 | Msa1180660:intron | 45.0% | |
| TCCTCGTTCCTAAACAGAGA+GGG | - | chr8_1:14869044-14869063 | None:intergenic | 45.0% | |
| TTCCTCGTTCCTAAACAGAG+AGG | - | chr8_1:14869045-14869064 | None:intergenic | 45.0% | |
| TCTCTGTTTAGGAACGAGGA+AGG | + | chr8_1:14869044-14869063 | Msa1180660:intron | 45.0% | |
| ! | TTTTATGCATTGGACCTCGG+AGG | + | chr8_1:14869071-14869090 | Msa1180660:CDS | 45.0% |
| CGTGTATTACGTGTGCAACT+TGG | + | chr8_1:14869104-14869123 | Msa1180660:CDS | 45.0% | |
| GTATTACGTGTGCAACTTGG+TGG | + | chr8_1:14869107-14869126 | Msa1180660:CDS | 45.0% | |
| TGTCAGTCGAGAATTTACCG+AGG | + | chr8_1:14869142-14869161 | Msa1180660:CDS | 45.0% | |
| GATGTCCCGACCATCAAATT+TGG | - | chr8_1:14869179-14869198 | None:intergenic | 45.0% | |
| GAAGATTTCAAGGTTCCTCC+AGG | + | chr8_1:14869389-14869408 | Msa1180660:CDS | 45.0% | |
| GGATGTTTGCTTGACAGGAA+AGG | - | chr8_1:14869444-14869463 | None:intergenic | 45.0% | |
| ! | CTTCTGGGAACCTTATCAAC+TGG | + | chr8_1:14869468-14869487 | Msa1180660:CDS | 45.0% |
| !! | GTCGTTTACATAGGTTGGTC+AGG | + | chr8_1:14869599-14869618 | Msa1180660:intron | 45.0% |
| !! | ATAGGTTGGTCAGGATGTTG+TGG | + | chr8_1:14869608-14869627 | Msa1180660:intron | 45.0% |
| !! | GGCAAATCACCATGCCATTT+TGG | - | chr8_1:14869926-14869945 | None:intergenic | 45.0% |
| TTTGCCCAAGTCTGGAGAAA+TGG | + | chr8_1:14869940-14869959 | Msa1180660:CDS | 45.0% | |
| CTCACCATTTCTCCAGACTT+GGG | - | chr8_1:14869947-14869966 | None:intergenic | 45.0% | |
| ACTCACCATTTCTCCAGACT+TGG | - | chr8_1:14869948-14869967 | None:intergenic | 45.0% | |
| GATGCTGAGAGTTTAAACCC+TGG | + | chr8_1:14870118-14870137 | Msa1180660:CDS | 45.0% | |
| GAGTTTAAACCCTGGTGAAC+AGG | + | chr8_1:14870126-14870145 | Msa1180660:CDS | 45.0% | |
| GCAATTGTACCTGTTCACCA+GGG | - | chr8_1:14870138-14870157 | None:intergenic | 45.0% | |
| AAACTATCCTGCCTCGTTGA+AGG | - | chr8_1:14870599-14870618 | None:intergenic | 45.0% | |
| !! | AACGAGGCAGGATAGTTTTG+TGG | + | chr8_1:14870601-14870620 | Msa1180660:intron | 45.0% |
| !! | GTGGCCTCATTTTAGTGTTC+AGG | + | chr8_1:14870620-14870639 | Msa1180660:intron | 45.0% |
| TGCAATATTGTTGCTACCCG+TGG | + | chr8_1:14871323-14871342 | Msa1180660:CDS | 45.0% | |
| ! | CGTGGGAATTCTGAAGAAGT+TGG | + | chr8_1:14871370-14871389 | Msa1180660:CDS | 45.0% |
| AATGTGATAGCCATGGATGG+TGG | + | chr8_1:14871428-14871447 | Msa1180660:CDS | 45.0% | |
| CTCATATAGTCCACCATCCA+TGG | - | chr8_1:14871441-14871460 | None:intergenic | 45.0% | |
| ATCGTTGAGCACTCAAACGA+TGG | + | chr8_1:14871536-14871555 | Msa1180660:CDS | 45.0% | |
| TCAAACGATGGTTCAGGAAC+TGG | + | chr8_1:14871548-14871567 | Msa1180660:CDS | 45.0% | |
| TAGACTGCTGGGGTCAAAAT+TGG | - | chr8_1:14871673-14871692 | None:intergenic | 45.0% | |
| !! | AATTTTGACCCCAGCAGTCT+AGG | + | chr8_1:14871672-14871691 | Msa1180660:three_prime_UTR | 45.0% |
| CAATCTTTCCTAGACTGCTG+GGG | - | chr8_1:14871683-14871702 | None:intergenic | 45.0% | |
| GTCAATCTTTCCTAGACTGC+TGG | - | chr8_1:14871685-14871704 | None:intergenic | 45.0% | |
| !!! | ATTTATTTTTATATTTTGAT+TGG | - | chr8_1:14867450-14867469 | None:intergenic | 5.0% |
| !!! | TTTAAAATTTCTATAAAAAA+AGG | + | chr8_1:14868305-14868324 | Msa1180660:intron | 5.0% |
| !! | TTAAAATTTCTATAAAAAAA+GGG | + | chr8_1:14868306-14868325 | Msa1180660:intron | 5.0% |
| ! | GAGAGAGTGTGCGTGTACTT+TGG | + | chr8_1:14867494-14867513 | Msa1180660:five_prime_UTR | 50.0% |
| AGAGTGTGCGTGTACTTTGG+TGG | + | chr8_1:14867497-14867516 | Msa1180660:five_prime_UTR | 50.0% | |
| GAGTGTGCGTGTACTTTGGT+GGG | + | chr8_1:14867498-14867517 | Msa1180660:five_prime_UTR | 50.0% | |
| TTCGTATAGCCGATCCCACT+TGG | + | chr8_1:14867951-14867970 | Msa1180660:intron | 50.0% | |
| TATAGCCGATCCCACTTGGT+GGG | + | chr8_1:14867955-14867974 | Msa1180660:intron | 50.0% | |
| CTTATCCCACCAAGTGGGAT+CGG | - | chr8_1:14867963-14867982 | None:intergenic | 50.0% | |
| ! | CAAAGCCTTATCCCACCAAG+TGG | - | chr8_1:14867969-14867988 | None:intergenic | 50.0% |
| GACGTGTTTAGTGTCGTGTC+CGG | - | chr8_1:14868003-14868022 | None:intergenic | 50.0% | |
| GACACTAAACACGTCACCAC+TGG | + | chr8_1:14868008-14868027 | Msa1180660:intron | 50.0% | |
| TCCCTCTCTGTTTAGGAACG+AGG | + | chr8_1:14869040-14869059 | Msa1180660:intron | 50.0% | |
| CACGAAAGTTAGTTCCTCCG+AGG | - | chr8_1:14869088-14869107 | None:intergenic | 50.0% | |
| GTCCCGACCATCAAATTTGG+AGG | - | chr8_1:14869176-14869195 | None:intergenic | 50.0% | |
| AGGTTCCTCCAGGTAGAAAG+AGG | + | chr8_1:14869399-14869418 | Msa1180660:CDS | 50.0% | |
| GGTTCCTCCAGGTAGAAAGA+GGG | + | chr8_1:14869400-14869419 | Msa1180660:CDS | 50.0% | |
| GATACAGTCGGGACATTAGC+TGG | + | chr8_1:14869812-14869831 | Msa1180660:CDS | 50.0% | |
| TGGAGGCCGACATACAAACA+AGG | + | chr8_1:14869832-14869851 | Msa1180660:CDS | 50.0% | |
| CACGTACGCTGCATTTGTTC+CGG | - | chr8_1:14869885-14869904 | None:intergenic | 50.0% | |
| ! | CATGGTGATTTGCCCAAGTC+TGG | + | chr8_1:14869932-14869951 | Msa1180660:CDS | 50.0% |
| ACATGGAGTGGGGAAACTTC+CGG | + | chr8_1:14870056-14870075 | Msa1180660:CDS | 50.0% | |
| CGCAATTGTACCTGTTCACC+AGG | - | chr8_1:14870139-14870158 | None:intergenic | 50.0% | |
| !!! | ATCCTGTTTTGGCCTCTGGT+TGG | + | chr8_1:14870530-14870549 | Msa1180660:intron | 50.0% |
| AAGTAGTCTGCTCCAACCAG+AGG | - | chr8_1:14870545-14870564 | None:intergenic | 50.0% | |
| TGATGCATGGCAGACATGTC+AGG | - | chr8_1:14871045-14871064 | None:intergenic | 50.0% | |
| AGCGGATGAGTCATGATGCA+TGG | - | chr8_1:14871058-14871077 | None:intergenic | 50.0% | |
| CTCATCCGCTGATCTCAATG+TGG | + | chr8_1:14871068-14871087 | Msa1180660:CDS | 50.0% | |
| TACCTCGCTGGAAGTGAGAA+AGG | + | chr8_1:14871286-14871305 | Msa1180660:CDS | 50.0% | |
| TCTTTCTGCAGCTGGTATCG+TGG | + | chr8_1:14871352-14871371 | Msa1180660:CDS | 50.0% | |
| CTTTCTGCAGCTGGTATCGT+GGG | + | chr8_1:14871353-14871372 | Msa1180660:CDS | 50.0% | |
| AGATACAATCACCGTTGGCG+AGG | + | chr8_1:14871397-14871416 | Msa1180660:CDS | 50.0% | |
| GATACAATCACCGTTGGCGA+GGG | + | chr8_1:14871398-14871417 | Msa1180660:CDS | 50.0% | |
| ATTCTTCTGACCCTCGCCAA+CGG | - | chr8_1:14871411-14871430 | None:intergenic | 50.0% | |
| GAGCACTCAAACGATGGTTC+AGG | + | chr8_1:14871542-14871561 | Msa1180660:CDS | 50.0% | |
| GGTTGCTGATGCAATGACGG+TGG | + | chr8_1:14867736-14867755 | Msa1180660:CDS | 55.0% | |
| !! | CACGCTGGTCTTGCTTCTGA+TGG | + | chr8_1:14867764-14867783 | Msa1180660:CDS | 55.0% |
| !! | GCTGGTCTTGCTTCTGATGG+TGG | + | chr8_1:14867767-14867786 | Msa1180660:CDS | 55.0% |
| GTATAGCCGATCCCACTTGG+TGG | + | chr8_1:14867954-14867973 | Msa1180660:intron | 55.0% | |
| ! | CGATCCCACTTGGTGGGATA+AGG | + | chr8_1:14867961-14867980 | Msa1180660:intron | 55.0% |
| ! | ACGTGTGCAACTTGGTGGCA+AGG | + | chr8_1:14869112-14869131 | Msa1180660:CDS | 55.0% |
| ! | GTGCAACTTGGTGGCAAGGA+TGG | + | chr8_1:14869116-14869135 | Msa1180660:CDS | 55.0% |
| AGCTCCCTCTTTCTACCTGG+AGG | - | chr8_1:14869407-14869426 | None:intergenic | 55.0% | |
| CCTAGCTCCCTCTTTCTACC+TGG | - | chr8_1:14869410-14869429 | None:intergenic | 55.0% | |
| CCAGGTAGAAAGAGGGAGCT+AGG | + | chr8_1:14869407-14869426 | Msa1180660:CDS | 55.0% | |
| ACAGTCGGGACATTAGCTGG+AGG | + | chr8_1:14869815-14869834 | Msa1180660:CDS | 55.0% | |
| CGGAACAAATGCAGCGTACG+TGG | + | chr8_1:14869883-14869902 | Msa1180660:CDS | 55.0% | |
| CTCCAACCAGAGGCCAAAAC+AGG | - | chr8_1:14870535-14870554 | None:intergenic | 55.0% | |
| CTGACCTTAGGCCTTCAACG+AGG | + | chr8_1:14870585-14870604 | Msa1180660:intron | 55.0% | |
| CACCTTTCTCACTTCCAGCG+AGG | - | chr8_1:14871291-14871310 | None:intergenic | 55.0% | |
| CTCGCTGGAAGTGAGAAAGG+TGG | + | chr8_1:14871289-14871308 | Msa1180660:CDS | 55.0% | |
| TGCAGAAAGACGAGCACCAC+GGG | - | chr8_1:14871342-14871361 | None:intergenic | 55.0% | |
| CTGCAGAAAGACGAGCACCA+CGG | - | chr8_1:14871343-14871362 | None:intergenic | 55.0% | |
| ! | AAAGGTGGTGGCGTGTGCGA+CGG | + | chr8_1:14867571-14867590 | Msa1180660:CDS | 60.0% |
| TGCGACGGTGATCGGAGCTA+CGG | + | chr8_1:14867586-14867605 | Msa1180660:CDS | 60.0% | |
| ATGACGGTGGAGATGCACGC+TGG | + | chr8_1:14867749-14867768 | Msa1180660:CDS | 60.0% | |
| CCTGCCTCGTTGAAGGCCTA+AGG | - | chr8_1:14870592-14870611 | None:intergenic | 60.0% | |
| CCTTAGGCCTTCAACGAGGC+AGG | + | chr8_1:14870589-14870608 | Msa1180660:intron | 60.0% | |
| GGTGCTCGTCTTTCTGCAGC+TGG | + | chr8_1:14871344-14871363 | Msa1180660:CDS | 60.0% | |
| GTGGCGTGTGCGACGGTGAT+CGG | + | chr8_1:14867578-14867597 | Msa1180660:CDS | 65.0% | |
| GACGGTGATCGGAGCTACGG+CGG | + | chr8_1:14867589-14867608 | Msa1180660:CDS | 65.0% | |
| AGCTACGGCGGCGTGTGTGG+TGG | + | chr8_1:14867601-14867620 | Msa1180660:CDS | 70.0% | |
| CGGAGCTACGGCGGCGTGTG+TGG | + | chr8_1:14867598-14867617 | Msa1180660:CDS | 75.0% | |
| ! | GGCGGCGTGTGTGGTGGCGA+CGG | + | chr8_1:14867607-14867626 | Msa1180660:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 14867384 | 14871831 | 14867384 | ID=Msa1180660;Name=Msa1180660 |
| chr8_1 | mRNA | 14867384 | 14871831 | 14867384 | ID=Msa1180660-mRNA-1;Parent=Msa1180660;Name=Msa1180660-mRNA-1;_AED=0.08;_eAED=0.08;_QI=182|1|1|1|1|1|9|215|494 |
| chr8_1 | exon | 14867384 | 14867837 | 14867384 | ID=Msa1180660-mRNA-1:exon:5480;Parent=Msa1180660-mRNA-1 |
| chr8_1 | exon | 14869055 | 14869202 | 14869055 | ID=Msa1180660-mRNA-1:exon:5481;Parent=Msa1180660-mRNA-1 |
| chr8_1 | exon | 14869335 | 14869517 | 14869335 | ID=Msa1180660-mRNA-1:exon:5482;Parent=Msa1180660-mRNA-1 |
| chr8_1 | exon | 14869612 | 14869686 | 14869612 | ID=Msa1180660-mRNA-1:exon:5483;Parent=Msa1180660-mRNA-1 |
| chr8_1 | exon | 14869806 | 14869961 | 14869806 | ID=Msa1180660-mRNA-1:exon:5484;Parent=Msa1180660-mRNA-1 |
| chr8_1 | exon | 14870049 | 14870147 | 14870049 | ID=Msa1180660-mRNA-1:exon:5485;Parent=Msa1180660-mRNA-1 |
| chr8_1 | exon | 14870232 | 14870362 | 14870232 | ID=Msa1180660-mRNA-1:exon:5486;Parent=Msa1180660-mRNA-1 |
| chr8_1 | exon | 14871038 | 14871119 | 14871038 | ID=Msa1180660-mRNA-1:exon:5487;Parent=Msa1180660-mRNA-1 |
| chr8_1 | exon | 14871278 | 14871831 | 14871278 | ID=Msa1180660-mRNA-1:exon:5488;Parent=Msa1180660-mRNA-1 |
| chr8_1 | five_prime_UTR | 14867384 | 14867565 | 14867384 | ID=Msa1180660-mRNA-1:five_prime_utr;Parent=Msa1180660-mRNA-1 |
| chr8_1 | CDS | 14867566 | 14867837 | 14867566 | ID=Msa1180660-mRNA-1:cds;Parent=Msa1180660-mRNA-1 |
| chr8_1 | CDS | 14869055 | 14869202 | 14869055 | ID=Msa1180660-mRNA-1:cds;Parent=Msa1180660-mRNA-1 |
| chr8_1 | CDS | 14869335 | 14869517 | 14869335 | ID=Msa1180660-mRNA-1:cds;Parent=Msa1180660-mRNA-1 |
| chr8_1 | CDS | 14869612 | 14869686 | 14869612 | ID=Msa1180660-mRNA-1:cds;Parent=Msa1180660-mRNA-1 |
| chr8_1 | CDS | 14869806 | 14869961 | 14869806 | ID=Msa1180660-mRNA-1:cds;Parent=Msa1180660-mRNA-1 |
| chr8_1 | CDS | 14870049 | 14870147 | 14870049 | ID=Msa1180660-mRNA-1:cds;Parent=Msa1180660-mRNA-1 |
| chr8_1 | CDS | 14870232 | 14870362 | 14870232 | ID=Msa1180660-mRNA-1:cds;Parent=Msa1180660-mRNA-1 |
| chr8_1 | CDS | 14871038 | 14871119 | 14871038 | ID=Msa1180660-mRNA-1:cds;Parent=Msa1180660-mRNA-1 |
| chr8_1 | CDS | 14871278 | 14871616 | 14871278 | ID=Msa1180660-mRNA-1:cds;Parent=Msa1180660-mRNA-1 |
| chr8_1 | three_prime_UTR | 14871617 | 14871831 | 14871617 | ID=Msa1180660-mRNA-1:three_prime_utr;Parent=Msa1180660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
