Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182150 | sp|Q9SRS9|CHIP_ARATH | 66.790 | 271 | 89 | 1 | 7 | 276 | 6 | 276 | 2.08e-132 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182150 | G7LEE6 | 98.556 | 277 | 4 | 0 | 1 | 277 | 1 | 277 | 0.0 | 572 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1182150 | Msa1230400 | 0.971822 | 9.001092e-134 | -8.615850e-47 |
| Msa1182150 | Msa1311270 | 0.890481 | 9.476259e-74 | -8.615850e-47 |
| Msa0541040 | Msa1182150 | 0.818240 | 2.173033e-52 | -8.615850e-47 |
| Msa0549590 | Msa1182150 | 0.812770 | 3.587139e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182150 | MtrunA17_Chr8g0338781 | 98.556 | 277 | 4 | 0 | 1 | 277 | 1 | 277 | 0.0 | 572 |
| Msa1182150 | MtrunA17_Chr8g0393041 | 36.000 | 100 | 64 | 0 | 9 | 108 | 477 | 576 | 4.68e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1182150 | AT3G07370.1 | 66.790 | 271 | 89 | 1 | 7 | 276 | 6 | 276 | 2.12e-133 | 379 |
| Msa1182150 | AT2G42810.3 | 35.000 | 100 | 65 | 0 | 6 | 105 | 8 | 107 | 1.02e-12 | 68.2 |
| Msa1182150 | AT2G42810.2 | 35.000 | 100 | 65 | 0 | 6 | 105 | 8 | 107 | 1.08e-12 | 68.2 |
| Msa1182150 | AT2G42810.1 | 35.000 | 100 | 65 | 0 | 6 | 105 | 8 | 107 | 1.11e-12 | 68.2 |
| Msa1182150 | AT2G42810.5 | 35.000 | 100 | 65 | 0 | 6 | 105 | 8 | 107 | 1.11e-12 | 68.2 |
| Msa1182150 | AT2G42810.4 | 35.000 | 100 | 65 | 0 | 6 | 105 | 8 | 107 | 1.11e-12 | 68.2 |
Find 93 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGAAATAAACGGGAACATT+AGG | 0.241807 | 8_1:+17163121 | None:intergenic |
| GGAAGCAGTCCATGAATATT+TGG | 0.256879 | 8_1:-17159550 | Msa1182150:CDS |
| GAATGTGAATTGTAGAAAAT+TGG | 0.260024 | 8_1:+17163458 | None:intergenic |
| ATGATTAAGGCTTTGGATCT+TGG | 0.294525 | 8_1:-17160402 | Msa1182150:intron |
| TAGTATCAAACTTGGCCATT+AGG | 0.302713 | 8_1:-17159572 | Msa1182150:CDS |
| GCTATATGGTTGAAGAAATA+TGG | 0.307159 | 8_1:-17160359 | Msa1182150:CDS |
| CATGTTTGTCCAAATATTCA+TGG | 0.335834 | 8_1:+17159541 | None:intergenic |
| TGTTTAAAGTCACAACATTA+AGG | 0.340045 | 8_1:+17159378 | None:intergenic |
| AGTATCAAACTTGGCCATTA+GGG | 0.343618 | 8_1:-17159571 | Msa1182150:CDS |
| AGAAAGGTAACAACGAGTTT+TGG | 0.354531 | 8_1:+17163517 | None:intergenic |
| TGATTAAGGCTTTGGATCTT+GGG | 0.370465 | 8_1:-17160401 | Msa1182150:intron |
| ATTCTACAGCATAGATGATC+TGG | 0.375119 | 8_1:+17159820 | None:intergenic |
| TGTCTCACCGCCGAAGCGTT+TGG | 0.375818 | 8_1:+17163335 | None:intergenic |
| TGCCAATCCAAAGGGCTATA+TGG | 0.378410 | 8_1:-17160373 | Msa1182150:CDS |
| AAACATATGAAGTGTACATA+TGG | 0.398153 | 8_1:-17159360 | Msa1182150:three_prime_UTR |
| AGGAAGGAACCACAGCAAAT+TGG | 0.398578 | 8_1:+17159225 | None:intergenic |
| TATCTAATGTTTATAACTAT+AGG | 0.399077 | 8_1:+17163382 | None:intergenic |
| GCTGGACAGTCATTCTGTTA+AGG | 0.400835 | 8_1:-17162825 | Msa1182150:intron |
| TGAAATAAACGGGAACATTA+GGG | 0.405625 | 8_1:+17163122 | None:intergenic |
| AGCACGATTGGTGAAATAAA+CGG | 0.411396 | 8_1:+17163111 | None:intergenic |
| TAGTGAATGGGAGAGGGTTG+AGG | 0.418045 | 8_1:-17162870 | Msa1182150:CDS |
| CAGCCTCCAACTGTTTCAAA+TGG | 0.427517 | 8_1:+17159984 | None:intergenic |
| TACTTCCCATTTGAAACAGT+TGG | 0.428647 | 8_1:-17159990 | Msa1182150:CDS |
| CTCTCATATGTATGTCCACT+TGG | 0.429519 | 8_1:+17159763 | None:intergenic |
| TTCATGGACTGCTTCCCTAA+TGG | 0.443363 | 8_1:+17159557 | None:intergenic |
| TCTTCAACCATATAGCCCTT+TGG | 0.445205 | 8_1:+17160366 | None:intergenic |
| CTGCAATTCCCATGATCGTT+GGG | 0.452825 | 8_1:+17160290 | None:intergenic |
| CATCGATGGCGGCATTAAAA+CGG | 0.453965 | 8_1:+17163267 | None:intergenic |
| GTTCATCGTCCCAACGATCA+TGG | 0.454029 | 8_1:-17160299 | Msa1182150:CDS |
| CTAAAAGAATTGTGGAAGAG+AGG | 0.456100 | 8_1:-17159204 | Msa1182150:three_prime_UTR |
| AAATAGAGAAGAAGAAGAAA+CGG | 0.461796 | 8_1:+17163481 | None:intergenic |
| GGAGATAAGATGAGAGATAG+AGG | 0.463250 | 8_1:+17159168 | None:intergenic |
| TTATTTGTAGTGAATGGGAG+AGG | 0.470473 | 8_1:-17162877 | Msa1182150:intron |
| TTTCAGGCACACTATATGTT+GGG | 0.471344 | 8_1:-17161807 | Msa1182150:intron |
| GCACGATTGGTGAAATAAAC+GGG | 0.471720 | 8_1:+17163112 | None:intergenic |
| TTGGTTTATTTGTAGTGAAT+GGG | 0.476814 | 8_1:-17162882 | Msa1182150:intron |
| AACCATATAGCCCTTTGGAT+TGG | 0.479080 | 8_1:+17160371 | None:intergenic |
| ATTTCAGGCACACTATATGT+TGG | 0.479123 | 8_1:-17161808 | Msa1182150:intron |
| AGCTTGTAAGTCTGCTCTAA+AGG | 0.479880 | 8_1:-17160062 | Msa1182150:CDS |
| GATGATGTGTTGTGCAAGAT+TGG | 0.481726 | 8_1:-17159427 | Msa1182150:three_prime_UTR |
| ATAAGATGAGAGATAGAGGT+AGG | 0.481736 | 8_1:+17159172 | None:intergenic |
| AGAAATGAGGCCAAACGCTT+CGG | 0.490570 | 8_1:-17163345 | Msa1182150:exon |
| TGTGTATACATTTAAGTGCC+TGG | 0.498036 | 8_1:-17159301 | Msa1182150:three_prime_UTR |
| ATCACATTACCTTCTGAAGA+TGG | 0.509877 | 8_1:+17159725 | None:intergenic |
| TTCCCATTTGAAACAGTTGG+AGG | 0.511106 | 8_1:-17159987 | Msa1182150:CDS |
| GTTCCTTCCTAAAAGAATTG+TGG | 0.514532 | 8_1:-17159212 | Msa1182150:three_prime_UTR |
| CATGAATATTTGGACAAACA+TGG | 0.516494 | 8_1:-17159540 | Msa1182150:CDS |
| GGAGATTATTATGTGAATGA+AGG | 0.522124 | 8_1:+17163409 | None:intergenic |
| ACCGTCGTTTCGCAAAAGCT+CGG | 0.522294 | 8_1:+17163310 | None:intergenic |
| TTCTAGAAGAGCAATTCAGC+TGG | 0.523922 | 8_1:-17162843 | Msa1182150:CDS |
| CGGAGAGTACCGATGAAGAA+AGG | 0.524164 | 8_1:+17163501 | None:intergenic |
| TCCTCAATTTGAATCATCAA+AGG | 0.524893 | 8_1:+17159147 | None:intergenic |
| AAGTTTGATACTAGTTGTGA+TGG | 0.528930 | 8_1:+17159582 | None:intergenic |
| AGCCTCCAACTGTTTCAAAT+GGG | 0.534587 | 8_1:+17159985 | None:intergenic |
| AAGGCTTTGGATCTTGGGAG+AGG | 0.536466 | 8_1:-17160396 | Msa1182150:CDS |
| TCGTTGTTACCTTTCTTCAT+CGG | 0.536813 | 8_1:-17163510 | Msa1182150:five_prime_UTR |
| TTCATCGTCCCAACGATCAT+GGG | 0.536937 | 8_1:-17160298 | Msa1182150:CDS |
| TTTATTTGACCAATTTGCTG+TGG | 0.538465 | 8_1:-17159234 | Msa1182150:three_prime_UTR |
| TATTTGTAGTGAATGGGAGA+GGG | 0.542095 | 8_1:-17162876 | Msa1182150:intron |
| TCAAGTGGTTCCCTCGTGAT+CGG | 0.543910 | 8_1:+17159606 | None:intergenic |
| GGAAATTTGCAGTTTGTGAG+AGG | 0.545645 | 8_1:-17159481 | Msa1182150:three_prime_UTR |
| GAGATGACACAAAGCACGAT+TGG | 0.550613 | 8_1:+17163099 | None:intergenic |
| TTTCTTGGCTCTGACATGGA+AGG | 0.550712 | 8_1:-17160031 | Msa1182150:CDS |
| TGTCCACTTGGAGTAATGAC+AGG | 0.556001 | 8_1:+17159775 | None:intergenic |
| GGGAGAGGTGCCAATCCAAA+GGG | 0.557516 | 8_1:-17160381 | Msa1182150:CDS |
| TCTGCAATTCCCATGATCGT+TGG | 0.558743 | 8_1:+17160289 | None:intergenic |
| TAAAAGAATTGTGGAAGAGA+GGG | 0.558914 | 8_1:-17159203 | Msa1182150:three_prime_UTR |
| AGGAATCCGAGAATTGCAAA+AGG | 0.563665 | 8_1:-17161751 | Msa1182150:intron |
| GTGAATTTGATCCGATCACG+AGG | 0.565580 | 8_1:-17159617 | Msa1182150:CDS |
| TGGGAGAGGTGCCAATCCAA+AGG | 0.568375 | 8_1:-17160382 | Msa1182150:CDS |
| ATGTTTATAACTATAGGAAA+CGG | 0.568589 | 8_1:+17163388 | None:intergenic |
| CAAAGGCAAAATACAAGGAG+TGG | 0.570372 | 8_1:-17160326 | Msa1182150:CDS |
| TTCTACAGCATAGATGATCT+GGG | 0.571200 | 8_1:+17159821 | None:intergenic |
| AGATTAACAGAATATTAAGC+TGG | 0.571582 | 8_1:-17159502 | Msa1182150:exon |
| GTTTGCAAAGGCAAAATACA+AGG | 0.573081 | 8_1:-17160331 | Msa1182150:CDS |
| AACCTCAGTGTAAGCATCGA+TGG | 0.574559 | 8_1:+17163253 | None:intergenic |
| ATCACAACTAGTATCAAACT+TGG | 0.576212 | 8_1:-17159580 | Msa1182150:CDS |
| ATGAATATTTGGACAAACAT+GGG | 0.585563 | 8_1:-17159539 | Msa1182150:CDS |
| ATATTTGGACAAACATGGGT+GGG | 0.588555 | 8_1:-17159535 | Msa1182150:CDS |
| GATTCTTGACCATCTTCAGA+AGG | 0.598500 | 8_1:-17159734 | Msa1182150:intron |
| AGACACATACAGACCTCAGT+TGG | 0.598626 | 8_1:+17159923 | None:intergenic |
| AAAGGCAAAATACAAGGAGT+GGG | 0.618207 | 8_1:-17160325 | Msa1182150:CDS |
| AATGAGGCCAAACGCTTCGG+CGG | 0.621498 | 8_1:-17163342 | Msa1182150:CDS |
| ATGAAATGTTAAGTTTCACC+AGG | 0.625530 | 8_1:+17159283 | None:intergenic |
| CAGAAACAAGAACATACGAA+AGG | 0.633885 | 8_1:-17161771 | Msa1182150:CDS |
| GATCCTGTCATTACTCCAAG+TGG | 0.647756 | 8_1:-17159778 | Msa1182150:CDS |
| AATATTTGGACAAACATGGG+TGG | 0.650582 | 8_1:-17159536 | Msa1182150:CDS |
| ACTAGTTGTGATGGATCAAG+TGG | 0.661529 | 8_1:+17159591 | None:intergenic |
| CTCAGTGTAAGCATCGATGG+CGG | 0.679330 | 8_1:+17163256 | None:intergenic |
| CGCCATCGATGCTTACACTG+AGG | 0.684093 | 8_1:-17163255 | Msa1182150:intron |
| AATATGGCAAGAGTTTGCAA+AGG | 0.692026 | 8_1:-17160343 | Msa1182150:CDS |
| TGAATTTGATCCGATCACGA+GGG | 0.713022 | 8_1:-17159616 | Msa1182150:CDS |
| AGATGATGACATACCAACTG+AGG | 0.723021 | 8_1:-17159936 | Msa1182150:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATTTGATTTGAAATT+TGG | - | chr8_1:17159691-17159710 | Msa1182150:intron | 10.0% |
| !!! | TTTAATTTGATTTGAAATTT+GGG | - | chr8_1:17159692-17159711 | Msa1182150:intron | 10.0% |
| !!! | TATTTGATTATTTTGTAAAA+TGG | - | chr8_1:17160814-17160833 | Msa1182150:intron | 10.0% |
| !! | AATAATGAAATACTATTTAT+AGG | - | chr8_1:17161503-17161522 | Msa1182150:intron | 10.0% |
| !! | TGACATTAAAATTTAAATAA+TGG | + | chr8_1:17162180-17162199 | None:intergenic | 10.0% |
| !! | ATAGTTAATAATAAATACAA+TGG | + | chr8_1:17162515-17162534 | None:intergenic | 10.0% |
| !! | TATCTAATGTTTATAACTAT+AGG | + | chr8_1:17159325-17159344 | None:intergenic | 15.0% |
| !!! | TATGAAATTTGTGAATTTTT+TGG | - | chr8_1:17159647-17159666 | Msa1182150:intron | 15.0% |
| !!! | ATGAAATTTGTGAATTTTTT+GGG | - | chr8_1:17159648-17159667 | Msa1182150:intron | 15.0% |
| !! | TACAATATTAGCAAAATTAT+AGG | - | chr8_1:17161589-17161608 | Msa1182150:intron | 15.0% |
| !! | ATTATTCATTTGAAAAATGA+GGG | + | chr8_1:17162263-17162282 | None:intergenic | 15.0% |
| !!! | AATAATGATTCTTTTGTTTT+TGG | - | chr8_1:17162277-17162296 | Msa1182150:intron | 15.0% |
| !! | ATGTTTATAACTATAGGAAA+CGG | + | chr8_1:17159319-17159338 | None:intergenic | 20.0% |
| !! | GTAAGTAAATATGGAAAATT+TGG | + | chr8_1:17159481-17159500 | None:intergenic | 20.0% |
| !!! | TTTTGCAATTGAAAACAAAA+GGG | + | chr8_1:17159503-17159522 | None:intergenic | 20.0% |
| !!! | TTTTTGCAATTGAAAACAAA+AGG | + | chr8_1:17159504-17159523 | None:intergenic | 20.0% |
| !! | TTCTTAAATTTATTTATGCG+TGG | - | chr8_1:17160214-17160233 | Msa1182150:intron | 20.0% |
| !! | TCTTAAATTTATTTATGCGT+GGG | - | chr8_1:17160215-17160234 | Msa1182150:intron | 20.0% |
| !! | TTGATATATCAATTGTTTGT+TGG | - | chr8_1:17160761-17160780 | Msa1182150:intron | 20.0% |
| !! | ATCAAATATAAGATGTAATG+AGG | + | chr8_1:17160802-17160821 | None:intergenic | 20.0% |
| !! | TGATATATTAAAACTGTCAT+TGG | - | chr8_1:17161305-17161324 | Msa1182150:intron | 20.0% |
| !! | GATATATTAAAACTGTCATT+GGG | - | chr8_1:17161306-17161325 | Msa1182150:intron | 20.0% |
| !! | AAAACATCGTCATAAATTAA+AGG | - | chr8_1:17161353-17161372 | Msa1182150:intron | 20.0% |
| !! | AAACATCGTCATAAATTAAA+GGG | - | chr8_1:17161354-17161373 | Msa1182150:intron | 20.0% |
| !! | GAATATATATGTACATTGTA+AGG | - | chr8_1:17161450-17161469 | Msa1182150:intron | 20.0% |
| !! | ATTATTTGAGTCATGATTTA+CGG | + | chr8_1:17161489-17161508 | None:intergenic | 20.0% |
| !! | TTAGCAAAATTATAGGATAT+TGG | - | chr8_1:17161596-17161615 | Msa1182150:intron | 20.0% |
| !! | AAAATTATAGGATATTGGTA+GGG | - | chr8_1:17161601-17161620 | Msa1182150:intron | 20.0% |
| !!! | CCTATTTAGAATTACAAAAT+AGG | + | chr8_1:17161720-17161739 | None:intergenic | 20.0% |
| !!! | CCTATTTTGTAATTCTAAAT+AGG | - | chr8_1:17161717-17161736 | Msa1182150:intron | 20.0% |
| !! | CATTATTCATTTGAAAAATG+AGG | + | chr8_1:17162264-17162283 | None:intergenic | 20.0% |
| ! | AAATAGAGAAGAAGAAGAAA+CGG | + | chr8_1:17159226-17159245 | None:intergenic | 25.0% |
| ! | GAATGTGAATTGTAGAAAAT+TGG | + | chr8_1:17159249-17159268 | None:intergenic | 25.0% |
| ! | AACAAAAGGGTAAGTAAATA+TGG | + | chr8_1:17159490-17159509 | None:intergenic | 25.0% |
| ! | TATGTATGCAATTGAAATTG+TGG | - | chr8_1:17159744-17159763 | Msa1182150:CDS | 25.0% |
| !! | TTTGGTTTATTTGTAGTGAA+TGG | - | chr8_1:17159821-17159840 | Msa1182150:CDS | 25.0% |
| ! | TTGGTTTATTTGTAGTGAAT+GGG | - | chr8_1:17159822-17159841 | Msa1182150:CDS | 25.0% |
| ! | CTTAAATTTATTTATGCGTG+GGG | - | chr8_1:17160216-17160235 | Msa1182150:intron | 25.0% |
| ! | TCAAGAATCTATTAACATCA+AGG | + | chr8_1:17160251-17160270 | None:intergenic | 25.0% |
| ! | GATCAGAATTCTTAAAATTG+TGG | + | chr8_1:17160309-17160328 | None:intergenic | 25.0% |
| !! | TATTTGATAATTGAGTTGCA+AGG | + | chr8_1:17160372-17160391 | None:intergenic | 25.0% |
| ! | AATCTTACGTAAAGAAAACA+TGG | + | chr8_1:17160411-17160430 | None:intergenic | 25.0% |
| ! | TTCTTTACGTAAGATTTAGT+TGG | - | chr8_1:17160415-17160434 | Msa1182150:intron | 25.0% |
| ! | AAGAGAATAATATTAAGTCG+AGG | + | chr8_1:17160573-17160592 | None:intergenic | 25.0% |
| ! | TCTAAACCAAACAAAACTTT+GGG | - | chr8_1:17160647-17160666 | Msa1182150:intron | 25.0% |
| ! | AAAACAAGACATACATATCT+TGG | + | chr8_1:17160692-17160711 | None:intergenic | 25.0% |
| ! | TTACTTGTTTAAGTGTTAAC+TGG | - | chr8_1:17161077-17161096 | Msa1182150:intron | 25.0% |
| ! | ACAAAGTTGTAAAATACAGA+AGG | + | chr8_1:17161136-17161155 | None:intergenic | 25.0% |
| ! | CAAAATTATAGGATATTGGT+AGG | - | chr8_1:17161600-17161619 | Msa1182150:intron | 25.0% |
| ! | TATTTGATGAACAAAAGCTA+AGG | - | chr8_1:17161932-17161951 | Msa1182150:intron | 25.0% |
| !!! | AACAGTTTGTTTGAGAATTT+TGG | - | chr8_1:17162120-17162139 | Msa1182150:intron | 25.0% |
| !!! | TTTGTTTTTGGTCATGATTA+AGG | - | chr8_1:17162289-17162308 | Msa1182150:intron | 25.0% |
| ! | ACATAAAAATAGTTGAGATG+TGG | + | chr8_1:17162553-17162572 | None:intergenic | 25.0% |
| !!! | CATCTCAACTATTTTTATGT+TGG | - | chr8_1:17162553-17162572 | Msa1182150:intron | 25.0% |
| !! | CTAAAGGAAAAACATTTTCT+TGG | - | chr8_1:17162658-17162677 | Msa1182150:intron | 25.0% |
| ! | ATAGATTCGAGAAATAAGTA+AGG | - | chr8_1:17162818-17162837 | Msa1182150:intron | 25.0% |
| ! | TATTTATTAGTCACCCAAAT+TGG | - | chr8_1:17162842-17162861 | Msa1182150:CDS | 25.0% |
| ! | TAAATTCAACAAGCCAATTT+GGG | + | chr8_1:17162858-17162877 | None:intergenic | 25.0% |
| !! | GATTTTCATGTTTCATATTC+TGG | - | chr8_1:17162999-17163018 | Msa1182150:intron | 25.0% |
| ! | ATGAATATTTGGACAAACAT+GGG | - | chr8_1:17163165-17163184 | Msa1182150:intron | 25.0% |
| ! | AGATTAACAGAATATTAAGC+TGG | - | chr8_1:17163202-17163221 | Msa1182150:intron | 25.0% |
| !! | TGTTTAAAGTCACAACATTA+AGG | + | chr8_1:17163329-17163348 | None:intergenic | 25.0% |
| ! | AAACATATGAAGTGTACATA+TGG | - | chr8_1:17163344-17163363 | Msa1182150:CDS | 25.0% |
| GGAGATTATTATGTGAATGA+AGG | + | chr8_1:17159298-17159317 | None:intergenic | 30.0% | |
| !!! | ACATGGGTTTTTTGTTTTGT+AGG | - | chr8_1:17159546-17159565 | Msa1182150:CDS | 30.0% |
| TGAAATAAACGGGAACATTA+GGG | + | chr8_1:17159585-17159604 | None:intergenic | 30.0% | |
| !! | TTGGGTGTTTTTGATTGTTT+AGG | - | chr8_1:17159666-17159685 | Msa1182150:intron | 30.0% |
| !! | TGGGTGTTTTTGATTGTTTA+GGG | - | chr8_1:17159667-17159686 | Msa1182150:intron | 30.0% |
| !! | TTGATTTGAAATTTGGGTTG+TGG | - | chr8_1:17159698-17159717 | Msa1182150:intron | 30.0% |
| !! | TGATTTGAAATTTGGGTTGT+GGG | - | chr8_1:17159699-17159718 | Msa1182150:intron | 30.0% |
| TATGCAATTGAAATTGTGGT+TGG | - | chr8_1:17159748-17159767 | Msa1182150:CDS | 30.0% | |
| ! | TGGTTGGAATATTGAGATTT+TGG | - | chr8_1:17159764-17159783 | Msa1182150:CDS | 30.0% |
| ! | TTGGAATATTGAGATTTTGG+AGG | - | chr8_1:17159767-17159786 | Msa1182150:CDS | 30.0% |
| CAAATAAACCAAACACATTG+TGG | + | chr8_1:17159814-17159833 | None:intergenic | 30.0% | |
| GATTTAATGGCTTCATTCAT+CGG | - | chr8_1:17159960-17159979 | Msa1182150:CDS | 30.0% | |
| ACGAGAGCAATATTTATGAT+AGG | + | chr8_1:17160171-17160190 | None:intergenic | 30.0% | |
| TTCTATTGGAAAGGATCATT+TGG | - | chr8_1:17160283-17160302 | Msa1182150:CDS | 30.0% | |
| CGTAAAGAAAACATGGAAAT+AGG | + | chr8_1:17160404-17160423 | None:intergenic | 30.0% | |
| GTCTAAACCAAACAAAACTT+TGG | - | chr8_1:17160646-17160665 | Msa1182150:intron | 30.0% | |
| CTAAACCAAACAAAACTTTG+GGG | - | chr8_1:17160648-17160667 | Msa1182150:intron | 30.0% | |
| TAAACCAAACAAAACTTTGG+GGG | - | chr8_1:17160649-17160668 | Msa1182150:intron | 30.0% | |
| !!! | GTCTTGTTTTGAGTTAGTTT+TGG | - | chr8_1:17160702-17160721 | Msa1182150:intron | 30.0% |
| ! | TCTTCTTTTGCACATATTTC+AGG | - | chr8_1:17160881-17160900 | Msa1182150:intron | 30.0% |
| ! | AACAAACCTTTTGCAATTCT+CGG | + | chr8_1:17160962-17160981 | None:intergenic | 30.0% |
| !! | ATTTACACTGTTTCTGATCT+AGG | - | chr8_1:17161271-17161290 | Msa1182150:intron | 30.0% |
| ATCGTCATAAATTAAAGGGT+GGG | - | chr8_1:17161358-17161377 | Msa1182150:intron | 30.0% | |
| ATAAATTAAAGGGTGGGAAT+TGG | - | chr8_1:17161364-17161383 | Msa1182150:intron | 30.0% | |
| TAAATTAAAGGGTGGGAATT+GGG | - | chr8_1:17161365-17161384 | Msa1182150:intron | 30.0% | |
| GAATGAAGAAAAGATAGGAA+GGG | - | chr8_1:17161623-17161642 | Msa1182150:intron | 30.0% | |
| CATATCAATCCGATATTACT+GGG | + | chr8_1:17161653-17161672 | None:intergenic | 30.0% | |
| GTTATACATAATACCAACTG+AGG | - | chr8_1:17161690-17161709 | Msa1182150:intron | 30.0% | |
| ATTTCGTGTGGAAGAATAAA+GGG | + | chr8_1:17161816-17161835 | None:intergenic | 30.0% | |
| ! | GTTTGAAATTTCATTTCGTG+TGG | + | chr8_1:17161828-17161847 | None:intergenic | 30.0% |
| !!! | CAAAGCTTTTGGCTTAAAAT+TGG | + | chr8_1:17161850-17161869 | None:intergenic | 30.0% |
| GAATTAGAGAGATAAAGAGA+TGG | + | chr8_1:17161896-17161915 | None:intergenic | 30.0% | |
| AATTCCTAATATTGCTTGCT+TGG | - | chr8_1:17162005-17162024 | Msa1182150:intron | 30.0% | |
| ATTCCTAATATTGCTTGCTT+GGG | - | chr8_1:17162006-17162025 | Msa1182150:intron | 30.0% | |
| TCATTTGAAAAATGAGGGTA+AGG | + | chr8_1:17162258-17162277 | None:intergenic | 30.0% | |
| GCTATATGGTTGAAGAAATA+TGG | - | chr8_1:17162345-17162364 | Msa1182150:intron | 30.0% | |
| GTAAATTCAACAAGCCAATT+TGG | + | chr8_1:17162859-17162878 | None:intergenic | 30.0% | |
| !! | AATTGGCTTGTTGAATTTAC+AGG | - | chr8_1:17162859-17162878 | Msa1182150:CDS | 30.0% |
| CATTTAACTACTCCTTTCTT+AGG | - | chr8_1:17163061-17163080 | Msa1182150:intron | 30.0% | |
| AAGTTTGATACTAGTTGTGA+TGG | + | chr8_1:17163125-17163144 | None:intergenic | 30.0% | |
| ATCACAACTAGTATCAAACT+TGG | - | chr8_1:17163124-17163143 | Msa1182150:CDS | 30.0% | |
| CATGTTTGTCCAAATATTCA+TGG | + | chr8_1:17163166-17163185 | None:intergenic | 30.0% | |
| CATGAATATTTGGACAAACA+TGG | - | chr8_1:17163164-17163183 | Msa1182150:intron | 30.0% | |
| ATGAAATGTTAAGTTTCACC+AGG | + | chr8_1:17163424-17163443 | None:intergenic | 30.0% | |
| !! | TTTATTTGACCAATTTGCTG+TGG | - | chr8_1:17163470-17163489 | Msa1182150:five_prime_UTR | 30.0% |
| TAAAAGAATTGTGGAAGAGA+GGG | - | chr8_1:17163501-17163520 | Msa1182150:five_prime_UTR | 30.0% | |
| ! | AGAAAGGTAACAACGAGTTT+TGG | + | chr8_1:17159190-17159209 | None:intergenic | 35.0% |
| TCGTTGTTACCTTTCTTCAT+CGG | - | chr8_1:17159194-17159213 | Msa1182150:three_prime_UTR | 35.0% | |
| AGCGAAGAAAAACAGAAATG+AGG | - | chr8_1:17159346-17159365 | Msa1182150:three_prime_UTR | 35.0% | |
| ACTTTGTAACGTTTCTGACA+TGG | - | chr8_1:17159529-17159548 | Msa1182150:CDS | 35.0% | |
| CTTTGTAACGTTTCTGACAT+GGG | - | chr8_1:17159530-17159549 | Msa1182150:CDS | 35.0% | |
| GTGAAATAAACGGGAACATT+AGG | + | chr8_1:17159586-17159605 | None:intergenic | 35.0% | |
| AGCACGATTGGTGAAATAAA+CGG | + | chr8_1:17159596-17159615 | None:intergenic | 35.0% | |
| !!! | ATTTGGGTTGTGGGTTTTTT+AGG | - | chr8_1:17159708-17159727 | Msa1182150:intron | 35.0% |
| !!! | TTTGGGTTGTGGGTTTTTTA+GGG | - | chr8_1:17159709-17159728 | Msa1182150:intron | 35.0% |
| AATTGTGTCCACAATGTGTT+TGG | - | chr8_1:17159803-17159822 | Msa1182150:CDS | 35.0% | |
| TTATTTGTAGTGAATGGGAG+AGG | - | chr8_1:17159827-17159846 | Msa1182150:intron | 35.0% | |
| TATTTGTAGTGAATGGGAGA+GGG | - | chr8_1:17159828-17159847 | Msa1182150:intron | 35.0% | |
| ! | CGTGCATTTTCACGAATAAA+GGG | + | chr8_1:17160061-17160080 | None:intergenic | 35.0% |
| AATCCACGTGACTTTACATT+CGG | - | chr8_1:17160107-17160126 | Msa1182150:intron | 35.0% | |
| GATTAGGCGTAAAACAGATT+GGG | - | chr8_1:17160129-17160148 | Msa1182150:intron | 35.0% | |
| ! | GTTGAGTAGTTCTATTGGAA+AGG | - | chr8_1:17160274-17160293 | Msa1182150:intron | 35.0% |
| ! | GTAAGATTTAGTTGGTTCCT+GGG | - | chr8_1:17160423-17160442 | Msa1182150:intron | 35.0% |
| GAGAGGTTTATAGCAAACAT+AGG | + | chr8_1:17160513-17160532 | None:intergenic | 35.0% | |
| ATATTAAGTCGAGGTTTCCA+CGG | + | chr8_1:17160564-17160583 | None:intergenic | 35.0% | |
| ATTTCAGGCACACTATATGT+TGG | - | chr8_1:17160896-17160915 | Msa1182150:intron | 35.0% | |
| TTTCAGGCACACTATATGTT+GGG | - | chr8_1:17160897-17160916 | Msa1182150:intron | 35.0% | |
| CAGAAACAAGAACATACGAA+AGG | - | chr8_1:17160933-17160952 | Msa1182150:intron | 35.0% | |
| AGAAGGTCACAAACAGAAAA+GGG | + | chr8_1:17161119-17161138 | None:intergenic | 35.0% | |
| TGTCCTGCAACATTTATCAA+TGG | + | chr8_1:17161160-17161179 | None:intergenic | 35.0% | |
| CATCGTCATAAATTAAAGGG+TGG | - | chr8_1:17161357-17161376 | Msa1182150:intron | 35.0% | |
| GTAGGGAATGAAGAAAAGAT+AGG | - | chr8_1:17161618-17161637 | Msa1182150:intron | 35.0% | |
| GGAATGAAGAAAAGATAGGA+AGG | - | chr8_1:17161622-17161641 | Msa1182150:intron | 35.0% | |
| CCATATCAATCCGATATTAC+TGG | + | chr8_1:17161654-17161673 | None:intergenic | 35.0% | |
| CCAGTAATATCGGATTGATA+TGG | - | chr8_1:17161651-17161670 | Msa1182150:intron | 35.0% | |
| AATATCGGATTGATATGGTG+TGG | - | chr8_1:17161656-17161675 | Msa1182150:intron | 35.0% | |
| GTGTATGAATTATTGGGCTA+GGG | + | chr8_1:17161774-17161793 | None:intergenic | 35.0% | |
| AGTGTATGAATTATTGGGCT+AGG | + | chr8_1:17161775-17161794 | None:intergenic | 35.0% | |
| AGCCCAATAATTCATACACT+CGG | - | chr8_1:17161775-17161794 | Msa1182150:CDS | 35.0% | |
| TGCCGAGTGTATGAATTATT+GGG | + | chr8_1:17161780-17161799 | None:intergenic | 35.0% | |
| TGGAAGAATAAAGGGGATTA+GGG | + | chr8_1:17161808-17161827 | None:intergenic | 35.0% | |
| TTTCGTGTGGAAGAATAAAG+GGG | + | chr8_1:17161815-17161834 | None:intergenic | 35.0% | |
| CATTTCGTGTGGAAGAATAA+AGG | + | chr8_1:17161817-17161836 | None:intergenic | 35.0% | |
| CATCCATGTATATTACGTGA+AGG | - | chr8_1:17161958-17161977 | Msa1182150:intron | 35.0% | |
| CATCCTTCACGTAATATACA+TGG | + | chr8_1:17161964-17161983 | None:intergenic | 35.0% | |
| CATGTATATTACGTGAAGGA+TGG | - | chr8_1:17161962-17161981 | Msa1182150:intron | 35.0% | |
| ATATTACGTGAAGGATGGTT+TGG | - | chr8_1:17161967-17161986 | Msa1182150:intron | 35.0% | |
| TTTGGTCATGATTAAGGCTT+TGG | - | chr8_1:17162295-17162314 | Msa1182150:intron | 35.0% | |
| !! | ATGATTAAGGCTTTGGATCT+TGG | - | chr8_1:17162302-17162321 | Msa1182150:intron | 35.0% |
| !! | TGATTAAGGCTTTGGATCTT+GGG | - | chr8_1:17162303-17162322 | Msa1182150:intron | 35.0% |
| AATATGGCAAGAGTTTGCAA+AGG | - | chr8_1:17162361-17162380 | Msa1182150:intron | 35.0% | |
| GTTTGCAAAGGCAAAATACA+AGG | - | chr8_1:17162373-17162392 | Msa1182150:intron | 35.0% | |
| AAAGGCAAAATACAAGGAGT+GGG | - | chr8_1:17162379-17162398 | Msa1182150:intron | 35.0% | |
| AAAAATAGTTGAGATGTGGC+TGG | + | chr8_1:17162549-17162568 | None:intergenic | 35.0% | |
| ! | TACTTCCCATTTGAAACAGT+TGG | - | chr8_1:17162714-17162733 | Msa1182150:intron | 35.0% |
| TTCTACAGCATAGATGATCT+GGG | + | chr8_1:17162886-17162905 | None:intergenic | 35.0% | |
| ATTCTACAGCATAGATGATC+TGG | + | chr8_1:17162887-17162906 | None:intergenic | 35.0% | |
| ! | ATCACATTACCTTCTGAAGA+TGG | + | chr8_1:17162982-17163001 | None:intergenic | 35.0% |
| !! | ATGTTTTTCGATATCGATCG+AGG | - | chr8_1:17163027-17163046 | Msa1182150:intron | 35.0% |
| TAACTACTCCTTTCTTAGGT+TGG | - | chr8_1:17163065-17163084 | Msa1182150:intron | 35.0% | |
| CAAATTCACCAACCTAAGAA+AGG | + | chr8_1:17163076-17163095 | None:intergenic | 35.0% | |
| TAGTATCAAACTTGGCCATT+AGG | - | chr8_1:17163132-17163151 | Msa1182150:CDS | 35.0% | |
| AGTATCAAACTTGGCCATTA+GGG | - | chr8_1:17163133-17163152 | Msa1182150:CDS | 35.0% | |
| AATATTTGGACAAACATGGG+TGG | - | chr8_1:17163168-17163187 | Msa1182150:intron | 35.0% | |
| ATATTTGGACAAACATGGGT+GGG | - | chr8_1:17163169-17163188 | Msa1182150:intron | 35.0% | |
| TGTGTATACATTTAAGTGCC+TGG | - | chr8_1:17163403-17163422 | Msa1182150:five_prime_UTR | 35.0% | |
| GTTCCTTCCTAAAAGAATTG+TGG | - | chr8_1:17163492-17163511 | Msa1182150:five_prime_UTR | 35.0% | |
| !! | CTTCCACAATTCTTTTAGGA+AGG | + | chr8_1:17163498-17163517 | None:intergenic | 35.0% |
| ! | CTCTCTTCCACAATTCTTTT+AGG | + | chr8_1:17163502-17163521 | None:intergenic | 35.0% |
| CTAAAAGAATTGTGGAAGAG+AGG | - | chr8_1:17163500-17163519 | Msa1182150:five_prime_UTR | 35.0% | |
| ATAAGATGAGAGATAGAGGT+AGG | + | chr8_1:17163535-17163554 | None:intergenic | 35.0% | |
| GCACGATTGGTGAAATAAAC+GGG | + | chr8_1:17159595-17159614 | None:intergenic | 40.0% | |
| ! | TTCTAGAAGAGCAATTCAGC+TGG | - | chr8_1:17159861-17159880 | Msa1182150:intron | 40.0% |
| ! | GCGTGCATTTTCACGAATAA+AGG | + | chr8_1:17160062-17160081 | None:intergenic | 40.0% |
| AATCCGAATGTAAAGTCACG+TGG | + | chr8_1:17160113-17160132 | None:intergenic | 40.0% | |
| CGTGACTTTACATTCGGATT+AGG | - | chr8_1:17160113-17160132 | Msa1182150:intron | 40.0% | |
| GGATTAGGCGTAAAACAGAT+TGG | - | chr8_1:17160128-17160147 | Msa1182150:intron | 40.0% | |
| GCGTAAAACAGATTGGGTAT+TGG | - | chr8_1:17160135-17160154 | Msa1182150:intron | 40.0% | |
| ! | GAGACGTTGAGTAGTTCTAT+TGG | - | chr8_1:17160269-17160288 | Msa1182150:intron | 40.0% |
| ! | CGTAAGATTTAGTTGGTTCC+TGG | - | chr8_1:17160422-17160441 | Msa1182150:intron | 40.0% |
| AAACCTCTCAGATGATGTAC+AGG | - | chr8_1:17160524-17160543 | Msa1182150:intron | 40.0% | |
| !!! | AGATCCCCCAAAGTTTTGTT+TGG | + | chr8_1:17160656-17160675 | None:intergenic | 40.0% |
| TGTGCAAAAGAAGATTCAGC+TGG | + | chr8_1:17160875-17160894 | None:intergenic | 40.0% | |
| AGGAATCCGAGAATTGCAAA+AGG | - | chr8_1:17160953-17160972 | Msa1182150:intron | 40.0% | |
| AAACACCCTTGTCTGTTTCA+TGG | - | chr8_1:17160988-17161007 | Msa1182150:intron | 40.0% | |
| GATGTCCATGAAACAGACAA+GGG | + | chr8_1:17160996-17161015 | None:intergenic | 40.0% | |
| TGATGTCCATGAAACAGACA+AGG | + | chr8_1:17160997-17161016 | None:intergenic | 40.0% | |
| CAGAAGGTCACAAACAGAAA+AGG | + | chr8_1:17161120-17161139 | None:intergenic | 40.0% | |
| ! | GTGCCATTGATAAATGTTGC+AGG | - | chr8_1:17161154-17161173 | Msa1182150:intron | 40.0% |
| ! | GGAAGGAAGCATAAAATGTG+GGG | + | chr8_1:17161220-17161239 | None:intergenic | 40.0% |
| ! | GGGAAGGAAGCATAAAATGT+GGG | + | chr8_1:17161221-17161240 | None:intergenic | 40.0% |
| ! | ATTTTATGCTTCCTTCCCCT+GGG | - | chr8_1:17161223-17161242 | Msa1182150:intron | 40.0% |
| ATAAACCACATCCAATCCCA+GGG | + | chr8_1:17161242-17161261 | None:intergenic | 40.0% | |
| AATAAACCACATCCAATCCC+AGG | + | chr8_1:17161243-17161262 | None:intergenic | 40.0% | |
| CATGTAGCAAATGATGCAAC+AGG | + | chr8_1:17161558-17161577 | None:intergenic | 40.0% | |
| AAGGGACATCCCAGTAATAT+CGG | - | chr8_1:17161641-17161660 | Msa1182150:intron | 40.0% | |
| GATTGATATGGTGTGGTGAA+TGG | - | chr8_1:17161663-17161682 | Msa1182150:intron | 40.0% | |
| CAAAATAGGTCATCCTCAGT+TGG | + | chr8_1:17161706-17161725 | None:intergenic | 40.0% | |
| CTGCCGAGTGTATGAATTAT+TGG | + | chr8_1:17161781-17161800 | None:intergenic | 40.0% | |
| GGAAGAATAAAGGGGATTAG+GGG | + | chr8_1:17161807-17161826 | None:intergenic | 40.0% | |
| GTGGAAGAATAAAGGGGATT+AGG | + | chr8_1:17161809-17161828 | None:intergenic | 40.0% | |
| TAAGCCAAAAGCTTTGCCTT+AGG | - | chr8_1:17161854-17161873 | Msa1182150:intron | 40.0% | |
| AAGCCAAAAGCTTTGCCTTA+GGG | - | chr8_1:17161855-17161874 | Msa1182150:intron | 40.0% | |
| GAACCCAAGCAAGCAATATT+AGG | + | chr8_1:17162012-17162031 | None:intergenic | 40.0% | |
| !!! | ATTCCTGCTGATTTTCAGTG+TGG | - | chr8_1:17162218-17162237 | Msa1182150:intron | 40.0% |
| AACCATATAGCCCTTTGGAT+TGG | + | chr8_1:17162336-17162355 | None:intergenic | 40.0% | |
| TCTTCAACCATATAGCCCTT+TGG | + | chr8_1:17162341-17162360 | None:intergenic | 40.0% | |
| CAAAGGCAAAATACAAGGAG+TGG | - | chr8_1:17162378-17162397 | Msa1182150:intron | 40.0% | |
| AGCTTGTAAGTCTGCTCTAA+AGG | - | chr8_1:17162642-17162661 | Msa1182150:intron | 40.0% | |
| !!! | ACATTTTCTTGGCTCTGACA+TGG | - | chr8_1:17162669-17162688 | Msa1182150:intron | 40.0% |
| ! | TTCCCATTTGAAACAGTTGG+AGG | - | chr8_1:17162717-17162736 | Msa1182150:intron | 40.0% |
| AGCCTCCAACTGTTTCAAAT+GGG | + | chr8_1:17162722-17162741 | None:intergenic | 40.0% | |
| AGATGATGACATACCAACTG+AGG | - | chr8_1:17162768-17162787 | Msa1182150:intron | 40.0% | |
| CTCTCATATGTATGTCCACT+TGG | + | chr8_1:17162944-17162963 | None:intergenic | 40.0% | |
| GATTCTTGACCATCTTCAGA+AGG | - | chr8_1:17162970-17162989 | Msa1182150:intron | 40.0% | |
| TGAATTTGATCCGATCACGA+GGG | - | chr8_1:17163088-17163107 | Msa1182150:intron | 40.0% | |
| !! | ACTAGTTGTGATGGATCAAG+TGG | + | chr8_1:17163116-17163135 | None:intergenic | 40.0% |
| GGAAGCAGTCCATGAATATT+TGG | - | chr8_1:17163154-17163173 | Msa1182150:intron | 40.0% | |
| GGAAATTTGCAGTTTGTGAG+AGG | - | chr8_1:17163223-17163242 | Msa1182150:intron | 40.0% | |
| GATGATGTGTTGTGCAAGAT+TGG | - | chr8_1:17163277-17163296 | Msa1182150:CDS | 40.0% | |
| GGAGATAAGATGAGAGATAG+AGG | + | chr8_1:17163539-17163558 | None:intergenic | 40.0% | |
| AGAAATGAGGCCAAACGCTT+CGG | - | chr8_1:17159359-17159378 | Msa1182150:three_prime_UTR | 45.0% | |
| ! | CATCGATGGCGGCATTAAAA+CGG | + | chr8_1:17159440-17159459 | None:intergenic | 45.0% |
| !! | AACCTCAGTGTAAGCATCGA+TGG | + | chr8_1:17159454-17159473 | None:intergenic | 45.0% |
| GAGATGACACAAAGCACGAT+TGG | + | chr8_1:17159608-17159627 | None:intergenic | 45.0% | |
| GCTGGACAGTCATTCTGTTA+AGG | - | chr8_1:17159879-17159898 | Msa1182150:intron | 45.0% | |
| ! | CTCGCTCGTGGTTGATTTAA+TGG | - | chr8_1:17159947-17159966 | Msa1182150:CDS | 45.0% |
| CTGATCATTGCAGATCTCTG+AGG | - | chr8_1:17160323-17160342 | Msa1182150:CDS | 45.0% | |
| ! | ATTGCAGATCTCTGAGGAGT+TGG | - | chr8_1:17160329-17160348 | Msa1182150:CDS | 45.0% |
| ACACCTGTACATCATCTGAG+AGG | + | chr8_1:17160530-17160549 | None:intergenic | 45.0% | |
| AGGTTTCCACGGAGATTGTT+CGG | + | chr8_1:17160553-17160572 | None:intergenic | 45.0% | |
| ! | GGGGAAGGAAGCATAAAATG+TGG | + | chr8_1:17161222-17161241 | None:intergenic | 45.0% |
| ! | CATTTTATGCTTCCTTCCCC+TGG | - | chr8_1:17161222-17161241 | Msa1182150:intron | 45.0% |
| TAAACCACATCCAATCCCAG+GGG | + | chr8_1:17161241-17161260 | None:intergenic | 45.0% | |
| ! | ACACCCTAAGGCAAAGCTTT+TGG | + | chr8_1:17161861-17161880 | None:intergenic | 45.0% |
| !! | CTTGCTATTGAGCTGTCAAC+AGG | - | chr8_1:17162143-17162162 | Msa1182150:intron | 45.0% |
| ATTGAGCTGTCAACAGGACA+TGG | - | chr8_1:17162149-17162168 | Msa1182150:intron | 45.0% | |
| TGCCAATCCAAAGGGCTATA+TGG | - | chr8_1:17162331-17162350 | Msa1182150:intron | 45.0% | |
| TTCATCGTCCCAACGATCAT+GGG | - | chr8_1:17162406-17162425 | Msa1182150:intron | 45.0% | |
| CTGCAATTCCCATGATCGTT+GGG | + | chr8_1:17162417-17162436 | None:intergenic | 45.0% | |
| TCTGCAATTCCCATGATCGT+TGG | + | chr8_1:17162418-17162437 | None:intergenic | 45.0% | |
| !! | TTTCTTGGCTCTGACATGGA+AGG | - | chr8_1:17162673-17162692 | Msa1182150:intron | 45.0% |
| CAGCCTCCAACTGTTTCAAA+TGG | + | chr8_1:17162723-17162742 | None:intergenic | 45.0% | |
| AGACACATACAGACCTCAGT+TGG | + | chr8_1:17162784-17162803 | None:intergenic | 45.0% | |
| GATCCTGTCATTACTCCAAG+TGG | - | chr8_1:17162926-17162945 | Msa1182150:intron | 45.0% | |
| TGTCCACTTGGAGTAATGAC+AGG | + | chr8_1:17162932-17162951 | None:intergenic | 45.0% | |
| GTGAATTTGATCCGATCACG+AGG | - | chr8_1:17163087-17163106 | Msa1182150:intron | 45.0% | |
| ! | TTCATGGACTGCTTCCCTAA+TGG | + | chr8_1:17163150-17163169 | None:intergenic | 45.0% |
| AGGAAGGAACCACAGCAAAT+TGG | + | chr8_1:17163482-17163501 | None:intergenic | 45.0% | |
| !! | CGGAGAGTACCGATGAAGAA+AGG | + | chr8_1:17159206-17159225 | None:intergenic | 50.0% |
| ACCGTCGTTTCGCAAAAGCT+CGG | + | chr8_1:17159397-17159416 | None:intergenic | 50.0% | |
| !! | CTCAGTGTAAGCATCGATGG+CGG | + | chr8_1:17159451-17159470 | None:intergenic | 50.0% |
| TAGTGAATGGGAGAGGGTTG+AGG | - | chr8_1:17159834-17159853 | Msa1182150:intron | 50.0% | |
| TCAACCACGAGCGAGACAAA+AGG | + | chr8_1:17159942-17159961 | None:intergenic | 50.0% | |
| AAGCTTTGCCTTAGGGTGTG+TGG | - | chr8_1:17161862-17161881 | Msa1182150:intron | 50.0% | |
| !! | AAAAGCGTCCACACACCCTA+AGG | + | chr8_1:17161873-17161892 | None:intergenic | 50.0% |
| GCACCACACTGAAAATCAGC+AGG | + | chr8_1:17162224-17162243 | None:intergenic | 50.0% | |
| !! | AAGGCTTTGGATCTTGGGAG+AGG | - | chr8_1:17162308-17162327 | Msa1182150:intron | 50.0% |
| GTTCATCGTCCCAACGATCA+TGG | - | chr8_1:17162405-17162424 | Msa1182150:intron | 50.0% | |
| TCAAGTGGTTCCCTCGTGAT+CGG | + | chr8_1:17163101-17163120 | None:intergenic | 50.0% | |
| AATGAGGCCAAACGCTTCGG+CGG | - | chr8_1:17159362-17159381 | Msa1182150:three_prime_UTR | 55.0% | |
| ! | GCCGAGCTTTTGCGAAACGA+CGG | - | chr8_1:17159393-17159412 | Msa1182150:three_prime_UTR | 55.0% |
| CGCCATCGATGCTTACACTG+AGG | - | chr8_1:17159449-17159468 | Msa1182150:three_prime_UTR | 55.0% | |
| ! | TCCTCCTTTTGTCTCGCTCG+TGG | - | chr8_1:17159935-17159954 | Msa1182150:intron | 55.0% |
| ACCACGAGCGAGACAAAAGG+AGG | + | chr8_1:17159939-17159958 | None:intergenic | 55.0% | |
| ! | TGCACGCGCGATGCACATTT+TGG | - | chr8_1:17160075-17160094 | Msa1182150:intron | 55.0% |
| ! | GCACGCGCGATGCACATTTT+GGG | - | chr8_1:17160076-17160095 | Msa1182150:intron | 55.0% |
| TGGTTCCTGGGCTGCGTTAA+AGG | - | chr8_1:17160435-17160454 | Msa1182150:intron | 55.0% | |
| GGTTCCTGGGCTGCGTTAAA+GGG | - | chr8_1:17160436-17160455 | Msa1182150:intron | 55.0% | |
| GTTCCTGGGCTGCGTTAAAG+GGG | - | chr8_1:17160437-17160456 | Msa1182150:intron | 55.0% | |
| TTCCTGGGCTGCGTTAAAGG+GGG | - | chr8_1:17160438-17160457 | Msa1182150:intron | 55.0% | |
| AGGTGTCCGAACAATCTCCG+TGG | - | chr8_1:17160544-17160563 | Msa1182150:intron | 55.0% | |
| ATGCTTCCTTCCCCTGGGAT+TGG | - | chr8_1:17161228-17161247 | Msa1182150:intron | 55.0% | |
| !! | TGGGAGAGGTGCCAATCCAA+AGG | - | chr8_1:17162322-17162341 | Msa1182150:intron | 55.0% |
| !! | GGGAGAGGTGCCAATCCAAA+GGG | - | chr8_1:17162323-17162342 | Msa1182150:intron | 55.0% |
| ! | TGTCTCACCGCCGAAGCGTT+TGG | + | chr8_1:17159372-17159391 | None:intergenic | 60.0% |
| AACCCCCTTTAACGCAGCCC+AGG | + | chr8_1:17160443-17160462 | None:intergenic | 60.0% | |
| CCACATCCAATCCCAGGGGA+AGG | + | chr8_1:17161237-17161256 | None:intergenic | 60.0% | |
| CCTTCCCCTGGGATTGGATG+TGG | - | chr8_1:17161234-17161253 | Msa1182150:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 17159152 | 17163574 | 17159152 | ID=Msa1182150;Name=Msa1182150 |
| chr8_1 | mRNA | 17159152 | 17163574 | 17159152 | ID=Msa1182150-mRNA-1;Parent=Msa1182150;Name=Msa1182150-mRNA-1;_AED=0.02;_eAED=0.02;_QI=211|1|1|1|1|1|8|366|277 |
| chr8_1 | exon | 17159152 | 17159643 | 17159152 | ID=Msa1182150-mRNA-1:exon:6383;Parent=Msa1182150-mRNA-1 |
| chr8_1 | exon | 17159735 | 17159845 | 17159735 | ID=Msa1182150-mRNA-1:exon:6382;Parent=Msa1182150-mRNA-1 |
| chr8_1 | exon | 17159937 | 17160087 | 17159937 | ID=Msa1182150-mRNA-1:exon:6381;Parent=Msa1182150-mRNA-1 |
| chr8_1 | exon | 17160282 | 17160415 | 17160282 | ID=Msa1182150-mRNA-1:exon:6380;Parent=Msa1182150-mRNA-1 |
| chr8_1 | exon | 17161752 | 17161823 | 17161752 | ID=Msa1182150-mRNA-1:exon:6379;Parent=Msa1182150-mRNA-1 |
| chr8_1 | exon | 17162826 | 17162889 | 17162826 | ID=Msa1182150-mRNA-1:exon:6378;Parent=Msa1182150-mRNA-1 |
| chr8_1 | exon | 17163091 | 17163158 | 17163091 | ID=Msa1182150-mRNA-1:exon:6377;Parent=Msa1182150-mRNA-1 |
| chr8_1 | exon | 17163256 | 17163574 | 17163256 | ID=Msa1182150-mRNA-1:exon:6376;Parent=Msa1182150-mRNA-1 |
| chr8_1 | five_prime_UTR | 17163364 | 17163574 | 17163364 | ID=Msa1182150-mRNA-1:five_prime_utr;Parent=Msa1182150-mRNA-1 |
| chr8_1 | CDS | 17163256 | 17163363 | 17163256 | ID=Msa1182150-mRNA-1:cds;Parent=Msa1182150-mRNA-1 |
| chr8_1 | CDS | 17163091 | 17163158 | 17163091 | ID=Msa1182150-mRNA-1:cds;Parent=Msa1182150-mRNA-1 |
| chr8_1 | CDS | 17162826 | 17162889 | 17162826 | ID=Msa1182150-mRNA-1:cds;Parent=Msa1182150-mRNA-1 |
| chr8_1 | CDS | 17161752 | 17161823 | 17161752 | ID=Msa1182150-mRNA-1:cds;Parent=Msa1182150-mRNA-1 |
| chr8_1 | CDS | 17160282 | 17160415 | 17160282 | ID=Msa1182150-mRNA-1:cds;Parent=Msa1182150-mRNA-1 |
| chr8_1 | CDS | 17159937 | 17160087 | 17159937 | ID=Msa1182150-mRNA-1:cds;Parent=Msa1182150-mRNA-1 |
| chr8_1 | CDS | 17159735 | 17159845 | 17159735 | ID=Msa1182150-mRNA-1:cds;Parent=Msa1182150-mRNA-1 |
| chr8_1 | CDS | 17159518 | 17159643 | 17159518 | ID=Msa1182150-mRNA-1:cds;Parent=Msa1182150-mRNA-1 |
| chr8_1 | three_prime_UTR | 17159152 | 17159517 | 17159152 | ID=Msa1182150-mRNA-1:three_prime_utr;Parent=Msa1182150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
