AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1183360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1183360 MtrunA17_Chr8g0335981 99.000 800 8 0 47 846 1 800 0.0 1580
Msa1183360 MtrunA17_Chr7g0250221 63.027 806 231 15 47 829 1 762 0.0 849
Msa1183360 MtrunA17_Chr8g0372111 57.241 290 120 2 238 523 392 681 2.55e-105 347
Msa1183360 MtrunA17_Chr7g0276201 29.021 286 194 7 221 504 67 345 3.44e-33 134
Msa1183360 MtrunA17_Chr7g0266451 31.020 245 161 5 262 505 102 339 9.31e-30 124
Msa1183360 MtrunA17_Chr4g0026301 29.893 281 187 6 227 504 77 350 5.92e-29 122
Msa1183360 MtrunA17_Chr1g0153181 24.016 254 170 7 263 504 34 276 1.78e-15 80.9
Msa1183360 MtrunA17_Chr4g0068631 30.508 177 102 6 262 424 89 258 1.27e-14 78.2
Msa1183360 MtrunA17_Chr6g0465751 22.134 253 178 6 263 507 27 268 1.16e-12 71.6
Msa1183360 MtrunA17_Chr2g0288251 23.792 269 171 10 263 505 62 322 2.42e-12 69.7
Msa1183360 MtrunA17_Chr3g0134141 23.504 234 160 7 263 486 26 250 3.34e-12 70.1
Msa1183360 MtrunA17_Chr7g0265341 22.353 255 175 6 263 505 72 315 1.63e-11 68.2
Msa1183360 MtrunA17_Chr4g0044541 27.313 227 131 6 246 448 200 416 4.29e-11 66.6
Msa1183360 MtrunA17_Chr0c09g0493511 22.222 270 185 7 256 506 26 289 4.54e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1183360 AT2G44710.2 57.340 797 291 15 47 812 1 779 0.0 708
Msa1183360 AT2G44710.1 57.340 797 291 15 47 812 1 779 0.0 708
Msa1183360 AT2G44710.4 60.993 705 233 11 136 812 4 694 0.0 699
Msa1183360 AT2G44710.3 52.668 431 110 13 436 812 25 415 1.59e-108 341
Msa1183360 AT4G00830.2 30.225 311 189 9 199 496 53 348 2.79e-33 135
Msa1183360 AT4G00830.1 30.225 311 189 9 199 496 53 348 2.79e-33 135
Msa1183360 AT4G00830.6 30.225 311 189 9 199 496 53 348 2.79e-33 135
Msa1183360 AT4G00830.4 29.582 311 191 9 199 496 53 348 2.05e-31 129
Msa1183360 AT4G00830.3 28.939 311 185 9 199 496 53 340 3.58e-29 122
Msa1183360 AT4G00830.5 28.939 311 185 9 199 496 53 340 3.58e-29 122
Msa1183360 AT3G52660.3 28.409 352 213 8 147 495 10 325 1.30e-18 90.5
Msa1183360 AT3G52660.1 28.409 352 213 8 147 495 10 325 1.30e-18 90.5
Msa1183360 AT3G52660.2 28.409 352 213 8 147 495 10 325 1.30e-18 90.5
Msa1183360 AT2G47310.1 31.667 180 102 5 262 424 111 286 1.08e-15 81.3
Msa1183360 AT4G34110.1 23.904 251 168 6 263 501 38 277 4.93e-15 79.7
Msa1183360 AT4G34110.1 28.241 216 123 5 257 448 211 418 4.37e-11 67.0
Msa1183360 AT4G16280.3 27.586 174 111 3 262 424 121 290 2.18e-13 74.3
Msa1183360 AT4G16280.2 27.586 174 111 3 262 424 121 290 3.27e-13 73.9
Msa1183360 AT4G16280.4 27.586 174 111 3 262 424 46 215 5.43e-13 73.2
Msa1183360 AT3G16380.1 25.097 259 165 7 263 505 23 268 6.57e-13 72.8
Msa1183360 AT1G49760.1 22.742 299 188 8 256 519 128 418 8.33e-13 72.8
Msa1183360 AT1G49760.2 22.742 299 188 8 256 519 128 418 8.33e-13 72.8
Msa1183360 AT3G13224.2 31.034 145 83 5 262 394 20 159 3.63e-12 69.3
Msa1183360 AT2G36660.1 23.320 253 173 6 263 505 26 267 7.47e-12 69.3
Msa1183360 AT1G71770.1 23.256 258 172 7 263 506 61 306 8.16e-12 69.3
Msa1183360 AT1G71770.2 23.256 258 172 7 263 506 61 306 8.16e-12 69.3
Msa1183360 AT1G22760.1 21.933 269 176 8 263 505 138 398 1.19e-11 68.9
Msa1183360 AT3G13224.3 31.034 145 83 5 262 394 11 150 1.32e-11 67.4

Find 337 sgRNAs with CRISPR-Local

Find 511 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCGCTGCAATTTCAGATTAA+TGG 0.120288 8_1:+18599976 Msa1183360:intron
GCTATTTATAGCATTATATT+TGG 0.124459 8_1:+18602929 Msa1183360:three_prime_UTR
TGCGATCCACAAAGAAATTT+AGG 0.171647 8_1:+18598215 Msa1183360:CDS
CTATATGAATACACTATTTA+TGG 0.194206 8_1:-18604005 None:intergenic
ACTCAACATTGCTCAGAAAT+AGG 0.200598 8_1:-18604110 None:intergenic
CCTCTTCTGCAGTCTCTTAA+AGG 0.203548 8_1:-18600335 None:intergenic
GGTTTACTTCTAGTTTATTT+TGG 0.211330 8_1:+18604408 Msa1183360:three_prime_UTR
CTGAAAGACGCCCAACTTAT+AGG 0.217326 8_1:+18601657 Msa1183360:CDS
CTTGTTTGGTTAAGGATTAA+TGG 0.234976 8_1:+18603200 Msa1183360:three_prime_UTR
TTCTTTCAATTTGCTATCAT+TGG 0.239685 8_1:+18604433 Msa1183360:three_prime_UTR
AAGGAGAAGTTGAAGCATTA+TGG 0.243038 8_1:+18600205 Msa1183360:CDS
TTGGGATGTGTTGGTGTTGT+AGG 0.249916 8_1:+18603414 Msa1183360:three_prime_UTR
GGACAGTGATACCCTCTATT+TGG 0.255911 8_1:+18600026 Msa1183360:CDS
GGCAGCCGAAGTTCTATTTC+TGG 0.258447 8_1:+18602242 Msa1183360:CDS
AGTAGAGTTGCTGCAGATTA+TGG 0.261306 8_1:+18601620 Msa1183360:CDS
AAACCGTGGATTTGCATTCT+TGG 0.273692 8_1:+18600282 Msa1183360:CDS
GCAGCACGAGCAGTACTTCT+AGG 0.280985 8_1:-18601716 None:intergenic
ATGACGGCCTTTGAAGCTTA+TGG 0.290365 8_1:+18602868 Msa1183360:three_prime_UTR
CGTGATTATGATTCTCTATC+TGG 0.292725 8_1:+18601839 Msa1183360:CDS
ATGTTATGAAGCTTACAATT+TGG 0.313318 8_1:+18602891 Msa1183360:three_prime_UTR
GAGAGACGAGCGTCTAGATT+TGG 0.313762 8_1:+18599383 Msa1183360:CDS
TTACATGGGCAGCGGTGGTT+CGG 0.320424 8_1:+18602623 Msa1183360:CDS
CAATAATGTCAAGGCCTTCT+TGG 0.321408 8_1:+18601273 Msa1183360:CDS
GTAGAAGATTCTAATGATAA+AGG 0.321671 8_1:+18600256 Msa1183360:CDS
GCGATCCACAAAGAAATTTA+GGG 0.321865 8_1:+18598216 Msa1183360:CDS
AAATAATTACTATGCGAAAT+CGG 0.321968 8_1:-18603603 None:intergenic
ACAGATCCGACATAATAAAT+TGG 0.322938 8_1:+18602835 Msa1183360:intron
AGAAGATGAAGAGGAGGTTA+AGG 0.326174 8_1:+18599341 Msa1183360:intron
CGGAATCTTCTGAAGAAATA+TGG 0.327291 8_1:+18600941 Msa1183360:CDS
GACTATGGATTTGTTACCTT+TGG 0.329610 8_1:+18601016 Msa1183360:CDS
CAGCATTACTGGTACAGAAT+TGG 0.331570 8_1:+18601069 Msa1183360:CDS
AGTAATAAGAATACTACTTC+AGG 0.334390 8_1:+18603363 Msa1183360:three_prime_UTR
GTTATTGAATTTGTGATGTA+TGG 0.337285 8_1:+18603024 Msa1183360:three_prime_UTR
TGCTCCAATACCATTTCATT+TGG 0.338317 8_1:+18603152 Msa1183360:three_prime_UTR
GTCTTCGGAGGCATTGTTAT+TGG 0.339548 8_1:-18598251 None:intergenic
TTGATGCACTTCCTCCTTCA+TGG 0.343649 8_1:+18600903 Msa1183360:CDS
AGATGTGCTGACAGCATTAC+TGG 0.343835 8_1:+18601058 Msa1183360:CDS
ATTGGGTGAAGGTGACAAAA+AGG 0.345418 8_1:+18601087 Msa1183360:CDS
CATATTTCTTCAGAAGATTC+CGG 0.347028 8_1:-18600940 None:intergenic
ACTCTAGTTTAGCTCTTGTT+AGG 0.347194 8_1:+18604361 Msa1183360:three_prime_UTR
GGCTAGAGATGCTACTTGTT+TGG 0.347463 8_1:+18603186 Msa1183360:three_prime_UTR
AGATGCTACTTGTTTGGTTA+AGG 0.350748 8_1:+18603192 Msa1183360:three_prime_UTR
CGAAACCCTAAATTTCTTTG+TGG 0.355378 8_1:-18598221 None:intergenic
CTATTTATAGCATTATATTT+GGG 0.356269 8_1:+18602930 Msa1183360:three_prime_UTR
TTAAGAAGATATTGCTCGTT+AGG 0.359179 8_1:+18604055 Msa1183360:three_prime_UTR
TCTGCAGCAACTCTACTTCT+TGG 0.363608 8_1:-18601614 None:intergenic
TGAAAGACGCCCAACTTATA+GGG 0.364958 8_1:+18601658 Msa1183360:CDS
GTTGGTGAAGAAGGTGATTC+AGG 0.368423 8_1:+18599528 Msa1183360:CDS
AAAGAGATGTTTAGTTACTT+TGG 0.370338 8_1:+18603274 Msa1183360:three_prime_UTR
TCACTGGGCGTGGGTTATTA+CGG 0.372222 8_1:+18604224 Msa1183360:three_prime_UTR
TGTTAGCTAACATACCTATA+TGG 0.373043 8_1:+18604326 Msa1183360:three_prime_UTR
TACATGGGCAGCGGTGGTTC+GGG 0.376852 8_1:+18602624 Msa1183360:CDS
AAGAATTTGAAGTATTTGTT+GGG 0.376985 8_1:+18599700 Msa1183360:CDS
TCTGCAAATGAAACCTTTGC+AGG 0.379216 8_1:-18600382 None:intergenic
AAAGAATTTGAAGTATTTGT+TGG 0.379388 8_1:+18599699 Msa1183360:CDS
TCATATTCATCAATGTATTC+TGG 0.380188 8_1:+18602576 Msa1183360:CDS
CTCAACATTGCTCAGAAATA+GGG 0.381387 8_1:-18604109 None:intergenic
AGCAGTGTGAAGAGAGATTA+TGG 0.381697 8_1:+18601569 Msa1183360:CDS
GAACCTCTCTTTGGCGTCTT+CGG 0.383318 8_1:-18598266 None:intergenic
TCGCGTGGGGTAAGAGGAAT+TGG 0.383971 8_1:+18601326 Msa1183360:CDS
AATTTAATTAATATATTCAC+TGG 0.386689 8_1:+18604208 Msa1183360:three_prime_UTR
ACTCAAGACAACCAACGATA+TGG 0.390525 8_1:-18603969 None:intergenic
GATTAAAGGTGCAATCGAAC+GGG 0.391043 8_1:-18604534 None:intergenic
TTCTCGTCGCGTGGGGTAAG+AGG 0.394358 8_1:+18601320 Msa1183360:CDS
TGTTTGCTTTGCTGTACTGC+AGG 0.395507 8_1:+18604281 Msa1183360:three_prime_UTR
CATAATAAATTGGCTGCAAT+AGG 0.395636 8_1:+18602845 Msa1183360:three_prime_UTR
CTGTCCAAATGAAATGGTAT+TGG 0.397342 8_1:-18603156 None:intergenic
TGAAAATAAAGTAGCAGAAA+AGG 0.404059 8_1:+18603727 Msa1183360:three_prime_UTR
ATCACCGTCTTCTCTTCAAC+AGG 0.406089 8_1:-18598374 None:intergenic
CAACTCCCGACCCACATTGT+TGG 0.407711 8_1:+18603909 Msa1183360:three_prime_UTR
GACAGTGATACCCTCTATTT+GGG 0.407780 8_1:+18600027 Msa1183360:CDS
TCAAGCTAGGTAGGGTGGGG+GGG 0.409790 8_1:-18603780 None:intergenic
ATAGCTTTATCTTCAACAAC+AGG 0.413355 8_1:-18598464 None:intergenic
ATCAAGCTAGGTAGGGTGGG+GGG 0.414623 8_1:-18603781 None:intergenic
CAGAAGAGGGATGTTACGTT+TGG 0.419497 8_1:+18600349 Msa1183360:CDS
TGCATATGTTTCCCAAATAG+AGG 0.423070 8_1:-18600038 None:intergenic
AATAATTACTATGCGAAATC+GGG 0.424824 8_1:-18603602 None:intergenic
TCTGGTAGGGGCACGGGTGG+CGG 0.427281 8_1:+18602594 Msa1183360:CDS
TCACAGTACGGTGATGCTTA+TGG 0.427536 8_1:+18602091 Msa1183360:CDS
GGAAGATCTAGTCTTGGATA+TGG 0.430356 8_1:+18602215 Msa1183360:CDS
GAAGTCGTGCTCCGCCAATC+AGG 0.430648 8_1:+18601348 Msa1183360:CDS
TTAATTAAATTATTAAATGC+AGG 0.434111 8_1:-18604196 None:intergenic
GCAAATGAACCAACATAAAT+CGG 0.435326 8_1:+18603819 Msa1183360:three_prime_UTR
GAGGTGGCCTCTCATACCTT+TGG 0.437240 8_1:-18601772 None:intergenic
AGCTTGATTTAGAAAAGCTC+GGG 0.442733 8_1:+18603796 Msa1183360:three_prime_UTR
CTACCCGCTGAACCTCTCTT+TGG 0.444963 8_1:-18598275 None:intergenic
GGGTGGCGGTAGCAGTTACA+TGG 0.445852 8_1:+18602608 Msa1183360:CDS
ATTAATATATTCACTGGGCG+TGG 0.447220 8_1:+18604214 Msa1183360:three_prime_UTR
GACAACCAACGATATGGTTC+GGG 0.447264 8_1:-18603963 None:intergenic
AGACAACCAACGATATGGTT+CGG 0.450861 8_1:-18603964 None:intergenic
CGTTCATATATGCATATGAA+TGG 0.451547 8_1:+18604387 Msa1183360:three_prime_UTR
CATGTCAATTCAAGCTATCT+CGG 0.454846 8_1:+18602974 Msa1183360:three_prime_UTR
CTTCAGTAGCATCCTTGTCT+AGG 0.455597 8_1:-18599725 None:intergenic
GTGAACATTTATATCCATAT+AGG 0.457194 8_1:-18604340 None:intergenic
TGATGAGAAGGAAATTGAAC+AGG 0.459626 8_1:+18599455 Msa1183360:CDS
GGTAGTGGCCTACTTCTAAC+TGG 0.460415 8_1:-18601410 None:intergenic
ACTCCAATCGAGCTCTTGAT+TGG 0.460826 8_1:-18602048 None:intergenic
TCTGCTGAATGTATCAAAGT+TGG 0.463094 8_1:+18603231 Msa1183360:three_prime_UTR
GCTCGATTGGAGTATGACTA+TGG 0.463175 8_1:+18602058 Msa1183360:CDS
TGATGCACTTCCTCCTTCAT+GGG 0.463181 8_1:+18600904 Msa1183360:CDS
ATGTATTCTGGTAGGGGCAC+GGG 0.463809 8_1:+18602588 Msa1183360:CDS
TGGTCTCTGTCCAAATGAAA+TGG 0.464020 8_1:-18603162 None:intergenic
GATCTAGCTGGAGGAGGTAG+TGG 0.465085 8_1:-18601425 None:intergenic
AGCATTACTGGTACAGAATT+GGG 0.466603 8_1:+18601070 Msa1183360:CDS
AGTCGGCAGGGCATGAGTTA+TGG 0.470717 8_1:+18602290 Msa1183360:CDS
CAACAATGTGGGTCGGGAGT+TGG 0.472402 8_1:-18603908 None:intergenic
GGTTCGGGATCTTATTATTG+AGG 0.473492 8_1:+18602639 Msa1183360:CDS
TTCAGGCCAAAGTGAGGGCT+AGG 0.475005 8_1:+18601177 Msa1183360:intron
AAATCAAGCTAGGTAGGGTG+GGG 0.475225 8_1:-18603783 None:intergenic
ATTGACAAAGAAATCACAAA+TGG 0.476354 8_1:+18603844 Msa1183360:three_prime_UTR
GCTGCTCGTAGAAAGGACTA+TGG 0.479913 8_1:+18601001 Msa1183360:CDS
GAGTATGAACCTGAGGAGTA+TGG 0.481139 8_1:+18599420 Msa1183360:CDS
ATGTGGTGTTACTCCGAGTC+AGG 0.485653 8_1:+18600005 Msa1183360:CDS
TTGGGGTTGTGACTGAGGTC+AGG 0.486683 8_1:+18599775 Msa1183360:CDS
AGCTATCTCGGGTCTTCTCT+AGG 0.487176 8_1:+18602986 Msa1183360:three_prime_UTR
GGTGGATAATCCCTATAAGT+TGG 0.487528 8_1:-18601668 None:intergenic
TTCATCAATGTATTCTGGTA+GGG 0.489027 8_1:+18602581 Msa1183360:CDS
TAACATTATCCACCCACAAA+TGG 0.489703 8_1:-18603117 None:intergenic
ATTATCTTGCAGTCCACCTC+AGG 0.491057 8_1:-18603528 None:intergenic
TTTCATATTCACTTGAGTGA+TGG 0.491336 8_1:-18603709 None:intergenic
TGGGGTGTATAGCAGTCGGC+AGG 0.491775 8_1:+18602277 Msa1183360:CDS
AAACTATGCAGGTTACTAGA+TGG 0.492265 8_1:-18603579 None:intergenic
GGGCGTCCTTCACGATAACT+TGG 0.494376 8_1:-18601815 None:intergenic
CCCCGTAGTTTCTCGTCGCG+TGG 0.495353 8_1:+18601311 Msa1183360:CDS
GACAACCAACAATGTGGGTC+GGG 0.497247 8_1:-18603914 None:intergenic
GGTGATTGAAGAAGAGATCA+AGG 0.499484 8_1:+18598391 Msa1183360:CDS
CATGCCAGCTGCTCGTAGAA+AGG 0.501010 8_1:+18600994 Msa1183360:CDS
GGCATGTATTCATCAAGTTA+TGG 0.501599 8_1:+18602428 Msa1183360:CDS
TAGCTTGATTTAGAAAAGCT+CGG 0.505512 8_1:+18603795 Msa1183360:three_prime_UTR
AAATGTTGAGGATATAACTT+TGG 0.505813 8_1:+18600234 Msa1183360:CDS
GTGGATAATCCCTATAAGTT+GGG 0.506076 8_1:-18601667 None:intergenic
TTGATTTATGATACCATTTG+TGG 0.506608 8_1:+18603104 Msa1183360:three_prime_UTR
CTTCTATCATAAGATCTAGC+TGG 0.506659 8_1:-18601437 None:intergenic
TTAGCATCTTCTACAGCCTC+AGG 0.507277 8_1:-18598506 None:intergenic
AGATGGTCATGATGAAATTG+AGG 0.507610 8_1:+18599566 Msa1183360:CDS
TGTCTATACCAGTTAGAAGT+AGG 0.507727 8_1:+18601402 Msa1183360:CDS
CTTTAGCTTCTGCATTGTAG+TGG 0.508113 8_1:+18603680 Msa1183360:three_prime_UTR
ATTCATCAATGTATTCTGGT+AGG 0.509049 8_1:+18602580 Msa1183360:CDS
CGTGGAAAACATGTTGGTCG+TGG 0.512930 8_1:+18601224 Msa1183360:CDS
TAAATCAAGCTAGGTAGGGT+GGG 0.514078 8_1:-18603784 None:intergenic
GAACTGATAATATTTGCTGC+TGG 0.515056 8_1:+18603479 Msa1183360:three_prime_UTR
ACAAATGGTATCATAAATCA+AGG 0.517968 8_1:-18603102 None:intergenic
AGGCCACTTCAGAGAGGCCG+TGG 0.518391 8_1:+18601206 Msa1183360:CDS
TTGAAAAGATTGAGCTTGCA+AGG 0.519002 8_1:+18600969 Msa1183360:CDS
ATGAATACACTATTTATGGT+AGG 0.519124 8_1:-18604001 None:intergenic
ACGATAACTTGGATGGGAAG+GGG 0.520335 8_1:-18601804 None:intergenic
TGTCAATGACCGATTTATGT+TGG 0.520554 8_1:-18603828 None:intergenic
TAGTCCTTTCTACGAGCAGC+TGG 0.522172 8_1:-18600998 None:intergenic
TCGCCAATCAAGAGCTCGAT+TGG 0.522669 8_1:+18602045 Msa1183360:CDS
CACGATAACTTGGATGGGAA+GGG 0.522951 8_1:-18601805 None:intergenic
TTGCAGCCAATTTATTATGT+CGG 0.523352 8_1:-18602841 None:intergenic
GTTTGCTTTGCTGTACTGCA+GGG 0.523702 8_1:+18604282 Msa1183360:three_prime_UTR
GGCGGTGATTACGTTTCTCG+TGG 0.524345 8_1:+18602449 Msa1183360:CDS
CATGGGATGAAGATTATGTC+CGG 0.524547 8_1:+18600921 Msa1183360:CDS
TTAATATATTCACTGGGCGT+GGG 0.524594 8_1:+18604215 Msa1183360:three_prime_UTR
AAGAGAGGTTCAGCGGGTAG+TGG 0.526935 8_1:+18598278 Msa1183360:CDS
GAAGAAAATGTTGGTGAAGA+AGG 0.528899 8_1:+18599519 Msa1183360:CDS
GGATTATCTTCTTCCACCAC+AGG 0.529137 8_1:-18598443 None:intergenic
CCCCACGCGACGAGAAACTA+CGG 0.529221 8_1:-18601313 None:intergenic
CCTCTCTTTGGCGTCTTCGG+AGG 0.529474 8_1:-18598263 None:intergenic
GACGAGAAACTACGGGGTGC+AGG 0.529835 8_1:-18601305 None:intergenic
TGATGAAATTGAGGGAGAAG+AGG 0.531641 8_1:+18599575 Msa1183360:CDS
TGATTTATGATACCATTTGT+GGG 0.531763 8_1:+18603105 Msa1183360:three_prime_UTR
TTCCTCCCGCTCAGATGCAA+TGG 0.532515 8_1:+18600309 Msa1183360:CDS
AATGTATTCTGGTAGGGGCA+CGG 0.532761 8_1:+18602587 Msa1183360:CDS
TCATATAGTATACATCTTGA+AGG 0.532816 8_1:+18604020 Msa1183360:three_prime_UTR
ATGTCAATTCAAGCTATCTC+GGG 0.533625 8_1:+18602975 Msa1183360:three_prime_UTR
TGATTAAAGGTGCAATCGAA+CGG 0.534453 8_1:-18604535 None:intergenic
GTCCTTCACGATAACTTGGA+TGG 0.535270 8_1:-18601811 None:intergenic
TGGGTTATTACGGACTGACT+TGG 0.535832 8_1:+18604234 Msa1183360:three_prime_UTR
CTAAATCAAGCTAGGTAGGG+TGG 0.535850 8_1:-18603785 None:intergenic
AATCAAGCTAGGTAGGGTGG+GGG 0.536002 8_1:-18603782 None:intergenic
TCTAGTCTTGGATATGGTAG+TGG 0.536113 8_1:+18602221 Msa1183360:CDS
GAAGGAAATTGAACAGGAAG+AGG 0.536425 8_1:+18599461 Msa1183360:CDS
TGAGGTGGGAGATGAAGTTG+AGG 0.536948 8_1:+18599488 Msa1183360:CDS
TTTCCACGGCCTCTCTGAAG+TGG 0.538452 8_1:-18601209 None:intergenic
ATCTCGGGTCTTCTCTAGGT+GGG 0.538541 8_1:+18602990 Msa1183360:three_prime_UTR
GGTGGCAGTGCTTCACAGTA+CGG 0.540610 8_1:+18602079 Msa1183360:CDS
TTTGACAGAAGATGAAGAGG+AGG 0.540760 8_1:+18599335 Msa1183360:intron
ATAACATCCATAAGCTTCAA+AGG 0.541184 8_1:-18602875 None:intergenic
TCCTTCACGATAACTTGGAT+GGG 0.541440 8_1:-18601810 None:intergenic
TGACCGTGAGCGTGCGGAGA+TGG 0.541802 8_1:+18599623 Msa1183360:CDS
GGATGACGAGCATGCTGATG+AGG 0.542036 8_1:+18599596 Msa1183360:CDS
ACAAGTAGCATCTCTAGCCT+TGG 0.543111 8_1:-18603182 None:intergenic
GGCATCCATTGCATCTGAGC+GGG 0.544260 8_1:-18600314 None:intergenic
AAGTGAGGGCTAGGTTATCA+AGG 0.544468 8_1:+18601186 Msa1183360:CDS
TCATCCACGTAACCTCTCCT+AGG 0.544554 8_1:-18601740 None:intergenic
TGAATACACTATTTATGGTA+GGG 0.545218 8_1:-18604000 None:intergenic
CTAGCACTGATAGACCTGAT+TGG 0.546036 8_1:-18601362 None:intergenic
ATATGGTTCGGGAGTTGGAA+AGG 0.546047 8_1:-18603952 None:intergenic
ACGCCAAAGAGAGGTTCAGC+GGG 0.548771 8_1:+18598272 Msa1183360:CDS
TTTAGCTTCTGCATTGTAGT+GGG 0.549715 8_1:+18603681 Msa1183360:three_prime_UTR
GCAGCAACTCTACTTCTTGG+AGG 0.550856 8_1:-18601611 None:intergenic
GCGAAATCGGGAAACTATGC+AGG 0.552820 8_1:-18603590 None:intergenic
GCAGGTCGGCTGCTCCAAGA+AGG 0.553373 8_1:-18601287 None:intergenic
CCTTTAAGAGACTGCAGAAG+AGG 0.553892 8_1:+18600335 Msa1183360:CDS
TGATAACCTAGCCCTCACTT+TGG 0.554695 8_1:-18601183 None:intergenic
AGCGGGTAGTGGTTCAAAGA+GGG 0.555066 8_1:+18598289 Msa1183360:CDS
GCATATGTTTCCCAAATAGA+GGG 0.556114 8_1:-18600037 None:intergenic
CGATAACTTGGATGGGAAGG+GGG 0.557684 8_1:-18601803 None:intergenic
TTTCTAAATCAAGCTAGGTA+GGG 0.557945 8_1:-18603788 None:intergenic
TAAAATGAATACTTATGCAT+AGG 0.558067 8_1:-18604156 None:intergenic
GGGGACTATCGCCCGAGTCG+CGG 0.559741 8_1:+18601245 Msa1183360:CDS
GTGTTGTAGGATTTGTGACA+TGG 0.559819 8_1:+18603427 Msa1183360:three_prime_UTR
ACGGTGATGCTTATGGTGAT+AGG 0.560365 8_1:+18602098 Msa1183360:CDS
ACAAGGGATTTGCATTCTTG+CGG 0.561118 8_1:+18599826 Msa1183360:CDS
CAGCACGAGCAGTACTTCTA+GGG 0.561773 8_1:-18601715 None:intergenic
TCACGATAACTTGGATGGGA+AGG 0.562072 8_1:-18601806 None:intergenic
TCATCAATGTATTCTGGTAG+GGG 0.563889 8_1:+18602582 Msa1183360:CDS
TCTTATGATAGAAGACCAGC+TGG 0.564284 8_1:+18601446 Msa1183360:CDS
ACAGGAAGAGGGACATGAGG+TGG 0.565462 8_1:+18599473 Msa1183360:CDS
TATGGTTCGGGAGTTGGAAA+GGG 0.565701 8_1:-18603951 None:intergenic
AGACGAGCGTCTAGATTTGG+AGG 0.566469 8_1:+18599386 Msa1183360:CDS
TTGCTGCAGATTATGGATCA+AGG 0.567085 8_1:+18601627 Msa1183360:CDS
GGCGAGGAAGAAGTCGAAGA+TGG 0.567156 8_1:+18599549 Msa1183360:CDS
AGGAGAGGTTACGTGGATGA+TGG 0.568734 8_1:+18601743 Msa1183360:CDS
GGGTGATGAAATTATGTCAC+AGG 0.569604 8_1:+18600420 Msa1183360:CDS
AGAATTTGAAGTATTTGTTG+GGG 0.569779 8_1:+18599701 Msa1183360:CDS
GTGGAAAACATGTTGGTCGT+GGG 0.572181 8_1:+18601225 Msa1183360:CDS
AGCAGCATCGTGTGAGCCAA+AGG 0.572202 8_1:-18601032 None:intergenic
TATGGCGGTAATGATGTTGG+AGG 0.573247 8_1:+18602407 Msa1183360:CDS
TCAACCCCACCATACTCCTC+AGG 0.573263 8_1:-18599429 None:intergenic
CAACTCCCGAACCATATCGT+TGG 0.573646 8_1:+18603958 Msa1183360:three_prime_UTR
GTTCCTGTGATGTAGGTTGG+TGG 0.574215 8_1:+18602549 Msa1183360:intron
GATGGTCATGATGAAATTGA+GGG 0.574247 8_1:+18599567 Msa1183360:CDS
TGCAGAAGCTAAAGATTCTG+TGG 0.576513 8_1:-18603671 None:intergenic
TGGAGTTGATAAGCCTGCAA+AGG 0.576604 8_1:+18600369 Msa1183360:CDS
AGAAGAGAATCTCGTTGTTG+AGG 0.578538 8_1:+18598415 Msa1183360:CDS
ATTCTTGCGGTTTGAAAATG+TGG 0.580185 8_1:+18599839 Msa1183360:CDS
TATTCTGGTAGGGGCACGGG+TGG 0.580301 8_1:+18602591 Msa1183360:CDS
AGCAGTTACATGGGCAGCGG+TGG 0.581899 8_1:+18602618 Msa1183360:CDS
GGACTCAAGTTAGTGAGCGA+TGG 0.582663 8_1:+18603045 Msa1183360:three_prime_UTR
CTTCTTTCAGGCCAAAGTGA+GGG 0.583789 8_1:+18601172 Msa1183360:intron
TCTTCTTTCAGGCCAAAGTG+AGG 0.584613 8_1:+18601171 Msa1183360:intron
ATAAGTTGGGCGTCTTTCAG+AGG 0.585266 8_1:-18601654 None:intergenic
TCTTATGGCGGTAATGATGT+TGG 0.585997 8_1:+18602404 Msa1183360:CDS
GGTAGCAGTTACATGGGCAG+CGG 0.586041 8_1:+18602615 Msa1183360:CDS
AGTATACATCTTGAAGGAGG+AGG 0.586205 8_1:+18604026 Msa1183360:three_prime_UTR
GCGTGCGGAGATGGCTGATG+TGG 0.586432 8_1:+18599632 Msa1183360:CDS
CTTTAAGAGACTGCAGAAGA+GGG 0.587293 8_1:+18600336 Msa1183360:CDS
ATTCCAAGAATGCAAATCCA+CGG 0.588526 8_1:-18600285 None:intergenic
ATTATTGCAGATCCGCGACT+CGG 0.588971 8_1:-18601257 None:intergenic
TGAATGTACTTCATGCACCC+TGG 0.589383 8_1:+18603752 Msa1183360:three_prime_UTR
ATGAACCTGAGGAGTATGGT+GGG 0.592467 8_1:+18599424 Msa1183360:CDS
CTAACTGGTATAGACATGAC+AGG 0.592654 8_1:-18601395 None:intergenic
TTCCGATCAGGCTCTTATGG+CGG 0.592662 8_1:+18602392 Msa1183360:intron
TCATAAGATCTAGCTGGAGG+AGG 0.592974 8_1:-18601431 None:intergenic
TTATGGAGTTACAAATGTTG+AGG 0.593298 8_1:+18600222 Msa1183360:CDS
GCAACTCTACTTCTTGGAGG+TGG 0.594233 8_1:-18601608 None:intergenic
TACTCCTCAGGTTCATACTC+AGG 0.594399 8_1:-18599417 None:intergenic
ATTTAATTAATATATTCACT+GGG 0.594789 8_1:+18604209 Msa1183360:three_prime_UTR
CACATGGGGTGTATAGCAGT+CGG 0.596161 8_1:+18602273 Msa1183360:CDS
CGGCAGGGCATGAGTTATGG+TGG 0.596513 8_1:+18602293 Msa1183360:CDS
AGGGTATCACTGTCCTGACT+CGG 0.597119 8_1:-18600018 None:intergenic
TTATTGCAGATCCGCGACTC+GGG 0.598224 8_1:-18601256 None:intergenic
CTTGACCAGAAATAGAACTT+CGG 0.598989 8_1:-18602247 None:intergenic
ATTTCTGGTCAAGATTCACA+TGG 0.599253 8_1:+18602257 Msa1183360:CDS
ATCGTGAAGTTGTGAAGGAG+AGG 0.601698 8_1:+18599667 Msa1183360:CDS
TTGTGAAGGAGAGGCGAAAG+CGG 0.603327 8_1:+18599676 Msa1183360:CDS
CAGCGGGTAGTGGTTCAAAG+AGG 0.603447 8_1:+18598288 Msa1183360:CDS
TGGGAAACATATGCAAAACA+TGG 0.603494 8_1:+18600046 Msa1183360:CDS
GGAACATCGTGAAGTTGTGA+AGG 0.603844 8_1:+18599662 Msa1183360:CDS
GAAGAACCTGAAGAAAATGT+TGG 0.605476 8_1:+18599510 Msa1183360:CDS
TGATTGGCGAGCACCAGTAT+CGG 0.605757 8_1:-18602032 None:intergenic
AGAGTCGGAAGATCTAGTCT+TGG 0.608797 8_1:+18602209 Msa1183360:intron
CCGTAGTTTCTCGTCGCGTG+GGG 0.609247 8_1:+18601313 Msa1183360:CDS
AGACAACCAACAATGTGGGT+CGG 0.609812 8_1:-18603915 None:intergenic
AGAGGCCGTGGAAAACATGT+TGG 0.610472 8_1:+18601218 Msa1183360:CDS
CCTCCGAAGACGCCAAAGAG+AGG 0.610557 8_1:+18598263 Msa1183360:CDS
TGGATGATGGTTACAGCCAA+AGG 0.611800 8_1:+18601756 Msa1183360:CDS
CAGGAAGAGGGACATGAGGT+GGG 0.612912 8_1:+18599474 Msa1183360:CDS
CAGATTAATGGAAAACAATG+TGG 0.614039 8_1:+18599988 Msa1183360:intron
ATCCATTGCATCTGAGCGGG+AGG 0.615124 8_1:-18600311 None:intergenic
TACTGAAGATGATCTGAGGA+AGG 0.616779 8_1:+18599740 Msa1183360:CDS
ACATAATCTTCATCCCATGA+AGG 0.617754 8_1:-18600917 None:intergenic
TCCCATCCAAGTTATCGTGA+AGG 0.617871 8_1:+18601809 Msa1183360:CDS
TGAACCTGTTGAAGAGAAGA+CGG 0.620053 8_1:+18598370 Msa1183360:CDS
GCGGGTAGTGGTTCAAAGAG+GGG 0.620078 8_1:+18598290 Msa1183360:CDS
TATCTCGGGTCTTCTCTAGG+TGG 0.620442 8_1:+18602989 Msa1183360:three_prime_UTR
TTTCATTTGGACAGAGACCA+AGG 0.620910 8_1:+18603165 Msa1183360:three_prime_UTR
GCACTGATAGACCTGATTGG+CGG 0.621354 8_1:-18601359 None:intergenic
TATGAATCAAATTGCTCCTG+AGG 0.621990 8_1:+18598490 Msa1183360:CDS
GGAGCATGACCGTGAGCGTG+CGG 0.623217 8_1:+18599617 Msa1183360:CDS
TGGGGTTGACTATGATGAGA+AGG 0.623447 8_1:+18599443 Msa1183360:CDS
TTTCTGGTCAAGATTCACAT+GGG 0.629433 8_1:+18602258 Msa1183360:CDS
AAGGAAATTGAACAGGAAGA+GGG 0.629624 8_1:+18599462 Msa1183360:CDS
CTCAAGACAACCAACAATGT+GGG 0.630768 8_1:-18603919 None:intergenic
GTGTGAAGAGAGATTATGGT+CGG 0.631539 8_1:+18601573 Msa1183360:CDS
AGAAACTACGGGGTGCAGGT+CGG 0.632474 8_1:-18601301 None:intergenic
ATTAAAGGTGCAATCGAACG+GGG 0.635393 8_1:-18604533 None:intergenic
TGAAGTTGGGGTTGTGACTG+AGG 0.635514 8_1:+18599770 Msa1183360:CDS
CAGGGCATGAGTTATGGTGG+AGG 0.638372 8_1:+18602296 Msa1183360:CDS
AATTGGCTGCAATAGGATGA+CGG 0.638558 8_1:+18602852 Msa1183360:three_prime_UTR
GTTACAGCCAAAGGTATGAG+AGG 0.639419 8_1:+18601765 Msa1183360:CDS
GTACTGCTCGTGCTGCACCT+AGG 0.640481 8_1:+18601723 Msa1183360:CDS
AATGATAAAGGAACAAACCG+TGG 0.644326 8_1:+18600268 Msa1183360:CDS
ACTCAAGACAACCAACAATG+TGG 0.644646 8_1:-18603920 None:intergenic
TGGAAAACATGTTGGTCGTG+GGG 0.645687 8_1:+18601226 Msa1183360:CDS
GCGGATCTGCAATAATGTCA+AGG 0.645997 8_1:+18601264 Msa1183360:CDS
GATGGCTGATGTGGATGAAG+AGG 0.646717 8_1:+18599641 Msa1183360:CDS
CATATGCAAAACATGGACAA+AGG 0.647157 8_1:+18600053 Msa1183360:CDS
TGATCCTGAGTATGAACCTG+AGG 0.648209 8_1:+18599413 Msa1183360:CDS
GACGCCAAAGAGAGGTTCAG+CGG 0.648754 8_1:+18598271 Msa1183360:CDS
GCTCGTGCTGCACCTAGGAG+AGG 0.649097 8_1:+18601728 Msa1183360:CDS
ACTGGTACAGAATTGGGTGA+AGG 0.649153 8_1:+18601076 Msa1183360:CDS
ATGCTACTGAAGATGATCTG+AGG 0.650341 8_1:+18599736 Msa1183360:CDS
TATAGTATACATCTTGAAGG+AGG 0.651097 8_1:+18604023 Msa1183360:three_prime_UTR
TAATCTTCATCCCATGAAGG+AGG 0.656027 8_1:-18600914 None:intergenic
TGAACAGGAAGAGGGACATG+AGG 0.656320 8_1:+18599470 Msa1183360:CDS
GGGGTGTATAGCAGTCGGCA+GGG 0.660281 8_1:+18602278 Msa1183360:CDS
GGTGGCGGTAGCAGTTACAT+GGG 0.660439 8_1:+18602609 Msa1183360:CDS
TGCACCTAGGAGAGGTTACG+TGG 0.661010 8_1:+18601736 Msa1183360:CDS
GAATTTGAAGTATTTGTTGG+GGG 0.661371 8_1:+18599702 Msa1183360:CDS
CTATCATAAGATCTAGCTGG+AGG 0.665556 8_1:-18601434 None:intergenic
TTCTGGTCAAGATTCACATG+GGG 0.667528 8_1:+18602259 Msa1183360:CDS
TATAGGGATTATCCACCTCG+TGG 0.670506 8_1:+18601674 Msa1183360:CDS
CCAGTATCGGCGTATCTTGG+GGG 0.678120 8_1:-18602019 None:intergenic
CGATTGGAGTATGACTATGG+TGG 0.680575 8_1:+18602061 Msa1183360:CDS
TATGAACCTGAGGAGTATGG+TGG 0.681041 8_1:+18599423 Msa1183360:CDS
GAGTAGTCAGATCCACGAGG+TGG 0.682031 8_1:-18601686 None:intergenic
TCTTCTGAAGAAATATGGCG+AGG 0.682225 8_1:+18600946 Msa1183360:CDS
GTGACATAATTTCATCACCC+GGG 0.686563 8_1:-18600417 None:intergenic
TGAAGAAGGTGATTCAGGCG+AGG 0.686633 8_1:+18599533 Msa1183360:CDS
ATGTATTCATCAAGTTATGG+CGG 0.691988 8_1:+18602431 Msa1183360:CDS
GGTAGTGGTTCAAAGAGGGG+TGG 0.693327 8_1:+18598293 Msa1183360:CDS
TTTATGATACCATTTGTGGG+TGG 0.694018 8_1:+18603108 Msa1183360:three_prime_UTR
TGTGACATAATTTCATCACC+CGG 0.700332 8_1:-18600418 None:intergenic
AGGCATCCATTGCATCTGAG+CGG 0.701954 8_1:-18600315 None:intergenic
GATAGAGAATCATAATCACG+AGG 0.709014 8_1:-18601836 None:intergenic
GCTTGATTTAGAAAAGCTCG+GGG 0.709373 8_1:+18603797 Msa1183360:three_prime_UTR
TAACTGGTATAGACATGACA+GGG 0.713524 8_1:-18601394 None:intergenic
AGGGGTGGCAGATTATCGAG+AGG 0.718242 8_1:+18598308 Msa1183360:CDS
GCAAAGCAAACAGAACAGTG+TGG 0.727441 8_1:-18604270 None:intergenic
ATAGAGAATCATAATCACGA+GGG 0.739313 8_1:-18601835 None:intergenic
TGAACCTGAGGAGTATGGTG+GGG 0.741917 8_1:+18599425 Msa1183360:CDS
TTATCAAGGCCACTTCAGAG+AGG 0.757296 8_1:+18601200 Msa1183360:CDS
TCAGAGTAGTCAGATCCACG+AGG 0.788482 8_1:-18601689 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATAAAAAATCTTACTTT+TGG - chr8_1:18598537-18598556 None:intergenic 10.0%
!!! AAAGTTAACTTTTTAAATTA+TGG + chr8_1:18598577-18598596 Msa1183360:intron 10.0%
!!! TTGATTTTTTTTTATATTTG+GGG + chr8_1:18598671-18598690 Msa1183360:intron 10.0%
!!! TTTTTGTATGAATTATTTTT+CGG + chr8_1:18599004-18599023 Msa1183360:intron 10.0%
!!! TTATTATGAATTTACTTTTA+AGG + chr8_1:18600748-18600767 Msa1183360:intron 10.0%
!!! TATTATGAATTTACTTTTAA+GGG + chr8_1:18600749-18600768 Msa1183360:intron 10.0%
!! TTAATTAAATTATTAAATGC+AGG - chr8_1:18604199-18604218 None:intergenic 10.0%
!! AATTTAATTAATATATTCAC+TGG + chr8_1:18604208-18604227 Msa1183360:three_prime_UTR 10.0%
!! ATTTAATTAATATATTCACT+GGG + chr8_1:18604209-18604228 Msa1183360:three_prime_UTR 10.0%
!!! TTAAATTGTTTATGGATTAT+TGG + chr8_1:18598698-18598717 Msa1183360:intron 15.0%
!!! TAAATTGTTTATGGATTATT+GGG + chr8_1:18598699-18598718 Msa1183360:intron 15.0%
!!! TATGGTAATTGTAATTTTTA+AGG + chr8_1:18598747-18598766 Msa1183360:intron 15.0%
!!! AAAAAAAATTGTTACTTTTG+TGG + chr8_1:18600697-18600716 Msa1183360:intron 15.0%
!!! ACTTTCATTTATTATTTCTT+AGG + chr8_1:18601499-18601518 Msa1183360:intron 15.0%
!! AAACATAATAAAAGTAAGTA+TGG - chr8_1:18602372-18602391 None:intergenic 15.0%
!! CTATTTATAGCATTATATTT+GGG + chr8_1:18602930-18602949 Msa1183360:three_prime_UTR 15.0%
!!! ATTTTATTATTACATTCAAG+AGG + chr8_1:18603878-18603897 Msa1183360:three_prime_UTR 15.0%
!!! TTTTATTATTACATTCAAGA+GGG + chr8_1:18603879-18603898 Msa1183360:three_prime_UTR 15.0%
!!! TAAATTTTTGAGAGAGAATT+GGG - chr8_1:18598160-18598179 None:intergenic 20.0%
!! AATTCTCTCTCAAAAATTTA+GGG + chr8_1:18598160-18598179 Msa1183360:CDS 20.0%
!!! AAATTGTTTATGGATTATTG+GGG + chr8_1:18598700-18598719 Msa1183360:intron 20.0%
!!! AAATTTTAAGGGTTTGAATA+TGG + chr8_1:18598729-18598748 Msa1183360:intron 20.0%
!!! AGTTTATATTGTTTTGTTGT+AGG + chr8_1:18598790-18598809 Msa1183360:intron 20.0%
!! TATAATTCATCATTAGATGA+AGG + chr8_1:18598864-18598883 Msa1183360:intron 20.0%
!!! AAAGAATTTGAAGTATTTGT+TGG + chr8_1:18599699-18599718 Msa1183360:CDS 20.0%
!!! AAGAATTTGAAGTATTTGTT+GGG + chr8_1:18599700-18599719 Msa1183360:CDS 20.0%
!!! TTTTTTGAAGGTTTTTTAAG+CGG + chr8_1:18600471-18600490 Msa1183360:intron 20.0%
!! AAAATTTGATCAGTAAAATG+AGG - chr8_1:18600856-18600875 None:intergenic 20.0%
!!! GATCAAATTTTTCAAATTTC+AGG + chr8_1:18600865-18600884 Msa1183360:intron 20.0%
!! AAAATGTAAGAATGAATTAC+AGG - chr8_1:18602182-18602201 None:intergenic 20.0%
!! GCTATTTATAGCATTATATT+TGG + chr8_1:18602929-18602948 Msa1183360:three_prime_UTR 20.0%
!!! AGTCAAAAGATGATTTTTTT+TGG + chr8_1:18603395-18603414 Msa1183360:three_prime_UTR 20.0%
!!! GTCAAAAGATGATTTTTTTT+GGG + chr8_1:18603396-18603415 Msa1183360:three_prime_UTR 20.0%
!! AAATAATTACTATGCGAAAT+CGG - chr8_1:18603606-18603625 None:intergenic 20.0%
!! CTATATGAATACACTATTTA+TGG - chr8_1:18604008-18604027 None:intergenic 20.0%
!! TAAAATGAATACTTATGCAT+AGG - chr8_1:18604159-18604178 None:intergenic 20.0%
!!! CTAAATTTTTGAGAGAGAAT+TGG - chr8_1:18598161-18598180 None:intergenic 25.0%
! CAATTCTCTCTCAAAAATTT+AGG + chr8_1:18598159-18598178 Msa1183360:CDS 25.0%
!!! TTGGGGTTTTTGAAATTTTA+AGG + chr8_1:18598717-18598736 Msa1183360:intron 25.0%
!!! TGGGGTTTTTGAAATTTTAA+GGG + chr8_1:18598718-18598737 Msa1183360:intron 25.0%
!!! TATTGTTTTGTTGTAGGAAA+AGG + chr8_1:18598796-18598815 Msa1183360:intron 25.0%
!! TGTTATCGCTTCTTTTATTA+TGG + chr8_1:18598918-18598937 Msa1183360:intron 25.0%
! TTATGTGTTTGTGTTATGTT+TGG + chr8_1:18599032-18599051 Msa1183360:intron 25.0%
!!! AATCATGAAGTGGTTTTAAA+TGG + chr8_1:18599062-18599081 Msa1183360:intron 25.0%
!!! ATCATGAAGTGGTTTTAAAT+GGG + chr8_1:18599063-18599082 Msa1183360:intron 25.0%
!!! AAAGTTAAGTCTATTTTGAC+TGG + chr8_1:18599288-18599307 Msa1183360:intron 25.0%
!!! AAGTTAAGTCTATTTTGACT+GGG + chr8_1:18599289-18599308 Msa1183360:intron 25.0%
! AAAATAGTACAGGTTTCAAT+TGG - chr8_1:18599316-18599335 None:intergenic 25.0%
!! AGAATTTGAAGTATTTGTTG+GGG + chr8_1:18599701-18599720 Msa1183360:CDS 25.0%
! AAATGTTGAGGATATAACTT+TGG + chr8_1:18600234-18600253 Msa1183360:CDS 25.0%
! GTAGAAGATTCTAATGATAA+AGG + chr8_1:18600256-18600275 Msa1183360:CDS 25.0%
!! TTTTCTGAATAGAAATTCCT+TGG + chr8_1:18600446-18600465 Msa1183360:intron 25.0%
! TTTCTGAATAGAAATTCCTT+GGG + chr8_1:18600447-18600466 Msa1183360:intron 25.0%
! TGTAAAAACTGGAAAATTGT+GGG - chr8_1:18600642-18600661 None:intergenic 25.0%
! ATGTAAAAACTGGAAAATTG+TGG - chr8_1:18600643-18600662 None:intergenic 25.0%
! TTTCTCATCCTAAAATATAC+CGG - chr8_1:18600791-18600810 None:intergenic 25.0%
! TGAATTACAGGACAAAAAAT+AGG - chr8_1:18602170-18602189 None:intergenic 25.0%
!!! TACATTTTGATTTGTAGAGT+CGG + chr8_1:18602194-18602213 Msa1183360:intron 25.0%
!! TTTATTATGTTTTTCCGATC+AGG + chr8_1:18602380-18602399 Msa1183360:intron 25.0%
! TCATATTCATCAATGTATTC+TGG + chr8_1:18602576-18602595 Msa1183360:CDS 25.0%
!! TATAAGTGGATGTATTTTTC+TGG + chr8_1:18602721-18602740 Msa1183360:intron 25.0%
! ATGTTATGAAGCTTACAATT+TGG + chr8_1:18602891-18602910 Msa1183360:three_prime_UTR 25.0%
! GTTATTGAATTTGTGATGTA+TGG + chr8_1:18603024-18603043 Msa1183360:three_prime_UTR 25.0%
! ACAAATGGTATCATAAATCA+AGG - chr8_1:18603105-18603124 None:intergenic 25.0%
! TTGATTTATGATACCATTTG+TGG + chr8_1:18603104-18603123 Msa1183360:three_prime_UTR 25.0%
! TGATTTATGATACCATTTGT+GGG + chr8_1:18603105-18603124 Msa1183360:three_prime_UTR 25.0%
! AAAGAGATGTTTAGTTACTT+TGG + chr8_1:18603274-18603293 Msa1183360:three_prime_UTR 25.0%
! AGTAATAAGAATACTACTTC+AGG + chr8_1:18603363-18603382 Msa1183360:three_prime_UTR 25.0%
!!! ATCATGCTTTTTACTTTCTT+AGG - chr8_1:18603459-18603478 None:intergenic 25.0%
! AATAATTACTATGCGAAATC+GGG - chr8_1:18603605-18603624 None:intergenic 25.0%
! TGAAAATAAAGTAGCAGAAA+AGG + chr8_1:18603727-18603746 Msa1183360:three_prime_UTR 25.0%
! ATTGACAAAGAAATCACAAA+TGG + chr8_1:18603844-18603863 Msa1183360:three_prime_UTR 25.0%
! TGAATACACTATTTATGGTA+GGG - chr8_1:18604003-18604022 None:intergenic 25.0%
! ATGAATACACTATTTATGGT+AGG - chr8_1:18604004-18604023 None:intergenic 25.0%
! TCATATAGTATACATCTTGA+AGG + chr8_1:18604020-18604039 Msa1183360:three_prime_UTR 25.0%
!! ATTCATTTTATTGCATCTTG+TGG + chr8_1:18604169-18604188 Msa1183360:three_prime_UTR 25.0%
! GTGAACATTTATATCCATAT+AGG - chr8_1:18604343-18604362 None:intergenic 25.0%
!!! GGTTTACTTCTAGTTTATTT+TGG + chr8_1:18604408-18604427 Msa1183360:three_prime_UTR 25.0%
!!! TTCTTTCAATTTGCTATCAT+TGG + chr8_1:18604433-18604452 Msa1183360:three_prime_UTR 25.0%
!! ATAGCTTTATCTTCAACAAC+AGG - chr8_1:18598467-18598486 None:intergenic 30.0%
TTAAATTATGGCGAAAAGTG+AGG + chr8_1:18598589-18598608 Msa1183360:intron 30.0%
TGAAATTATAGCGAAAAGTG+AGG + chr8_1:18598630-18598649 Msa1183360:intron 30.0%
GGGGTTGTTTAAATTGTTTA+TGG + chr8_1:18598690-18598709 Msa1183360:intron 30.0%
TATGGTTGTTGCAATTGAAT+AGG + chr8_1:18598936-18598955 Msa1183360:intron 30.0%
! ATGTTGTCAAATATTGGTTG+TGG + chr8_1:18599100-18599119 Msa1183360:intron 30.0%
! CATAGCAAAAGAAGGATTTT+AGG + chr8_1:18599175-18599194 Msa1183360:intron 30.0%
ATCCACAACAATGTTATCAA+TGG - chr8_1:18599208-18599227 None:intergenic 30.0%
CATTGTGCAATGATTGAATA+TGG + chr8_1:18599229-18599248 Msa1183360:intron 30.0%
CTTCTGTCAAAAAATAGTAC+AGG - chr8_1:18599326-18599345 None:intergenic 30.0%
!!! TTTTTTGACAGAAGATGAAG+AGG + chr8_1:18599332-18599351 Msa1183360:intron 30.0%
! GAATTTGAAGTATTTGTTGG+GGG + chr8_1:18599702-18599721 Msa1183360:CDS 30.0%
TGACTTCTCAATAATAGAGT+AGG + chr8_1:18599911-18599930 Msa1183360:intron 30.0%
CAGATTAATGGAAAACAATG+TGG + chr8_1:18599988-18600007 Msa1183360:intron 30.0%
GCTGAATTTATGACTGTTAA+TGG + chr8_1:18600164-18600183 Msa1183360:intron 30.0%
TTATGGAGTTACAAATGTTG+AGG + chr8_1:18600222-18600241 Msa1183360:CDS 30.0%
!!! AATTCCTTGGGTTTTTTTGA+AGG + chr8_1:18600459-18600478 Msa1183360:intron 30.0%
AAAACCTTCAAAAAAACCCA+AGG - chr8_1:18600466-18600485 None:intergenic 30.0%
! AGTTTGAAATTGTAATCACG+TGG + chr8_1:18600606-18600625 Msa1183360:intron 30.0%
! GTTTGAAATTGTAATCACGT+GGG + chr8_1:18600607-18600626 Msa1183360:intron 30.0%
CATATTTCTTCAGAAGATTC+CGG - chr8_1:18600943-18600962 None:intergenic 30.0%
TAATGCTTTCATCTTCTTTC+AGG + chr8_1:18601160-18601179 Msa1183360:intron 30.0%
ATAGAGAATCATAATCACGA+GGG - chr8_1:18601838-18601857 None:intergenic 30.0%
TGCAGAAATAATACTAACCA+CGG - chr8_1:18601885-18601904 None:intergenic 30.0%
CAGGACAAAAAATAGGATTA+GGG - chr8_1:18602163-18602182 None:intergenic 30.0%
ACAGGACAAAAAATAGGATT+AGG - chr8_1:18602164-18602183 None:intergenic 30.0%
ATGTATTCATCAAGTTATGG+CGG + chr8_1:18602431-18602450 Msa1183360:CDS 30.0%
ATTCATCAATGTATTCTGGT+AGG + chr8_1:18602580-18602599 Msa1183360:CDS 30.0%
TTCATCAATGTATTCTGGTA+GGG + chr8_1:18602581-18602600 Msa1183360:CDS 30.0%
TGTGCTTTGTGTATTACATT+AGG + chr8_1:18602688-18602707 Msa1183360:intron 30.0%
!! AGATTTTGCTATACTCGAAA+TGG + chr8_1:18602744-18602763 Msa1183360:intron 30.0%
ACAGATCCGACATAATAAAT+TGG + chr8_1:18602835-18602854 Msa1183360:intron 30.0%
TTGCAGCCAATTTATTATGT+CGG - chr8_1:18602844-18602863 None:intergenic 30.0%
CATAATAAATTGGCTGCAAT+AGG + chr8_1:18602845-18602864 Msa1183360:three_prime_UTR 30.0%
ATAACATCCATAAGCTTCAA+AGG - chr8_1:18602878-18602897 None:intergenic 30.0%
CTTGTTTGGTTAAGGATTAA+TGG + chr8_1:18603200-18603219 Msa1183360:three_prime_UTR 30.0%
!!! TGATTTTTTTTGGGATGTGT+TGG + chr8_1:18603405-18603424 Msa1183360:three_prime_UTR 30.0%
TTTCATATTCACTTGAGTGA+TGG - chr8_1:18603712-18603731 None:intergenic 30.0%
TTTCTAAATCAAGCTAGGTA+GGG - chr8_1:18603791-18603810 None:intergenic 30.0%
! TTTTCTAAATCAAGCTAGGT+AGG - chr8_1:18603792-18603811 None:intergenic 30.0%
TAGCTTGATTTAGAAAAGCT+CGG + chr8_1:18603795-18603814 Msa1183360:three_prime_UTR 30.0%
GCAAATGAACCAACATAAAT+CGG + chr8_1:18603819-18603838 Msa1183360:three_prime_UTR 30.0%
TATAGTATACATCTTGAAGG+AGG + chr8_1:18604023-18604042 Msa1183360:three_prime_UTR 30.0%
TTAAGAAGATATTGCTCGTT+AGG + chr8_1:18604055-18604074 Msa1183360:three_prime_UTR 30.0%
TGTTAGCTAACATACCTATA+TGG + chr8_1:18604326-18604345 Msa1183360:three_prime_UTR 30.0%
CGTTCATATATGCATATGAA+TGG + chr8_1:18604387-18604406 Msa1183360:three_prime_UTR 30.0%
TGCGATCCACAAAGAAATTT+AGG + chr8_1:18598215-18598234 Msa1183360:CDS 35.0%
GCGATCCACAAAGAAATTTA+GGG + chr8_1:18598216-18598235 Msa1183360:CDS 35.0%
CGAAACCCTAAATTTCTTTG+TGG - chr8_1:18598224-18598243 None:intergenic 35.0%
TATGAATCAAATTGCTCCTG+AGG + chr8_1:18598490-18598509 Msa1183360:CDS 35.0%
AGCGATAACAGCTTACAAAA+AGG - chr8_1:18598908-18598927 None:intergenic 35.0%
TGGTGATATCAATCATGAAG+TGG + chr8_1:18599052-18599071 Msa1183360:intron 35.0%
!!! GGTTTTAAATGGGAATCATG+TGG + chr8_1:18599073-18599092 Msa1183360:intron 35.0%
GGATCGATGTTGTCAAATAT+TGG + chr8_1:18599094-18599113 Msa1183360:intron 35.0%
! ATATTGGTTGTGGCAGATTT+CGG + chr8_1:18599110-18599129 Msa1183360:intron 35.0%
CACAACAATGTTATCAATGG+CGG - chr8_1:18599205-18599224 None:intergenic 35.0%
TGATGAGAAGGAAATTGAAC+AGG + chr8_1:18599455-18599474 Msa1183360:CDS 35.0%
AAGGAAATTGAACAGGAAGA+GGG + chr8_1:18599462-18599481 Msa1183360:CDS 35.0%
GAAGAACCTGAAGAAAATGT+TGG + chr8_1:18599510-18599529 Msa1183360:CDS 35.0%
! TCTTCACCAACATTTTCTTC+AGG - chr8_1:18599519-18599538 None:intergenic 35.0%
! GAAGAAAATGTTGGTGAAGA+AGG + chr8_1:18599519-18599538 Msa1183360:CDS 35.0%
AGATGGTCATGATGAAATTG+AGG + chr8_1:18599566-18599585 Msa1183360:CDS 35.0%
GATGGTCATGATGAAATTGA+GGG + chr8_1:18599567-18599586 Msa1183360:CDS 35.0%
TCCTCAGACAAAAAAGAACA+AGG + chr8_1:18599809-18599828 Msa1183360:CDS 35.0%
CCTCAGACAAAAAAGAACAA+GGG + chr8_1:18599810-18599829 Msa1183360:CDS 35.0%
ATTCTTGCGGTTTGAAAATG+TGG + chr8_1:18599839-18599858 Msa1183360:CDS 35.0%
AGAAGTCAAAGATTACCACT+GGG - chr8_1:18599899-18599918 None:intergenic 35.0%
TCGCTGCAATTTCAGATTAA+TGG + chr8_1:18599976-18599995 Msa1183360:intron 35.0%
GCATATGTTTCCCAAATAGA+GGG - chr8_1:18600040-18600059 None:intergenic 35.0%
TGCATATGTTTCCCAAATAG+AGG - chr8_1:18600041-18600060 None:intergenic 35.0%
TGGGAAACATATGCAAAACA+TGG + chr8_1:18600046-18600065 Msa1183360:CDS 35.0%
CATATGCAAAACATGGACAA+AGG + chr8_1:18600053-18600072 Msa1183360:CDS 35.0%
! AGCTGTAAGTCTAGTTGTTT+TGG + chr8_1:18600077-18600096 Msa1183360:intron 35.0%
! TCAATGAAGGTGCAAAAAAC+AGG - chr8_1:18600104-18600123 None:intergenic 35.0%
TTGCACCTTCATTGAATTGT+TGG + chr8_1:18600109-18600128 Msa1183360:intron 35.0%
TGCACCTTCATTGAATTGTT+GGG + chr8_1:18600110-18600129 Msa1183360:intron 35.0%
ACAACCCAACAATTCAATGA+AGG - chr8_1:18600117-18600136 None:intergenic 35.0%
TCATAAATTCAGCAGAGTTC+AGG - chr8_1:18600157-18600176 None:intergenic 35.0%
ATGACTGTTAATGGAACTTC+TGG + chr8_1:18600173-18600192 Msa1183360:intron 35.0%
! AAGGAGAAGTTGAAGCATTA+TGG + chr8_1:18600205-18600224 Msa1183360:CDS 35.0%
AATGATAAAGGAACAAACCG+TGG + chr8_1:18600268-18600287 Msa1183360:CDS 35.0%
ATTCCAAGAATGCAAATCCA+CGG - chr8_1:18600288-18600307 None:intergenic 35.0%
! TGCAGATTCTTTTATTGACC+CGG + chr8_1:18600399-18600418 Msa1183360:CDS 35.0%
TGTGACATAATTTCATCACC+CGG - chr8_1:18600421-18600440 None:intergenic 35.0%
CAAAATTAACCAACCACTGA+TGG - chr8_1:18600536-18600555 None:intergenic 35.0%
!! CAGTGGTTGGTTAATTTTGT+TGG + chr8_1:18600537-18600556 Msa1183360:intron 35.0%
CACATCACGAATGTAAAAAC+TGG - chr8_1:18600653-18600672 None:intergenic 35.0%
! CAGTTTTTACATTCGTGATG+TGG + chr8_1:18600651-18600670 Msa1183360:intron 35.0%
! ATGACACACCGGTATATTTT+AGG + chr8_1:18600780-18600799 Msa1183360:intron 35.0%
ATGAGAAACTATCCTTCTAG+TGG + chr8_1:18600803-18600822 Msa1183360:intron 35.0%
GGAATAAATACATCTACACC+TGG - chr8_1:18600835-18600854 None:intergenic 35.0%
ACATAATCTTCATCCCATGA+AGG - chr8_1:18600920-18600939 None:intergenic 35.0%
! CGGAATCTTCTGAAGAAATA+TGG + chr8_1:18600941-18600960 Msa1183360:CDS 35.0%
TTGAAAAGATTGAGCTTGCA+AGG + chr8_1:18600969-18600988 Msa1183360:CDS 35.0%
!! GACTATGGATTTGTTACCTT+TGG + chr8_1:18601016-18601035 Msa1183360:CDS 35.0%
AGCATTACTGGTACAGAATT+GGG + chr8_1:18601070-18601089 Msa1183360:CDS 35.0%
TAACTGGTATAGACATGACA+GGG - chr8_1:18601397-18601416 None:intergenic 35.0%
TGTCTATACCAGTTAGAAGT+AGG + chr8_1:18601402-18601421 Msa1183360:CDS 35.0%
CTTCTATCATAAGATCTAGC+TGG - chr8_1:18601440-18601459 None:intergenic 35.0%
GTGGATAATCCCTATAAGTT+GGG - chr8_1:18601670-18601689 None:intergenic 35.0%
GATAGAGAATCATAATCACG+AGG - chr8_1:18601839-18601858 None:intergenic 35.0%
CGTGATTATGATTCTCTATC+TGG + chr8_1:18601839-18601858 Msa1183360:CDS 35.0%
AATGAGATCGTAAACAATGC+AGG - chr8_1:18601926-18601945 None:intergenic 35.0%
!!! TTTGTTTTTTATGCCCAACC+AGG + chr8_1:18601988-18602007 Msa1183360:intron 35.0%
CTTGACCAGAAATAGAACTT+CGG - chr8_1:18602250-18602269 None:intergenic 35.0%
!! ATTTCTGGTCAAGATTCACA+TGG + chr8_1:18602257-18602276 Msa1183360:CDS 35.0%
! TTTCTGGTCAAGATTCACAT+GGG + chr8_1:18602258-18602277 Msa1183360:CDS 35.0%
GGCATGTATTCATCAAGTTA+TGG + chr8_1:18602428-18602447 Msa1183360:CDS 35.0%
ATCTATTGTTCCTGTGATGT+AGG + chr8_1:18602542-18602561 Msa1183360:intron 35.0%
TCATCAATGTATTCTGGTAG+GGG + chr8_1:18602582-18602601 Msa1183360:CDS 35.0%
TAGGATGCATTCAGTATAAG+TGG + chr8_1:18602707-18602726 Msa1183360:intron 35.0%
! CATCTCTTATCTTTTCGCAA+GGG + chr8_1:18602767-18602786 Msa1183360:intron 35.0%
CTGTTCATAGACAAATTCAC+TGG - chr8_1:18602819-18602838 None:intergenic 35.0%
CATGTCAATTCAAGCTATCT+CGG + chr8_1:18602974-18602993 Msa1183360:three_prime_UTR 35.0%
ATGTCAATTCAAGCTATCTC+GGG + chr8_1:18602975-18602994 Msa1183360:three_prime_UTR 35.0%
TTTATGATACCATTTGTGGG+TGG + chr8_1:18603108-18603127 Msa1183360:three_prime_UTR 35.0%
TAACATTATCCACCCACAAA+TGG - chr8_1:18603120-18603139 None:intergenic 35.0%
TGCTCCAATACCATTTCATT+TGG + chr8_1:18603152-18603171 Msa1183360:three_prime_UTR 35.0%
CTGTCCAAATGAAATGGTAT+TGG - chr8_1:18603159-18603178 None:intergenic 35.0%
! AGATGCTACTTGTTTGGTTA+AGG + chr8_1:18603192-18603211 Msa1183360:three_prime_UTR 35.0%
TCTGCTGAATGTATCAAAGT+TGG + chr8_1:18603231-18603250 Msa1183360:three_prime_UTR 35.0%
! GAACTGATAATATTTGCTGC+TGG + chr8_1:18603479-18603498 Msa1183360:three_prime_UTR 35.0%
!! TACTTTGAGTTTTTGTCCTG+AGG + chr8_1:18603512-18603531 Msa1183360:three_prime_UTR 35.0%
AAACTATGCAGGTTACTAGA+TGG - chr8_1:18603582-18603601 None:intergenic 35.0%
! TTTAGCTTCTGCATTGTAGT+GGG + chr8_1:18603681-18603700 Msa1183360:three_prime_UTR 35.0%
! GAGCTTTTCTAAATCAAGCT+AGG - chr8_1:18603796-18603815 None:intergenic 35.0%
AGCTTGATTTAGAAAAGCTC+GGG + chr8_1:18603796-18603815 Msa1183360:three_prime_UTR 35.0%
! TGTCAATGACCGATTTATGT+TGG - chr8_1:18603831-18603850 None:intergenic 35.0%
CTCAACATTGCTCAGAAATA+GGG - chr8_1:18604112-18604131 None:intergenic 35.0%
ACTCAACATTGCTCAGAAAT+AGG - chr8_1:18604113-18604132 None:intergenic 35.0%
ATTAATATATTCACTGGGCG+TGG + chr8_1:18604214-18604233 Msa1183360:three_prime_UTR 35.0%
TTAATATATTCACTGGGCGT+GGG + chr8_1:18604215-18604234 Msa1183360:three_prime_UTR 35.0%
!! ACTCTAGTTTAGCTCTTGTT+AGG + chr8_1:18604361-18604380 Msa1183360:three_prime_UTR 35.0%
TGAACCTGTTGAAGAGAAGA+CGG + chr8_1:18598370-18598389 Msa1183360:CDS 40.0%
GGTGATTGAAGAAGAGATCA+AGG + chr8_1:18598391-18598410 Msa1183360:CDS 40.0%
AGAAGAGAATCTCGTTGTTG+AGG + chr8_1:18598415-18598434 Msa1183360:CDS 40.0%
! CGCCATTGATAACATTGTTG+TGG + chr8_1:18599203-18599222 Msa1183360:intron 40.0%
TTTGACAGAAGATGAAGAGG+AGG + chr8_1:18599335-18599354 Msa1183360:intron 40.0%
AGAAGATGAAGAGGAGGTTA+AGG + chr8_1:18599341-18599360 Msa1183360:intron 40.0%
GAAGGAAATTGAACAGGAAG+AGG + chr8_1:18599461-18599480 Msa1183360:CDS 40.0%
TGATGAAATTGAGGGAGAAG+AGG + chr8_1:18599575-18599594 Msa1183360:CDS 40.0%
ATGCTACTGAAGATGATCTG+AGG + chr8_1:18599736-18599755 Msa1183360:CDS 40.0%
TACTGAAGATGATCTGAGGA+AGG + chr8_1:18599740-18599759 Msa1183360:CDS 40.0%
! GATGATCTGAGGAAGGTTTT+CGG + chr8_1:18599747-18599766 Msa1183360:CDS 40.0%
!!! CCCTTGTTCTTTTTTGTCTG+AGG - chr8_1:18599813-18599832 None:intergenic 40.0%
ACAAGGGATTTGCATTCTTG+CGG + chr8_1:18599826-18599845 Msa1183360:CDS 40.0%
GAGAAGTCAAAGATTACCAC+TGG - chr8_1:18599900-18599919 None:intergenic 40.0%
GACAGTGATACCCTCTATTT+GGG + chr8_1:18600027-18600046 Msa1183360:CDS 40.0%
GCTTCAACTTCTCCTTTAAC+TGG - chr8_1:18600201-18600220 None:intergenic 40.0%
AAACCGTGGATTTGCATTCT+TGG + chr8_1:18600282-18600301 Msa1183360:CDS 40.0%
! CTTTAAGAGACTGCAGAAGA+GGG + chr8_1:18600336-18600355 Msa1183360:CDS 40.0%
TCTGCAAATGAAACCTTTGC+AGG - chr8_1:18600385-18600404 None:intergenic 40.0%
! GCAGATTCTTTTATTGACCC+GGG + chr8_1:18600400-18600419 Msa1183360:CDS 40.0%
GTGACATAATTTCATCACCC+GGG - chr8_1:18600420-18600439 None:intergenic 40.0%
GGGTGATGAAATTATGTCAC+AGG + chr8_1:18600420-18600439 Msa1183360:CDS 40.0%
TAAGCGGAACATGTGTAGAA+TGG + chr8_1:18600487-18600506 Msa1183360:intron 40.0%
ATGAGTTCCAATACCATCAG+TGG + chr8_1:18600520-18600539 Msa1183360:intron 40.0%
TAACCAACCACTGATGGTAT+TGG - chr8_1:18600530-18600549 None:intergenic 40.0%
GAAACTATCCTTCTAGTGGT+TGG + chr8_1:18600807-18600826 Msa1183360:intron 40.0%
TAATCTTCATCCCATGAAGG+AGG - chr8_1:18600917-18600936 None:intergenic 40.0%
CATGGGATGAAGATTATGTC+CGG + chr8_1:18600921-18600940 Msa1183360:CDS 40.0%
! TCTTCTGAAGAAATATGGCG+AGG + chr8_1:18600946-18600965 Msa1183360:CDS 40.0%
CAGCATTACTGGTACAGAAT+TGG + chr8_1:18601069-18601088 Msa1183360:CDS 40.0%
ATTGGGTGAAGGTGACAAAA+AGG + chr8_1:18601087-18601106 Msa1183360:CDS 40.0%
AATATCTGCGCAGTGAAACA+TGG + chr8_1:18601130-18601149 Msa1183360:intron 40.0%
CAATAATGTCAAGGCCTTCT+TGG + chr8_1:18601273-18601292 Msa1183360:CDS 40.0%
CTAACTGGTATAGACATGAC+AGG - chr8_1:18601398-18601417 None:intergenic 40.0%
CTATCATAAGATCTAGCTGG+AGG - chr8_1:18601437-18601456 None:intergenic 40.0%
TCTTATGATAGAAGACCAGC+TGG + chr8_1:18601446-18601465 Msa1183360:CDS 40.0%
ATTGTACACTACATACCAGC+TGG - chr8_1:18601464-18601483 None:intergenic 40.0%
GCAGCATCTAGAAGACAATA+TGG - chr8_1:18601539-18601558 None:intergenic 40.0%
AGCAGTGTGAAGAGAGATTA+TGG + chr8_1:18601569-18601588 Msa1183360:CDS 40.0%
GTGTGAAGAGAGATTATGGT+CGG + chr8_1:18601573-18601592 Msa1183360:CDS 40.0%
AGTAGAGTTGCTGCAGATTA+TGG + chr8_1:18601620-18601639 Msa1183360:CDS 40.0%
TTGCTGCAGATTATGGATCA+AGG + chr8_1:18601627-18601646 Msa1183360:CDS 40.0%
TGAAAGACGCCCAACTTATA+GGG + chr8_1:18601658-18601677 Msa1183360:CDS 40.0%
GGTGGATAATCCCTATAAGT+TGG - chr8_1:18601671-18601690 None:intergenic 40.0%
TCCTTCACGATAACTTGGAT+GGG - chr8_1:18601813-18601832 None:intergenic 40.0%
!! GGAAGATCTAGTCTTGGATA+TGG + chr8_1:18602215-18602234 Msa1183360:CDS 40.0%
!! TCTAGTCTTGGATATGGTAG+TGG + chr8_1:18602221-18602240 Msa1183360:CDS 40.0%
TTCTGGTCAAGATTCACATG+GGG + chr8_1:18602259-18602278 Msa1183360:CDS 40.0%
! TTTTTCCGATCAGGCTCTTA+TGG + chr8_1:18602389-18602408 Msa1183360:intron 40.0%
TCTTATGGCGGTAATGATGT+TGG + chr8_1:18602404-18602423 Msa1183360:CDS 40.0%
ATTGTTCCTGTGATGTAGGT+TGG + chr8_1:18602546-18602565 Msa1183360:intron 40.0%
GGTTCGGGATCTTATTATTG+AGG + chr8_1:18602639-18602658 Msa1183360:CDS 40.0%
! GCATCTCTTATCTTTTCGCA+AGG + chr8_1:18602766-18602785 Msa1183360:intron 40.0%
! TCTTATCTTTTCGCAAGGGA+TGG + chr8_1:18602771-18602790 Msa1183360:intron 40.0%
AATTGGCTGCAATAGGATGA+CGG + chr8_1:18602852-18602871 Msa1183360:three_prime_UTR 40.0%
GGGAACTTGTCGCAAAAATT+AGG + chr8_1:18602950-18602969 Msa1183360:three_prime_UTR 40.0%
TGGTCTCTGTCCAAATGAAA+TGG - chr8_1:18603165-18603184 None:intergenic 40.0%
TTTCATTTGGACAGAGACCA+AGG + chr8_1:18603165-18603184 Msa1183360:three_prime_UTR 40.0%
GTGTTGTAGGATTTGTGACA+TGG + chr8_1:18603427-18603446 Msa1183360:three_prime_UTR 40.0%
!! TTTGAGTTTTTGTCCTGAGG+TGG + chr8_1:18603515-18603534 Msa1183360:three_prime_UTR 40.0%
TGCAGAAGCTAAAGATTCTG+TGG - chr8_1:18603674-18603693 None:intergenic 40.0%
! CTTTAGCTTCTGCATTGTAG+TGG + chr8_1:18603680-18603699 Msa1183360:three_prime_UTR 40.0%
TAAATCAAGCTAGGTAGGGT+GGG - chr8_1:18603787-18603806 None:intergenic 40.0%
GCTTGATTTAGAAAAGCTCG+GGG + chr8_1:18603797-18603816 Msa1183360:three_prime_UTR 40.0%
CTCAAGACAACCAACAATGT+GGG - chr8_1:18603922-18603941 None:intergenic 40.0%
ACTCAAGACAACCAACAATG+TGG - chr8_1:18603923-18603942 None:intergenic 40.0%
AGACAACCAACGATATGGTT+CGG - chr8_1:18603967-18603986 None:intergenic 40.0%
ACTCAAGACAACCAACGATA+TGG - chr8_1:18603972-18603991 None:intergenic 40.0%
AGTATACATCTTGAAGGAGG+AGG + chr8_1:18604026-18604045 Msa1183360:three_prime_UTR 40.0%
!! GTCTTCGGAGGCATTGTTAT+TGG - chr8_1:18598254-18598273 None:intergenic 45.0%
ATCACCGTCTTCTCTTCAAC+AGG - chr8_1:18598377-18598396 None:intergenic 45.0%
CGTTGTTGAGGAAAAACCTG+TGG + chr8_1:18598427-18598446 Msa1183360:CDS 45.0%
TGTTGAGGAAAAACCTGTGG+TGG + chr8_1:18598430-18598449 Msa1183360:CDS 45.0%
GGATTATCTTCTTCCACCAC+AGG - chr8_1:18598446-18598465 None:intergenic 45.0%
TTAGCATCTTCTACAGCCTC+AGG - chr8_1:18598509-18598528 None:intergenic 45.0%
AGTTTCTTTGACAACCGCCA+TGG + chr8_1:18599137-18599156 Msa1183360:intron 45.0%
!!! CAACCGCCATGGTGTTTTTT+TGG + chr8_1:18599148-18599167 Msa1183360:intron 45.0%
TGTCCGCCAAAAAAACACCA+TGG - chr8_1:18599157-18599176 None:intergenic 45.0%
! TTGGCGGACATAGCAAAAGA+AGG + chr8_1:18599167-18599186 Msa1183360:intron 45.0%
TGATCCTGAGTATGAACCTG+AGG + chr8_1:18599413-18599432 Msa1183360:CDS 45.0%
TACTCCTCAGGTTCATACTC+AGG - chr8_1:18599420-18599439 None:intergenic 45.0%
GAGTATGAACCTGAGGAGTA+TGG + chr8_1:18599420-18599439 Msa1183360:CDS 45.0%
! TATGAACCTGAGGAGTATGG+TGG + chr8_1:18599423-18599442 Msa1183360:CDS 45.0%
! ATGAACCTGAGGAGTATGGT+GGG + chr8_1:18599424-18599443 Msa1183360:CDS 45.0%
TGGGGTTGACTATGATGAGA+AGG + chr8_1:18599443-18599462 Msa1183360:CDS 45.0%
! GTTGGTGAAGAAGGTGATTC+AGG + chr8_1:18599528-18599547 Msa1183360:CDS 45.0%
GGAACATCGTGAAGTTGTGA+AGG + chr8_1:18599662-18599681 Msa1183360:CDS 45.0%
ATCGTGAAGTTGTGAAGGAG+AGG + chr8_1:18599667-18599686 Msa1183360:CDS 45.0%
CTTCAGTAGCATCCTTGTCT+AGG - chr8_1:18599728-18599747 None:intergenic 45.0%
! AGGAAGGTTTTCGGTGAAGT+TGG + chr8_1:18599756-18599775 Msa1183360:CDS 45.0%
! GGAAGGTTTTCGGTGAAGTT+GGG + chr8_1:18599757-18599776 Msa1183360:CDS 45.0%
! GAAGGTTTTCGGTGAAGTTG+GGG + chr8_1:18599758-18599777 Msa1183360:CDS 45.0%
AGCAGAGCTTAAAAACCCAG+TGG + chr8_1:18599881-18599900 Msa1183360:CDS 45.0%
GGACAGTGATACCCTCTATT+TGG + chr8_1:18600026-18600045 Msa1183360:CDS 45.0%
! GAACTTCTGGTGCCAGTTAA+AGG + chr8_1:18600186-18600205 Msa1183360:intron 45.0%
CCTCTTCTGCAGTCTCTTAA+AGG - chr8_1:18600338-18600357 None:intergenic 45.0%
! CCTTTAAGAGACTGCAGAAG+AGG + chr8_1:18600335-18600354 Msa1183360:CDS 45.0%
CAGAAGAGGGATGTTACGTT+TGG + chr8_1:18600349-18600368 Msa1183360:CDS 45.0%
!! TGGAGTTGATAAGCCTGCAA+AGG + chr8_1:18600369-18600388 Msa1183360:CDS 45.0%
GTTCCAATACCATCAGTGGT+TGG + chr8_1:18600524-18600543 Msa1183360:intron 45.0%
TTGATGCACTTCCTCCTTCA+TGG + chr8_1:18600903-18600922 Msa1183360:CDS 45.0%
TGATGCACTTCCTCCTTCAT+GGG + chr8_1:18600904-18600923 Msa1183360:CDS 45.0%
! AGATGTGCTGACAGCATTAC+TGG + chr8_1:18601058-18601077 Msa1183360:CDS 45.0%
ACTGGTACAGAATTGGGTGA+AGG + chr8_1:18601076-18601095 Msa1183360:CDS 45.0%
TCTTCTTTCAGGCCAAAGTG+AGG + chr8_1:18601171-18601190 Msa1183360:intron 45.0%
CTTCTTTCAGGCCAAAGTGA+GGG + chr8_1:18601172-18601191 Msa1183360:intron 45.0%
TGATAACCTAGCCCTCACTT+TGG - chr8_1:18601186-18601205 None:intergenic 45.0%
AAGTGAGGGCTAGGTTATCA+AGG + chr8_1:18601186-18601205 Msa1183360:CDS 45.0%
TTATCAAGGCCACTTCAGAG+AGG + chr8_1:18601200-18601219 Msa1183360:CDS 45.0%
! CACGACCAACATGTTTTCCA+CGG - chr8_1:18601226-18601245 None:intergenic 45.0%
GTGGAAAACATGTTGGTCGT+GGG + chr8_1:18601225-18601244 Msa1183360:CDS 45.0%
TGGAAAACATGTTGGTCGTG+GGG + chr8_1:18601226-18601245 Msa1183360:CDS 45.0%
ATTATTGCAGATCCGCGACT+CGG - chr8_1:18601260-18601279 None:intergenic 45.0%
GCGGATCTGCAATAATGTCA+AGG + chr8_1:18601264-18601283 Msa1183360:CDS 45.0%
!! CTAGCACTGATAGACCTGAT+TGG - chr8_1:18601365-18601384 None:intergenic 45.0%
TCATAAGATCTAGCTGGAGG+AGG - chr8_1:18601434-18601453 None:intergenic 45.0%
TCTGCAGCAACTCTACTTCT+TGG - chr8_1:18601617-18601636 None:intergenic 45.0%
! ATAAGTTGGGCGTCTTTCAG+AGG - chr8_1:18601657-18601676 None:intergenic 45.0%
CTGAAAGACGCCCAACTTAT+AGG + chr8_1:18601657-18601676 Msa1183360:CDS 45.0%
TATAGGGATTATCCACCTCG+TGG + chr8_1:18601674-18601693 Msa1183360:CDS 45.0%
! TGGATGATGGTTACAGCCAA+AGG + chr8_1:18601756-18601775 Msa1183360:CDS 45.0%
! GTTACAGCCAAAGGTATGAG+AGG + chr8_1:18601765-18601784 Msa1183360:CDS 45.0%
ACGATAACTTGGATGGGAAG+GGG - chr8_1:18601807-18601826 None:intergenic 45.0%
CACGATAACTTGGATGGGAA+GGG - chr8_1:18601808-18601827 None:intergenic 45.0%
TCACGATAACTTGGATGGGA+AGG - chr8_1:18601809-18601828 None:intergenic 45.0%
TCCCATCCAAGTTATCGTGA+AGG + chr8_1:18601809-18601828 Msa1183360:CDS 45.0%
GTCCTTCACGATAACTTGGA+TGG - chr8_1:18601814-18601833 None:intergenic 45.0%
ACTCCAATCGAGCTCTTGAT+TGG - chr8_1:18602051-18602070 None:intergenic 45.0%
GCTCGATTGGAGTATGACTA+TGG + chr8_1:18602058-18602077 Msa1183360:CDS 45.0%
CGATTGGAGTATGACTATGG+TGG + chr8_1:18602061-18602080 Msa1183360:CDS 45.0%
TCACAGTACGGTGATGCTTA+TGG + chr8_1:18602091-18602110 Msa1183360:CDS 45.0%
ACGGTGATGCTTATGGTGAT+AGG + chr8_1:18602098-18602117 Msa1183360:CDS 45.0%
AGAGTCGGAAGATCTAGTCT+TGG + chr8_1:18602209-18602228 Msa1183360:intron 45.0%
TATGGCGGTAATGATGTTGG+AGG + chr8_1:18602407-18602426 Msa1183360:CDS 45.0%
! GAGATTGGTTGAGAAAGGAC+AGG - chr8_1:18602490-18602509 None:intergenic 45.0%
TCCTTTCTCAACCAATCTCG+AGG + chr8_1:18602491-18602510 Msa1183360:intron 45.0%
! TCCTCGAGATTGGTTGAGAA+AGG - chr8_1:18602495-18602514 None:intergenic 45.0%
AATGTATTCTGGTAGGGGCA+CGG + chr8_1:18602587-18602606 Msa1183360:CDS 45.0%
!! ATGACGGCCTTTGAAGCTTA+TGG + chr8_1:18602868-18602887 Msa1183360:three_prime_UTR 45.0%
ACAAGTAGCATCTCTAGCCT+TGG - chr8_1:18603185-18603204 None:intergenic 45.0%
! GGCTAGAGATGCTACTTGTT+TGG + chr8_1:18603186-18603205 Msa1183360:three_prime_UTR 45.0%
! GTTTTTACAGTGCTGCAGTC+AGG + chr8_1:18603304-18603323 Msa1183360:three_prime_UTR 45.0%
!! TTGGGATGTGTTGGTGTTGT+AGG + chr8_1:18603414-18603433 Msa1183360:three_prime_UTR 45.0%
ATTATCTTGCAGTCCACCTC+AGG - chr8_1:18603531-18603550 None:intergenic 45.0%
TGAATGTACTTCATGCACCC+TGG + chr8_1:18603752-18603771 Msa1183360:three_prime_UTR 45.0%
AAATCAAGCTAGGTAGGGTG+GGG - chr8_1:18603786-18603805 None:intergenic 45.0%
CTAAATCAAGCTAGGTAGGG+TGG - chr8_1:18603788-18603807 None:intergenic 45.0%
AGACAACCAACAATGTGGGT+CGG - chr8_1:18603918-18603937 None:intergenic 45.0%
! TATGGTTCGGGAGTTGGAAA+GGG - chr8_1:18603954-18603973 None:intergenic 45.0%
! ATATGGTTCGGGAGTTGGAA+AGG - chr8_1:18603955-18603974 None:intergenic 45.0%
GACAACCAACGATATGGTTC+GGG - chr8_1:18603966-18603985 None:intergenic 45.0%
! TGGGTTATTACGGACTGACT+TGG + chr8_1:18604234-18604253 Msa1183360:three_prime_UTR 45.0%
GCAAAGCAAACAGAACAGTG+TGG - chr8_1:18604273-18604292 None:intergenic 45.0%
! TGTTTGCTTTGCTGTACTGC+AGG + chr8_1:18604281-18604300 Msa1183360:three_prime_UTR 45.0%
! GTTTGCTTTGCTGTACTGCA+GGG + chr8_1:18604282-18604301 Msa1183360:three_prime_UTR 45.0%
!!! TATTGATTTTTTTTTATATT+TGG + chr8_1:18598669-18598688 Msa1183360:intron 5.0%
!!! ATTGATTTTTTTTTATATTT+GGG + chr8_1:18598670-18598689 Msa1183360:intron 5.0%
GAACCTCTCTTTGGCGTCTT+CGG - chr8_1:18598269-18598288 None:intergenic 50.0%
! AGCGGGTAGTGGTTCAAAGA+GGG + chr8_1:18598289-18598308 Msa1183360:CDS 50.0%
TTGGTTGTGGCAGATTTCGG+TGG + chr8_1:18599113-18599132 Msa1183360:intron 50.0%
CCGCCAAAAAAACACCATGG+CGG - chr8_1:18599154-18599173 None:intergenic 50.0%
!!! CCGCCATGGTGTTTTTTTGG+CGG + chr8_1:18599151-18599170 Msa1183360:intron 50.0%
GAGAGACGAGCGTCTAGATT+TGG + chr8_1:18599383-18599402 Msa1183360:CDS 50.0%
AGACGAGCGTCTAGATTTGG+AGG + chr8_1:18599386-18599405 Msa1183360:CDS 50.0%
! TGAACCTGAGGAGTATGGTG+GGG + chr8_1:18599425-18599444 Msa1183360:CDS 50.0%
TGAACAGGAAGAGGGACATG+AGG + chr8_1:18599470-18599489 Msa1183360:CDS 50.0%
TGAGGTGGGAGATGAAGTTG+AGG + chr8_1:18599488-18599507 Msa1183360:CDS 50.0%
TGAAGAAGGTGATTCAGGCG+AGG + chr8_1:18599533-18599552 Msa1183360:CDS 50.0%
GATGGCTGATGTGGATGAAG+AGG + chr8_1:18599641-18599660 Msa1183360:CDS 50.0%
TTGTGAAGGAGAGGCGAAAG+CGG + chr8_1:18599676-18599695 Msa1183360:CDS 50.0%
! ATTTGTTGGGGGCCTAGACA+AGG + chr8_1:18599713-18599732 Msa1183360:CDS 50.0%
TGAAGTTGGGGTTGTGACTG+AGG + chr8_1:18599770-18599789 Msa1183360:CDS 50.0%
!! ATGTGGTGTTACTCCGAGTC+AGG + chr8_1:18600005-18600024 Msa1183360:CDS 50.0%
! AGGGTATCACTGTCCTGACT+CGG - chr8_1:18600021-18600040 None:intergenic 50.0%
AGGCATCCATTGCATCTGAG+CGG - chr8_1:18600318-18600337 None:intergenic 50.0%
GGGTGTTCAGAATGACACAC+CGG + chr8_1:18600769-18600788 Msa1183360:intron 50.0%
! TCCTTCTAGTGGTTGGTTCC+AGG + chr8_1:18600814-18600833 Msa1183360:intron 50.0%
ACCTGGAACCAACCACTAGA+AGG - chr8_1:18600818-18600837 None:intergenic 50.0%
TAGTCCTTTCTACGAGCAGC+TGG - chr8_1:18601001-18601020 None:intergenic 50.0%
GCTGCTCGTAGAAAGGACTA+TGG + chr8_1:18601001-18601020 Msa1183360:CDS 50.0%
AGAGGCCGTGGAAAACATGT+TGG + chr8_1:18601218-18601237 Msa1183360:CDS 50.0%
CGTGGAAAACATGTTGGTCG+TGG + chr8_1:18601224-18601243 Msa1183360:CDS 50.0%
TTATTGCAGATCCGCGACTC+GGG - chr8_1:18601259-18601278 None:intergenic 50.0%
! GCACTGATAGACCTGATTGG+CGG - chr8_1:18601362-18601381 None:intergenic 50.0%
! GGTAGTGGCCTACTTCTAAC+TGG - chr8_1:18601413-18601432 None:intergenic 50.0%
GCAACTCTACTTCTTGGAGG+TGG - chr8_1:18601611-18601630 None:intergenic 50.0%
GCAGCAACTCTACTTCTTGG+AGG - chr8_1:18601614-18601633 None:intergenic 50.0%
TCAGAGTAGTCAGATCCACG+AGG - chr8_1:18601692-18601711 None:intergenic 50.0%
CAGCACGAGCAGTACTTCTA+GGG - chr8_1:18601718-18601737 None:intergenic 50.0%
TCATCCACGTAACCTCTCCT+AGG - chr8_1:18601743-18601762 None:intergenic 50.0%
AGGAGAGGTTACGTGGATGA+TGG + chr8_1:18601743-18601762 Msa1183360:CDS 50.0%
CGATAACTTGGATGGGAAGG+GGG - chr8_1:18601806-18601825 None:intergenic 50.0%
ATCTTGGGGGAACATCATCC+TGG - chr8_1:18602009-18602028 None:intergenic 50.0%
!! ACCAGTATCGGCGTATCTTG+GGG - chr8_1:18602023-18602042 None:intergenic 50.0%
!! CACCAGTATCGGCGTATCTT+GGG - chr8_1:18602024-18602043 None:intergenic 50.0%
TGATTGGCGAGCACCAGTAT+CGG - chr8_1:18602035-18602054 None:intergenic 50.0%
TCGCCAATCAAGAGCTCGAT+TGG + chr8_1:18602045-18602064 Msa1183360:CDS 50.0%
GGCAGCCGAAGTTCTATTTC+TGG + chr8_1:18602242-18602261 Msa1183360:CDS 50.0%
CACATGGGGTGTATAGCAGT+CGG + chr8_1:18602273-18602292 Msa1183360:CDS 50.0%
TTCCGATCAGGCTCTTATGG+CGG + chr8_1:18602392-18602411 Msa1183360:intron 50.0%
TACCGCCATAAGAGCCTGAT+CGG - chr8_1:18602397-18602416 None:intergenic 50.0%
CTCAACCAATCTCGAGGAGT+CGG + chr8_1:18602497-18602516 Msa1183360:intron 50.0%
! GTTCCTGTGATGTAGGTTGG+TGG + chr8_1:18602549-18602568 Msa1183360:intron 50.0%
! ATGTATTCTGGTAGGGGCAC+GGG + chr8_1:18602588-18602607 Msa1183360:CDS 50.0%
ATGGCGAAGGTTGCACATTG+TGG + chr8_1:18602790-18602809 Msa1183360:intron 50.0%
AGCTATCTCGGGTCTTCTCT+AGG + chr8_1:18602986-18603005 Msa1183360:three_prime_UTR 50.0%
TATCTCGGGTCTTCTCTAGG+TGG + chr8_1:18602989-18603008 Msa1183360:three_prime_UTR 50.0%
ATCTCGGGTCTTCTCTAGGT+GGG + chr8_1:18602990-18603009 Msa1183360:three_prime_UTR 50.0%
GGACTCAAGTTAGTGAGCGA+TGG + chr8_1:18603045-18603064 Msa1183360:three_prime_UTR 50.0%
GCGAAATCGGGAAACTATGC+AGG - chr8_1:18603593-18603612 None:intergenic 50.0%
AATCAAGCTAGGTAGGGTGG+GGG - chr8_1:18603785-18603804 None:intergenic 50.0%
GACAACCAACAATGTGGGTC+GGG - chr8_1:18603917-18603936 None:intergenic 50.0%
! CAACGATATGGTTCGGGAGT+TGG - chr8_1:18603960-18603979 None:intergenic 50.0%
CAACTCCCGAACCATATCGT+TGG + chr8_1:18603958-18603977 Msa1183360:three_prime_UTR 50.0%
! TCACTGGGCGTGGGTTATTA+CGG + chr8_1:18604224-18604243 Msa1183360:three_prime_UTR 50.0%
GACGCCAAAGAGAGGTTCAG+CGG + chr8_1:18598271-18598290 Msa1183360:CDS 55.0%
ACGCCAAAGAGAGGTTCAGC+GGG + chr8_1:18598272-18598291 Msa1183360:CDS 55.0%
CTACCCGCTGAACCTCTCTT+TGG - chr8_1:18598278-18598297 None:intergenic 55.0%
AAGAGAGGTTCAGCGGGTAG+TGG + chr8_1:18598278-18598297 Msa1183360:CDS 55.0%
! CAGCGGGTAGTGGTTCAAAG+AGG + chr8_1:18598288-18598307 Msa1183360:CDS 55.0%
! GCGGGTAGTGGTTCAAAGAG+GGG + chr8_1:18598290-18598309 Msa1183360:CDS 55.0%
! GGTAGTGGTTCAAAGAGGGG+TGG + chr8_1:18598293-18598312 Msa1183360:CDS 55.0%
AGGGGTGGCAGATTATCGAG+AGG + chr8_1:18598308-18598327 Msa1183360:CDS 55.0%
TCAACCCCACCATACTCCTC+AGG - chr8_1:18599432-18599451 None:intergenic 55.0%
ACAGGAAGAGGGACATGAGG+TGG + chr8_1:18599473-18599492 Msa1183360:CDS 55.0%
CAGGAAGAGGGACATGAGGT+GGG + chr8_1:18599474-18599493 Msa1183360:CDS 55.0%
GGCGAGGAAGAAGTCGAAGA+TGG + chr8_1:18599549-18599568 Msa1183360:CDS 55.0%
GGATGACGAGCATGCTGATG+AGG + chr8_1:18599596-18599615 Msa1183360:CDS 55.0%
TTGGGGTTGTGACTGAGGTC+AGG + chr8_1:18599775-18599794 Msa1183360:CDS 55.0%
TTCCTCCCGCTCAGATGCAA+TGG + chr8_1:18600309-18600328 Msa1183360:CDS 55.0%
ATCCATTGCATCTGAGCGGG+AGG - chr8_1:18600314-18600333 None:intergenic 55.0%
GGCATCCATTGCATCTGAGC+GGG - chr8_1:18600317-18600336 None:intergenic 55.0%
CATGCCAGCTGCTCGTAGAA+AGG + chr8_1:18600994-18601013 Msa1183360:CDS 55.0%
AGCAGCATCGTGTGAGCCAA+AGG - chr8_1:18601035-18601054 None:intergenic 55.0%
TTCAGGCCAAAGTGAGGGCT+AGG + chr8_1:18601177-18601196 Msa1183360:intron 55.0%
! TTTCCACGGCCTCTCTGAAG+TGG - chr8_1:18601212-18601231 None:intergenic 55.0%
AGAAACTACGGGGTGCAGGT+CGG - chr8_1:18601304-18601323 None:intergenic 55.0%
TCGCGTGGGGTAAGAGGAAT+TGG + chr8_1:18601326-18601345 Msa1183360:CDS 55.0%
GATCTAGCTGGAGGAGGTAG+TGG - chr8_1:18601428-18601447 None:intergenic 55.0%
GAGTAGTCAGATCCACGAGG+TGG - chr8_1:18601689-18601708 None:intergenic 55.0%
GCAGCACGAGCAGTACTTCT+AGG - chr8_1:18601719-18601738 None:intergenic 55.0%
TGCACCTAGGAGAGGTTACG+TGG + chr8_1:18601736-18601755 Msa1183360:CDS 55.0%
GAGGTGGCCTCTCATACCTT+TGG - chr8_1:18601775-18601794 None:intergenic 55.0%
TAACTTGGATGGGAAGGGGG+TGG - chr8_1:18601803-18601822 None:intergenic 55.0%
GGGCGTCCTTCACGATAACT+TGG - chr8_1:18601818-18601837 None:intergenic 55.0%
AAAACGTTCGTACGCTGCCG+TGG + chr8_1:18601865-18601884 Msa1183360:CDS 55.0%
GGGGGAACATCATCCTGGTT+GGG - chr8_1:18602004-18602023 None:intergenic 55.0%
TGGGGGAACATCATCCTGGT+TGG - chr8_1:18602005-18602024 None:intergenic 55.0%
!! CCAGTATCGGCGTATCTTGG+GGG - chr8_1:18602022-18602041 None:intergenic 55.0%
!! GCACCAGTATCGGCGTATCT+TGG - chr8_1:18602025-18602044 None:intergenic 55.0%
GGTGGCAGTGCTTCACAGTA+CGG + chr8_1:18602079-18602098 Msa1183360:CDS 55.0%
AGTCGGCAGGGCATGAGTTA+TGG + chr8_1:18602290-18602309 Msa1183360:CDS 55.0%
CAGGGCATGAGTTATGGTGG+AGG + chr8_1:18602296-18602315 Msa1183360:CDS 55.0%
GGCGGTGATTACGTTTCTCG+TGG + chr8_1:18602449-18602468 Msa1183360:CDS 55.0%
ACAGTCCGACTCCTCGAGAT+TGG - chr8_1:18602505-18602524 None:intergenic 55.0%
CTGCCACCAACCTACATCAC+AGG - chr8_1:18602555-18602574 None:intergenic 55.0%
! GGTGGCGGTAGCAGTTACAT+GGG + chr8_1:18602609-18602628 Msa1183360:CDS 55.0%
GGTAGCAGTTACATGGGCAG+CGG + chr8_1:18602615-18602634 Msa1183360:CDS 55.0%
TTACATGGGCAGCGGTGGTT+CGG + chr8_1:18602623-18602642 Msa1183360:CDS 55.0%
! CTTTTCGCAAGGGATGGCGA+AGG + chr8_1:18602777-18602796 Msa1183360:intron 55.0%
ATCAAGCTAGGTAGGGTGGG+GGG - chr8_1:18603784-18603803 None:intergenic 55.0%
CAACAATGTGGGTCGGGAGT+TGG - chr8_1:18603911-18603930 None:intergenic 55.0%
CAACTCCCGACCCACATTGT+TGG + chr8_1:18603909-18603928 Msa1183360:three_prime_UTR 55.0%
CCTCTCTTTGGCGTCTTCGG+AGG - chr8_1:18598266-18598285 None:intergenic 60.0%
CCTCCGAAGACGCCAAAGAG+AGG + chr8_1:18598263-18598282 Msa1183360:CDS 60.0%
GACGAGAAACTACGGGGTGC+AGG - chr8_1:18601308-18601327 None:intergenic 60.0%
CCACGCGACGAGAAACTACG+GGG - chr8_1:18601314-18601333 None:intergenic 60.0%
CCCACGCGACGAGAAACTAC+GGG - chr8_1:18601315-18601334 None:intergenic 60.0%
CCCGTAGTTTCTCGTCGCGT+GGG + chr8_1:18601312-18601331 Msa1183360:CDS 60.0%
CCCCACGCGACGAGAAACTA+CGG - chr8_1:18601316-18601335 None:intergenic 60.0%
CCGTAGTTTCTCGTCGCGTG+GGG + chr8_1:18601313-18601332 Msa1183360:CDS 60.0%
TTCTCGTCGCGTGGGGTAAG+AGG + chr8_1:18601320-18601339 Msa1183360:CDS 60.0%
GAAGTCGTGCTCCGCCAATC+AGG + chr8_1:18601348-18601367 Msa1183360:CDS 60.0%
GTACTGCTCGTGCTGCACCT+AGG + chr8_1:18601723-18601742 Msa1183360:CDS 60.0%
CCCCCAAGATACGCCGATAC+TGG + chr8_1:18602019-18602038 Msa1183360:CDS 60.0%
TGGGGTGTATAGCAGTCGGC+AGG + chr8_1:18602277-18602296 Msa1183360:CDS 60.0%
GGGGTGTATAGCAGTCGGCA+GGG + chr8_1:18602278-18602297 Msa1183360:CDS 60.0%
CGGCAGGGCATGAGTTATGG+TGG + chr8_1:18602293-18602312 Msa1183360:CDS 60.0%
! TATTCTGGTAGGGGCACGGG+TGG + chr8_1:18602591-18602610 Msa1183360:CDS 60.0%
! GGGTGGCGGTAGCAGTTACA+TGG + chr8_1:18602608-18602627 Msa1183360:CDS 60.0%
AGCAGTTACATGGGCAGCGG+TGG + chr8_1:18602618-18602637 Msa1183360:CDS 60.0%
TACATGGGCAGCGGTGGTTC+GGG + chr8_1:18602624-18602643 Msa1183360:CDS 60.0%
AGGGTGGGGGGGTAAAACCA+GGG - chr8_1:18603772-18603791 None:intergenic 60.0%
TAGGGTGGGGGGGTAAAACC+AGG - chr8_1:18603773-18603792 None:intergenic 60.0%
TCAAGCTAGGTAGGGTGGGG+GGG - chr8_1:18603783-18603802 None:intergenic 60.0%
GGAGCATGACCGTGAGCGTG+CGG + chr8_1:18599617-18599636 Msa1183360:CDS 65.0%
TGACCGTGAGCGTGCGGAGA+TGG + chr8_1:18599623-18599642 Msa1183360:CDS 65.0%
CAGCCATCTCCGCACGCTCA+CGG - chr8_1:18599629-18599648 None:intergenic 65.0%
GCGTGCGGAGATGGCTGATG+TGG + chr8_1:18599632-18599651 Msa1183360:CDS 65.0%
AGGCCACTTCAGAGAGGCCG+TGG + chr8_1:18601206-18601225 Msa1183360:CDS 65.0%
GCAGGTCGGCTGCTCCAAGA+AGG - chr8_1:18601290-18601309 None:intergenic 65.0%
CCCCGTAGTTTCTCGTCGCG+TGG + chr8_1:18601311-18601330 Msa1183360:CDS 65.0%
GCTCGTGCTGCACCTAGGAG+AGG + chr8_1:18601728-18601747 Msa1183360:CDS 65.0%
CTTGGATGGGAAGGGGGTGG+AGG - chr8_1:18601800-18601819 None:intergenic 65.0%
GGGGACTATCGCCCGAGTCG+CGG + chr8_1:18601245-18601264 Msa1183360:CDS 70.0%
GAAGGGGGTGGAGGAGGAGG+TGG - chr8_1:18601791-18601810 None:intergenic 70.0%
TGGGAAGGGGGTGGAGGAGG+AGG - chr8_1:18601794-18601813 None:intergenic 70.0%
GGATGGGAAGGGGGTGGAGG+AGG - chr8_1:18601797-18601816 None:intergenic 70.0%
! TCTGGTAGGGGCACGGGTGG+CGG + chr8_1:18602594-18602613 Msa1183360:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 18598122 18604554 18598122 ID=Msa1183360;Name=Msa1183360
chr8_1 mRNA 18598122 18604554 18598122 ID=Msa1183360-mRNA-1;Parent=Msa1183360;Name=Msa1183360-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|1|1|1|0.90|0.83|12|1717|846
chr8_1 exon 18598122 18598539 18598122 ID=Msa1183360-mRNA-1:exon:7125;Parent=Msa1183360-mRNA-1
chr8_1 exon 18599343 18599902 18599343 ID=Msa1183360-mRNA-1:exon:7126;Parent=Msa1183360-mRNA-1
chr8_1 exon 18599991 18600080 18599991 ID=Msa1183360-mRNA-1:exon:7127;Parent=Msa1183360-mRNA-1
chr8_1 exon 18600202 18600441 18600202 ID=Msa1183360-mRNA-1:exon:7128;Parent=Msa1183360-mRNA-1
chr8_1 exon 18600887 18601108 18600887 ID=Msa1183360-mRNA-1:exon:7129;Parent=Msa1183360-mRNA-1
chr8_1 exon 18601182 18601467 18601182 ID=Msa1183360-mRNA-1:exon:7130;Parent=Msa1183360-mRNA-1
chr8_1 exon 18601552 18601886 18601552 ID=Msa1183360-mRNA-1:exon:7131;Parent=Msa1183360-mRNA-1
chr8_1 exon 18602010 18602119 18602010 ID=Msa1183360-mRNA-1:exon:7132;Parent=Msa1183360-mRNA-1
chr8_1 exon 18602211 18602317 18602211 ID=Msa1183360-mRNA-1:exon:7133;Parent=Msa1183360-mRNA-1
chr8_1 exon 18602402 18602478 18602402 ID=Msa1183360-mRNA-1:exon:7134;Parent=Msa1183360-mRNA-1
chr8_1 exon 18602564 18602660 18602564 ID=Msa1183360-mRNA-1:exon:7135;Parent=Msa1183360-mRNA-1
chr8_1 exon 18602839 18604554 18602839 ID=Msa1183360-mRNA-1:exon:7136;Parent=Msa1183360-mRNA-1
chr8_1 CDS 18598122 18598539 18598122 ID=Msa1183360-mRNA-1:cds;Parent=Msa1183360-mRNA-1
chr8_1 CDS 18599343 18599902 18599343 ID=Msa1183360-mRNA-1:cds;Parent=Msa1183360-mRNA-1
chr8_1 CDS 18599991 18600080 18599991 ID=Msa1183360-mRNA-1:cds;Parent=Msa1183360-mRNA-1
chr8_1 CDS 18600202 18600441 18600202 ID=Msa1183360-mRNA-1:cds;Parent=Msa1183360-mRNA-1
chr8_1 CDS 18600887 18601108 18600887 ID=Msa1183360-mRNA-1:cds;Parent=Msa1183360-mRNA-1
chr8_1 CDS 18601182 18601467 18601182 ID=Msa1183360-mRNA-1:cds;Parent=Msa1183360-mRNA-1
chr8_1 CDS 18601552 18601886 18601552 ID=Msa1183360-mRNA-1:cds;Parent=Msa1183360-mRNA-1
chr8_1 CDS 18602010 18602119 18602010 ID=Msa1183360-mRNA-1:cds;Parent=Msa1183360-mRNA-1
chr8_1 CDS 18602211 18602317 18602211 ID=Msa1183360-mRNA-1:cds;Parent=Msa1183360-mRNA-1
chr8_1 CDS 18602402 18602478 18602402 ID=Msa1183360-mRNA-1:cds;Parent=Msa1183360-mRNA-1
chr8_1 CDS 18602564 18602659 18602564 ID=Msa1183360-mRNA-1:cds;Parent=Msa1183360-mRNA-1
chr8_1 three_prime_UTR 18602660 18602660 18602660 ID=Msa1183360-mRNA-1:three_prime_utr;Parent=Msa1183360-mRNA-1
chr8_1 three_prime_UTR 18602839 18604554 18602839 ID=Msa1183360-mRNA-1:three_prime_utr;Parent=Msa1183360-mRNA-1
Gene Sequence

>Msa1183360

GGTTTTGCGTTTTTCTTATTCTACGTTATTCGATTCCCAATTCTCTCTCAAAAATTTAGGGTTTCACTTTCAAAATCGATTTCAATCGAATTTTGCGATCCACAAAGAAATTTAGGGTTTCGATTCATTCCAATAACAATGCCTCCGAAGACGCCAAAGAGAGGTTCAGCGGGTAGTGGTTCAAAGAGGGGTGGCAGATTATCGAGAGGAACTGCGAAATCTGCACAGAATCAACAACAACAGCAATCTGAACCTGTTGAAGAGAAGACGGTGATTGAAGAAGAGATCAAGGTAGAAGAGAATCTCGTTGTTGAGGAAAAACCTGTGGTGGAAGAAGATAATCCTGTTGTTGAAGATAAAGCTATTGATATGAATCAAATTGCTCCTGAGGCTGTAGAAGATGCTAATCTAGCCAAAAAAGATGAAGAGGAGGTTAAGGAGTCTATAGATGAATATGAGAGAGACGAGCGTCTAGATTTGGAGGATAATGATCCTGAGTATGAACCTGAGGAGTATGGTGGGGTTGACTATGATGAGAAGGAAATTGAACAGGAAGAGGGACATGAGGTGGGAGATGAAGTTGAGGAAGAACCTGAAGAAAATGTTGGTGAAGAAGGTGATTCAGGCGAGGAAGAAGTCGAAGATGGTCATGATGAAATTGAGGGAGAAGAGGATGACGAGCATGCTGATGAGGAGCATGACCGTGAGCGTGCGGAGATGGCTGATGTGGATGAAGAGGAACATCGTGAAGTTGTGAAGGAGAGGCGAAAGCGGAAAGAATTTGAAGTATTTGTTGGGGGCCTAGACAAGGATGCTACTGAAGATGATCTGAGGAAGGTTTTCGGTGAAGTTGGGGTTGTGACTGAGGTCAGGCTGATGATGAATCCTCAGACAAAAAAGAACAAGGGATTTGCATTCTTGCGGTTTGAAAATGTGGAACAAGCAAAACGAGCTGTAGCAGAGCTTAAAAACCCAGTGATTAATGGAAAACAATGTGGTGTTACTCCGAGTCAGGACAGTGATACCCTCTATTTGGGAAACATATGCAAAACATGGACAAAGGAAGCTTTAAAGGAGAAGTTGAAGCATTATGGAGTTACAAATGTTGAGGATATAACTTTGGTAGAAGATTCTAATGATAAAGGAACAAACCGTGGATTTGCATTCTTGGAATTTTCCTCCCGCTCAGATGCAATGGATGCCTTTAAGAGACTGCAGAAGAGGGATGTTACGTTTGGAGTTGATAAGCCTGCAAAGGTTTCATTTGCAGATTCTTTTATTGACCCGGGTGATGAAATTATGTCACAGGTTAAAACTGTATTTATTGATGCACTTCCTCCTTCATGGGATGAAGATTATGTCCGGAATCTTCTGAAGAAATATGGCGAGGTTGAAAAGATTGAGCTTGCAAGGAACATGCCAGCTGCTCGTAGAAAGGACTATGGATTTGTTACCTTTGGCTCACACGATGCTGCTATAAGATGTGCTGACAGCATTACTGGTACAGAATTGGGTGAAGGTGACAAAAAGGCCAAAGTGAGGGCTAGGTTATCAAGGCCACTTCAGAGAGGCCGTGGAAAACATGTTGGTCGTGGGGACTATCGCCCGAGTCGCGGATCTGCAATAATGTCAAGGCCTTCTTGGAGCAGCCGACCTGCACCCCGTAGTTTCTCGTCGCGTGGGGTAAGAGGAATTGGAAGTCGTGCTCCGCCAATCAGGTCTATCAGTGCTAGAGATAGACGCCCTGTCATGTCTATACCAGTTAGAAGTAGGCCACTACCTCCTCCAGCTAGATCTTATGATAGAAGACCAGCTGATGCTGCATATTCAAAAAGCAGTGTGAAGAGAGATTATGGTCGGCGTGATGATCTACCACCTCCAAGAAGTAGAGTTGCTGCAGATTATGGATCAAGGATGACCTCTGAAAGACGCCCAACTTATAGGGATTATCCACCTCGTGGATCTGACTACTCTGATCTCCCTAGAAGTACTGCTCGTGCTGCACCTAGGAGAGGTTACGTGGATGATGGTTACAGCCAAAGGTATGAGAGGCCACCTCCTCCTCCACCCCCTTCCCATCCAAGTTATCGTGAAGGACGCCCTCGTGATTATGATTCTCTATCTGGCTCAAAACGTTCGTACGCTGCCGTGGATGATGTTCCCCCAAGATACGCCGATACTGGTGCTCGCCAATCAAGAGCTCGATTGGAGTATGACTATGGTGGCAGTGCTTCACAGTACGGTGATGCTTATGGTGATAGAGTCGGAAGATCTAGTCTTGGATATGGTAGTGGCAGCCGAAGTTCTATTTCTGGTCAAGATTCACATGGGGTGTATAGCAGTCGGCAGGGCATGAGTTATGGTGGAGGCTCTTATGGCGGTAATGATGTTGGAGGCATGTATTCATCAAGTTATGGCGGTGATTACGTTTCTCGTGGAAATGATGTTGGTGGCAGCTCATATTCATCAATGTATTCTGGTAGGGGCACGGGTGGCGGTAGCAGTTACATGGGCAGCGGTGGTTCGGGATCTTATTATTGA
Protein sequence

>Msa1183360

GFAFFLFYVIRFPILSQKFRVSLSKSISIEFCDPQRNLGFRFIPITMPPKTPKRGSAGSGSKRGGRLSRGTAKSAQNQQQQQSEPVEEKTVIEEEIKVEENLVVEEKPVVEEDNPVVEDKAIDMNQIAPEAVEDANLAKKDEEEVKESIDEYERDERLDLEDNDPEYEPEEYGGVDYDEKEIEQEEGHEVGDEVEEEPEENVGEEGDSGEEEVEDGHDEIEGEEDDEHADEEHDRERAEMADVDEEEHREVVKERRKRKEFEVFVGGLDKDATEDDLRKVFGEVGVVTEVRLMMNPQTKKNKGFAFLRFENVEQAKRAVAELKNPVINGKQCGVTPSQDSDTLYLGNICKTWTKEALKEKLKHYGVTNVEDITLVEDSNDKGTNRGFAFLEFSSRSDAMDAFKRLQKRDVTFGVDKPAKVSFADSFIDPGDEIMSQVKTVFIDALPPSWDEDYVRNLLKKYGEVEKIELARNMPAARRKDYGFVTFGSHDAAIRCADSITGTELGEGDKKAKVRARLSRPLQRGRGKHVGRGDYRPSRGSAIMSRPSWSSRPAPRSFSSRGVRGIGSRAPPIRSISARDRRPVMSIPVRSRPLPPPARSYDRRPADAAYSKSSVKRDYGRRDDLPPPRSRVAADYGSRMTSERRPTYRDYPPRGSDYSDLPRSTARAAPRRGYVDDGYSQRYERPPPPPPPSHPSYREGRPRDYDSLSGSKRSYAAVDDVPPRYADTGARQSRARLEYDYGGSASQYGDAYGDRVGRSSLGYGSGSRSSISGQDSHGVYSSRQGMSYGGGSYGGNDVGGMYSSSYGGDYVSRGNDVGGSSYSSMYSGRGTGGGSSYMGSGGSGSYY*