Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1342410 | XP_003600480.1 | 99.785 | 465 | 1 | 0 | 1 | 465 | 1 | 465 | 0.0 | 946 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1342410 | sp|Q9DE27|RUVB2_XENLA | 77.384 | 451 | 101 | 1 | 1 | 451 | 4 | 453 | 0.0 | 744 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1342410 | G7J268 | 99.785 | 465 | 1 | 0 | 1 | 465 | 1 | 465 | 0.0 | 946 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001450 | Msa1342410 | 0.845325 | 4.357249e-59 | -8.615850e-47 |
| Msa0003720 | Msa1342410 | 0.827927 | 1.193784e-54 | -8.615850e-47 |
| Msa0020390 | Msa1342410 | 0.814765 | 1.303933e-51 | -8.615850e-47 |
| Msa0027230 | Msa1342410 | 0.823959 | 1.045703e-53 | -8.615850e-47 |
| Msa0027260 | Msa1342410 | 0.825524 | 4.472940e-54 | -8.615850e-47 |
| Msa0029630 | Msa1342410 | 0.865333 | 6.370037e-65 | -8.615850e-47 |
| Msa0037770 | Msa1342410 | 0.821367 | 4.192073e-53 | -8.615850e-47 |
| Msa0047160 | Msa1342410 | 0.828813 | 7.297630e-55 | -8.615850e-47 |
| Msa0056470 | Msa1342410 | 0.812364 | 4.399242e-51 | -8.615850e-47 |
| Msa0059040 | Msa1342410 | 0.827147 | 1.836535e-54 | -8.615850e-47 |
| Msa0059110 | Msa1342410 | 0.847929 | 8.471808e-60 | -8.615850e-47 |
| Msa0061080 | Msa1342410 | 0.816897 | 4.364113e-52 | -8.615850e-47 |
| Msa0075500 | Msa1342410 | 0.808745 | 2.663052e-50 | -8.615850e-47 |
| Msa0079920 | Msa1342410 | 0.857409 | 1.665222e-62 | -8.615850e-47 |
| Msa0090360 | Msa1342410 | 0.818261 | 2.149400e-52 | -8.615850e-47 |
| Msa0090520 | Msa1342410 | 0.816357 | 5.766519e-52 | -8.615850e-47 |
| Msa0091560 | Msa1342410 | 0.805571 | 1.251661e-49 | -8.615850e-47 |
| Msa0094470 | Msa1342410 | 0.841404 | 4.849245e-58 | -8.615850e-47 |
| Msa0100740 | Msa1342410 | 0.828065 | 1.105523e-54 | -8.615850e-47 |
| Msa0105370 | Msa1342410 | 0.827639 | 1.400144e-54 | -8.615850e-47 |
| Msa0105620 | Msa1342410 | 0.815473 | 9.081802e-52 | -8.615850e-47 |
| Msa0115130 | Msa1342410 | 0.809971 | 1.453180e-50 | -8.615850e-47 |
| Msa0118590 | Msa1342410 | 0.801011 | 1.101193e-48 | -8.615850e-47 |
| Msa0119900 | Msa1342410 | 0.802325 | 5.919795e-49 | -8.615850e-47 |
| Msa0610390 | Msa1342410 | 0.800101 | 1.687657e-48 | -8.615850e-47 |
| Msa0610790 | Msa1342410 | 0.810441 | 1.151135e-50 | -8.615850e-47 |
| Msa0615490 | Msa1342410 | 0.829555 | 4.820161e-55 | -8.615850e-47 |
| Msa0615580 | Msa1342410 | 0.840328 | 9.289307e-58 | -8.615850e-47 |
| Msa0615710 | Msa1342410 | 0.825700 | 4.062550e-54 | -8.615850e-47 |
| Msa0617170 | Msa1342410 | 0.803217 | 3.872643e-49 | -8.615850e-47 |
| Msa0642970 | Msa1342410 | 0.814035 | 1.891531e-51 | -8.615850e-47 |
| Msa0643570 | Msa1342410 | 0.809385 | 1.941913e-50 | -8.615850e-47 |
| Msa0650920 | Msa1342410 | 0.809026 | 2.318521e-50 | -8.615850e-47 |
| Msa0661300 | Msa1342410 | 0.840017 | 1.119750e-57 | -8.615850e-47 |
| Msa0666230 | Msa1342410 | 0.802679 | 5.002956e-49 | -8.615850e-47 |
| Msa0672550 | Msa1342410 | 0.839277 | 1.745062e-57 | -8.615850e-47 |
| Msa0677530 | Msa1342410 | 0.814869 | 1.236787e-51 | -8.615850e-47 |
| Msa0682680 | Msa1342410 | 0.810931 | 9.016924e-51 | -8.615850e-47 |
| Msa0683170 | Msa1342410 | 0.829035 | 6.448873e-55 | -8.615850e-47 |
| Msa0689260 | Msa1342410 | 0.805207 | 1.492021e-49 | -8.615850e-47 |
| Msa0689440 | Msa1342410 | 0.819724 | 9.992796e-53 | -8.615850e-47 |
| Msa0692830 | Msa1342410 | 0.805130 | 1.548507e-49 | -8.615850e-47 |
| Msa0692940 | Msa1342410 | 0.808044 | 3.757847e-50 | -8.615850e-47 |
| Msa0692950 | Msa1342410 | 0.804331 | 2.273768e-49 | -8.615850e-47 |
| Msa0698540 | Msa1342410 | 0.853481 | 2.323057e-61 | -8.615850e-47 |
| Msa0701100 | Msa1342410 | 0.802885 | 4.537115e-49 | -8.615850e-47 |
| Msa0708250 | Msa1342410 | 0.816994 | 4.150923e-52 | -8.615850e-47 |
| Msa0711780 | Msa1342410 | 0.828026 | 1.130107e-54 | -8.615850e-47 |
| Msa0727550 | Msa1342410 | 0.824796 | 6.647340e-54 | -8.615850e-47 |
| Msa0752700 | Msa1342410 | 0.843642 | 1.235546e-58 | -8.615850e-47 |
| Msa0763070 | Msa1342410 | 0.803780 | 2.961115e-49 | -8.615850e-47 |
| Msa0765080 | Msa1342410 | 0.801257 | 9.804643e-49 | -8.615850e-47 |
| Msa0768860 | Msa1342410 | 0.820718 | 5.913748e-53 | -8.615850e-47 |
| Msa0768910 | Msa1342410 | 0.821879 | 3.192685e-53 | -8.615850e-47 |
| Msa0790400 | Msa1342410 | 0.806846 | 6.745382e-50 | -8.615850e-47 |
| Msa0794670 | Msa1342410 | 0.820224 | 7.680452e-53 | -8.615850e-47 |
| Msa0794970 | Msa1342410 | 0.861122 | 1.280727e-63 | -8.615850e-47 |
| Msa0806800 | Msa1342410 | 0.802789 | 4.749092e-49 | -8.615850e-47 |
| Msa0816730 | Msa1342410 | 0.837242 | 5.834887e-57 | -8.615850e-47 |
| Msa0830540 | Msa1342410 | 0.807400 | 5.148475e-50 | -8.615850e-47 |
| Msa0831100 | Msa1342410 | 0.853434 | 2.395728e-61 | -8.615850e-47 |
| Msa0831530 | Msa1342410 | 0.815535 | 8.795414e-52 | -8.615850e-47 |
| Msa0122970 | Msa1342410 | 0.834300 | 3.245601e-56 | -8.615850e-47 |
| Msa0125450 | Msa1342410 | 0.857115 | 2.033499e-62 | -8.615850e-47 |
| Msa0125540 | Msa1342410 | 0.844678 | 6.516223e-59 | -8.615850e-47 |
| Msa0127020 | Msa1342410 | 0.831536 | 1.579290e-55 | -8.615850e-47 |
| Msa0128860 | Msa1342410 | 0.821019 | 5.043154e-53 | -8.615850e-47 |
| Msa0137840 | Msa1342410 | 0.814040 | 1.886093e-51 | -8.615850e-47 |
| Msa0137990 | Msa1342410 | 0.814655 | 1.379223e-51 | -8.615850e-47 |
| Msa0140820 | Msa1342410 | 0.825490 | 4.555832e-54 | -8.615850e-47 |
| Msa0146280 | Msa1342410 | 0.839973 | 1.150248e-57 | -8.615850e-47 |
| Msa0149440 | Msa1342410 | 0.815051 | 1.126962e-51 | -8.615850e-47 |
| Msa0159170 | Msa1342410 | 0.836371 | 9.733069e-57 | -8.615850e-47 |
| Msa0169280 | Msa1342410 | 0.832220 | 1.070628e-55 | -8.615850e-47 |
| Msa0174730 | Msa1342410 | 0.821391 | 4.139673e-53 | -8.615850e-47 |
| Msa0177960 | Msa1342410 | 0.807860 | 4.112067e-50 | -8.615850e-47 |
| Msa0183900 | Msa1342410 | 0.815263 | 1.011175e-51 | -8.615850e-47 |
| Msa0184040 | Msa1342410 | 0.823545 | 1.307333e-53 | -8.615850e-47 |
| Msa0187120 | Msa1342410 | 0.814860 | 1.242555e-51 | -8.615850e-47 |
| Msa0188350 | Msa1342410 | 0.828117 | 1.074535e-54 | -8.615850e-47 |
| Msa0199880 | Msa1342410 | 0.830790 | 2.407697e-55 | -8.615850e-47 |
| Msa0202410 | Msa1342410 | 0.830792 | 2.406002e-55 | -8.615850e-47 |
| Msa0204960 | Msa1342410 | 0.809923 | 1.488381e-50 | -8.615850e-47 |
| Msa0212930 | Msa1342410 | 0.817604 | 3.025751e-52 | -8.615850e-47 |
| Msa0226540 | Msa1342410 | 0.867408 | 1.398682e-65 | -8.615850e-47 |
| Msa0231100 | Msa1342410 | 0.817527 | 3.148832e-52 | -8.615850e-47 |
| Msa0233370 | Msa1342410 | 0.818217 | 2.200070e-52 | -8.615850e-47 |
| Msa1225700 | Msa1342410 | 0.803645 | 3.157544e-49 | -8.615850e-47 |
| Msa1234820 | Msa1342410 | 0.802849 | 4.614522e-49 | -8.615850e-47 |
| Msa1245930 | Msa1342410 | 0.811026 | 8.599290e-51 | -8.615850e-47 |
| Msa1251160 | Msa1342410 | 0.821118 | 4.785088e-53 | -8.615850e-47 |
| Msa1254730 | Msa1342410 | 0.801234 | 9.914650e-49 | -8.615850e-47 |
| Msa1259060 | Msa1342410 | 0.818621 | 1.781698e-52 | -8.615850e-47 |
| Msa1264210 | Msa1342410 | 0.831413 | 1.692945e-55 | -8.615850e-47 |
| Msa1265590 | Msa1342410 | 0.814295 | 1.656747e-51 | -8.615850e-47 |
| Msa1265630 | Msa1342410 | 0.833171 | 6.216997e-56 | -8.615850e-47 |
| Msa1274560 | Msa1342410 | 0.802232 | 6.185339e-49 | -8.615850e-47 |
| Msa1275680 | Msa1342410 | 0.809218 | 2.109632e-50 | -8.615850e-47 |
| Msa1293520 | Msa1342410 | 0.804430 | 2.168587e-49 | -8.615850e-47 |
| Msa1294820 | Msa1342410 | 0.808419 | 3.126145e-50 | -8.615850e-47 |
| Msa1302380 | Msa1342410 | 0.861785 | 8.039904e-64 | -8.615850e-47 |
| Msa1327640 | Msa1342410 | 0.800265 | 1.563071e-48 | -8.615850e-47 |
| Msa1331050 | Msa1342410 | -0.827972 | 1.164541e-54 | -8.615850e-47 |
| Msa1332590 | Msa1342410 | 0.879333 | 1.357707e-69 | -8.615850e-47 |
| Msa1335250 | Msa1342410 | 0.832613 | 8.555348e-56 | -8.615850e-47 |
| Msa1342410 | Msa1343290 | 0.838581 | 2.641882e-57 | -8.615850e-47 |
| Msa1342410 | Msa1351540 | 0.848894 | 4.581413e-60 | -8.615850e-47 |
| Msa1342410 | Msa1358250 | 0.806068 | 9.845120e-50 | -8.615850e-47 |
| Msa1342410 | Msa1361660 | 0.824906 | 6.263272e-54 | -8.615850e-47 |
| Msa1342410 | Msa1367590 | 0.820028 | 8.517093e-53 | -8.615850e-47 |
| Msa1342410 | Msa1368120 | 0.808953 | 2.403553e-50 | -8.615850e-47 |
| Msa1342410 | Msa1369690 | 0.804626 | 1.973939e-49 | -8.615850e-47 |
| Msa1342410 | Msa1374060 | 0.843459 | 1.383073e-58 | -8.615850e-47 |
| Msa1342410 | Msa1376650 | 0.831210 | 1.899625e-55 | -8.615850e-47 |
| Msa1342410 | Msa1379760 | 0.815999 | 6.931072e-52 | -8.615850e-47 |
| Msa1342410 | Msa1381350 | 0.872060 | 4.249026e-67 | -8.615850e-47 |
| Msa1342410 | Msa1382560 | 0.817036 | 4.061802e-52 | -8.615850e-47 |
| Msa1342410 | Msa1382780 | 0.822107 | 2.827122e-53 | -8.615850e-47 |
| Msa1342410 | Msa1394290 | 0.834812 | 2.414179e-56 | -8.615850e-47 |
| Msa1342410 | Msa1400580 | 0.828413 | 9.116442e-55 | -8.615850e-47 |
| Msa1342410 | Msa1404410 | 0.839475 | 1.549930e-57 | -8.615850e-47 |
| Msa1342410 | Msa1406070 | 0.814187 | 1.750571e-51 | -8.615850e-47 |
| Msa1342410 | Msa1418340 | 0.815535 | 8.795572e-52 | -8.615850e-47 |
| Msa1342410 | Msa1419870 | 0.861277 | 1.149036e-63 | -8.615850e-47 |
| Msa1342410 | Msa1432420 | 0.801749 | 7.774011e-49 | -8.615850e-47 |
| Msa1342410 | Msa1433390 | 0.816252 | 6.084744e-52 | -8.615850e-47 |
| Msa1342410 | Msa1434090 | 0.803387 | 3.571745e-49 | -8.615850e-47 |
| Msa1342410 | Msa1439550 | 0.828138 | 1.062003e-54 | -8.615850e-47 |
| Msa1342410 | Msa1443300 | 0.817330 | 3.487692e-52 | -8.615850e-47 |
| Msa1342410 | Msa1450720 | 0.847893 | 8.670503e-60 | -8.615850e-47 |
| Msa1342410 | Msa1451160 | 0.822329 | 2.511091e-53 | -8.615850e-47 |
| Msa1342410 | Msa1454680 | 0.805518 | 1.284261e-49 | -8.615850e-47 |
| Msa1342410 | Msa1458290 | 0.813745 | 2.190389e-51 | -8.615850e-47 |
| Msa1342410 | Msa1458810 | 0.806992 | 6.282197e-50 | -8.615850e-47 |
| Msa1342410 | Msa1459960 | 0.807608 | 4.651140e-50 | -8.615850e-47 |
| Msa0369450 | Msa1342410 | 0.822381 | 2.441709e-53 | -8.615850e-47 |
| Msa0380300 | Msa1342410 | 0.834018 | 3.820366e-56 | -8.615850e-47 |
| Msa0382370 | Msa1342410 | 0.815247 | 1.019233e-51 | -8.615850e-47 |
| Msa0385500 | Msa1342410 | 0.811655 | 6.281238e-51 | -8.615850e-47 |
| Msa0387820 | Msa1342410 | 0.835149 | 1.984690e-56 | -8.615850e-47 |
| Msa0388700 | Msa1342410 | 0.861335 | 1.103187e-63 | -8.615850e-47 |
| Msa0398810 | Msa1342410 | 0.809206 | 2.121387e-50 | -8.615850e-47 |
| Msa0403500 | Msa1342410 | 0.800446 | 1.436032e-48 | -8.615850e-47 |
| Msa0437020 | Msa1342410 | 0.805422 | 1.345416e-49 | -8.615850e-47 |
| Msa0443390 | Msa1342410 | 0.836842 | 7.382607e-57 | -8.615850e-47 |
| Msa0445330 | Msa1342410 | 0.801346 | 9.401033e-49 | -8.615850e-47 |
| Msa0449210 | Msa1342410 | 0.808811 | 2.578093e-50 | -8.615850e-47 |
| Msa0456880 | Msa1342410 | 0.805539 | 1.271049e-49 | -8.615850e-47 |
| Msa0462600 | Msa1342410 | 0.807985 | 3.867261e-50 | -8.615850e-47 |
| Msa1008720 | Msa1342410 | 0.812664 | 3.783161e-51 | -8.615850e-47 |
| Msa1019240 | Msa1342410 | 0.833430 | 5.359006e-56 | -8.615850e-47 |
| Msa1019260 | Msa1342410 | 0.841285 | 5.214173e-58 | -8.615850e-47 |
| Msa1021470 | Msa1342410 | 0.814362 | 1.601722e-51 | -8.615850e-47 |
| Msa1029070 | Msa1342410 | 0.829409 | 5.232613e-55 | -8.615850e-47 |
| Msa1037510 | Msa1342410 | 0.806782 | 6.959553e-50 | -8.615850e-47 |
| Msa1039810 | Msa1342410 | 0.802279 | 6.049501e-49 | -8.615850e-47 |
| Msa1041850 | Msa1342410 | 0.805647 | 1.206974e-49 | -8.615850e-47 |
| Msa1051200 | Msa1342410 | 0.809167 | 2.162963e-50 | -8.615850e-47 |
| Msa1060260 | Msa1342410 | 0.817901 | 2.593311e-52 | -8.615850e-47 |
| Msa1072710 | Msa1342410 | 0.830414 | 2.976027e-55 | -8.615850e-47 |
| Msa1078420 | Msa1342410 | 0.801065 | 1.073339e-48 | -8.615850e-47 |
| Msa1080290 | Msa1342410 | 0.807913 | 4.006919e-50 | -8.615850e-47 |
| Msa1081930 | Msa1342410 | 0.829948 | 3.867230e-55 | -8.615850e-47 |
| Msa1083610 | Msa1342410 | 0.836957 | 6.901644e-57 | -8.615850e-47 |
| Msa1089450 | Msa1342410 | 0.820080 | 8.285683e-53 | -8.615850e-47 |
| Msa1091940 | Msa1342410 | 0.808256 | 3.385972e-50 | -8.615850e-47 |
| Msa1104140 | Msa1342410 | 0.819543 | 1.098868e-52 | -8.615850e-47 |
| Msa1104210 | Msa1342410 | 0.840307 | 9.406184e-58 | -8.615850e-47 |
| Msa1106700 | Msa1342410 | 0.854452 | 1.219650e-61 | -8.615850e-47 |
| Msa0242410 | Msa1342410 | 0.820994 | 5.109757e-53 | -8.615850e-47 |
| Msa0244970 | Msa1342410 | 0.801948 | 7.075666e-49 | -8.615850e-47 |
| Msa0244980 | Msa1342410 | 0.805539 | 1.271049e-49 | -8.615850e-47 |
| Msa0245430 | Msa1342410 | 0.816484 | 5.399967e-52 | -8.615850e-47 |
| Msa0253200 | Msa1342410 | 0.822733 | 2.022753e-53 | -8.615850e-47 |
| Msa0256840 | Msa1342410 | 0.838491 | 2.786094e-57 | -8.615850e-47 |
| Msa0257490 | Msa1342410 | 0.814426 | 1.550399e-51 | -8.615850e-47 |
| Msa0262480 | Msa1342410 | 0.801390 | 9.209309e-49 | -8.615850e-47 |
| Msa0275360 | Msa1342410 | 0.814666 | 1.371439e-51 | -8.615850e-47 |
| Msa0280610 | Msa1342410 | 0.803262 | 3.791663e-49 | -8.615850e-47 |
| Msa0281530 | Msa1342410 | 0.856245 | 3.666137e-62 | -8.615850e-47 |
| Msa0292030 | Msa1342410 | 0.823965 | 1.042656e-53 | -8.615850e-47 |
| Msa0295540 | Msa1342410 | 0.807452 | 5.020262e-50 | -8.615850e-47 |
| Msa0296250 | Msa1342410 | 0.817720 | 2.848128e-52 | -8.615850e-47 |
| Msa0296790 | Msa1342410 | 0.807864 | 4.104467e-50 | -8.615850e-47 |
| Msa0300120 | Msa1342410 | 0.801082 | 1.064740e-48 | -8.615850e-47 |
| Msa0304430 | Msa1342410 | 0.854736 | 1.009271e-61 | -8.615850e-47 |
| Msa0307850 | Msa1342410 | 0.828630 | 8.080799e-55 | -8.615850e-47 |
| Msa0317910 | Msa1342410 | 0.831393 | 1.712649e-55 | -8.615850e-47 |
| Msa0317970 | Msa1342410 | 0.814484 | 1.504843e-51 | -8.615850e-47 |
| Msa0320590 | Msa1342410 | 0.866247 | 3.279113e-65 | -8.615850e-47 |
| Msa0321690 | Msa1342410 | 0.808405 | 3.147119e-50 | -8.615850e-47 |
| Msa0322240 | Msa1342410 | 0.814842 | 1.253561e-51 | -8.615850e-47 |
| Msa0326480 | Msa1342410 | 0.801153 | 1.029959e-48 | -8.615850e-47 |
| Msa0330310 | Msa1342410 | 0.844027 | 9.745997e-59 | -8.615850e-47 |
| Msa0348830 | Msa1342410 | 0.801005 | 1.104274e-48 | -8.615850e-47 |
| Msa0351990 | Msa1342410 | 0.843000 | 1.833476e-58 | -8.615850e-47 |
| Msa0357900 | Msa1342410 | 0.801247 | 9.854231e-49 | -8.615850e-47 |
| Msa0363640 | Msa1342410 | 0.813400 | 2.608776e-51 | -8.615850e-47 |
| Msa1119200 | Msa1342410 | 0.812820 | 3.496795e-51 | -8.615850e-47 |
| Msa1123350 | Msa1342410 | 0.823256 | 1.527888e-53 | -8.615850e-47 |
| Msa1126830 | Msa1342410 | 0.891878 | 2.656572e-74 | -8.615850e-47 |
| Msa1127590 | Msa1342410 | 0.814212 | 1.728294e-51 | -8.615850e-47 |
| Msa1128270 | Msa1342410 | 0.832416 | 9.570697e-56 | -8.615850e-47 |
| Msa1128280 | Msa1342410 | 0.822153 | 2.758580e-53 | -8.615850e-47 |
| Msa1128600 | Msa1342410 | 0.875351 | 3.301044e-68 | -8.615850e-47 |
| Msa1130980 | Msa1342410 | 0.819166 | 1.339213e-52 | -8.615850e-47 |
| Msa1137700 | Msa1342410 | 0.830532 | 2.785020e-55 | -8.615850e-47 |
| Msa1148910 | Msa1342410 | 0.834201 | 3.437114e-56 | -8.615850e-47 |
| Msa1156160 | Msa1342410 | 0.828648 | 7.999089e-55 | -8.615850e-47 |
| Msa1160590 | Msa1342410 | 0.840041 | 1.103667e-57 | -8.615850e-47 |
| Msa1165270 | Msa1342410 | 0.821202 | 4.576590e-53 | -8.615850e-47 |
| Msa1165780 | Msa1342410 | 0.864742 | 9.771650e-65 | -8.615850e-47 |
| Msa1165940 | Msa1342410 | 0.845362 | 4.257520e-59 | -8.615850e-47 |
| Msa1165960 | Msa1342410 | 0.813366 | 2.655096e-51 | -8.615850e-47 |
| Msa1174740 | Msa1342410 | 0.804016 | 2.644282e-49 | -8.615850e-47 |
| Msa1174780 | Msa1342410 | 0.818357 | 2.044768e-52 | -8.615850e-47 |
| Msa1183360 | Msa1342410 | 0.805085 | 1.582754e-49 | -8.615850e-47 |
| Msa1190920 | Msa1342410 | 0.811773 | 5.921437e-51 | -8.615850e-47 |
| Msa1201810 | Msa1342410 | 0.802831 | 4.653746e-49 | -8.615850e-47 |
| Msa1202580 | Msa1342410 | 0.806978 | 6.327497e-50 | -8.615850e-47 |
| Msa1208880 | Msa1342410 | 0.822265 | 2.598598e-53 | -8.615850e-47 |
| Msa1209200 | Msa1342410 | 0.836750 | 7.794285e-57 | -8.615850e-47 |
| Msa1209760 | Msa1342410 | 0.814773 | 1.298785e-51 | -8.615850e-47 |
| Msa1211230 | Msa1342410 | -0.827887 | 1.220696e-54 | -8.615850e-47 |
| Msa1211420 | Msa1342410 | -0.829259 | 5.687913e-55 | -8.615850e-47 |
| Msa1217580 | Msa1342410 | 0.835809 | 1.351357e-56 | -8.615850e-47 |
| Msa1218500 | Msa1342410 | 0.819258 | 1.276363e-52 | -8.615850e-47 |
| Msa0488880 | Msa1342410 | 0.801466 | 8.884171e-49 | -8.615850e-47 |
| Msa0491000 | Msa1342410 | 0.803546 | 3.310223e-49 | -8.615850e-47 |
| Msa0493410 | Msa1342410 | 0.841307 | 5.143099e-58 | -8.615850e-47 |
| Msa0506400 | Msa1342410 | 0.808514 | 2.983538e-50 | -8.615850e-47 |
| Msa0512340 | Msa1342410 | 0.844205 | 8.733305e-59 | -8.615850e-47 |
| Msa0524500 | Msa1342410 | 0.866429 | 2.869617e-65 | -8.615850e-47 |
| Msa0542290 | Msa1342410 | 0.827061 | 1.925583e-54 | -8.615850e-47 |
| Msa0547160 | Msa1342410 | 0.820212 | 7.727571e-53 | -8.615850e-47 |
| Msa0556060 | Msa1342410 | 0.881422 | 2.432818e-70 | -8.615850e-47 |
| Msa0581110 | Msa1342410 | 0.892602 | 1.364486e-74 | -8.615850e-47 |
| Msa0581130 | Msa1342410 | 0.817080 | 3.968704e-52 | -8.615850e-47 |
| Msa0581280 | Msa1342410 | 0.828749 | 7.560511e-55 | -8.615850e-47 |
| Msa0584260 | Msa1342410 | 0.808280 | 3.346953e-50 | -8.615850e-47 |
| Msa0588260 | Msa1342410 | 0.813021 | 3.159741e-51 | -8.615850e-47 |
| Msa0588360 | Msa1342410 | 0.801342 | 9.422307e-49 | -8.615850e-47 |
| Msa0602340 | Msa1342410 | 0.812068 | 5.106986e-51 | -8.615850e-47 |
| Msa0876810 | Msa1342410 | 0.806608 | 7.572074e-50 | -8.615850e-47 |
| Msa0880730 | Msa1342410 | 0.816302 | 5.932780e-52 | -8.615850e-47 |
| Msa0881270 | Msa1342410 | 0.832433 | 9.478315e-56 | -8.615850e-47 |
| Msa0883520 | Msa1342410 | 0.813545 | 2.424341e-51 | -8.615850e-47 |
| Msa0892640 | Msa1342410 | 0.825667 | 4.137266e-54 | -8.615850e-47 |
| Msa0898040 | Msa1342410 | 0.810672 | 1.025774e-50 | -8.615850e-47 |
| Msa0913240 | Msa1342410 | 0.803694 | 3.084299e-49 | -8.615850e-47 |
| Msa0932570 | Msa1342410 | 0.822516 | 2.271578e-53 | -8.615850e-47 |
| Msa0944680 | Msa1342410 | 0.832693 | 8.173230e-56 | -8.615850e-47 |
| Msa0958000 | Msa1342410 | 0.832513 | 9.055464e-56 | -8.615850e-47 |
| Msa0970600 | Msa1342410 | 0.815336 | 9.742633e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1342410 | MtrunA17_Chr3g0103451 | 99.785 | 465 | 1 | 0 | 1 | 465 | 1 | 465 | 0.0 | 946 |
| Msa1342410 | MtrunA17_Chr3g0135461 | 44.206 | 466 | 233 | 7 | 1 | 448 | 1 | 457 | 1.52e-127 | 377 |
| Msa1342410 | MtrunA17_Chr6g0459171 | 35.743 | 249 | 113 | 5 | 4 | 237 | 1 | 217 | 1.31e-37 | 137 |
| Msa1342410 | MtrunA17_Chr6g0459181 | 36.406 | 217 | 96 | 3 | 239 | 448 | 27 | 208 | 1.57e-33 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1342410 | AT5G67630.1 | 85.867 | 467 | 62 | 1 | 1 | 463 | 1 | 467 | 0.0 | 805 |
| Msa1342410 | AT3G49830.1 | 79.601 | 451 | 91 | 1 | 1 | 450 | 1 | 451 | 0.0 | 748 |
| Msa1342410 | AT5G22330.1 | 43.791 | 459 | 245 | 5 | 1 | 448 | 1 | 457 | 4.04e-126 | 374 |
Find 151 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAGAACGCAGGGATTTC+TGG | 0.168140 | tig0005557:-46076 | Msa1342410:intron |
| CTGTCTTTCCCTTTCTCTTT+TGG | 0.168943 | tig0005557:+45590 | None:intergenic |
| AGATGTTTCTACACCTATTT+TGG | 0.215981 | tig0005557:+45657 | None:intergenic |
| GTTGGTAGCCACAACTAAAA+TGG | 0.256258 | tig0005557:+45864 | None:intergenic |
| AAGCATTTGTTAACCAAAAT+AGG | 0.257783 | tig0005557:-45670 | Msa1342410:CDS |
| GGATGAAATTCGCAAAATTC+TGG | 0.273264 | tig0005557:-45737 | Msa1342410:CDS |
| ATGGAGACGGTTTATGATTT+GGG | 0.291625 | tig0005557:-48337 | Msa1342410:CDS |
| GGCTATAGGAGTGAGAATTA+AGG | 0.320370 | tig0005557:-48467 | Msa1342410:CDS |
| GTGAAATTCGTGCAGAAGTC+AGG | 0.327601 | tig0005557:-46032 | Msa1342410:CDS |
| GATGGAGACGGTTTATGATT+TGG | 0.333382 | tig0005557:-48338 | Msa1342410:CDS |
| TTGAATTGGATGATATTAAT+CGG | 0.343045 | tig0005557:-45567 | Msa1342410:CDS |
| ATTGCAATTGATAAGGCTTC+AGG | 0.345450 | tig0005557:-48262 | Msa1342410:CDS |
| AAAGGGAAAGACAGTTGAAT+TGG | 0.347244 | tig0005557:-45581 | Msa1342410:CDS |
| CAATACATGTTCAGTGAAAC+AGG | 0.377429 | tig0005557:-45484 | Msa1342410:CDS |
| CTCTATGCGCGTTAGGTCGC+GGG | 0.381377 | tig0005557:+48804 | None:intergenic |
| ATTGATCGTCCGGCGGTGGC+TGG | 0.381879 | tig0005557:-48403 | Msa1342410:CDS |
| GGAGACGGCGCGTGGCTCTA+AGG | 0.387209 | tig0005557:+48735 | None:intergenic |
| CGAATTTCATCCTCAGTGTA+AGG | 0.394218 | tig0005557:+45748 | None:intergenic |
| ACTCCTTTCGCCATGATTGC+TGG | 0.398150 | tig0005557:-48550 | Msa1342410:CDS |
| GGCTGGAGCTGCGGCGAAGA+CGG | 0.399233 | tig0005557:-48386 | Msa1342410:CDS |
| GGCGAGGAGAACAGCGCGTC+CGG | 0.402500 | tig0005557:+48636 | None:intergenic |
| GCTGGAGCTGCGGCGAAGAC+GGG | 0.407291 | tig0005557:-48385 | Msa1342410:CDS |
| TAGATATTGCAATTCAACTT+TGG | 0.407812 | tig0005557:+45285 | None:intergenic |
| TTCATTCCTCAATCGGGCTC+TGG | 0.407946 | tig0005557:-45902 | Msa1342410:CDS |
| CGAATAATAATTTGAGGGTC+TGG | 0.410739 | tig0005557:+45114 | None:intergenic |
| CAGCAATTTATTTCATGATC+CGG | 0.412707 | tig0005557:-45359 | Msa1342410:three_prime_UTR |
| CCACGCGCTCTATGCGCGTT+AGG | 0.424297 | tig0005557:+48797 | None:intergenic |
| AAGATCGACACAGTACTTGA+TGG | 0.429777 | tig0005557:-45518 | Msa1342410:CDS |
| TCTAATCACAGCATCTGCTT+TGG | 0.431645 | tig0005557:-45617 | Msa1342410:CDS |
| GCTCTATGCGCGTTAGGTCG+CGG | 0.432519 | tig0005557:+48803 | None:intergenic |
| ATCAAGGACGGTAAAATTGC+CGG | 0.435900 | tig0005557:-48655 | Msa1342410:CDS |
| CGGCTTTACGAGCGGAGACT+TGG | 0.439804 | tig0005557:+48698 | None:intergenic |
| CGAAGATGATTGAGGCGATT+GGG | 0.440792 | tig0005557:-48312 | Msa1342410:CDS |
| CGTCATGGTTGTGGCGGCGA+TGG | 0.441200 | tig0005557:+48846 | None:intergenic |
| CTCGCCGGTCAGCCAGGTAC+TGG | 0.441713 | tig0005557:-48619 | Msa1342410:CDS |
| CTCTTCTGCAACTCACCATC+AGG | 0.442493 | tig0005557:+48157 | None:intergenic |
| GCGAAGATGATTGAGGCGAT+TGG | 0.445428 | tig0005557:-48313 | Msa1342410:CDS |
| GGGAAGGAGAAGGTGACAAG+TGG | 0.446271 | tig0005557:-48292 | Msa1342410:CDS |
| GTTCTCCTCGCCGGTCAGCC+AGG | 0.456290 | tig0005557:-48625 | Msa1342410:CDS |
| CACTCACACATCCGCGGCCT+CGG | 0.458095 | tig0005557:-48769 | Msa1342410:CDS |
| TGAATTGGATGATATTAATC+GGG | 0.459515 | tig0005557:-45566 | Msa1342410:CDS |
| TCAGGGAAGATTACGAAGCT+TGG | 0.461687 | tig0005557:-48244 | Msa1342410:CDS |
| CAGGGAAGATTACGAAGCTT+GGG | 0.462304 | tig0005557:-48243 | Msa1342410:CDS |
| AGTGAGAATTAAGGAGGAAA+CGG | 0.465530 | tig0005557:-48458 | Msa1342410:CDS |
| GCCGACCATGCCTTCGGAGA+CGG | 0.465787 | tig0005557:+48720 | None:intergenic |
| GAGGAAACGGAGGTGATTGA+AGG | 0.467645 | tig0005557:-48445 | Msa1342410:CDS |
| GTTGAGTAGAGATGATGAGT+AGG | 0.468747 | tig0005557:+45770 | None:intergenic |
| GGCAAAACCGCTATTGCAAT+GGG | 0.477742 | tig0005557:-48598 | Msa1342410:CDS |
| CATTCTCCAGAGCCCGATTG+AGG | 0.480580 | tig0005557:+45896 | None:intergenic |
| CTTCCGAAAAGCTTGTGTTA+AGG | 0.481406 | tig0005557:+48489 | None:intergenic |
| TTGGTAGCCACAACTAAAAT+GGG | 0.483901 | tig0005557:+45865 | None:intergenic |
| GGAAGGAGAAGGTGACAAGT+GGG | 0.485543 | tig0005557:-48291 | Msa1342410:CDS |
| GACTTGGCCGACCATGCCTT+CGG | 0.485767 | tig0005557:+48714 | None:intergenic |
| GTGGCAGAGTGGAAAGAAGA+AGG | 0.488801 | tig0005557:-45991 | Msa1342410:CDS |
| CGCCATTCCCATTGCAATAG+CGG | 0.489903 | tig0005557:+48591 | None:intergenic |
| TAGGCGATCAAGTAGATCAA+TGG | 0.491544 | tig0005557:+45789 | None:intergenic |
| AAGCTCACTACCAGCAATCA+TGG | 0.493183 | tig0005557:+48540 | None:intergenic |
| AGATTGATGTTATTAATAGC+AGG | 0.494305 | tig0005557:-48102 | Msa1342410:intron |
| GACGTTGAAGTCGACGGAGA+TGG | 0.495632 | tig0005557:-48356 | Msa1342410:CDS |
| GTGTGCGCGCTATCTACTAC+AGG | 0.499986 | tig0005557:+48926 | None:intergenic |
| CTGAGGTGAATGAATTTCAC+TGG | 0.506000 | tig0005557:+45428 | None:intergenic |
| ACGAATTTCACCCGTGTCAC+CGG | 0.506863 | tig0005557:+46044 | None:intergenic |
| TGGCAAAACCGCTATTGCAA+TGG | 0.507380 | tig0005557:-48599 | Msa1342410:CDS |
| AGGCGATCAAGTAGATCAAT+GGG | 0.510466 | tig0005557:+45790 | None:intergenic |
| GGATGTGATTGCAATTGATA+AGG | 0.511528 | tig0005557:-48269 | Msa1342410:CDS |
| TCATGTCTACGTCTTCCTCT+TGG | 0.512507 | tig0005557:+45704 | None:intergenic |
| GCCGCAGCTCCAGCCACCGC+CGG | 0.514286 | tig0005557:+48394 | None:intergenic |
| TCAGATTGATCGTCCGGCGG+TGG | 0.514313 | tig0005557:-48407 | Msa1342410:CDS |
| TGAGGTTCAGATTGATCGTC+CGG | 0.515205 | tig0005557:-48413 | Msa1342410:CDS |
| AAGAGTCGAGACCGAGGCCG+CGG | 0.517810 | tig0005557:+48758 | None:intergenic |
| TTTGCCAGTACCTGGCTGAC+CGG | 0.518638 | tig0005557:+48615 | None:intergenic |
| TTGCAATTGATAAGGCTTCA+GGG | 0.528887 | tig0005557:-48261 | Msa1342410:CDS |
| TGTGTACCTCATCAATGAAA+AGG | 0.533089 | tig0005557:+45944 | None:intergenic |
| ACATGACGAATAATAATTTG+AGG | 0.534042 | tig0005557:+45108 | None:intergenic |
| TCCGGCGGTGGCTGGAGCTG+CGG | 0.535910 | tig0005557:-48395 | Msa1342410:CDS |
| TTTGGCATGCCAAAAGAGAA+AGG | 0.542916 | tig0005557:-45599 | Msa1342410:CDS |
| GAGCCACGCGCCGTCTCCGA+AGG | 0.543555 | tig0005557:-48730 | Msa1342410:CDS |
| TGGAGACGGTTTATGATTTG+GGG | 0.546299 | tig0005557:-48336 | Msa1342410:CDS |
| CATGACGAATAATAATTTGA+GGG | 0.548161 | tig0005557:+45109 | None:intergenic |
| TTCACTAGCTATCAATAGAG+TGG | 0.549034 | tig0005557:-45156 | Msa1342410:three_prime_UTR |
| GGAAAGGCAGAGATTGTGCC+TGG | 0.550110 | tig0005557:-45970 | Msa1342410:CDS |
| TCTTGTTAATTTCAGAACGC+AGG | 0.553239 | tig0005557:-46085 | Msa1342410:intron |
| GGTTGTGGCGGCGATGGAGA+TGG | 0.555807 | tig0005557:+48852 | None:intergenic |
| CTTGTTAATTTCAGAACGCA+GGG | 0.556736 | tig0005557:-46084 | Msa1342410:intron |
| AACCGCTATTGCAATGGGAA+TGG | 0.556997 | tig0005557:-48593 | Msa1342410:CDS |
| AACGGAGGTGATTGAAGGTG+AGG | 0.557415 | tig0005557:-48440 | Msa1342410:CDS |
| GGACGCGCTGTTCTCCTCGC+CGG | 0.560307 | tig0005557:-48634 | Msa1342410:CDS |
| CTGGAGCTGCGGCGAAGACG+GGG | 0.560612 | tig0005557:-48384 | Msa1342410:CDS |
| TATAGGAGTGAGAATTAAGG+AGG | 0.560876 | tig0005557:-48464 | Msa1342410:CDS |
| TTGGCATGCCAAAAGAGAAA+GGG | 0.561252 | tig0005557:-45598 | Msa1342410:CDS |
| AAGTTTGTGCAGTGTCCTGA+TGG | 0.565334 | tig0005557:-48172 | Msa1342410:CDS |
| ATGGGAATGGCGAAATCCCT+CGG | 0.565356 | tig0005557:-48580 | Msa1342410:CDS |
| GAAGTCGACGGAGATGGAGA+CGG | 0.565872 | tig0005557:-48350 | Msa1342410:CDS |
| GCCGTCTCCGAAGGCATGGT+CGG | 0.566014 | tig0005557:-48721 | Msa1342410:CDS |
| CCTAACGCGCATAGAGCGCG+TGG | 0.566275 | tig0005557:-48797 | Msa1342410:CDS |
| AGATGCTGTGATTAGATGAA+TGG | 0.566370 | tig0005557:+45624 | None:intergenic |
| CAATTTATTTCATGATCCGG+TGG | 0.569467 | tig0005557:-45356 | Msa1342410:three_prime_UTR |
| ACGCGCCGTCTCCGAAGGCA+TGG | 0.570079 | tig0005557:-48725 | Msa1342410:CDS |
| GTCTCCGCTCGTAAAGCCGC+CGG | 0.573288 | tig0005557:-48694 | Msa1342410:CDS |
| TGGTGAGTTGCAGAAGAGGA+AGG | 0.574351 | tig0005557:-48152 | Msa1342410:CDS |
| GATTGAAGGTGAGGTTGTTG+AGG | 0.575785 | tig0005557:-48431 | Msa1342410:CDS |
| ATGCCTTCGGAGACGGCGCG+TGG | 0.577386 | tig0005557:+48727 | None:intergenic |
| AGAGGCATCACAACTATTCG+AGG | 0.577787 | tig0005557:-45841 | Msa1342410:CDS |
| ATTTCACTGGACCATAGCAT+TGG | 0.578908 | tig0005557:+45441 | None:intergenic |
| CGTTATCCTCCAGATGATCA+AGG | 0.584244 | tig0005557:-48671 | Msa1342410:CDS |
| TACCGTCCTTGATCATCTGG+AGG | 0.584863 | tig0005557:+48665 | None:intergenic |
| TGAAATTCGTGCAGAAGTCA+GGG | 0.588620 | tig0005557:-46031 | Msa1342410:CDS |
| AATAGTTGTGATGCCTCTGT+TGG | 0.588977 | tig0005557:+45846 | None:intergenic |
| GGAACAAATTGACACGAAAG+TGG | 0.589018 | tig0005557:-46010 | Msa1342410:CDS |
| AGAGTGGAAAGAAGAAGGAA+AGG | 0.593025 | tig0005557:-45986 | Msa1342410:CDS |
| GAGAATTAAGGAGGAAACGG+AGG | 0.595347 | tig0005557:-48455 | Msa1342410:CDS |
| TGAGTTGCAGAAGAGGAAGG+AGG | 0.595760 | tig0005557:-48149 | Msa1342410:CDS |
| TGAGGCGATTGGGAAGGAGA+AGG | 0.596968 | tig0005557:-48302 | Msa1342410:CDS |
| ACAAATTACAAATCCCCACA+TGG | 0.598468 | tig0005557:-45817 | Msa1342410:CDS |
| GAAGGAGAAGGTGACAAGTG+GGG | 0.598656 | tig0005557:-48290 | Msa1342410:CDS |
| AATTTATTTCATGATCCGGT+GGG | 0.600311 | tig0005557:-45355 | Msa1342410:three_prime_UTR |
| AACGCCGGCGGCTTTACGAG+CGG | 0.602307 | tig0005557:+48690 | None:intergenic |
| ATCTACAGCATTCACGTGAG+AGG | 0.604187 | tig0005557:-45267 | Msa1342410:three_prime_UTR |
| GATGATTGAGGCGATTGGGA+AGG | 0.606012 | tig0005557:-48308 | Msa1342410:CDS |
| GGAGACGGTTTATGATTTGG+GGG | 0.606487 | tig0005557:-48335 | Msa1342410:CDS |
| TGAAGACGACACCAATGCTA+TGG | 0.611055 | tig0005557:-45452 | Msa1342410:CDS |
| CTGATGGTGAGTTGCAGAAG+AGG | 0.612555 | tig0005557:-48156 | Msa1342410:CDS |
| AATTACAAAGTCTCGAACTG+AGG | 0.613502 | tig0005557:+45411 | None:intergenic |
| AATTAAGTGCAATGACCCAC+CGG | 0.614027 | tig0005557:+45340 | None:intergenic |
| GTTGCAGAAGAGGAAGGAGG+TGG | 0.615066 | tig0005557:-48146 | Msa1342410:CDS |
| CTACCAGCAATCATGGCGAA+AGG | 0.622667 | tig0005557:+48547 | None:intergenic |
| GATCAATGGGAATCCCATGT+GGG | 0.625545 | tig0005557:+45803 | None:intergenic |
| TTAGTTGTGGCTACCAACAG+AGG | 0.628149 | tig0005557:-45859 | Msa1342410:CDS |
| GGCGATGGAGATGGAGAGAG+TGG | 0.628869 | tig0005557:+48861 | None:intergenic |
| CATCGCCGCCACAACCATGA+CGG | 0.632511 | tig0005557:-48845 | Msa1342410:exon |
| TAGCTCCGTCATGGTTGTGG+CGG | 0.643085 | tig0005557:+48840 | None:intergenic |
| GAAAGGAGTCTCAAGACCGA+GGG | 0.644534 | tig0005557:+48564 | None:intergenic |
| CAGTACCTGGCTGACCGGCG+AGG | 0.645488 | tig0005557:+48620 | None:intergenic |
| CACTGCACAAACTTCACCTG+AGG | 0.646673 | tig0005557:+48181 | None:intergenic |
| CGAAAGGAGTCTCAAGACCG+AGG | 0.650449 | tig0005557:+48563 | None:intergenic |
| TTGACACGAAAGTGGCAGAG+TGG | 0.654228 | tig0005557:-46002 | Msa1342410:CDS |
| GAAGTTGACGTTGAAGTCGA+CGG | 0.656423 | tig0005557:-48362 | Msa1342410:CDS |
| ATCCTCCAGATGATCAAGGA+CGG | 0.657130 | tig0005557:-48667 | Msa1342410:CDS |
| AGATCAATGGGAATCCCATG+TGG | 0.657627 | tig0005557:+45802 | None:intergenic |
| TCATCAATGAAAAGGACACC+AGG | 0.662622 | tig0005557:+45952 | None:intergenic |
| GATCATCTGGAGGATAACGC+CGG | 0.668449 | tig0005557:+48675 | None:intergenic |
| GAAGACGTAGACATGAGTGA+AGG | 0.670929 | tig0005557:-45697 | Msa1342410:CDS |
| ATCAATGGGAATCCCATGTG+GGG | 0.673789 | tig0005557:+45804 | None:intergenic |
| CAAATTACAAATCCCCACAT+GGG | 0.679587 | tig0005557:-45816 | Msa1342410:CDS |
| CTAACGCGCATAGAGCGCGT+GGG | 0.688219 | tig0005557:-48796 | Msa1342410:CDS |
| TCTGGATATCAGATGCCAAG+AGG | 0.689336 | tig0005557:-45719 | Msa1342410:CDS |
| CTAAGGAAGAGTCGAGACCG+AGG | 0.697389 | tig0005557:+48752 | None:intergenic |
| GGAGCACACTCACACATCCG+CGG | 0.702267 | tig0005557:-48775 | Msa1342410:CDS |
| GGTTCAGATTGATCGTCCGG+CGG | 0.711952 | tig0005557:-48410 | Msa1342410:CDS |
| CATCTGGAGGATAACGCCGG+CGG | 0.729769 | tig0005557:+48678 | None:intergenic |
| CTCTACTCAACCTTACACTG+AGG | 0.741639 | tig0005557:-45758 | Msa1342410:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATGAAAAGCAAAAAAA+GGG | + | tig0005557:45981-46000 | None:intergenic | 15.0% |
| !! | AAATTATGAAAAGCAAAAAA+AGG | + | tig0005557:45982-46001 | None:intergenic | 15.0% |
| !!! | AATTATGTTGTTTTTACAAA+TGG | + | tig0005557:46103-46122 | None:intergenic | 15.0% |
| !! | ATATGAAATAAAAACTATAC+AGG | + | tig0005557:46428-46447 | None:intergenic | 15.0% |
| !!! | TTCAAAAAAAAAACATTTTG+GGG | + | tig0005557:46909-46928 | None:intergenic | 15.0% |
| !!! | GTTCAAAAAAAAAACATTTT+GGG | + | tig0005557:46910-46929 | None:intergenic | 15.0% |
| !!! | TGTTCAAAAAAAAAACATTT+TGG | + | tig0005557:46911-46930 | None:intergenic | 15.0% |
| !! | AAATGTTAAGTCATATAAAA+AGG | - | tig0005557:46943-46962 | Msa1342410:intron | 15.0% |
| !!! | TGTTAATTAGCTTTATATTA+AGG | - | tig0005557:46994-47013 | Msa1342410:intron | 15.0% |
| !! | ATTATGAAAAGCAAAAAAAG+GGG | + | tig0005557:45980-45999 | None:intergenic | 20.0% |
| !!! | TTGAAGTTATGTTTGTTTTT+AGG | - | tig0005557:46043-46062 | Msa1342410:CDS | 20.0% |
| !!! | TGAAGTTATGTTTGTTTTTA+GGG | - | tig0005557:46044-46063 | Msa1342410:CDS | 20.0% |
| !!! | TTGATCAGTTCTAAAAAATT+AGG | - | tig0005557:46535-46554 | Msa1342410:intron | 20.0% |
| !!! | TAAGGTAATGTTTGTTTTTA+TGG | - | tig0005557:47012-47031 | Msa1342410:intron | 20.0% |
| !! | CTTCAGAAAAAAGATATTAT+GGG | + | tig0005557:47278-47297 | None:intergenic | 20.0% |
| !! | ACTTCAGAAAAAAGATATTA+TGG | + | tig0005557:47279-47298 | None:intergenic | 20.0% |
| !!! | ACTAATCTAAAACAAATCAT+TGG | + | tig0005557:47367-47386 | None:intergenic | 20.0% |
| !! | GTTAAAAGAAAATCATCATA+TGG | + | tig0005557:47410-47429 | None:intergenic | 20.0% |
| !!! | TTAATAGAAAGTTTTACATC+TGG | + | tig0005557:47850-47869 | None:intergenic | 20.0% |
| !!! | TATTAAATTTTCCAACTTGT+TGG | - | tig0005557:47864-47883 | Msa1342410:intron | 20.0% |
| !! | TTGAATTGGATGATATTAAT+CGG | - | tig0005557:48473-48492 | Msa1342410:CDS | 20.0% |
| ! | AGATTGATGTTATTAATAGC+AGG | - | tig0005557:45938-45957 | Msa1342410:CDS | 25.0% |
| ! | TCTTATAACTTACATGCAAA+CGG | + | tig0005557:46178-46197 | None:intergenic | 25.0% |
| ! | TTGAAATTGAAAACAGCTTA+TGG | - | tig0005557:46243-46262 | Msa1342410:intron | 25.0% |
| ! | CTAATCCAAAATAAATGATG+TGG | + | tig0005557:46400-46419 | None:intergenic | 25.0% |
| ! | CTATACTTCTCAATTGTATT+TGG | + | tig0005557:46490-46509 | None:intergenic | 25.0% |
| !!! | AAATTAGGTTGTTTCTTTGA+TGG | - | tig0005557:46550-46569 | Msa1342410:intron | 25.0% |
| !! | TTTTTGTGATGTGATCATTT+TGG | - | tig0005557:46728-46747 | Msa1342410:intron | 25.0% |
| !!! | AAAAACATTTTGGGGAAAAA+GGG | + | tig0005557:46901-46920 | None:intergenic | 25.0% |
| !!! | AAAAAACATTTTGGGGAAAA+AGG | + | tig0005557:46902-46921 | None:intergenic | 25.0% |
| ! | AGATTATCAATGATGTATGT+AGG | - | tig0005557:47045-47064 | Msa1342410:intron | 25.0% |
| ! | GAAGTTATAGTTTGAGTAAT+TGG | - | tig0005557:46356-46375 | Msa1342410:intron | 25.0% |
| ! | ATAGATCTGTGTCAAAAATT+TGG | - | tig0005557:47452-47471 | Msa1342410:intron | 25.0% |
| !! | TGGTTGTTCTTTTATGTTTT+TGG | - | tig0005557:47472-47491 | Msa1342410:intron | 25.0% |
| !!! | GAATGATTTTAGAGAGAAAA+GGG | + | tig0005557:47824-47843 | None:intergenic | 25.0% |
| !! | AAGCATTTGTTAACCAAAAT+AGG | - | tig0005557:48370-48389 | Msa1342410:CDS | 25.0% |
| ! | TGAATTGGATGATATTAATC+GGG | - | tig0005557:48474-48493 | Msa1342410:CDS | 25.0% |
| ! | TAGATATTGCAATTCAACTT+TGG | + | tig0005557:48758-48777 | None:intergenic | 25.0% |
| ! | CATGACGAATAATAATTTGA+GGG | + | tig0005557:48934-48953 | None:intergenic | 25.0% |
| ! | ACATGACGAATAATAATTTG+AGG | + | tig0005557:48935-48954 | None:intergenic | 25.0% |
| ! | TTTGAGAACGAAAGGTTTTA+GGG | + | tig0005557:45156-45175 | None:intergenic | 30.0% |
| !! | TTTTGAGAACGAAAGGTTTT+AGG | + | tig0005557:45157-45176 | None:intergenic | 30.0% |
| TTGCATAAGTTCTCACATAT+AGG | - | tig0005557:46282-46301 | Msa1342410:intron | 30.0% | |
| TCAAATAAGTGAATCCGAAT+AGG | - | tig0005557:46314-46333 | Msa1342410:intron | 30.0% | |
| AGAGATAATATCGACCTATT+CGG | + | tig0005557:46331-46350 | None:intergenic | 30.0% | |
| ! | AGAAGCCACATCATTTATTT+TGG | - | tig0005557:46392-46411 | Msa1342410:intron | 30.0% |
| ! | ACTCTAGAAGCAAATTAACT+AGG | + | tig0005557:46587-46606 | None:intergenic | 30.0% |
| CTAAATCGTCAAACAAAACT+TGG | + | tig0005557:46626-46645 | None:intergenic | 30.0% | |
| AATTTATACAGACTTGCCAA+TGG | - | tig0005557:46679-46698 | Msa1342410:intron | 30.0% | |
| TATCTTGTGTTTATCCAAAC+AGG | + | tig0005557:47072-47091 | None:intergenic | 30.0% | |
| ACTGTTTCCATAAGTTATCT+TGG | - | tig0005557:47126-47145 | Msa1342410:intron | 30.0% | |
| CTAGTAGAAAAGCTGAAATA+AGG | - | tig0005557:47239-47258 | Msa1342410:intron | 30.0% | |
| TGAAATAAGGCAATCTAAAC+TGG | - | tig0005557:47252-47271 | Msa1342410:intron | 30.0% | |
| ! | TTAACTGTGTGACTTTGAAA+TGG | - | tig0005557:47425-47444 | Msa1342410:intron | 30.0% |
| !! | TAACTGTGTGACTTTGAAAT+GGG | - | tig0005557:47426-47445 | Msa1342410:intron | 30.0% |
| ! | TGTTATCCAAGTTTTCTATG+AGG | - | tig0005557:47533-47552 | Msa1342410:intron | 30.0% |
| GTAAATCCTCATAGAAAACT+TGG | + | tig0005557:47542-47561 | None:intergenic | 30.0% | |
| !!! | CATGATGCTTTATTTTTGTG+AGG | - | tig0005557:47643-47662 | Msa1342410:intron | 30.0% |
| !! | GGAATGATTTTAGAGAGAAA+AGG | + | tig0005557:47825-47844 | None:intergenic | 30.0% |
| ! | TAGAAAGTTTTACATCTGGA+AGG | + | tig0005557:47846-47865 | None:intergenic | 30.0% |
| CAACTTGTAACACAAGAAAA+AGG | + | tig0005557:47909-47928 | None:intergenic | 30.0% | |
| !! | AGATGTTTCTACACCTATTT+TGG | + | tig0005557:48386-48405 | None:intergenic | 30.0% |
| !! | TCGGGTTTACAATTTGTTTT+TGG | - | tig0005557:48492-48511 | Msa1342410:CDS | 30.0% |
| CAGCAATTTATTTCATGATC+CGG | - | tig0005557:48681-48700 | Msa1342410:CDS | 30.0% | |
| AATTTATTTCATGATCCGGT+GGG | - | tig0005557:48685-48704 | Msa1342410:CDS | 30.0% | |
| ! | CAATTCAACTTTGGAAAAAC+AGG | + | tig0005557:48749-48768 | None:intergenic | 30.0% |
| !!! | CGAAAGGTTTTAGGGTTTTA+GGG | + | tig0005557:45148-45167 | None:intergenic | 35.0% |
| !!! | ACGAAAGGTTTTAGGGTTTT+AGG | + | tig0005557:45149-45168 | None:intergenic | 35.0% |
| ! | AAGCCTTAACACAAGCTTTT+CGG | - | tig0005557:45548-45567 | Msa1342410:CDS | 35.0% |
| TATAGGAGTGAGAATTAAGG+AGG | - | tig0005557:45576-45595 | Msa1342410:CDS | 35.0% | |
| AGTGAGAATTAAGGAGGAAA+CGG | - | tig0005557:45582-45601 | Msa1342410:CDS | 35.0% | |
| ATGGAGACGGTTTATGATTT+GGG | - | tig0005557:45703-45722 | Msa1342410:CDS | 35.0% | |
| GGATGTGATTGCAATTGATA+AGG | - | tig0005557:45771-45790 | Msa1342410:CDS | 35.0% | |
| ATTGCAATTGATAAGGCTTC+AGG | - | tig0005557:45778-45797 | Msa1342410:CDS | 35.0% | |
| TTGCAATTGATAAGGCTTCA+GGG | - | tig0005557:45779-45798 | Msa1342410:CDS | 35.0% | |
| AATGGTACCTACATAAACCA+TGG | + | tig0005557:46085-46104 | None:intergenic | 35.0% | |
| !! | GCTGTTTTCATAAGCTATAC+CGG | - | tig0005557:46202-46221 | Msa1342410:intron | 35.0% |
| ACATATTTCCATTAGCTCAC+CGG | + | tig0005557:46224-46243 | None:intergenic | 35.0% | |
| ATGTGAGAACTTATGCAAAC+AGG | + | tig0005557:46280-46299 | None:intergenic | 35.0% | |
| ! | AGTTGTGTGACTTTAGAAAC+TGG | - | tig0005557:46508-46527 | Msa1342410:intron | 35.0% |
| GTTTCCATAAGTTATCTTGG+AGG | - | tig0005557:47129-47148 | Msa1342410:intron | 35.0% | |
| AAGTCCTCCAAGATAACTTA+TGG | + | tig0005557:47136-47155 | None:intergenic | 35.0% | |
| AAGTTATCTTGGAGGACTTA+TGG | - | tig0005557:47137-47156 | Msa1342410:intron | 35.0% | |
| ACGCTAAGAGCAAATTAATC+AGG | + | tig0005557:47503-47522 | None:intergenic | 35.0% | |
| ! | TTTTTGTGAGGTGATCGTTT+TGG | - | tig0005557:47655-47674 | Msa1342410:intron | 35.0% |
| AGCTAAACAAACCAACAAGT+TGG | + | tig0005557:47878-47897 | None:intergenic | 35.0% | |
| CTTGTAACACAAGAAAAAGG+AGG | + | tig0005557:47906-47925 | None:intergenic | 35.0% | |
| TTGTGTTACAAGTTGCTTCT+TGG | - | tig0005557:47914-47933 | Msa1342410:intron | 35.0% | |
| TCTTGTTAATTTCAGAACGC+AGG | - | tig0005557:47955-47974 | Msa1342410:intron | 35.0% | |
| CTTGTTAATTTCAGAACGCA+GGG | - | tig0005557:47956-47975 | Msa1342410:intron | 35.0% | |
| TGTGTACCTCATCAATGAAA+AGG | + | tig0005557:48099-48118 | None:intergenic | 35.0% | |
| ! | AGTGCTTTTCATTCCTCAAT+CGG | - | tig0005557:48131-48150 | Msa1342410:CDS | 35.0% |
| !!! | AATGTCTCCCATTTTAGTTG+TGG | - | tig0005557:48168-48187 | Msa1342410:CDS | 35.0% |
| ! | TTGGTAGCCACAACTAAAAT+GGG | + | tig0005557:48178-48197 | None:intergenic | 35.0% |
| ACAAATTACAAATCCCCACA+TGG | - | tig0005557:48223-48242 | Msa1342410:CDS | 35.0% | |
| CAAATTACAAATCCCCACAT+GGG | - | tig0005557:48224-48243 | Msa1342410:CDS | 35.0% | |
| GGATGAAATTCGCAAAATTC+TGG | - | tig0005557:48303-48322 | Msa1342410:CDS | 35.0% | |
| AGATGCTGTGATTAGATGAA+TGG | + | tig0005557:48419-48438 | None:intergenic | 35.0% | |
| AAAGGGAAAGACAGTTGAAT+TGG | - | tig0005557:48459-48478 | Msa1342410:CDS | 35.0% | |
| CAATACATGTTCAGTGAAAC+AGG | - | tig0005557:48556-48575 | Msa1342410:CDS | 35.0% | |
| AATTACAAAGTCTCGAACTG+AGG | + | tig0005557:48632-48651 | None:intergenic | 35.0% | |
| CAATTTATTTCATGATCCGG+TGG | - | tig0005557:48684-48703 | Msa1342410:CDS | 35.0% | |
| ! | TTCAACTTTGGAAAAACAGG+TGG | + | tig0005557:48746-48765 | None:intergenic | 35.0% |
| TTCACTAGCTATCAATAGAG+TGG | - | tig0005557:48884-48903 | Msa1342410:five_prime_UTR | 35.0% | |
| CGAATAATAATTTGAGGGTC+TGG | + | tig0005557:48929-48948 | None:intergenic | 35.0% | |
| ! | ATCTACTACAGGAGTTTTGC+TGG | + | tig0005557:45106-45125 | None:intergenic | 40.0% |
| !!! | AGTGGAGTTTTGAGAACGAA+AGG | + | tig0005557:45164-45183 | None:intergenic | 40.0% |
| !!! | AGAAAGTTTTAGCTCCGTCA+TGG | + | tig0005557:45212-45231 | None:intergenic | 40.0% |
| ! | TTTTACCGTCCTTGATCATC+TGG | + | tig0005557:45381-45400 | None:intergenic | 40.0% |
| ATCAAGGACGGTAAAATTGC+CGG | - | tig0005557:45385-45404 | Msa1342410:three_prime_UTR | 40.0% | |
| CTTCCGAAAAGCTTGTGTTA+AGG | + | tig0005557:45554-45573 | None:intergenic | 40.0% | |
| ! | CTTAACACAAGCTTTTCGGA+AGG | - | tig0005557:45552-45571 | Msa1342410:CDS | 40.0% |
| GGCTATAGGAGTGAGAATTA+AGG | - | tig0005557:45573-45592 | Msa1342410:CDS | 40.0% | |
| GATGGAGACGGTTTATGATT+TGG | - | tig0005557:45702-45721 | Msa1342410:CDS | 40.0% | |
| TGGAGACGGTTTATGATTTG+GGG | - | tig0005557:45704-45723 | Msa1342410:CDS | 40.0% | |
| !! | TCGAGGGATTTTGATGCTAT+GGG | - | tig0005557:45835-45854 | Msa1342410:CDS | 40.0% |
| !! | GGTAAATGAAAGTGCTTCCA+TGG | - | tig0005557:46065-46084 | Msa1342410:CDS | 40.0% |
| AGTGCTTCCATGGTTTATGT+AGG | - | tig0005557:46075-46094 | Msa1342410:intron | 40.0% | |
| TTATACAGACTTGCCAATGG+TGG | - | tig0005557:46682-46701 | Msa1342410:intron | 40.0% | |
| GAATGAGTCAATGACAGCTT+TGG | - | tig0005557:46831-46850 | Msa1342410:intron | 40.0% | |
| TGATGTATGTAGGTCCTGTT+TGG | - | tig0005557:47055-47074 | Msa1342410:intron | 40.0% | |
| ATTGGCTGTAATCTAGCAAG+TGG | - | tig0005557:47312-47331 | Msa1342410:intron | 40.0% | |
| ATCATGCTGCTCAAGACTTA+GGG | + | tig0005557:47629-47648 | None:intergenic | 40.0% | |
| ATCCCAATCTCGACGAAAAA+GGG | + | tig0005557:47691-47710 | None:intergenic | 40.0% | |
| TATCCCAATCTCGACGAAAA+AGG | + | tig0005557:47692-47711 | None:intergenic | 40.0% | |
| TGAAATTCGTGCAGAAGTCA+GGG | - | tig0005557:48009-48028 | Msa1342410:intron | 40.0% | |
| GGAACAAATTGACACGAAAG+TGG | - | tig0005557:48030-48049 | Msa1342410:intron | 40.0% | |
| AGAGTGGAAAGAAGAAGGAA+AGG | - | tig0005557:48054-48073 | Msa1342410:intron | 40.0% | |
| TCATCAATGAAAAGGACACC+AGG | + | tig0005557:48091-48110 | None:intergenic | 40.0% | |
| ! | TGGTGTCCTTTTCATTGATG+AGG | - | tig0005557:48090-48109 | Msa1342410:intron | 40.0% |
| ! | GTGCTTTTCATTCCTCAATC+GGG | - | tig0005557:48132-48151 | Msa1342410:CDS | 40.0% |
| !! | GTTGGTAGCCACAACTAAAA+TGG | + | tig0005557:48179-48198 | None:intergenic | 40.0% |
| AATAGTTGTGATGCCTCTGT+TGG | + | tig0005557:48197-48216 | None:intergenic | 40.0% | |
| AGGCGATCAAGTAGATCAAT+GGG | + | tig0005557:48253-48272 | None:intergenic | 40.0% | |
| TAGGCGATCAAGTAGATCAA+TGG | + | tig0005557:48254-48273 | None:intergenic | 40.0% | |
| GTTGAGTAGAGATGATGAGT+AGG | + | tig0005557:48273-48292 | None:intergenic | 40.0% | |
| CGAATTTCATCCTCAGTGTA+AGG | + | tig0005557:48295-48314 | None:intergenic | 40.0% | |
| TCTAATCACAGCATCTGCTT+TGG | - | tig0005557:48423-48442 | Msa1342410:CDS | 40.0% | |
| TTTGGCATGCCAAAAGAGAA+AGG | - | tig0005557:48441-48460 | Msa1342410:CDS | 40.0% | |
| TTGGCATGCCAAAAGAGAAA+GGG | - | tig0005557:48442-48461 | Msa1342410:CDS | 40.0% | |
| ! | CTGTCTTTCCCTTTCTCTTT+TGG | + | tig0005557:48453-48472 | None:intergenic | 40.0% |
| AAGATCGACACAGTACTTGA+TGG | - | tig0005557:48522-48541 | Msa1342410:CDS | 40.0% | |
| ATTTCACTGGACCATAGCAT+TGG | + | tig0005557:48602-48621 | None:intergenic | 40.0% | |
| CTGAGGTGAATGAATTTCAC+TGG | + | tig0005557:48615-48634 | None:intergenic | 40.0% | |
| AATTAAGTGCAATGACCCAC+CGG | + | tig0005557:48703-48722 | None:intergenic | 40.0% | |
| !!! | TTTTAGCTCCGTCATGGTTG+TGG | + | tig0005557:45206-45225 | None:intergenic | 45.0% |
| CGTTATCCTCCAGATGATCA+AGG | - | tig0005557:45369-45388 | Msa1342410:three_prime_UTR | 45.0% | |
| ATCCTCCAGATGATCAAGGA+CGG | - | tig0005557:45373-45392 | Msa1342410:three_prime_UTR | 45.0% | |
| TGGCAAAACCGCTATTGCAA+TGG | - | tig0005557:45441-45460 | Msa1342410:exon | 45.0% | |
| GGCAAAACCGCTATTGCAAT+GGG | - | tig0005557:45442-45461 | Msa1342410:exon | 45.0% | |
| AACCGCTATTGCAATGGGAA+TGG | - | tig0005557:45447-45466 | Msa1342410:CDS | 45.0% | |
| AAGCTCACTACCAGCAATCA+TGG | + | tig0005557:45503-45522 | None:intergenic | 45.0% | |
| ! | CAAGCTTTTCGGAAGGCTAT+AGG | - | tig0005557:45559-45578 | Msa1342410:CDS | 45.0% |
| GAGAATTAAGGAGGAAACGG+AGG | - | tig0005557:45585-45604 | Msa1342410:CDS | 45.0% | |
| GATTGAAGGTGAGGTTGTTG+AGG | - | tig0005557:45609-45628 | Msa1342410:CDS | 45.0% | |
| TGAGGTTCAGATTGATCGTC+CGG | - | tig0005557:45627-45646 | Msa1342410:CDS | 45.0% | |
| GAAGTTGACGTTGAAGTCGA+CGG | - | tig0005557:45678-45697 | Msa1342410:CDS | 45.0% | |
| ! | GGAGACGGTTTATGATTTGG+GGG | - | tig0005557:45705-45724 | Msa1342410:CDS | 45.0% |
| CGAAGATGATTGAGGCGATT+GGG | - | tig0005557:45728-45747 | Msa1342410:CDS | 45.0% | |
| TCAGGGAAGATTACGAAGCT+TGG | - | tig0005557:45796-45815 | Msa1342410:CDS | 45.0% | |
| CAGGGAAGATTACGAAGCTT+GGG | - | tig0005557:45797-45816 | Msa1342410:CDS | 45.0% | |
| ! | AGCTTGGGAGATCATTTTCG+CGG | - | tig0005557:45812-45831 | Msa1342410:CDS | 45.0% |
| !! | GTCGAGGGATTTTGATGCTA+TGG | - | tig0005557:45834-45853 | Msa1342410:CDS | 45.0% |
| !! | CGAGGGATTTTGATGCTATG+GGG | - | tig0005557:45836-45855 | Msa1342410:CDS | 45.0% |
| AAGTTTGTGCAGTGTCCTGA+TGG | - | tig0005557:45868-45887 | Msa1342410:CDS | 45.0% | |
| AAGCTATACCGGTGAGCTAA+TGG | - | tig0005557:46213-46232 | Msa1342410:intron | 45.0% | |
| TGATGCATCCATTGTGTGCA+TGG | - | tig0005557:46648-46667 | Msa1342410:intron | 45.0% | |
| ATATACCACCATGCTACCCA+AGG | + | tig0005557:46708-46727 | None:intergenic | 45.0% | |
| AGTTCTCCCAAACTGTCTCA+CGG | - | tig0005557:47207-47226 | Msa1342410:intron | 45.0% | |
| CGTTGCTTACAATCAGTGCA+TGG | - | tig0005557:47564-47583 | Msa1342410:intron | 45.0% | |
| TGCTTACAATCAGTGCATGG+TGG | - | tig0005557:47567-47586 | Msa1342410:intron | 45.0% | |
| GCTTACAATCAGTGCATGGT+GGG | - | tig0005557:47568-47587 | Msa1342410:intron | 45.0% | |
| CTTACAATCAGTGCATGGTG+GGG | - | tig0005557:47569-47588 | Msa1342410:intron | 45.0% | |
| CATCATGCTGCTCAAGACTT+AGG | + | tig0005557:47630-47649 | None:intergenic | 45.0% | |
| !! | TGACCCTTTTTCGTCGAGAT+TGG | - | tig0005557:47685-47704 | Msa1342410:intron | 45.0% |
| !! | GACCCTTTTTCGTCGAGATT+GGG | - | tig0005557:47686-47705 | Msa1342410:intron | 45.0% |
| TTTCAGAACGCAGGGATTTC+TGG | - | tig0005557:47964-47983 | Msa1342410:intron | 45.0% | |
| !!! | GGATTTCTGGCTCTTTTCAC+CGG | - | tig0005557:47977-47996 | Msa1342410:intron | 45.0% |
| GTGAAATTCGTGCAGAAGTC+AGG | - | tig0005557:48008-48027 | Msa1342410:intron | 45.0% | |
| TTAGTTGTGGCTACCAACAG+AGG | - | tig0005557:48181-48200 | Msa1342410:CDS | 45.0% | |
| !! | AGAGGCATCACAACTATTCG+AGG | - | tig0005557:48199-48218 | Msa1342410:CDS | 45.0% |
| ATCAATGGGAATCCCATGTG+GGG | + | tig0005557:48239-48258 | None:intergenic | 45.0% | |
| GATCAATGGGAATCCCATGT+GGG | + | tig0005557:48240-48259 | None:intergenic | 45.0% | |
| AGATCAATGGGAATCCCATG+TGG | + | tig0005557:48241-48260 | None:intergenic | 45.0% | |
| CTCTACTCAACCTTACACTG+AGG | - | tig0005557:48282-48301 | Msa1342410:CDS | 45.0% | |
| TCTGGATATCAGATGCCAAG+AGG | - | tig0005557:48321-48340 | Msa1342410:CDS | 45.0% | |
| TCATGTCTACGTCTTCCTCT+TGG | + | tig0005557:48339-48358 | None:intergenic | 45.0% | |
| GAAGACGTAGACATGAGTGA+AGG | - | tig0005557:48343-48362 | Msa1342410:CDS | 45.0% | |
| TGAAGACGACACCAATGCTA+TGG | - | tig0005557:48588-48607 | Msa1342410:CDS | 45.0% | |
| ATCTACAGCATTCACGTGAG+AGG | - | tig0005557:48773-48792 | Msa1342410:CDS | 45.0% | |
| GATCATCTGGAGGATAACGC+CGG | + | tig0005557:45368-45387 | None:intergenic | 50.0% | |
| TACCGTCCTTGATCATCTGG+AGG | + | tig0005557:45378-45397 | None:intergenic | 50.0% | |
| ! | ATAGCGGTTTTGCCAGTACC+TGG | + | tig0005557:45436-45455 | None:intergenic | 50.0% |
| CGCCATTCCCATTGCAATAG+CGG | + | tig0005557:45452-45471 | None:intergenic | 50.0% | |
| ATGGGAATGGCGAAATCCCT+CGG | - | tig0005557:45460-45479 | Msa1342410:CDS | 50.0% | |
| GAAAGGAGTCTCAAGACCGA+GGG | + | tig0005557:45479-45498 | None:intergenic | 50.0% | |
| ACTCCTTTCGCCATGATTGC+TGG | - | tig0005557:45490-45509 | Msa1342410:CDS | 50.0% | |
| CTACCAGCAATCATGGCGAA+AGG | + | tig0005557:45496-45515 | None:intergenic | 50.0% | |
| !! | TGGTAGTGAGCTTTTCTCGC+TGG | - | tig0005557:45510-45529 | Msa1342410:CDS | 50.0% |
| GAGGAAACGGAGGTGATTGA+AGG | - | tig0005557:45595-45614 | Msa1342410:CDS | 50.0% | |
| AACGGAGGTGATTGAAGGTG+AGG | - | tig0005557:45600-45619 | Msa1342410:CDS | 50.0% | |
| TTTGGGGGCGAAGATGATTG+AGG | - | tig0005557:45720-45739 | Msa1342410:CDS | 50.0% | |
| GCGAAGATGATTGAGGCGAT+TGG | - | tig0005557:45727-45746 | Msa1342410:CDS | 50.0% | |
| GATGATTGAGGCGATTGGGA+AGG | - | tig0005557:45732-45751 | Msa1342410:CDS | 50.0% | |
| GGAAGGAGAAGGTGACAAGT+GGG | - | tig0005557:45749-45768 | Msa1342410:CDS | 50.0% | |
| GAAGGAGAAGGTGACAAGTG+GGG | - | tig0005557:45750-45769 | Msa1342410:CDS | 50.0% | |
| ! | GAGATCATTTTCGCGGTCGA+GGG | - | tig0005557:45819-45838 | Msa1342410:CDS | 50.0% |
| ! | TTTTGATGCTATGGGGCCTC+AGG | - | tig0005557:45843-45862 | Msa1342410:CDS | 50.0% |
| CACTGCACAAACTTCACCTG+AGG | + | tig0005557:45862-45881 | None:intergenic | 50.0% | |
| CTCTTCTGCAACTCACCATC+AGG | + | tig0005557:45886-45905 | None:intergenic | 50.0% | |
| ! | CTGATGGTGAGTTGCAGAAG+AGG | - | tig0005557:45884-45903 | Msa1342410:CDS | 50.0% |
| TGGTGAGTTGCAGAAGAGGA+AGG | - | tig0005557:45888-45907 | Msa1342410:CDS | 50.0% | |
| TGAGTTGCAGAAGAGGAAGG+AGG | - | tig0005557:45891-45910 | Msa1342410:CDS | 50.0% | |
| CATCCATTGTGTGCATGGTG+AGG | - | tig0005557:46653-46672 | Msa1342410:intron | 50.0% | |
| CTACCTCACCATGCACACAA+TGG | + | tig0005557:46659-46678 | None:intergenic | 50.0% | |
| TGACCCATTGTTGCCGAGAT+CGG | - | tig0005557:46758-46777 | Msa1342410:intron | 50.0% | |
| GTTCTCCCAAACTGTCTCAC+GGG | - | tig0005557:47208-47227 | Msa1342410:intron | 50.0% | |
| AAGCACCCGTGAGACAGTTT+GGG | + | tig0005557:47216-47235 | None:intergenic | 50.0% | |
| TAAGCACCCGTGAGACAGTT+TGG | + | tig0005557:47217-47236 | None:intergenic | 50.0% | |
| CTCAAGACTTAGGGCTGACT+TGG | + | tig0005557:47620-47639 | None:intergenic | 50.0% | |
| ACGAATTTCACCCGTGTCAC+CGG | + | tig0005557:47999-48018 | None:intergenic | 50.0% | |
| TTGACACGAAAGTGGCAGAG+TGG | - | tig0005557:48038-48057 | Msa1342410:intron | 50.0% | |
| GTGGCAGAGTGGAAAGAAGA+AGG | - | tig0005557:48049-48068 | Msa1342410:intron | 50.0% | |
| TTCATTCCTCAATCGGGCTC+TGG | - | tig0005557:48138-48157 | Msa1342410:CDS | 50.0% | |
| GTGTGCGCGCTATCTACTAC+AGG | + | tig0005557:45117-45136 | None:intergenic | 55.0% | |
| TAGCTCCGTCATGGTTGTGG+CGG | + | tig0005557:45203-45222 | None:intergenic | 55.0% | |
| CTAAGGAAGAGTCGAGACCG+AGG | + | tig0005557:45291-45310 | None:intergenic | 55.0% | |
| TTTGCCAGTACCTGGCTGAC+CGG | + | tig0005557:45428-45447 | None:intergenic | 55.0% | |
| CGAAAGGAGTCTCAAGACCG+AGG | + | tig0005557:45480-45499 | None:intergenic | 55.0% | |
| GGTTCAGATTGATCGTCCGG+CGG | - | tig0005557:45630-45649 | Msa1342410:CDS | 55.0% | |
| GACGTTGAAGTCGACGGAGA+TGG | - | tig0005557:45684-45703 | Msa1342410:CDS | 55.0% | |
| GAAGTCGACGGAGATGGAGA+CGG | - | tig0005557:45690-45709 | Msa1342410:CDS | 55.0% | |
| TGAGGCGATTGGGAAGGAGA+AGG | - | tig0005557:45738-45757 | Msa1342410:CDS | 55.0% | |
| GGGAAGGAGAAGGTGACAAG+TGG | - | tig0005557:45748-45767 | Msa1342410:CDS | 55.0% | |
| ! | GGAGATCATTTTCGCGGTCG+AGG | - | tig0005557:45818-45837 | Msa1342410:CDS | 55.0% |
| GTTGCAGAAGAGGAAGGAGG+TGG | - | tig0005557:45894-45913 | Msa1342410:CDS | 55.0% | |
| AGACTTGCCAATGGTGGCCT+TGG | - | tig0005557:46688-46707 | Msa1342410:intron | 55.0% | |
| GACTTGCCAATGGTGGCCTT+GGG | - | tig0005557:46689-46708 | Msa1342410:intron | 55.0% | |
| ATGCTACCCAAGGCCACCAT+TGG | + | tig0005557:46698-46717 | None:intergenic | 55.0% | |
| ! | AATGGTGGCCTTGGGTAGCA+TGG | - | tig0005557:46697-46716 | Msa1342410:intron | 55.0% |
| TCGGCAACAATGGGTCAGCA+AGG | + | tig0005557:46755-46774 | None:intergenic | 55.0% | |
| GACCCATTGTTGCCGAGATC+GGG | - | tig0005557:46759-46778 | Msa1342410:intron | 55.0% | |
| CTCCCGATCTCGGCAACAAT+GGG | + | tig0005557:46764-46783 | None:intergenic | 55.0% | |
| TCTCCCGATCTCGGCAACAA+TGG | + | tig0005557:46765-46784 | None:intergenic | 55.0% | |
| GCACTTGCTTCTCCCGATCT+CGG | + | tig0005557:46774-46793 | None:intergenic | 55.0% | |
| AAGTGGCCACATCATGCTGC+TGG | - | tig0005557:47329-47348 | Msa1342410:intron | 55.0% | |
| AGTGGCCACATCATGCTGCT+GGG | - | tig0005557:47330-47349 | Msa1342410:intron | 55.0% | |
| TGTGTCCCAGCAGCATGATG+TGG | + | tig0005557:47338-47357 | None:intergenic | 55.0% | |
| TCGACGAAAAAGGGTCAGCG+AGG | + | tig0005557:47682-47701 | None:intergenic | 55.0% | |
| ! | GGCTCTTTTCACCGGTGACA+CGG | - | tig0005557:47985-48004 | Msa1342410:intron | 55.0% |
| ! | GCTCTTTTCACCGGTGACAC+GGG | - | tig0005557:47986-48005 | Msa1342410:intron | 55.0% |
| GGAAAGGCAGAGATTGTGCC+TGG | - | tig0005557:48070-48089 | Msa1342410:intron | 55.0% | |
| CATTCTCCAGAGCCCGATTG+AGG | + | tig0005557:48147-48166 | None:intergenic | 55.0% | |
| GGCGATGGAGATGGAGAGAG+TGG | + | tig0005557:45182-45201 | None:intergenic | 60.0% | |
| CATCGCCGCCACAACCATGA+CGG | - | tig0005557:45195-45214 | Msa1342410:three_prime_UTR | 60.0% | |
| CTCTATGCGCGTTAGGTCGC+GGG | + | tig0005557:45239-45258 | None:intergenic | 60.0% | |
| GCTCTATGCGCGTTAGGTCG+CGG | + | tig0005557:45240-45259 | None:intergenic | 60.0% | |
| CTAACGCGCATAGAGCGCGT+GGG | - | tig0005557:45244-45263 | Msa1342410:three_prime_UTR | 60.0% | |
| GGAGCACACTCACACATCCG+CGG | - | tig0005557:45265-45284 | Msa1342410:three_prime_UTR | 60.0% | |
| GACTTGGCCGACCATGCCTT+CGG | + | tig0005557:45329-45348 | None:intergenic | 60.0% | |
| CGGCTTTACGAGCGGAGACT+TGG | + | tig0005557:45345-45364 | None:intergenic | 60.0% | |
| CATCTGGAGGATAACGCCGG+CGG | + | tig0005557:45365-45384 | None:intergenic | 60.0% | |
| TCAGATTGATCGTCCGGCGG+TGG | - | tig0005557:45633-45652 | Msa1342410:CDS | 60.0% | |
| GGTTGTGGCGGCGATGGAGA+TGG | + | tig0005557:45191-45210 | None:intergenic | 65.0% | |
| CGTCATGGTTGTGGCGGCGA+TGG | + | tig0005557:45197-45216 | None:intergenic | 65.0% | |
| CCACGCGCTCTATGCGCGTT+AGG | + | tig0005557:45246-45265 | None:intergenic | 65.0% | |
| CCTAACGCGCATAGAGCGCG+TGG | - | tig0005557:45243-45262 | Msa1342410:three_prime_UTR | 65.0% | |
| CACTCACACATCCGCGGCCT+CGG | - | tig0005557:45271-45290 | Msa1342410:three_prime_UTR | 65.0% | |
| AAGAGTCGAGACCGAGGCCG+CGG | + | tig0005557:45285-45304 | None:intergenic | 65.0% | |
| ! | GCCGTCTCCGAAGGCATGGT+CGG | - | tig0005557:45319-45338 | Msa1342410:three_prime_UTR | 65.0% |
| GCCGACCATGCCTTCGGAGA+CGG | + | tig0005557:45323-45342 | None:intergenic | 65.0% | |
| GTCTCCGCTCGTAAAGCCGC+CGG | - | tig0005557:45346-45365 | Msa1342410:three_prime_UTR | 65.0% | |
| AACGCCGGCGGCTTTACGAG+CGG | + | tig0005557:45353-45372 | None:intergenic | 65.0% | |
| ATTGATCGTCCGGCGGTGGC+TGG | - | tig0005557:45637-45656 | Msa1342410:CDS | 65.0% | |
| ! | GGTGGCCTTGGGTAGCATGG+TGG | - | tig0005557:46700-46719 | Msa1342410:intron | 65.0% |
| ! | GGAGACGGCGCGTGGCTCTA+AGG | + | tig0005557:45308-45327 | None:intergenic | 70.0% |
| ATGCCTTCGGAGACGGCGCG+TGG | + | tig0005557:45316-45335 | None:intergenic | 70.0% | |
| ACGCGCCGTCTCCGAAGGCA+TGG | - | tig0005557:45315-45334 | Msa1342410:three_prime_UTR | 70.0% | |
| GGCGAGGAGAACAGCGCGTC+CGG | + | tig0005557:45407-45426 | None:intergenic | 70.0% | |
| GGACGCGCTGTTCTCCTCGC+CGG | - | tig0005557:45406-45425 | Msa1342410:three_prime_UTR | 70.0% | |
| GTTCTCCTCGCCGGTCAGCC+AGG | - | tig0005557:45415-45434 | Msa1342410:three_prime_UTR | 70.0% | |
| CAGTACCTGGCTGACCGGCG+AGG | + | tig0005557:45423-45442 | None:intergenic | 70.0% | |
| CTCGCCGGTCAGCCAGGTAC+TGG | - | tig0005557:45421-45440 | Msa1342410:three_prime_UTR | 70.0% | |
| GGCTGGAGCTGCGGCGAAGA+CGG | - | tig0005557:45654-45673 | Msa1342410:CDS | 70.0% | |
| GCTGGAGCTGCGGCGAAGAC+GGG | - | tig0005557:45655-45674 | Msa1342410:CDS | 70.0% | |
| CTGGAGCTGCGGCGAAGACG+GGG | - | tig0005557:45656-45675 | Msa1342410:CDS | 70.0% | |
| GAGCCACGCGCCGTCTCCGA+AGG | - | tig0005557:45310-45329 | Msa1342410:three_prime_UTR | 75.0% | |
| TCCGGCGGTGGCTGGAGCTG+CGG | - | tig0005557:45645-45664 | Msa1342410:CDS | 75.0% | |
| ! | GCCGCAGCTCCAGCCACCGC+CGG | + | tig0005557:45649-45668 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0005557 | gene | 45097 | 48965 | 45097 | ID=Msa1342410;Name=Msa1342410 |
| tig0005557 | mRNA | 45097 | 48965 | 45097 | ID=Msa1342410-mRNA-1;Parent=Msa1342410;Name=Msa1342410-mRNA-1;_AED=0.00;_eAED=0.00;_QI=114|1|1|1|1|1|2|347|465 |
| tig0005557 | exon | 45097 | 46092 | 45097 | ID=Msa1342410-mRNA-1:exon:3595;Parent=Msa1342410-mRNA-1 |
| tig0005557 | exon | 48103 | 48965 | 48103 | ID=Msa1342410-mRNA-1:exon:3594;Parent=Msa1342410-mRNA-1 |
| tig0005557 | five_prime_UTR | 48852 | 48965 | 48852 | ID=Msa1342410-mRNA-1:five_prime_utr;Parent=Msa1342410-mRNA-1 |
| tig0005557 | CDS | 48103 | 48851 | 48103 | ID=Msa1342410-mRNA-1:cds;Parent=Msa1342410-mRNA-1 |
| tig0005557 | CDS | 45444 | 46092 | 45444 | ID=Msa1342410-mRNA-1:cds;Parent=Msa1342410-mRNA-1 |
| tig0005557 | three_prime_UTR | 45097 | 45443 | 45097 | ID=Msa1342410-mRNA-1:three_prime_utr;Parent=Msa1342410-mRNA-1 |
| Gene Sequence |
| Protein sequence |
