Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1186290 | sp|P51074|ANX4_FRAAN | 61.489 | 309 | 83 | 3 | 1 | 273 | 1 | 309 | 1.92e-129 | 374 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1186290 | G7LF87 | 87.013 | 308 | 5 | 2 | 1 | 273 | 1 | 308 | 0.0 | 525 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0657710 | Msa1186290 | 0.808235 | 3.421587e-50 | -8.615850e-47 |
| Msa0828960 | Msa1186290 | 0.802468 | 5.531251e-49 | -8.615850e-47 |
| Msa0940910 | Msa1186290 | 0.826239 | 3.024988e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1186290 | MtrunA17_Chr8g0352621 | 87.013 | 308 | 5 | 2 | 1 | 273 | 1 | 308 | 0.0 | 525 |
| Msa1186290 | MtrunA17_Chr3g0083901 | 68.932 | 309 | 60 | 3 | 1 | 273 | 1 | 309 | 1.04e-152 | 430 |
| Msa1186290 | MtrunA17_Chr8g0352591 | 71.477 | 298 | 60 | 3 | 1 | 273 | 1 | 298 | 3.37e-149 | 421 |
| Msa1186290 | MtrunA17_Chr8g0352611 | 65.696 | 309 | 69 | 4 | 1 | 273 | 1 | 308 | 4.96e-136 | 387 |
| Msa1186290 | MtrunA17_Chr3g0083921 | 61.812 | 309 | 82 | 3 | 1 | 273 | 1 | 309 | 1.83e-132 | 379 |
| Msa1186290 | MtrunA17_Chr2g0293441 | 41.987 | 312 | 145 | 3 | 1 | 276 | 1 | 312 | 1.21e-80 | 246 |
| Msa1186290 | MtrunA17_Chr8g0382281 | 44.839 | 310 | 134 | 3 | 1 | 273 | 1 | 310 | 1.51e-74 | 231 |
| Msa1186290 | MtrunA17_Chr5g0425971 | 41.290 | 310 | 145 | 3 | 1 | 273 | 1 | 310 | 2.74e-72 | 225 |
| Msa1186290 | MtrunA17_Chr8g0352571 | 36.039 | 308 | 159 | 3 | 4 | 273 | 6 | 313 | 5.89e-58 | 189 |
| Msa1186290 | MtrunA17_Chr8g0393281 | 35.370 | 311 | 162 | 5 | 1 | 273 | 1 | 310 | 4.57e-54 | 178 |
| Msa1186290 | MtrunA17_Chr6g0479411 | 35.256 | 312 | 161 | 6 | 1 | 273 | 28 | 337 | 1.45e-49 | 167 |
| Msa1186290 | MtrunA17_Chr6g0479421 | 36.218 | 312 | 158 | 6 | 1 | 273 | 1 | 310 | 1.41e-48 | 164 |
| Msa1186290 | MtrunA17_Chr1g0162071 | 33.441 | 311 | 168 | 5 | 1 | 273 | 1 | 310 | 2.86e-46 | 158 |
| Msa1186290 | MtrunA17_Chr1g0210981 | 33.654 | 312 | 166 | 6 | 1 | 273 | 1 | 310 | 3.84e-44 | 153 |
| Msa1186290 | MtrunA17_Chr6g0479391 | 32.550 | 298 | 162 | 5 | 13 | 273 | 15 | 310 | 6.78e-41 | 144 |
| Msa1186290 | MtrunA17_Chr8g0352581 | 33.333 | 312 | 150 | 7 | 13 | 273 | 5 | 309 | 3.01e-38 | 137 |
| Msa1186290 | MtrunA17_Chr3g0084021 | 72.059 | 68 | 19 | 0 | 105 | 172 | 2 | 69 | 1.15e-27 | 102 |
| Msa1186290 | MtrunA17_Chr6g0461141 | 27.972 | 286 | 157 | 7 | 31 | 273 | 28 | 307 | 2.13e-25 | 103 |
| Msa1186290 | MtrunA17_Chr3g0084011 | 62.857 | 70 | 25 | 1 | 1 | 69 | 1 | 70 | 5.67e-24 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1186290 | AT5G12380.1 | 48.220 | 309 | 124 | 3 | 1 | 273 | 1 | 309 | 1.47e-98 | 293 |
| Msa1186290 | AT1G35720.1 | 44.373 | 311 | 135 | 4 | 1 | 273 | 1 | 311 | 2.67e-79 | 244 |
| Msa1186290 | AT5G10230.1 | 44.839 | 310 | 134 | 3 | 1 | 273 | 1 | 310 | 4.80e-79 | 243 |
| Msa1186290 | AT5G10220.1 | 47.000 | 300 | 122 | 4 | 11 | 273 | 13 | 312 | 4.18e-78 | 241 |
| Msa1186290 | AT5G65020.1 | 42.765 | 311 | 140 | 4 | 1 | 273 | 1 | 311 | 1.11e-73 | 229 |
| Msa1186290 | AT5G65020.2 | 42.657 | 286 | 128 | 3 | 24 | 273 | 11 | 296 | 1.59e-67 | 213 |
| Msa1186290 | AT2G38760.1 | 37.049 | 305 | 151 | 4 | 10 | 273 | 12 | 316 | 1.42e-60 | 196 |
| Msa1186290 | AT1G68090.1 | 32.692 | 312 | 170 | 5 | 1 | 273 | 1 | 311 | 3.81e-42 | 148 |
| Msa1186290 | AT2G38750.1 | 30.132 | 302 | 153 | 8 | 24 | 273 | 19 | 314 | 6.98e-28 | 110 |
| Msa1186290 | AT2G38750.2 | 30.132 | 302 | 153 | 8 | 24 | 273 | 2 | 297 | 7.06e-28 | 110 |
| Msa1186290 | AT1G68090.2 | 30.279 | 251 | 135 | 5 | 1 | 212 | 1 | 250 | 1.99e-26 | 105 |
Find 60 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAGTGTTATCACAATTT+TGG | 0.141323 | 8_1:-24396758 | Msa1186290:CDS |
| TGCTGATCGCGATGCTGTTT+TGG | 0.258712 | 8_1:-24396479 | Msa1186290:CDS |
| GATGTCCTTCAGATCTTTCT+CGG | 0.304640 | 8_1:+24395596 | None:intergenic |
| TATTACCTTTAAAAGCCTTT+TGG | 0.323843 | 8_1:+24398250 | None:intergenic |
| CTCATTGCCAACACTTCTTC+AGG | 0.333994 | 8_1:+24396388 | None:intergenic |
| TTGGCAGCTGTTGGTTGGAT+TGG | 0.342544 | 8_1:-24396188 | Msa1186290:intron |
| GGATTCTAATGGCTTCTTCA+TGG | 0.356639 | 8_1:+24396068 | None:intergenic |
| ACAAATCAGAAAATCTTATC+AGG | 0.360843 | 8_1:-24396710 | Msa1186290:CDS |
| TACTGAGATCAATCCGAAAT+TGG | 0.367012 | 8_1:-24396143 | Msa1186290:CDS |
| GCAGTGGCAAAGGAAATTTC+AGG | 0.403300 | 8_1:-24395531 | Msa1186290:CDS |
| GGCTCTTGGCAGCTGTTGGT+TGG | 0.410430 | 8_1:-24396193 | Msa1186290:intron |
| CACCAGAGAGTTCAGATTCA+AGG | 0.434862 | 8_1:+24396659 | None:intergenic |
| GAGTCTTGCTCCTTGTAGTA+AGG | 0.451508 | 8_1:+24396047 | None:intergenic |
| CCTTGTAGTAAGGATTCTAA+TGG | 0.455797 | 8_1:+24396057 | None:intergenic |
| CCACCTGGTATCGGTATTGT+TGG | 0.459295 | 8_1:-24393789 | Msa1186290:CDS |
| CGCGGTGCGCTGAAAAGGGT+TGG | 0.481256 | 8_1:-24395660 | Msa1186290:CDS |
| CGCCTTGAATCTGAACTCTC+TGG | 0.485385 | 8_1:-24396661 | Msa1186290:intron |
| AAAACAGCATCGCGATCAGC+AGG | 0.506722 | 8_1:+24396481 | None:intergenic |
| GTTCAGATTCAAGGCGTTTG+AGG | 0.508007 | 8_1:+24396668 | None:intergenic |
| CTTGCTTCCCCAACAAGGTA+AGG | 0.508755 | 8_1:+24395490 | None:intergenic |
| AGCTGTGTACCGTTGGATGC+TGG | 0.510810 | 8_1:-24396506 | Msa1186290:CDS |
| GGCGTTTGAGGATATCCTCT+TGG | 0.516904 | 8_1:+24396680 | None:intergenic |
| CCATGGCATTTCCATAACTA+AGG | 0.517141 | 8_1:-24395990 | Msa1186290:intron |
| CCTGGTATCGGTATTGTTGG+CGG | 0.520706 | 8_1:-24393786 | Msa1186290:CDS |
| CCTTGAGGATGCAGTGGCAA+AGG | 0.527077 | 8_1:-24395541 | Msa1186290:CDS |
| CCATAAGAAGTACTATGAAA+AGG | 0.532592 | 8_1:-24395808 | Msa1186290:intron |
| CTGGTATCGGTATTGTTGGC+GGG | 0.533153 | 8_1:-24393785 | Msa1186290:CDS |
| TCCTTGATTACAGAAACTGC+TGG | 0.533820 | 8_1:-24395889 | Msa1186290:intron |
| AGTGATAAGCCACCTGGTAT+CGG | 0.537837 | 8_1:-24393798 | Msa1186290:CDS |
| AGACGCTGAGGCTCTCCAAA+AGG | 0.539038 | 8_1:-24398265 | Msa1186290:CDS |
| CCTTTGCCACTGCATCCTCA+AGG | 0.543737 | 8_1:+24395541 | None:intergenic |
| ATCAGAGAGCTGTGTACCGT+TGG | 0.546500 | 8_1:-24396513 | Msa1186290:intron |
| CCATTAGAATCCTTACTACA+AGG | 0.546524 | 8_1:-24396057 | Msa1186290:CDS |
| TCACTAGCAATACTAACATC+AGG | 0.548277 | 8_1:+24393816 | None:intergenic |
| TTGGTGAGCTCATTTAGATA+TGG | 0.553459 | 8_1:-24396169 | Msa1186290:CDS |
| AGGGTTGGAACTGATGAAGA+TGG | 0.558767 | 8_1:-24395645 | Msa1186290:CDS |
| GCGAATATAGCCATCAAGGA+TGG | 0.562585 | 8_1:-24396457 | Msa1186290:CDS |
| TTTGGCGAATATAGCCATCA+AGG | 0.562986 | 8_1:-24396461 | Msa1186290:CDS |
| AGAGCCTCAGCGTCTTCCAC+AGG | 0.570840 | 8_1:+24398273 | None:intergenic |
| GTGAGCTCATTTAGATATGG+TGG | 0.571845 | 8_1:-24396166 | Msa1186290:CDS |
| TATTCTTCATGAATCAATCA+AGG | 0.578573 | 8_1:-24396104 | Msa1186290:CDS |
| GTCATTGATGCATCGAATCG+CGG | 0.579244 | 8_1:+24395830 | None:intergenic |
| AAGGAGCAAGACTCAGCTGT+TGG | 0.579770 | 8_1:-24396038 | Msa1186290:CDS |
| TGCCATGGTCATCTCTGTAA+CGG | 0.597289 | 8_1:+24396005 | None:intergenic |
| CCGCCAACAATACCGATACC+AGG | 0.606171 | 8_1:+24393786 | None:intergenic |
| AAGAGCCGAGAAAGATCTGA+AGG | 0.608342 | 8_1:-24395601 | Msa1186290:CDS |
| CCTTAGTTATGGAAATGCCA+TGG | 0.610466 | 8_1:+24395990 | None:intergenic |
| GAGAAACAGTGTTCACCTTG+AGG | 0.617004 | 8_1:-24395556 | Msa1186290:CDS |
| TACAGTAAAATCATCTCCTG+TGG | 0.624236 | 8_1:-24398289 | Msa1186290:CDS |
| TGTTCACCTTGAGGATGCAG+TGG | 0.633928 | 8_1:-24395547 | Msa1186290:CDS |
| CAGCAGGTTCCAGCATCCAA+CGG | 0.637752 | 8_1:+24396497 | None:intergenic |
| ATCTCCTGTGGAAGACGCTG+AGG | 0.640239 | 8_1:-24398277 | Msa1186290:CDS |
| ATTGCTAGTGATAAGCCACC+TGG | 0.646931 | 8_1:-24393804 | Msa1186290:CDS |
| TTATCAGGAAATTTACCAAG+AGG | 0.646965 | 8_1:-24396695 | Msa1186290:CDS |
| CTAGCAATACTAACATCAGG+TGG | 0.657535 | 8_1:+24393819 | None:intergenic |
| TGCATCTGATGACTTTCACA+AGG | 0.672519 | 8_1:-24395862 | Msa1186290:CDS |
| TGAAGATGGACTGACTCGTG+TGG | 0.685108 | 8_1:-24395631 | Msa1186290:CDS |
| CATGATGTTTAGATTCTGCG+CGG | 0.707946 | 8_1:-24395678 | Msa1186290:intron |
| AACCGTTACAGAGATGACCA+TGG | 0.726336 | 8_1:-24396007 | Msa1186290:CDS |
| CCAACAATACCGATACCAGG+TGG | 0.768379 | 8_1:+24393789 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAAAGAAAAAAGATTAA+AGG | + | chr8_1:24394207-24394226 | None:intergenic | 10.0% |
| !! | AAGAAAAATTATAAAAGTTT+GGG | + | chr8_1:24394310-24394329 | None:intergenic | 10.0% |
| !! | AAAGAAAAATTATAAAAGTT+TGG | + | chr8_1:24394311-24394330 | None:intergenic | 10.0% |
| !! | ATTAAGAGAATTATTATTTA+TGG | - | chr8_1:24396872-24396891 | Msa1186290:intron | 10.0% |
| !!! | ATTTTGATAATGTATATAAA+AGG | - | chr8_1:24398220-24398239 | Msa1186290:intron | 10.0% |
| !!! | TCATCTTCAATTAATTATTT+TGG | - | chr8_1:24393874-24393893 | Msa1186290:intron | 15.0% |
| !!! | ATTTTTGTAATTCTTTACTA+GGG | - | chr8_1:24393984-24394003 | Msa1186290:intron | 15.0% |
| !! | AATGTTATATTTAACAGTAT+TGG | - | chr8_1:24394275-24394294 | Msa1186290:intron | 15.0% |
| !! | AGAAAAATTATAAAAGTTTG+GGG | + | chr8_1:24394309-24394328 | None:intergenic | 15.0% |
| !!! | TAACTATATATAGAAGATTT+TGG | - | chr8_1:24394716-24394735 | Msa1186290:intron | 15.0% |
| !! | TAGGAAAATATAATCAATTA+TGG | - | chr8_1:24395026-24395045 | Msa1186290:intron | 15.0% |
| !! | GTCAAAAAAAAAATAATACA+TGG | - | chr8_1:24395185-24395204 | Msa1186290:intron | 15.0% |
| !! | TAATAGGTTACATAAAAAAA+AGG | + | chr8_1:24395512-24395531 | None:intergenic | 15.0% |
| !! | AAAGTGAAAACAAAATTAAA+TGG | + | chr8_1:24396153-24396172 | None:intergenic | 15.0% |
| !! | TCATGGTAAAAAAAAAATAA+AGG | + | chr8_1:24396399-24396418 | None:intergenic | 15.0% |
| !!! | GTGAAAATTAGATAATATTT+TGG | - | chr8_1:24396825-24396844 | Msa1186290:intron | 15.0% |
| !! | TAATAATTCTCTTAATATGT+TGG | + | chr8_1:24396868-24396887 | None:intergenic | 15.0% |
| !! | TTGTGAAAAAAAAATTGATA+GGG | + | chr8_1:24397099-24397118 | None:intergenic | 15.0% |
| !! | ATTGTGAAAAAAAAATTGAT+AGG | + | chr8_1:24397100-24397119 | None:intergenic | 15.0% |
| !! | ACAATATCATTGATAAAAAT+TGG | + | chr8_1:24397128-24397147 | None:intergenic | 15.0% |
| !! | AACAGAAAATTACTAAAATT+AGG | + | chr8_1:24397483-24397502 | None:intergenic | 15.0% |
| !!! | TTGTTTCAGTTTATTATTTT+TGG | - | chr8_1:24397504-24397523 | Msa1186290:intron | 15.0% |
| !!! | TAAGTGATTAGTTTTTTCTA+TGG | - | chr8_1:24393770-24393789 | Msa1186290:CDS | 20.0% |
| !!! | CATTTTTGTAATTCTTTACT+AGG | - | chr8_1:24393983-24394002 | Msa1186290:intron | 20.0% |
| !!! | TTTTTGTAATTCTTTACTAG+GGG | - | chr8_1:24393985-24394004 | Msa1186290:intron | 20.0% |
| !!! | TATTTATTTTTCCCTTTTGT+TGG | + | chr8_1:24394548-24394567 | None:intergenic | 20.0% |
| !! | ATAACATTTACTATATCAGT+AGG | + | chr8_1:24394602-24394621 | None:intergenic | 20.0% |
| !!! | TATATAGTTAGTGTCTATTT+TGG | + | chr8_1:24394706-24394725 | None:intergenic | 20.0% |
| !!! | GTGTTTAACTTTTTTAACAA+TGG | + | chr8_1:24394914-24394933 | None:intergenic | 20.0% |
| !! | ACATAAAAATATTGATGTTG+CGG | - | chr8_1:24395227-24395246 | Msa1186290:intron | 20.0% |
| !!! | AAAAAGGTATATGAAATTGT+TGG | + | chr8_1:24395496-24395515 | None:intergenic | 20.0% |
| !! | AGGCATATATATTGTAATAA+TGG | - | chr8_1:24396647-24396666 | Msa1186290:intron | 20.0% |
| !! | GGCATATATATTGTAATAAT+GGG | - | chr8_1:24396648-24396667 | Msa1186290:intron | 20.0% |
| !!! | TATATTGTAATAATGGGATT+TGG | - | chr8_1:24396654-24396673 | Msa1186290:intron | 20.0% |
| !! | TAAATTACTAGTTGAATGAA+TGG | - | chr8_1:24396782-24396801 | Msa1186290:intron | 20.0% |
| !! | AATTATTATTTATGGCTTCA+AGG | - | chr8_1:24396880-24396899 | Msa1186290:intron | 20.0% |
| !! | ATATCTTGAAAATTGATCAA+TGG | - | chr8_1:24396932-24396951 | Msa1186290:intron | 20.0% |
| !!! | TGGTGATTTAAGTTATTATA+TGG | + | chr8_1:24396966-24396985 | None:intergenic | 20.0% |
| !! | AAGTACTATAGAAAATACTA+TGG | + | chr8_1:24397451-24397470 | None:intergenic | 20.0% |
| !!! | TTTATTATTTTTGGCCTATT+AGG | - | chr8_1:24397513-24397532 | Msa1186290:intron | 20.0% |
| !!! | TTATTATTTTTGGCCTATTA+GGG | - | chr8_1:24397514-24397533 | Msa1186290:intron | 20.0% |
| !! | TAGAAACAATCAAATTATTG+AGG | - | chr8_1:24397940-24397959 | Msa1186290:intron | 20.0% |
| !! | TAGATATTACAAAAAACTGA+AGG | - | chr8_1:24398048-24398067 | Msa1186290:intron | 20.0% |
| !!! | TAATCTTTGTTGTAACAAAA+CGG | + | chr8_1:24398118-24398137 | None:intergenic | 20.0% |
| !!! | TATTACCTTTAAAAGCCTTT+TGG | + | chr8_1:24393845-24393864 | None:intergenic | 25.0% |
| !! | ACCTTTTAATGTTCTCAAAT+GGG | - | chr8_1:24394163-24394182 | Msa1186290:intron | 25.0% |
| ! | ACTAGAATTCACATGTATAA+AGG | + | chr8_1:24394233-24394252 | None:intergenic | 25.0% |
| !!! | CAACACTTTAAGTGTTTTTT+AGG | + | chr8_1:24394352-24394371 | None:intergenic | 25.0% |
| ! | TAACTCATTCAATATTGTGA+AGG | - | chr8_1:24394493-24394512 | Msa1186290:intron | 25.0% |
| ! | AACTCATTCAATATTGTGAA+GGG | - | chr8_1:24394494-24394513 | Msa1186290:intron | 25.0% |
| ! | TCATTTCAAATACCAACAAA+AGG | - | chr8_1:24394533-24394552 | Msa1186290:intron | 25.0% |
| ! | CATTTCAAATACCAACAAAA+GGG | - | chr8_1:24394534-24394553 | Msa1186290:intron | 25.0% |
| ! | TCTATTCTCTAAGCAAAATT+TGG | - | chr8_1:24394772-24394791 | Msa1186290:intron | 25.0% |
| ! | CAACTTATAGCATTATAGTT+AGG | - | chr8_1:24395007-24395026 | Msa1186290:intron | 25.0% |
| ! | AATAATACATGGTAACATTG+TGG | - | chr8_1:24395196-24395215 | Msa1186290:intron | 25.0% |
| !!! | TCAATATTTTTATGTGTCTG+AGG | + | chr8_1:24395222-24395241 | None:intergenic | 25.0% |
| !! | TGAATGATTTTGAATTGTGT+AGG | - | chr8_1:24395296-24395315 | Msa1186290:intron | 25.0% |
| !!! | AAGAGTGTTATCACAATTTT+GGG | - | chr8_1:24395335-24395354 | Msa1186290:intron | 25.0% |
| ! | ACAAATCAGAAAATCTTATC+AGG | - | chr8_1:24395382-24395401 | Msa1186290:intron | 25.0% |
| !!! | TGATTAGCTTAAGACATAAT+AGG | + | chr8_1:24395528-24395547 | None:intergenic | 25.0% |
| !!! | ATGTACTCGTTTTTTTTTTC+CGG | - | chr8_1:24395878-24395897 | Msa1186290:CDS | 25.0% |
| ! | TATTCTTCATGAATCAATCA+AGG | - | chr8_1:24395988-24396007 | Msa1186290:intron | 25.0% |
| !!! | ACTTTTTTTCACCTTAGTTA+TGG | + | chr8_1:24396116-24396135 | None:intergenic | 25.0% |
| !! | GATAAGAATTTTTGTGAACA+TGG | + | chr8_1:24396180-24396199 | None:intergenic | 25.0% |
| ! | GGTGGAATTACAAAATTTAA+TGG | - | chr8_1:24396803-24396822 | Msa1186290:intron | 25.0% |
| ! | ATTCTCTTAATATGTTGGAT+TGG | + | chr8_1:24396863-24396882 | None:intergenic | 25.0% |
| !! | GTTAACTACAGTTGAATTTT+TGG | + | chr8_1:24397227-24397246 | None:intergenic | 25.0% |
| ! | CTGACTTATAACTAGAATAT+AGG | + | chr8_1:24397255-24397274 | None:intergenic | 25.0% |
| !! | ATATTCTAGTTATAAGTCAG+CGG | - | chr8_1:24397255-24397274 | Msa1186290:intron | 25.0% |
| ! | ACATCTGTTAAGCTTAAATA+GGG | + | chr8_1:24397551-24397570 | None:intergenic | 25.0% |
| ! | TACATCTGTTAAGCTTAAAT+AGG | + | chr8_1:24397552-24397571 | None:intergenic | 25.0% |
| !! | AGAGTTTTCACAATTTTTGA+TGG | - | chr8_1:24397611-24397630 | Msa1186290:intron | 25.0% |
| TCAAAAAATGTGACACATGA+AGG | + | chr8_1:24393957-24393976 | None:intergenic | 30.0% | |
| AAGAAGAAGAAGAAGATTCA+TGG | + | chr8_1:24394086-24394105 | None:intergenic | 30.0% | |
| TTGAGAACATTAAAAGGTCA+GGG | + | chr8_1:24394161-24394180 | None:intergenic | 30.0% | |
| TTTGAGAACATTAAAAGGTC+AGG | + | chr8_1:24394162-24394181 | None:intergenic | 30.0% | |
| ! | GACCTTTTAATGTTCTCAAA+TGG | - | chr8_1:24394162-24394181 | Msa1186290:intron | 30.0% |
| ! | CCTTTTAATGTTCTCAAATG+GGG | - | chr8_1:24394164-24394183 | Msa1186290:intron | 30.0% |
| GTACTAAAACAGCTTATGTA+AGG | - | chr8_1:24394458-24394477 | Msa1186290:intron | 30.0% | |
| ! | ATTTGAAATGAGTGATGAGT+TGG | + | chr8_1:24394524-24394543 | None:intergenic | 30.0% |
| TCAGTAGGATATTGAAGAAT+CGG | + | chr8_1:24394587-24394606 | None:intergenic | 30.0% | |
| ACTGTATATATTGAAGAGCT+AGG | - | chr8_1:24394973-24394992 | Msa1186290:intron | 30.0% | |
| ! | TGATTTTGAATTGTGTAGGA+TGG | - | chr8_1:24395300-24395319 | Msa1186290:intron | 30.0% |
| ! | GATTTTGAATTGTGTAGGAT+GGG | - | chr8_1:24395301-24395320 | Msa1186290:intron | 30.0% |
| ! | ATTTTGAATTGTGTAGGATG+GGG | - | chr8_1:24395302-24395321 | Msa1186290:intron | 30.0% |
| !!! | GAAGAGTGTTATCACAATTT+TGG | - | chr8_1:24395334-24395353 | Msa1186290:intron | 30.0% |
| TTATCAGGAAATTTACCAAG+AGG | - | chr8_1:24395397-24395416 | Msa1186290:intron | 30.0% | |
| !! | AGTCGATATTTTGAATAACG+TGG | - | chr8_1:24395547-24395566 | Msa1186290:CDS | 30.0% |
| GAATCAATCAAGGAGAAAAA+AGG | - | chr8_1:24395998-24396017 | Msa1186290:CDS | 30.0% | |
| ! | CCTTTTCATAGTACTTCTTA+TGG | + | chr8_1:24396287-24396306 | None:intergenic | 30.0% |
| !! | CCATAAGAAGTACTATGAAA+AGG | - | chr8_1:24396284-24396303 | Msa1186290:intron | 30.0% |
| ! | TCTGACTTTCAATTTGTTCA+AGG | - | chr8_1:24396317-24396336 | Msa1186290:intron | 30.0% |
| ! | TTACAAGTTTTTGTCTGAGA+CGG | + | chr8_1:24396355-24396374 | None:intergenic | 30.0% |
| ! | ATAATGGGATTTGGATATGT+TGG | - | chr8_1:24396663-24396682 | Msa1186290:CDS | 30.0% |
| !! | ATATGTTGGTTTCTTTCTTG+TGG | - | chr8_1:24396677-24396696 | Msa1186290:CDS | 30.0% |
| ! | TATCATGTTTTCATGAGTCA+TGG | - | chr8_1:24396726-24396745 | Msa1186290:CDS | 30.0% |
| ATTACTAGTTGAATGAATGG+TGG | - | chr8_1:24396785-24396804 | Msa1186290:intron | 30.0% | |
| ACATGAATGGAGGAAAATAT+TGG | - | chr8_1:24397048-24397067 | Msa1186290:intron | 30.0% | |
| !! | CATGTGTTTCTAGAAAACAA+CGG | - | chr8_1:24397313-24397332 | Msa1186290:intron | 30.0% |
| GGTCTAAATCTAAATGATGT+AGG | - | chr8_1:24397418-24397437 | Msa1186290:intron | 30.0% | |
| GGAAATAACAAAACCCTAAT+AGG | + | chr8_1:24397530-24397549 | None:intergenic | 30.0% | |
| !!! | TCACAATTTTTGATGGATTC+CGG | - | chr8_1:24397618-24397637 | Msa1186290:intron | 30.0% |
| AATCACGTTAGAAAAAGAAC+AGG | + | chr8_1:24397755-24397774 | None:intergenic | 30.0% | |
| !! | ATTGTTTCTGTTGTTGTTGT+TGG | + | chr8_1:24397882-24397901 | None:intergenic | 30.0% |
| TACAGTAAAATCATCTCCTG+TGG | - | chr8_1:24393803-24393822 | Msa1186290:CDS | 35.0% | |
| CCCCATTTGAGAACATTAAA+AGG | + | chr8_1:24394167-24394186 | None:intergenic | 35.0% | |
| ATAGCTGTAGAGCAATACAT+AGG | - | chr8_1:24394814-24394833 | Msa1186290:intron | 35.0% | |
| GCTCTTCAAAAAGCTTTCAA+AGG | - | chr8_1:24395096-24395115 | Msa1186290:intron | 35.0% | |
| TCAGCGATTATAACCAAGAT+TGG | + | chr8_1:24395268-24395287 | None:intergenic | 35.0% | |
| ! | TTTTGAATTGTGTAGGATGG+GGG | - | chr8_1:24395303-24395322 | Msa1186290:intron | 35.0% |
| ! | AGATGATTTAATGACTTGCC+TGG | + | chr8_1:24395802-24395821 | None:intergenic | 35.0% |
| TTGGTGAGCTCATTTAGATA+TGG | - | chr8_1:24395923-24395942 | Msa1186290:intron | 35.0% | |
| TACTGAGATCAATCCGAAAT+TGG | - | chr8_1:24395949-24395968 | Msa1186290:intron | 35.0% | |
| ! | GCTTCAGTTTTTGCCAATTT+CGG | + | chr8_1:24395965-24395984 | None:intergenic | 35.0% |
| CCTTGTAGTAAGGATTCTAA+TGG | + | chr8_1:24396038-24396057 | None:intergenic | 35.0% | |
| CCATTAGAATCCTTACTACA+AGG | - | chr8_1:24396035-24396054 | Msa1186290:CDS | 35.0% | |
| AAGTTCATCCTTACCTTGTT+GGG | - | chr8_1:24396594-24396613 | Msa1186290:intron | 35.0% | |
| TGAAGAAATTGCTCTTGCTA+AGG | - | chr8_1:24396627-24396646 | Msa1186290:intron | 35.0% | |
| TTGGTTTCTTTCTTGTGGTA+TGG | - | chr8_1:24396682-24396701 | Msa1186290:CDS | 35.0% | |
| TTCTTTCTTGTGGTATGGTT+TGG | - | chr8_1:24396687-24396706 | Msa1186290:CDS | 35.0% | |
| GAATGACCAATGAACATGAA+TGG | - | chr8_1:24397035-24397054 | Msa1186290:intron | 35.0% | |
| TTTCCTCCATTCATGTTCAT+TGG | + | chr8_1:24397044-24397063 | None:intergenic | 35.0% | |
| !!! | CAAGCTTCATTGGCTTTTAA+GGG | + | chr8_1:24397162-24397181 | None:intergenic | 35.0% |
| !!! | ACAAGCTTCATTGGCTTTTA+AGG | + | chr8_1:24397163-24397182 | None:intergenic | 35.0% |
| GTGAAAACAACAAGCTTCAT+TGG | + | chr8_1:24397172-24397191 | None:intergenic | 35.0% | |
| !! | CGTTGTTTTCTAGAAACACA+TGG | + | chr8_1:24397315-24397334 | None:intergenic | 35.0% |
| ATTCTCAAAGCCAATTGCAT+TGG | - | chr8_1:24397350-24397369 | Msa1186290:intron | 35.0% | |
| CAAAGTCATGAATAGTTGGT+GGG | + | chr8_1:24397399-24397418 | None:intergenic | 35.0% | |
| AGACCAAAGTCATGAATAGT+TGG | + | chr8_1:24397403-24397422 | None:intergenic | 35.0% | |
| CTTAACAGATGTAGTCTAAG+AGG | - | chr8_1:24397559-24397578 | Msa1186290:intron | 35.0% | |
| GCAACAGACTTGTGAAAATA+GGG | + | chr8_1:24397646-24397665 | None:intergenic | 35.0% | |
| AGCAACAGACTTGTGAAAAT+AGG | + | chr8_1:24397647-24397666 | None:intergenic | 35.0% | |
| ! | AACTTGTTCCATTTCGATCT+AGG | - | chr8_1:24397671-24397690 | Msa1186290:intron | 35.0% |
| !! | TTTTCTAACGTGATTAGCCA+TGG | - | chr8_1:24397760-24397779 | Msa1186290:intron | 35.0% |
| ! | TTTCTAACGTGATTAGCCAT+GGG | - | chr8_1:24397761-24397780 | Msa1186290:intron | 35.0% |
| !!! | TTTTGTCGTCAAAGCATTGA+TGG | + | chr8_1:24397825-24397844 | None:intergenic | 35.0% |
| CAATGCTTTGACGACAAAAT+TGG | - | chr8_1:24397826-24397845 | Msa1186290:intron | 35.0% | |
| ACAACAGAAACAATCAGAAC+AGG | - | chr8_1:24397888-24397907 | Msa1186290:intron | 35.0% | |
| CAACAGAAACAATCAGAACA+GGG | - | chr8_1:24397889-24397908 | Msa1186290:intron | 35.0% | |
| AACAGAAACAATCAGAACAG+GGG | - | chr8_1:24397890-24397909 | Msa1186290:intron | 35.0% | |
| !! | ATTTGATTGTTTCTACCACG+TGG | + | chr8_1:24397935-24397954 | None:intergenic | 35.0% |
| ACATACTCGTGAATCTGATT+TGG | - | chr8_1:24398012-24398031 | Msa1186290:intron | 35.0% | |
| TCACTAGCAATACTAACATC+AGG | + | chr8_1:24398279-24398298 | None:intergenic | 35.0% | |
| ! | GCTCTCCAAAAGGCTTTTAA+AGG | - | chr8_1:24393837-24393856 | Msa1186290:CDS | 40.0% |
| GTAGGATATTGAAGAATCGG+AGG | + | chr8_1:24394584-24394603 | None:intergenic | 40.0% | |
| TATTGATGTTGCGGTCCAAA+TGG | - | chr8_1:24395236-24395255 | Msa1186290:intron | 40.0% | |
| CAAGATTGGCATATGCCATT+TGG | + | chr8_1:24395254-24395273 | None:intergenic | 40.0% | |
| CAAATGGCATATGCCAATCT+TGG | - | chr8_1:24395252-24395271 | Msa1186290:intron | 40.0% | |
| TTTGGCGAATATAGCCATCA+AGG | - | chr8_1:24395631-24395650 | Msa1186290:CDS | 40.0% | |
| ! | ACTTTTGCTTCCATCCTTGA+TGG | + | chr8_1:24395648-24395667 | None:intergenic | 40.0% |
| ! | TCTTTCACCTGAAGAAGTGT+TGG | - | chr8_1:24395697-24395716 | Msa1186290:intron | 40.0% |
| !!! | CGTTTTTTTTTTCCGGCTCT+TGG | - | chr8_1:24395885-24395904 | Msa1186290:intron | 40.0% |
| GTGAGCTCATTTAGATATGG+TGG | - | chr8_1:24395926-24395945 | Msa1186290:intron | 40.0% | |
| GGATTCTAATGGCTTCTTCA+TGG | + | chr8_1:24396027-24396046 | None:intergenic | 40.0% | |
| CCTTAGTTATGGAAATGCCA+TGG | + | chr8_1:24396105-24396124 | None:intergenic | 40.0% | |
| CCATGGCATTTCCATAACTA+AGG | - | chr8_1:24396102-24396121 | Msa1186290:CDS | 40.0% | |
| TCCTTGATTACAGAAACTGC+TGG | - | chr8_1:24396203-24396222 | Msa1186290:intron | 40.0% | |
| TCCAGCAGTTTCTGTAATCA+AGG | + | chr8_1:24396207-24396226 | None:intergenic | 40.0% | |
| TGCATCTGATGACTTTCACA+AGG | - | chr8_1:24396230-24396249 | Msa1186290:intron | 40.0% | |
| CATGATGTTTAGATTCTGCG+CGG | - | chr8_1:24396414-24396433 | Msa1186290:CDS | 40.0% | |
| GATGTCCTTCAGATCTTTCT+CGG | + | chr8_1:24396499-24396518 | None:intergenic | 40.0% | |
| GAAGTTCATCCTTACCTTGT+TGG | - | chr8_1:24396593-24396612 | Msa1186290:intron | 40.0% | |
| AGTTCATCCTTACCTTGTTG+GGG | - | chr8_1:24396595-24396614 | Msa1186290:intron | 40.0% | |
| ACCAGTTGAATGTGCATTCA+AGG | - | chr8_1:24396982-24397001 | Msa1186290:intron | 40.0% | |
| CCAGTTGAATGTGCATTCAA+GGG | - | chr8_1:24396983-24397002 | Msa1186290:intron | 40.0% | |
| CAGTTGAATGTGCATTCAAG+GGG | - | chr8_1:24396984-24397003 | Msa1186290:intron | 40.0% | |
| TGACCAATGAACATGAATGG+AGG | - | chr8_1:24397038-24397057 | Msa1186290:intron | 40.0% | |
| !! | CATGTGTTTCTAGGAAACAC+TGG | + | chr8_1:24397197-24397216 | None:intergenic | 40.0% |
| CAGTGTTTCCTAGAAACACA+TGG | - | chr8_1:24397195-24397214 | Msa1186290:intron | 40.0% | |
| GGTCATTTCCATGTGTTTCT+AGG | + | chr8_1:24397304-24397323 | None:intergenic | 40.0% | |
| AATGACCAAAAACACCCCAA+CGG | + | chr8_1:24397291-24397310 | None:intergenic | 40.0% | |
| GTTATCTAGGCCAATGCAAT+TGG | + | chr8_1:24397363-24397382 | None:intergenic | 40.0% | |
| ACCAGAATGCTTGGTTATCT+AGG | + | chr8_1:24397376-24397395 | None:intergenic | 40.0% | |
| CCAAAGTCATGAATAGTTGG+TGG | + | chr8_1:24397400-24397419 | None:intergenic | 40.0% | |
| CCACCAACTATTCATGACTT+TGG | - | chr8_1:24397397-24397416 | Msa1186290:intron | 40.0% | |
| GACTTGTGAAAATAGGGTTC+CGG | + | chr8_1:24397640-24397659 | None:intergenic | 40.0% | |
| GCACTAAACCTAGATCGAAA+TGG | + | chr8_1:24397682-24397701 | None:intergenic | 40.0% | |
| !!! | AAAGCTGCTACTTTTGTCAC+CGG | + | chr8_1:24397794-24397813 | None:intergenic | 40.0% |
| GGCAATGTTAACAACTCAGA+TGG | - | chr8_1:24397847-24397866 | Msa1186290:intron | 40.0% | |
| ACAGGGGATATGAACCAATT+AGG | - | chr8_1:24397906-24397925 | Msa1186290:intron | 40.0% | |
| CAGGGGATATGAACCAATTA+GGG | - | chr8_1:24397907-24397926 | Msa1186290:intron | 40.0% | |
| !! | TGAGGAGTCGAATTTTTCAG+AGG | - | chr8_1:24397958-24397977 | Msa1186290:intron | 40.0% |
| ! | TTCTGGAAGCATGTCTCAAA+AGG | + | chr8_1:24398153-24398172 | None:intergenic | 40.0% |
| ! | TTTGAGACATGCTTCCAGAA+TGG | - | chr8_1:24398153-24398172 | Msa1186290:intron | 40.0% |
| CTAGCAATACTAACATCAGG+TGG | + | chr8_1:24398276-24398295 | None:intergenic | 40.0% | |
| !! | GTGGTTGATGGGAGCAATAA+GGG | + | chr8_1:24395055-24395074 | None:intergenic | 45.0% |
| !! | AGTGGTTGATGGGAGCAATA+AGG | + | chr8_1:24395056-24395075 | None:intergenic | 45.0% |
| ! | GTTCAGATTCAAGGCGTTTG+AGG | + | chr8_1:24395427-24395446 | None:intergenic | 45.0% |
| CACCAGAGAGTTCAGATTCA+AGG | + | chr8_1:24395436-24395455 | None:intergenic | 45.0% | |
| ! | GAACTCTCTGGTGACTTTTG+AGG | - | chr8_1:24395443-24395462 | Msa1186290:intron | 45.0% |
| GCGAATATAGCCATCAAGGA+TGG | - | chr8_1:24395635-24395654 | Msa1186290:CDS | 45.0% | |
| CTCATTGCCAACACTTCTTC+AGG | + | chr8_1:24395707-24395726 | None:intergenic | 45.0% | |
| GATTTAGCTGCTCATACCAC+CGG | - | chr8_1:24395767-24395786 | Msa1186290:intron | 45.0% | |
| GAGTCTTGCTCCTTGTAGTA+AGG | + | chr8_1:24396048-24396067 | None:intergenic | 45.0% | |
| AACCGTTACAGAGATGACCA+TGG | - | chr8_1:24396085-24396104 | Msa1186290:CDS | 45.0% | |
| TGCCATGGTCATCTCTGTAA+CGG | + | chr8_1:24396090-24396109 | None:intergenic | 45.0% | |
| GTCATTGATGCATCGAATCG+CGG | + | chr8_1:24396265-24396284 | None:intergenic | 45.0% | |
| CGCGCAGAATCTAAACATCA+TGG | + | chr8_1:24396416-24396435 | None:intergenic | 45.0% | |
| AGGGTTGGAACTGATGAAGA+TGG | - | chr8_1:24396447-24396466 | Msa1186290:CDS | 45.0% | |
| AAGAGCCGAGAAAGATCTGA+AGG | - | chr8_1:24396491-24396510 | Msa1186290:CDS | 45.0% | |
| GAGAAACAGTGTTCACCTTG+AGG | - | chr8_1:24396536-24396555 | Msa1186290:intron | 45.0% | |
| GCAGTGGCAAAGGAAATTTC+AGG | - | chr8_1:24396561-24396580 | Msa1186290:intron | 45.0% | |
| TCAATCTTGCTTCCCCAACA+AGG | + | chr8_1:24396610-24396629 | None:intergenic | 45.0% | |
| CCCTTGAATGCACATTCAAC+TGG | + | chr8_1:24396986-24397005 | None:intergenic | 45.0% | |
| AGCGGTAGTTAACTACCGTT+GGG | - | chr8_1:24397273-24397292 | Msa1186290:intron | 45.0% | |
| !! | AACTACCGTTGGGGTGTTTT+TGG | - | chr8_1:24397283-24397302 | Msa1186290:intron | 45.0% |
| GCCTAGATAACCAAGCATTC+TGG | - | chr8_1:24397372-24397391 | Msa1186290:intron | 45.0% | |
| ATTAGCCATGGGAGATCAAC+CGG | - | chr8_1:24397772-24397791 | Msa1186290:intron | 45.0% | |
| !! | GGAGTCGAATTTTTCAGAGG+TGG | - | chr8_1:24397961-24397980 | Msa1186290:intron | 45.0% |
| ! | GGAAGCATGTCTCAAAAGGT+CGG | + | chr8_1:24398149-24398168 | None:intergenic | 45.0% |
| ATTGCTAGTGATAAGCCACC+TGG | - | chr8_1:24398288-24398307 | Msa1186290:CDS | 45.0% | |
| AGTGATAAGCCACCTGGTAT+CGG | - | chr8_1:24398294-24398313 | Msa1186290:CDS | 45.0% | |
| !!! | ATTTGATTATTTTAATTTTA+AGG | + | chr8_1:24395835-24395854 | None:intergenic | 5.0% |
| !! | AAAATTAAAATAATCAAATT+AGG | - | chr8_1:24395836-24395855 | Msa1186290:CDS | 5.0% |
| GCAACAGCAGAGTGGTTGAT+GGG | + | chr8_1:24395066-24395085 | None:intergenic | 50.0% | |
| TGCAACAGCAGAGTGGTTGA+TGG | + | chr8_1:24395067-24395086 | None:intergenic | 50.0% | |
| GGCGTTTGAGGATATCCTCT+TGG | + | chr8_1:24395415-24395434 | None:intergenic | 50.0% | |
| CGCCTTGAATCTGAACTCTC+TGG | - | chr8_1:24395431-24395450 | Msa1186290:intron | 50.0% | |
| ATCAGAGAGCTGTGTACCGT+TGG | - | chr8_1:24395579-24395598 | Msa1186290:CDS | 50.0% | |
| AAAACAGCATCGCGATCAGC+AGG | + | chr8_1:24395614-24395633 | None:intergenic | 50.0% | |
| !! | TGCTGATCGCGATGCTGTTT+TGG | - | chr8_1:24395613-24395632 | Msa1186290:CDS | 50.0% |
| ! | TTGGCAGCTGTTGGTTGGAT+TGG | - | chr8_1:24395904-24395923 | Msa1186290:intron | 50.0% |
| AAGGAGCAAGACTCAGCTGT+TGG | - | chr8_1:24396054-24396073 | Msa1186290:CDS | 50.0% | |
| !! | TGAAGATGGACTGACTCGTG+TGG | - | chr8_1:24396461-24396480 | Msa1186290:CDS | 50.0% |
| TGTTCACCTTGAGGATGCAG+TGG | - | chr8_1:24396545-24396564 | Msa1186290:intron | 50.0% | |
| CTTGCTTCCCCAACAAGGTA+AGG | + | chr8_1:24396605-24396624 | None:intergenic | 50.0% | |
| CAGCGGTAGTTAACTACCGT+TGG | - | chr8_1:24397272-24397291 | Msa1186290:intron | 50.0% | |
| GCGGTAGTTAACTACCGTTG+GGG | - | chr8_1:24397274-24397293 | Msa1186290:intron | 50.0% | |
| CTGATACCAACTGACGCAGT+CGG | + | chr8_1:24397721-24397740 | None:intergenic | 50.0% | |
| !! | CGTCAAAGCATTGATGGTCG+CGG | + | chr8_1:24397819-24397838 | None:intergenic | 50.0% |
| ACGCGAGTTACTTGCCATTC+TGG | + | chr8_1:24398170-24398189 | None:intergenic | 50.0% | |
| GGCAAGTAACTCGCGTATGA+CGG | - | chr8_1:24398174-24398193 | Msa1186290:intron | 50.0% | |
| CCAACAATACCGATACCAGG+TGG | + | chr8_1:24398306-24398325 | None:intergenic | 50.0% | |
| !! | CCACCTGGTATCGGTATTGT+TGG | - | chr8_1:24398303-24398322 | Msa1186290:CDS | 50.0% |
| !! | CCTGGTATCGGTATTGTTGG+CGG | - | chr8_1:24398306-24398325 | Msa1186290:CDS | 50.0% |
| !! | CTGGTATCGGTATTGTTGGC+GGG | - | chr8_1:24398307-24398326 | Msa1186290:exon | 50.0% |
| ATCTCCTGTGGAAGACGCTG+AGG | - | chr8_1:24393815-24393834 | Msa1186290:CDS | 55.0% | |
| AGACGCTGAGGCTCTCCAAA+AGG | - | chr8_1:24393827-24393846 | Msa1186290:CDS | 55.0% | |
| CTGCATCTGCAACAGCAGAG+TGG | + | chr8_1:24395074-24395093 | None:intergenic | 55.0% | |
| AGCTGTGTACCGTTGGATGC+TGG | - | chr8_1:24395586-24395605 | Msa1186290:CDS | 55.0% | |
| CAGCAGGTTCCAGCATCCAA+CGG | + | chr8_1:24395598-24395617 | None:intergenic | 55.0% | |
| ACTTGCCTGGCGAAGATGAC+CGG | + | chr8_1:24395789-24395808 | None:intergenic | 55.0% | |
| AACCAACAGCTGCCAAGAGC+CGG | + | chr8_1:24395900-24395919 | None:intergenic | 55.0% | |
| CCTTTGCCACTGCATCCTCA+AGG | + | chr8_1:24396554-24396573 | None:intergenic | 55.0% | |
| CCTTGAGGATGCAGTGGCAA+AGG | - | chr8_1:24396551-24396570 | Msa1186290:intron | 55.0% | |
| ! | GTTGGTGGGACCAGAATGCT+TGG | + | chr8_1:24397385-24397404 | None:intergenic | 55.0% |
| ! | ACTGACGCAGTCGGAAGCAT+AGG | + | chr8_1:24397712-24397731 | None:intergenic | 55.0% |
| ATGCTTCCGACTGCGTCAGT+TGG | - | chr8_1:24397712-24397731 | Msa1186290:intron | 55.0% | |
| ! | GCGTCAGTTGGTATCAGAGC+AGG | - | chr8_1:24397724-24397743 | Msa1186290:intron | 55.0% |
| ! | TGTCACCGGTTGATCTCCCA+TGG | + | chr8_1:24397780-24397799 | None:intergenic | 55.0% |
| GAACCAATTAGGGCTCCACG+TGG | - | chr8_1:24397917-24397936 | Msa1186290:intron | 55.0% | |
| CTACCACGTGGAGCCCTAAT+TGG | + | chr8_1:24397923-24397942 | None:intergenic | 55.0% | |
| CCGCCAACAATACCGATACC+AGG | + | chr8_1:24398309-24398328 | None:intergenic | 55.0% | |
| AGAGCCTCAGCGTCTTCCAC+AGG | + | chr8_1:24393822-24393841 | None:intergenic | 60.0% | |
| TACCACCGGTCATCTTCGCC+AGG | - | chr8_1:24395781-24395800 | Msa1186290:intron | 60.0% | |
| TTCCGGCTCTTGGCAGCTGT+TGG | - | chr8_1:24395895-24395914 | Msa1186290:intron | 60.0% | |
| GGCTCTTGGCAGCTGTTGGT+TGG | - | chr8_1:24395899-24395918 | Msa1186290:intron | 60.0% | |
| TTCTGCGCGGTGCGCTGAAA+AGG | - | chr8_1:24396427-24396446 | Msa1186290:CDS | 60.0% | |
| TCTGCGCGGTGCGCTGAAAA+GGG | - | chr8_1:24396428-24396447 | Msa1186290:CDS | 60.0% | |
| TGCCTGGCGAAGATGACCGG+TGG | + | chr8_1:24395786-24395805 | None:intergenic | 65.0% | |
| CGCGGTGCGCTGAAAAGGGT+TGG | - | chr8_1:24396432-24396451 | Msa1186290:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 24393770 | 24398344 | 24393770 | ID=Msa1186290;Name=Msa1186290 |
| chr8_1 | mRNA | 24393770 | 24398344 | 24393770 | ID=Msa1186290-mRNA-1;Parent=Msa1186290;Name=Msa1186290-mRNA-1;_AED=0.39;_eAED=0.39;_QI=19|0.5|0.28|1|0.5|0.42|7|0|306 |
| chr8_1 | exon | 24393770 | 24393872 | 24393770 | ID=Msa1186290-mRNA-1:exon:8893;Parent=Msa1186290-mRNA-1 |
| chr8_1 | exon | 24395504 | 24395688 | 24395504 | ID=Msa1186290-mRNA-1:exon:8892;Parent=Msa1186290-mRNA-1 |
| chr8_1 | exon | 24395809 | 24395898 | 24395809 | ID=Msa1186290-mRNA-1:exon:8891;Parent=Msa1186290-mRNA-1 |
| chr8_1 | exon | 24395991 | 24396203 | 24395991 | ID=Msa1186290-mRNA-1:exon:8890;Parent=Msa1186290-mRNA-1 |
| chr8_1 | exon | 24396402 | 24396526 | 24396402 | ID=Msa1186290-mRNA-1:exon:8889;Parent=Msa1186290-mRNA-1 |
| chr8_1 | exon | 24396662 | 24396796 | 24396662 | ID=Msa1186290-mRNA-1:exon:8888;Parent=Msa1186290-mRNA-1 |
| chr8_1 | exon | 24398256 | 24398344 | 24398256 | ID=Msa1186290-mRNA-1:exon:8887;Parent=Msa1186290-mRNA-1 |
| chr8_1 | five_prime_UTR | 24398326 | 24398344 | 24398326 | ID=Msa1186290-mRNA-1:five_prime_utr;Parent=Msa1186290-mRNA-1 |
| chr8_1 | CDS | 24398256 | 24398325 | 24398256 | ID=Msa1186290-mRNA-1:cds;Parent=Msa1186290-mRNA-1 |
| chr8_1 | CDS | 24396662 | 24396796 | 24396662 | ID=Msa1186290-mRNA-1:cds;Parent=Msa1186290-mRNA-1 |
| chr8_1 | CDS | 24396402 | 24396526 | 24396402 | ID=Msa1186290-mRNA-1:cds;Parent=Msa1186290-mRNA-1 |
| chr8_1 | CDS | 24395991 | 24396203 | 24395991 | ID=Msa1186290-mRNA-1:cds;Parent=Msa1186290-mRNA-1 |
| chr8_1 | CDS | 24395809 | 24395898 | 24395809 | ID=Msa1186290-mRNA-1:cds;Parent=Msa1186290-mRNA-1 |
| chr8_1 | CDS | 24395504 | 24395688 | 24395504 | ID=Msa1186290-mRNA-1:cds;Parent=Msa1186290-mRNA-1 |
| chr8_1 | CDS | 24393770 | 24393872 | 24393770 | ID=Msa1186290-mRNA-1:cds;Parent=Msa1186290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
