Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0940910 | sp|Q9SWS1|ACFR2_ARATH | 69.196 | 224 | 69 | 0 | 1 | 224 | 1 | 224 | 2.30e-110 | 319 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0940910 | G7ZY50 | 97.414 | 232 | 6 | 0 | 1 | 232 | 1 | 232 | 2.77e-161 | 454 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005380 | Msa0940910 | 0.806237 | 9.067862e-50 | -8.615850e-47 |
| Msa0026780 | Msa0940910 | 0.811642 | 6.321784e-51 | -8.615850e-47 |
| Msa0029520 | Msa0940910 | -0.801618 | 8.270984e-49 | -8.615850e-47 |
| Msa0032710 | Msa0940910 | 0.824676 | 7.092870e-54 | -8.615850e-47 |
| Msa0033220 | Msa0940910 | 0.818518 | 1.879703e-52 | -8.615850e-47 |
| Msa0033840 | Msa0940910 | -0.818351 | 2.051097e-52 | -8.615850e-47 |
| Msa0063940 | Msa0940910 | 0.821726 | 3.463209e-53 | -8.615850e-47 |
| Msa0081610 | Msa0940910 | -0.810872 | 9.285231e-51 | -8.615850e-47 |
| Msa0095940 | Msa0940910 | 0.814078 | 1.850371e-51 | -8.615850e-47 |
| Msa0101530 | Msa0940910 | 0.800634 | 1.314386e-48 | -8.615850e-47 |
| Msa0603310 | Msa0940910 | 0.819309 | 1.242668e-52 | -8.615850e-47 |
| Msa0610690 | Msa0940910 | 0.836779 | 7.659176e-57 | -8.615850e-47 |
| Msa0626920 | Msa0940910 | 0.803084 | 4.126484e-49 | -8.615850e-47 |
| Msa0657710 | Msa0940910 | 0.857515 | 1.548615e-62 | -8.615850e-47 |
| Msa0657720 | Msa0940910 | 0.833481 | 5.203519e-56 | -8.615850e-47 |
| Msa0682160 | Msa0940910 | 0.809367 | 1.960105e-50 | -8.615850e-47 |
| Msa0702790 | Msa0940910 | 0.833396 | 5.464092e-56 | -8.615850e-47 |
| Msa0702800 | Msa0940910 | 0.850655 | 1.475376e-60 | -8.615850e-47 |
| Msa0712860 | Msa0940910 | 0.816895 | 4.367775e-52 | -8.615850e-47 |
| Msa0723090 | Msa0940910 | 0.806106 | 9.663342e-50 | -8.615850e-47 |
| Msa0742370 | Msa0940910 | -0.825395 | 4.798166e-54 | -8.615850e-47 |
| Msa0744640 | Msa0940910 | 0.808584 | 2.882399e-50 | -8.615850e-47 |
| Msa0771790 | Msa0940910 | 0.809176 | 2.153281e-50 | -8.615850e-47 |
| Msa0779450 | Msa0940910 | -0.817925 | 2.560196e-52 | -8.615850e-47 |
| Msa0800150 | Msa0940910 | 0.813336 | 2.695258e-51 | -8.615850e-47 |
| Msa0800180 | Msa0940910 | 0.818461 | 1.937258e-52 | -8.615850e-47 |
| Msa0800480 | Msa0940910 | 0.834171 | 3.496864e-56 | -8.615850e-47 |
| Msa0823480 | Msa0940910 | -0.814894 | 1.221107e-51 | -8.615850e-47 |
| Msa0828950 | Msa0940910 | 0.836399 | 9.572013e-57 | -8.615850e-47 |
| Msa0828960 | Msa0940910 | 0.855488 | 6.098635e-62 | -8.615850e-47 |
| Msa0833270 | Msa0940910 | 0.813752 | 2.183229e-51 | -8.615850e-47 |
| Msa0841730 | Msa0940910 | 0.808922 | 2.440666e-50 | -8.615850e-47 |
| Msa0130500 | Msa0940910 | 0.809687 | 1.673045e-50 | -8.615850e-47 |
| Msa0168410 | Msa0940910 | -0.801259 | 9.797082e-49 | -8.615850e-47 |
| Msa0173950 | Msa0940910 | -0.814458 | 1.524960e-51 | -8.615850e-47 |
| Msa0219280 | Msa0940910 | 0.816341 | 5.814270e-52 | -8.615850e-47 |
| Msa0365210 | Msa0940910 | 0.825729 | 4.000109e-54 | -8.615850e-47 |
| Msa0376430 | Msa0940910 | 0.837977 | 3.779680e-57 | -8.615850e-47 |
| Msa0402070 | Msa0940910 | -0.822886 | 1.863045e-53 | -8.615850e-47 |
| Msa0405470 | Msa0940910 | -0.818094 | 2.344933e-52 | -8.615850e-47 |
| Msa0405550 | Msa0940910 | -0.808372 | 3.198543e-50 | -8.615850e-47 |
| Msa0457560 | Msa0940910 | 0.804814 | 1.803319e-49 | -8.615850e-47 |
| Msa0457570 | Msa0940910 | 0.819363 | 1.208250e-52 | -8.615850e-47 |
| Msa0480900 | Msa0940910 | -0.839635 | 1.408652e-57 | -8.615850e-47 |
| Msa0256920 | Msa0940910 | 0.805703 | 1.174500e-49 | -8.615850e-47 |
| Msa0269170 | Msa0940910 | -0.806487 | 8.032561e-50 | -8.615850e-47 |
| Msa0293720 | Msa0940910 | 0.820982 | 5.144147e-53 | -8.615850e-47 |
| Msa0313900 | Msa0940910 | 0.804291 | 2.317779e-49 | -8.615850e-47 |
| Msa0339100 | Msa0940910 | 0.808716 | 2.701131e-50 | -8.615850e-47 |
| Msa0355080 | Msa0940910 | -0.832413 | 9.590490e-56 | -8.615850e-47 |
| Msa0483970 | Msa0940910 | -0.810927 | 9.037914e-51 | -8.615850e-47 |
| Msa0512630 | Msa0940910 | 0.804195 | 2.427472e-49 | -8.615850e-47 |
| Msa0513970 | Msa0940910 | 0.802290 | 6.018452e-49 | -8.615850e-47 |
| Msa0516250 | Msa0940910 | 0.821140 | 4.730447e-53 | -8.615850e-47 |
| Msa0529110 | Msa0940910 | 0.839964 | 1.156199e-57 | -8.615850e-47 |
| Msa0535400 | Msa0940910 | 0.822218 | 2.665024e-53 | -8.615850e-47 |
| Msa0579160 | Msa0940910 | 0.821459 | 3.991907e-53 | -8.615850e-47 |
| Msa0579220 | Msa0940910 | 0.822302 | 2.547530e-53 | -8.615850e-47 |
| Msa0581350 | Msa0940910 | 0.802097 | 6.595640e-49 | -8.615850e-47 |
| Msa0590620 | Msa0940910 | -0.833866 | 4.168629e-56 | -8.615850e-47 |
| Msa0592330 | Msa0940910 | 0.818891 | 1.547249e-52 | -8.615850e-47 |
| Msa0595270 | Msa0940910 | 0.842963 | 1.875398e-58 | -8.615850e-47 |
| Msa0862480 | Msa0940910 | -0.828437 | 8.996185e-55 | -8.615850e-47 |
| Msa0867660 | Msa0940910 | -0.808364 | 3.212421e-50 | -8.615850e-47 |
| Msa0907880 | Msa0940910 | 0.800733 | 1.255021e-48 | -8.615850e-47 |
| Msa0908470 | Msa0940910 | -0.801301 | 9.607035e-49 | -8.615850e-47 |
| Msa0908630 | Msa0940910 | -0.801434 | 9.020881e-49 | -8.615850e-47 |
| Msa0908700 | Msa0940910 | -0.803200 | 3.905355e-49 | -8.615850e-47 |
| Msa0909260 | Msa0940910 | 0.811338 | 7.361537e-51 | -8.615850e-47 |
| Msa0924900 | Msa0940910 | -0.807348 | 5.280577e-50 | -8.615850e-47 |
| Msa0940910 | Msa0946330 | 0.849720 | 2.697432e-60 | -8.615850e-47 |
| Msa0940910 | Msa0964020 | 0.820249 | 7.578599e-53 | -8.615850e-47 |
| Msa0940910 | Msa0969380 | 0.816803 | 4.580665e-52 | -8.615850e-47 |
| Msa0940910 | Msa0969720 | 0.828196 | 1.028229e-54 | -8.615850e-47 |
| Msa0940910 | Msa0983600 | -0.809381 | 1.946031e-50 | -8.615850e-47 |
| Msa0940910 | Msa0983610 | -0.806486 | 8.037476e-50 | -8.615850e-47 |
| Msa0940910 | Msa1019420 | 0.845241 | 4.592029e-59 | -8.615850e-47 |
| Msa0940910 | Msa1039100 | 0.815100 | 1.098809e-51 | -8.615850e-47 |
| Msa0940910 | Msa1086940 | -0.804573 | 2.024989e-49 | -8.615850e-47 |
| Msa0940910 | Msa1087070 | -0.808333 | 3.260456e-50 | -8.615850e-47 |
| Msa0940910 | Msa1087090 | -0.803410 | 3.532688e-49 | -8.615850e-47 |
| Msa0940910 | Msa1094810 | 0.805728 | 1.160599e-49 | -8.615850e-47 |
| Msa0940910 | Msa1154320 | 0.823671 | 1.221719e-53 | -8.615850e-47 |
| Msa0940910 | Msa1184230 | 0.818503 | 1.894327e-52 | -8.615850e-47 |
| Msa0940910 | Msa1186290 | 0.826239 | 3.024988e-54 | -8.615850e-47 |
| Msa0940910 | Msa1187480 | 0.806707 | 7.216245e-50 | -8.615850e-47 |
| Msa0940910 | Msa1202800 | 0.816233 | 6.146851e-52 | -8.615850e-47 |
| Msa0940910 | Msa1207920 | -0.858730 | 6.738136e-63 | -8.615850e-47 |
| Msa0940910 | Msa1221270 | 0.807958 | 3.919001e-50 | -8.615850e-47 |
| Msa0940910 | Msa1238190 | 0.847746 | 9.517048e-60 | -8.615850e-47 |
| Msa0940910 | Msa1238600 | 0.822015 | 2.969705e-53 | -8.615850e-47 |
| Msa0940910 | Msa1238660 | 0.808847 | 2.533262e-50 | -8.615850e-47 |
| Msa0940910 | Msa1250610 | 0.812801 | 3.531337e-51 | -8.615850e-47 |
| Msa0940910 | Msa1255210 | 0.815049 | 1.127806e-51 | -8.615850e-47 |
| Msa0940910 | Msa1265520 | -0.808231 | 3.427873e-50 | -8.615850e-47 |
| Msa0940910 | Msa1268390 | 0.825494 | 4.546948e-54 | -8.615850e-47 |
| Msa0940910 | Msa1268420 | 0.824596 | 7.411066e-54 | -8.615850e-47 |
| Msa0940910 | Msa1284020 | 0.806016 | 1.009241e-49 | -8.615850e-47 |
| Msa0940910 | Msa1295650 | 0.805782 | 1.130434e-49 | -8.615850e-47 |
| Msa0940910 | Msa1322960 | 0.811124 | 8.191542e-51 | -8.615850e-47 |
| Msa0940910 | Msa1323010 | 0.849944 | 2.335566e-60 | -8.615850e-47 |
| Msa0940910 | Msa1323070 | 0.869999 | 2.031565e-66 | -8.615850e-47 |
| Msa0940910 | Msa1326640 | 0.805119 | 1.556630e-49 | -8.615850e-47 |
| Msa0940910 | Msa1326680 | 0.817567 | 3.083919e-52 | -8.615850e-47 |
| Msa0940910 | Msa1331570 | -0.847883 | 8.724113e-60 | -8.615850e-47 |
| Msa0940910 | Msa1354360 | -0.800779 | 1.227927e-48 | -8.615850e-47 |
| Msa0940910 | Msa1354400 | -0.801651 | 8.144057e-49 | -8.615850e-47 |
| Msa0940910 | Msa1354520 | -0.803316 | 3.695494e-49 | -8.615850e-47 |
| Msa0940910 | Msa1354660 | -0.802491 | 5.471531e-49 | -8.615850e-47 |
| Msa0940910 | Msa1354780 | -0.800636 | 1.313609e-48 | -8.615850e-47 |
| Msa0940910 | Msa1354790 | -0.805426 | 1.342313e-49 | -8.615850e-47 |
| Msa0940910 | Msa1354960 | -0.805197 | 1.499254e-49 | -8.615850e-47 |
| Msa0940910 | Msa1357070 | 0.818175 | 2.248531e-52 | -8.615850e-47 |
| Msa0940910 | Msa1358290 | 0.802983 | 4.329769e-49 | -8.615850e-47 |
| Msa0940910 | Msa1365990 | -0.801709 | 7.924191e-49 | -8.615850e-47 |
| Msa0940910 | Msa1366020 | -0.802777 | 4.776756e-49 | -8.615850e-47 |
| Msa0940910 | Msa1366030 | -0.802197 | 6.288441e-49 | -8.615850e-47 |
| Msa0940910 | Msa1366060 | -0.802945 | 4.408326e-49 | -8.615850e-47 |
| Msa0940910 | Msa1368260 | -0.804945 | 1.692669e-49 | -8.615850e-47 |
| Msa0940910 | Msa1384700 | 0.835405 | 1.710185e-56 | -8.615850e-47 |
| Msa0940910 | Msa1385360 | -0.803134 | 4.029135e-49 | -8.615850e-47 |
| Msa0940910 | Msa1385390 | -0.812297 | 4.551415e-51 | -8.615850e-47 |
| Msa0940910 | Msa1391130 | -0.801358 | 9.348183e-49 | -8.615850e-47 |
| Msa0940910 | Msa1391140 | -0.809755 | 1.617357e-50 | -8.615850e-47 |
| Msa0940910 | Msa1391260 | -0.802124 | 6.509848e-49 | -8.615850e-47 |
| Msa0940910 | Msa1392740 | 0.808085 | 3.682519e-50 | -8.615850e-47 |
| Msa0940910 | Msa1392980 | 0.801560 | 8.500353e-49 | -8.615850e-47 |
| Msa0940910 | Msa1404050 | 0.805834 | 1.102575e-49 | -8.615850e-47 |
| Msa0940910 | Msa1407840 | 0.800303 | 1.535365e-48 | -8.615850e-47 |
| Msa0940910 | Msa1408390 | 0.804244 | 2.370371e-49 | -8.615850e-47 |
| Msa0940910 | Msa1417380 | 0.800828 | 1.200252e-48 | -8.615850e-47 |
| Msa0940910 | Msa1422860 | 0.810039 | 1.405045e-50 | -8.615850e-47 |
| Msa0940910 | Msa1433360 | 0.828967 | 6.698454e-55 | -8.615850e-47 |
| Msa0940910 | Msa1433570 | 0.816786 | 4.620858e-52 | -8.615850e-47 |
| Msa0940910 | Msa1439250 | 0.864007 | 1.656489e-64 | -8.615850e-47 |
| Msa0940910 | Msa1445530 | 0.813411 | 2.594498e-51 | -8.615850e-47 |
| Msa0940910 | Msa1454500 | 0.805515 | 1.286449e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0940910 | MtrunA17_Chr6g0456901 | 97.414 | 232 | 6 | 0 | 1 | 232 | 1 | 232 | 5.33e-165 | 454 |
| Msa0940910 | MtrunA17_Chr1g0203371 | 47.085 | 223 | 115 | 2 | 5 | 227 | 6 | 225 | 1.89e-64 | 199 |
| Msa0940910 | MtrunA17_Chr5g0422371 | 46.226 | 212 | 109 | 3 | 16 | 223 | 18 | 228 | 1.49e-55 | 177 |
| Msa0940910 | MtrunA17_Chr1g0161921 | 37.313 | 201 | 121 | 1 | 20 | 220 | 21 | 216 | 2.31e-46 | 153 |
| Msa0940910 | MtrunA17_Chr1g0161941 | 34.673 | 199 | 126 | 1 | 19 | 217 | 14 | 208 | 3.02e-39 | 134 |
| Msa0940910 | MtrunA17_Chr8g0375991 | 35.385 | 195 | 120 | 3 | 19 | 213 | 14 | 202 | 3.99e-38 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0940910 | AT5G38630.1 | 69.196 | 224 | 69 | 0 | 1 | 224 | 1 | 224 | 2.34e-111 | 319 |
| Msa0940910 | AT4G25570.1 | 41.500 | 200 | 116 | 1 | 16 | 215 | 15 | 213 | 1.17e-54 | 175 |
| Msa0940910 | AT4G25570.2 | 41.709 | 199 | 115 | 1 | 17 | 215 | 57 | 254 | 4.11e-54 | 175 |
| Msa0940910 | AT1G26100.1 | 42.534 | 221 | 115 | 5 | 4 | 223 | 6 | 215 | 3.25e-47 | 156 |
| Msa0940910 | AT1G14730.1 | 34.466 | 206 | 128 | 2 | 19 | 223 | 25 | 224 | 1.93e-36 | 128 |
Find 57 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTGGATTTGCAACATTT+TGG | 0.259463 | 6_3:-14022216 | Msa0940910:CDS |
| TTCTGAGCTTAATTGGTCTC+TGG | 0.270642 | 6_3:-14022863 | Msa0940910:CDS |
| GCTCTCATTCTGAGCTTAAT+TGG | 0.281510 | 6_3:-14022870 | Msa0940910:CDS |
| TGTTTGTTTCTTGCATGTTT+GGG | 0.284878 | 6_3:-14021751 | Msa0940910:three_prime_UTR |
| TTGTTTGTTTCTTGCATGTT+TGG | 0.288149 | 6_3:-14021752 | Msa0940910:three_prime_UTR |
| ATTTCTACAGCCTGCATTCA+TGG | 0.301912 | 6_3:-14022803 | Msa0940910:CDS |
| ATATTCCAATGAAGCACTTT+TGG | 0.310108 | 6_3:-14022044 | Msa0940910:CDS |
| ATGCCATGGCATGTGTTCTT+TGG | 0.349931 | 6_3:-14022157 | Msa0940910:CDS |
| GTTGACCAAAAGTGCTTCAT+TGG | 0.353751 | 6_3:+14022039 | None:intergenic |
| GTTGTAAGATGTATTCGATT+AGG | 0.363614 | 6_3:-14021879 | Msa0940910:three_prime_UTR |
| TTAGGTGGCTTTGTTATTCT+CGG | 0.365202 | 6_3:-14021992 | Msa0940910:CDS |
| GAAGGGTGATTGAGGTATAA+AGG | 0.399582 | 6_3:+14025044 | None:intergenic |
| TACAGCCTGCATTCATGGTT+AGG | 0.404505 | 6_3:-14022798 | Msa0940910:CDS |
| CTCTCACTGTTGCGAAGATC+GGG | 0.412864 | 6_3:+14024933 | None:intergenic |
| AATAAAGCTGATGATATAAG+AGG | 0.418425 | 6_3:-14021950 | Msa0940910:CDS |
| CTACTATTTCTTGAGCCTCC+TGG | 0.421659 | 6_3:+14022190 | None:intergenic |
| AAAATACCTGAATGAAGAAT+AGG | 0.424840 | 6_3:+14022760 | None:intergenic |
| CATCCAGTGCTGATGGTGAT+TGG | 0.432858 | 6_3:-14023779 | Msa0940910:CDS |
| TTCGCAACAGTGAGAGGTAT+TGG | 0.436891 | 6_3:-14024926 | Msa0940910:CDS |
| ATATGACGTTGCCGGTTTGA+AGG | 0.453380 | 6_3:+14022071 | None:intergenic |
| ATTGGCCTTGTTCTGATCAA+TGG | 0.456315 | 6_3:-14023761 | Msa0940910:CDS |
| CCTCTCACTGTTGCGAAGAT+CGG | 0.456843 | 6_3:+14024932 | None:intergenic |
| ATATCGCGATATGACGTTGC+CGG | 0.458503 | 6_3:+14022063 | None:intergenic |
| TCTGAGCTTAATTGGTCTCT+GGG | 0.459830 | 6_3:-14022862 | Msa0940910:CDS |
| CTTGCGTACAGGACGGTATC+CGG | 0.466981 | 6_3:-14022939 | Msa0940910:CDS |
| TAATTGGTCTCTGGGCTGCT+TGG | 0.489448 | 6_3:-14022854 | Msa0940910:CDS |
| TCGCTACTCTTCTGTTAACA+TGG | 0.495998 | 6_3:-14024895 | Msa0940910:CDS |
| GCTATAGCCACAACTGCTAC+TGG | 0.500884 | 6_3:-14022115 | Msa0940910:CDS |
| CCTGAATGAAGAATAGGAAA+AGG | 0.505159 | 6_3:+14022766 | None:intergenic |
| AAGGCTACATTCCTTCAAAC+CGG | 0.515114 | 6_3:-14022082 | Msa0940910:CDS |
| GTGCAGGGATGCTTGCGTAC+AGG | 0.523806 | 6_3:-14022950 | Msa0940910:intron |
| AGGCCAATCACCATCAGCAC+TGG | 0.529993 | 6_3:+14023776 | None:intergenic |
| ACATGGGTTGTTCATTTCAG+AGG | 0.537822 | 6_3:-14024878 | Msa0940910:CDS |
| TAAAAGACCAGTAGCAGTTG+TGG | 0.540299 | 6_3:+14022108 | None:intergenic |
| ATCGGGAATTTGACTACTGG+TGG | 0.544162 | 6_3:+14024950 | None:intergenic |
| CGCTACTCTTCTGTTAACAT+GGG | 0.547073 | 6_3:-14024894 | Msa0940910:CDS |
| CAAGGCCTAACCATGAATGC+AGG | 0.550817 | 6_3:+14022793 | None:intergenic |
| TTGATGTTGAAGGGTGATTG+AGG | 0.551413 | 6_3:+14025036 | None:intergenic |
| TGGTATCTATATCTATGCAT+TGG | 0.564702 | 6_3:-14022137 | Msa0940910:CDS |
| TCATCAGCTTTATTATAAGT+CGG | 0.565682 | 6_3:+14021959 | None:intergenic |
| GATATAAGAGGAAATGAGTG+AGG | 0.565852 | 6_3:-14021938 | Msa0940910:exon |
| AAGATCGGGAATTTGACTAC+TGG | 0.568641 | 6_3:+14024947 | None:intergenic |
| GTTTGTTTCTTGCATGTTTG+GGG | 0.582352 | 6_3:-14021750 | Msa0940910:three_prime_UTR |
| CCGATCTTCGCAACAGTGAG+AGG | 0.584109 | 6_3:-14024932 | Msa0940910:CDS |
| TGGGTTGTTCATTTCAGAGG+AGG | 0.588663 | 6_3:-14024875 | Msa0940910:CDS |
| AATGAAGAATAGGAAAAGGC+AGG | 0.590163 | 6_3:+14022770 | None:intergenic |
| AGAATAGGAAAAGGCAGGCA+AGG | 0.599473 | 6_3:+14022775 | None:intergenic |
| TGGAAATTTCACAATGACAA+GGG | 0.615433 | 6_3:-14022834 | Msa0940910:CDS |
| GTAGAGTTGCGCTAATGCCA+TGG | 0.616539 | 6_3:-14022171 | Msa0940910:CDS |
| GTAGGTTCATCCAGTGCTGA+TGG | 0.623339 | 6_3:-14023786 | Msa0940910:intron |
| CTTCACCATTGATCAGAACA+AGG | 0.635114 | 6_3:+14023756 | None:intergenic |
| TTGGAAATTTCACAATGACA+AGG | 0.644036 | 6_3:-14022835 | Msa0940910:CDS |
| ATACCAAAGAACACATGCCA+TGG | 0.644899 | 6_3:+14022154 | None:intergenic |
| CTTGTTCTGATCAATGGTGA+AGG | 0.651060 | 6_3:-14023755 | Msa0940910:intron |
| ATATAAGAGGAAATGAGTGA+GGG | 0.651249 | 6_3:-14021937 | Msa0940910:exon |
| AAATATGAGAACATGAAGAA+CGG | 0.652032 | 6_3:-14021901 | Msa0940910:three_prime_UTR |
| AGGGATGCTTGCGTACAGGA+CGG | 0.686714 | 6_3:-14022946 | Msa0940910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTAATGTTTTTAATTTTT+TGG | - | chr6_3:14022088-14022107 | Msa0940910:CDS | 10.0% |
| !!! | TTTTTTGTTTAAATTTAGTT+TGG | - | chr6_3:14022587-14022606 | Msa0940910:intron | 10.0% |
| !!! | TTGTTATTATTCTTTGTTTT+AGG | - | chr6_3:14022035-14022054 | Msa0940910:CDS | 15.0% |
| !!! | TGTTATTATTCTTTGTTTTA+GGG | - | chr6_3:14022036-14022055 | Msa0940910:CDS | 15.0% |
| !!! | TTTTTTTTTTTCACTCTTTT+CGG | + | chr6_3:14023637-14023656 | None:intergenic | 15.0% |
| !! | AAAGAGTGAAAAAAAAAAAT+TGG | - | chr6_3:14023638-14023657 | Msa0940910:intron | 15.0% |
| !!! | CATTTTTCAGATAATTTATT+CGG | - | chr6_3:14024184-14024203 | Msa0940910:intron | 15.0% |
| !!! | AAAAATAGAAAGTACTAATT+TGG | + | chr6_3:14024420-14024439 | None:intergenic | 15.0% |
| !!! | ATTAGTACTTTCTATTTTTA+AGG | - | chr6_3:14024421-14024440 | Msa0940910:intron | 15.0% |
| !! | TATAAAGGAAAAAGAAAACT+TGG | + | chr6_3:14021731-14021750 | None:intergenic | 20.0% |
| !!! | TTTTAACTCTTTTTTTCATC+TGG | - | chr6_3:14021991-14022010 | Msa0940910:CDS | 20.0% |
| !!! | TTTAACTCTTTTTTTCATCT+GGG | - | chr6_3:14021992-14022011 | Msa0940910:CDS | 20.0% |
| !!! | TGTTTTTAATTTTTTGGTGT+TGG | - | chr6_3:14022094-14022113 | Msa0940910:CDS | 20.0% |
| !!! | TGTTAATTTTGTTTCAGTTT+TGG | - | chr6_3:14022161-14022180 | Msa0940910:CDS | 20.0% |
| !! | TTTATTAATCTTTGTAGCAT+TGG | - | chr6_3:14022247-14022266 | Msa0940910:intron | 20.0% |
| !!! | GAGTGTAAATTTTGATTTTT+AGG | - | chr6_3:14022489-14022508 | Msa0940910:intron | 20.0% |
| !! | GAAATATAGCGAAAATATAT+GGG | + | chr6_3:14023328-14023347 | None:intergenic | 20.0% |
| !! | TGAAATATAGCGAAAATATA+TGG | + | chr6_3:14023329-14023348 | None:intergenic | 20.0% |
| !!! | ATATTTTCGCTATATTTCAT+TGG | - | chr6_3:14023330-14023349 | Msa0940910:intron | 20.0% |
| !! | ACAAATAAATACTTGAAAAG+AGG | + | chr6_3:14023613-14023632 | None:intergenic | 20.0% |
| !!! | GAAACAAATGTTTTAAAAAC+TGG | + | chr6_3:14024372-14024391 | None:intergenic | 20.0% |
| !!! | AATGAGATTTTGATGTTGAA+GGG | + | chr6_3:14021763-14021782 | None:intergenic | 25.0% |
| !!! | TATTCTTTGTTTTAGGGTAA+TGG | - | chr6_3:14022042-14022061 | Msa0940910:CDS | 25.0% |
| !!! | ATTCTTTGTTTTAGGGTAAT+GGG | - | chr6_3:14022043-14022062 | Msa0940910:CDS | 25.0% |
| ! | TTGAATATGTGAGAATTTGA+AGG | - | chr6_3:14022119-14022138 | Msa0940910:CDS | 25.0% |
| ! | TTGAATGTAAACACATGTAT+CGG | + | chr6_3:14022308-14022327 | None:intergenic | 25.0% |
| ! | CATATTGAGACTAGAAATTA+TGG | + | chr6_3:14022539-14022558 | None:intergenic | 25.0% |
| ! | TGCTAAACTTATCGTAATTA+AGG | - | chr6_3:14022622-14022641 | Msa0940910:intron | 25.0% |
| !!! | TTTTGTTTAGCAATAAGAAG+TGG | - | chr6_3:14022752-14022771 | Msa0940910:intron | 25.0% |
| ! | AATAACAGTGATCAACAAAT+CGG | - | chr6_3:14023153-14023172 | Msa0940910:intron | 25.0% |
| ! | TTGCATTACATACAGATAAA+GGG | + | chr6_3:14023223-14023242 | None:intergenic | 25.0% |
| ! | TTCAGATTTCTCATAGTATT+TGG | + | chr6_3:14023246-14023265 | None:intergenic | 25.0% |
| ! | ATACTATGAGAAATCTGAAT+AGG | - | chr6_3:14023247-14023266 | Msa0940910:intron | 25.0% |
| ! | AATATATGGGAATTGACTAT+AGG | + | chr6_3:14023315-14023334 | None:intergenic | 25.0% |
| !!! | ACAAAACTAAAGAAAGTATC+TGG | - | chr6_3:14023520-14023539 | Msa0940910:intron | 25.0% |
| !! | ACAACAATTTTCACTCTTTT+CGG | + | chr6_3:14023716-14023735 | None:intergenic | 25.0% |
| !! | TCCTTTTACTATCTCTTAAT+TGG | - | chr6_3:14023754-14023773 | Msa0940910:intron | 25.0% |
| ! | ACCAATTAAGAGATAGTAAA+AGG | + | chr6_3:14023758-14023777 | None:intergenic | 25.0% |
| !!! | TGTTTTTTTTATCAATGTGC+AGG | - | chr6_3:14023821-14023840 | Msa0940910:intron | 25.0% |
| !!! | GTTTTTTTTATCAATGTGCA+GGG | - | chr6_3:14023822-14023841 | Msa0940910:intron | 25.0% |
| ! | AAAATACCTGAATGAAGAAT+AGG | + | chr6_3:14024030-14024049 | None:intergenic | 25.0% |
| !!! | TCGATCAATGTTTTAAAAAC+TGG | - | chr6_3:14024234-14024253 | Msa0940910:intron | 25.0% |
| !!! | CAATGTTTTAAAAACTGGAT+TGG | - | chr6_3:14024239-14024258 | Msa0940910:intron | 25.0% |
| !!! | ACTTTCTATTTTTAAGGATC+TGG | - | chr6_3:14024427-14024446 | Msa0940910:intron | 25.0% |
| !!! | TTTTTTCTCAAAGACTAGTT+TGG | - | chr6_3:14024462-14024481 | Msa0940910:intron | 25.0% |
| !!! | ATTTTAATTGTTGCTTTAGG+TGG | - | chr6_3:14024780-14024799 | Msa0940910:intron | 25.0% |
| !!! | TCATCAGCTTTATTATAAGT+CGG | + | chr6_3:14024831-14024850 | None:intergenic | 25.0% |
| ! | AATAAAGCTGATGATATAAG+AGG | - | chr6_3:14024837-14024856 | Msa0940910:CDS | 25.0% |
| ! | AAATATGAGAACATGAAGAA+CGG | - | chr6_3:14024886-14024905 | Msa0940910:CDS | 25.0% |
| !! | GAATGAGATTTTGATGTTGA+AGG | + | chr6_3:14021764-14021783 | None:intergenic | 30.0% |
| ! | TCAATTTTCTCTCTGTAGAA+TGG | - | chr6_3:14021809-14021828 | Msa0940910:three_prime_UTR | 30.0% |
| ATTTGAAGGCTTAGGATTAA+AGG | - | chr6_3:14022133-14022152 | Msa0940910:CDS | 30.0% | |
| TTTGAAGGCTTAGGATTAAA+GGG | - | chr6_3:14022134-14022153 | Msa0940910:CDS | 30.0% | |
| GATTTGAATTTCATCTCTTG+AGG | - | chr6_3:14022422-14022441 | Msa0940910:intron | 30.0% | |
| CACATGTTGTAGTATGTATT+TGG | - | chr6_3:14022462-14022481 | Msa0940910:intron | 30.0% | |
| GAGACTAGAAATTATGGTAA+AGG | + | chr6_3:14022533-14022552 | None:intergenic | 30.0% | |
| !!! | GCTTTAAAGTGTGAATTTTG+AGG | - | chr6_3:14022720-14022739 | Msa0940910:intron | 30.0% |
| CCATAAAAAAAATCTCTACG+AGG | + | chr6_3:14022881-14022900 | None:intergenic | 30.0% | |
| !!! | CCTCGTAGAGATTTTTTTTA+TGG | - | chr6_3:14022878-14022897 | Msa0940910:CDS | 30.0% |
| TAAACTCTTGTATTCCATGT+AGG | - | chr6_3:14022983-14023002 | Msa0940910:intron | 30.0% | |
| !! | TGCCTGTTTGAAACTTTTTA+TGG | - | chr6_3:14023099-14023118 | Msa0940910:intron | 30.0% |
| CACCATAAAAAGTTTCAAAC+AGG | + | chr6_3:14023104-14023123 | None:intergenic | 30.0% | |
| TTATGGTGATATTGCTATGA+AGG | - | chr6_3:14023116-14023135 | Msa0940910:intron | 30.0% | |
| TATGGTGATATTGCTATGAA+GGG | - | chr6_3:14023117-14023136 | Msa0940910:intron | 30.0% | |
| GTTGCATTACATACAGATAA+AGG | + | chr6_3:14023224-14023243 | None:intergenic | 30.0% | |
| ACTTTCAACTCTTGCATTTA+AGG | + | chr6_3:14023403-14023422 | None:intergenic | 30.0% | |
| ATAAAGACGAGACTCATAAA+TGG | + | chr6_3:14023493-14023512 | None:intergenic | 30.0% | |
| TTGTAGTGTTAGTACTAACT+CGG | - | chr6_3:14023793-14023812 | Msa0940910:intron | 30.0% | |
| !!! | TTTTCTGAAGCTTTTAGTTC+CGG | + | chr6_3:14023870-14023889 | None:intergenic | 30.0% |
| TTGGAAATTTCACAATGACA+AGG | - | chr6_3:14023952-14023971 | Msa0940910:intron | 30.0% | |
| TGGAAATTTCACAATGACAA+GGG | - | chr6_3:14023953-14023972 | Msa0940910:intron | 30.0% | |
| TGTTCAGGCATTTGAAAATT+TGG | + | chr6_3:14024159-14024178 | None:intergenic | 30.0% | |
| CTGAAAAATGACTAATGTTC+AGG | + | chr6_3:14024174-14024193 | None:intergenic | 30.0% | |
| TGGTATCTATATCTATGCAT+TGG | - | chr6_3:14024650-14024669 | Msa0940910:intron | 30.0% | |
| !! | ATATTCCAATGAAGCACTTT+TGG | - | chr6_3:14024743-14024762 | Msa0940910:intron | 30.0% |
| !!! | GGCATTTTAATTGTTGCTTT+AGG | - | chr6_3:14024777-14024796 | Msa0940910:intron | 30.0% |
| ATATAAGAGGAAATGAGTGA+GGG | - | chr6_3:14024850-14024869 | Msa0940910:CDS | 30.0% | |
| GTTGTAAGATGTATTCGATT+AGG | - | chr6_3:14024908-14024927 | Msa0940910:CDS | 30.0% | |
| ! | TTGTTTGTTTCTTGCATGTT+TGG | - | chr6_3:14025035-14025054 | Msa0940910:five_prime_UTR | 30.0% |
| ! | TGTTTGTTTCTTGCATGTTT+GGG | - | chr6_3:14025036-14025055 | Msa0940910:five_prime_UTR | 30.0% |
| ! | TTGAGACAGACTTGTATTTT+TGG | - | chr6_3:14025061-14025080 | Msa0940910:five_prime_UTR | 30.0% |
| ATGTGAGAATTTGAAGGCTT+AGG | - | chr6_3:14022125-14022144 | Msa0940910:CDS | 35.0% | |
| !! | TATTATCAGTGTCGACATGT+TGG | - | chr6_3:14022347-14022366 | Msa0940910:intron | 35.0% |
| ATTAAGGTCTTTGACCTTTG+AGG | - | chr6_3:14022638-14022657 | Msa0940910:intron | 35.0% | |
| TTAAGGTCTTTGACCTTTGA+GGG | - | chr6_3:14022639-14022658 | Msa0940910:intron | 35.0% | |
| !! | CTTTAAAGCATGTGAGACTA+CGG | + | chr6_3:14022709-14022728 | None:intergenic | 35.0% |
| ! | TGTTTGCTGATGATAGAAAG+CGG | - | chr6_3:14023179-14023198 | Msa0940910:intron | 35.0% |
| ! | TAGAAAGCGGCGATAATTTT+AGG | - | chr6_3:14023192-14023211 | Msa0940910:intron | 35.0% |
| ! | AGACTCTAAAGAACCATGAA+AGG | + | chr6_3:14023361-14023380 | None:intergenic | 35.0% |
| ACTCTTGCATTTAAGGAGAA+AGG | + | chr6_3:14023396-14023415 | None:intergenic | 35.0% | |
| !!! | CTTTTCGGAATTTGTTAGCA+TGG | + | chr6_3:14023701-14023720 | None:intergenic | 35.0% |
| AATGAAGAATAGGAAAAGGC+AGG | + | chr6_3:14024020-14024039 | None:intergenic | 35.0% | |
| CCTGAATGAAGAATAGGAAA+AGG | + | chr6_3:14024024-14024043 | None:intergenic | 35.0% | |
| ! | CCTTTTCCTATTCTTCATTC+AGG | - | chr6_3:14024021-14024040 | Msa0940910:intron | 35.0% |
| !! | TATTTTCTCGACGACTAGTT+TGG | + | chr6_3:14024088-14024107 | None:intergenic | 35.0% |
| !! | GAAAATACACAGGCCTTATT+TGG | - | chr6_3:14024101-14024120 | Msa0940910:intron | 35.0% |
| CATTTCTCAGAGACCAAATA+AGG | + | chr6_3:14024117-14024136 | None:intergenic | 35.0% | |
| GAGAAATGCAAAACGTCAAT+CGG | - | chr6_3:14024129-14024148 | Msa0940910:intron | 35.0% | |
| !! | TTTGCAACATTTTGGTATCC+AGG | - | chr6_3:14024579-14024598 | Msa0940910:intron | 35.0% |
| !!! | TGCTACTGGTCTTTTAGAAA+AGG | - | chr6_3:14024686-14024705 | Msa0940910:intron | 35.0% |
| !! | TTAGGTGGCTTTGTTATTCT+CGG | - | chr6_3:14024795-14024814 | Msa0940910:intron | 35.0% |
| GATATAAGAGGAAATGAGTG+AGG | - | chr6_3:14024849-14024868 | Msa0940910:CDS | 35.0% | |
| ! | GTTTGTTTCTTGCATGTTTG+GGG | - | chr6_3:14025037-14025056 | Msa0940910:five_prime_UTR | 35.0% |
| GAAGGGTGATTGAGGTATAA+AGG | + | chr6_3:14021746-14021765 | None:intergenic | 40.0% | |
| TTGATGTTGAAGGGTGATTG+AGG | + | chr6_3:14021754-14021773 | None:intergenic | 40.0% | |
| AAGATCGGGAATTTGACTAC+TGG | + | chr6_3:14021843-14021862 | None:intergenic | 40.0% | |
| TCGCTACTCTTCTGTTAACA+TGG | - | chr6_3:14021892-14021911 | Msa0940910:three_prime_UTR | 40.0% | |
| CGCTACTCTTCTGTTAACAT+GGG | - | chr6_3:14021893-14021912 | Msa0940910:three_prime_UTR | 40.0% | |
| ! | ACATGGGTTGTTCATTTCAG+AGG | - | chr6_3:14021909-14021928 | Msa0940910:three_prime_UTR | 40.0% |
| TAAGGTCTTTGACCTTTGAG+GGG | - | chr6_3:14022640-14022659 | Msa0940910:intron | 40.0% | |
| ! | TAAGAAGTGGTTTGCGCATT+AGG | - | chr6_3:14022765-14022784 | Msa0940910:intron | 40.0% |
| !! | ATTGGCCTTGTTCTGATCAA+TGG | - | chr6_3:14023026-14023045 | Msa0940910:intron | 40.0% |
| CTTCACCATTGATCAGAACA+AGG | + | chr6_3:14023034-14023053 | None:intergenic | 40.0% | |
| CTTGTTCTGATCAATGGTGA+AGG | - | chr6_3:14023032-14023051 | Msa0940910:intron | 40.0% | |
| !! | AAGCGGCGATAATTTTAGGA+TGG | - | chr6_3:14023196-14023215 | Msa0940910:intron | 40.0% |
| TTCATTGGTGAAGCCTTTCA+TGG | - | chr6_3:14023345-14023364 | Msa0940910:intron | 40.0% | |
| !! | GGTTCTTTAGAGTCTATGCT+TGG | - | chr6_3:14023366-14023385 | Msa0940910:intron | 40.0% |
| GAAAGAGATCGAAAACAAGG+CGG | + | chr6_3:14023591-14023610 | None:intergenic | 40.0% | |
| GAGGAAAGAGATCGAAAACA+AGG | + | chr6_3:14023594-14023613 | None:intergenic | 40.0% | |
| ! | ATTTGTTAGCATGGCGTAGT+TGG | + | chr6_3:14023692-14023711 | None:intergenic | 40.0% |
| GCTCTCATTCTGAGCTTAAT+TGG | - | chr6_3:14023917-14023936 | Msa0940910:intron | 40.0% | |
| ! | TTCTGAGCTTAATTGGTCTC+TGG | - | chr6_3:14023924-14023943 | Msa0940910:intron | 40.0% |
| ! | TCTGAGCTTAATTGGTCTCT+GGG | - | chr6_3:14023925-14023944 | Msa0940910:intron | 40.0% |
| ATTTCTACAGCCTGCATTCA+TGG | - | chr6_3:14023984-14024003 | Msa0940910:intron | 40.0% | |
| TAGTCGTCGAGAAAATACAC+AGG | - | chr6_3:14024091-14024110 | Msa0940910:intron | 40.0% | |
| !!! | TTCGGACATTTTAGTTCCTG+AGG | - | chr6_3:14024202-14024221 | Msa0940910:intron | 40.0% |
| TGATCGAAATAGTACACCTC+AGG | + | chr6_3:14024221-14024240 | None:intergenic | 40.0% | |
| ! | CTAATTGGTTCAACCAACTG+TGG | - | chr6_3:14024294-14024313 | Msa0940910:intron | 40.0% |
| GAACTAGATTGAACCACAGT+TGG | + | chr6_3:14024310-14024329 | None:intergenic | 40.0% | |
| AAAACTGGACCAGATCAACA+GGG | + | chr6_3:14024357-14024376 | None:intergenic | 40.0% | |
| AAAAACTGGACCAGATCAAC+AGG | + | chr6_3:14024358-14024377 | None:intergenic | 40.0% | |
| !! | GCAGAGAGCATTTAGATACA+TGG | + | chr6_3:14024536-14024555 | None:intergenic | 40.0% |
| ! | CTGCTGGATTTGCAACATTT+TGG | - | chr6_3:14024571-14024590 | Msa0940910:intron | 40.0% |
| ATACCAAAGAACACATGCCA+TGG | + | chr6_3:14024636-14024655 | None:intergenic | 40.0% | |
| TAAAAGACCAGTAGCAGTTG+TGG | + | chr6_3:14024682-14024701 | None:intergenic | 40.0% | |
| AAGGCTACATTCCTTCAAAC+CGG | - | chr6_3:14024705-14024724 | Msa0940910:intron | 40.0% | |
| !! | GTTGACCAAAAGTGCTTCAT+TGG | + | chr6_3:14024751-14024770 | None:intergenic | 40.0% |
| ATCGGGAATTTGACTACTGG+TGG | + | chr6_3:14021840-14021859 | None:intergenic | 45.0% | |
| ! | TTCGCAACAGTGAGAGGTAT+TGG | - | chr6_3:14021861-14021880 | Msa0940910:three_prime_UTR | 45.0% |
| TGGGTTGTTCATTTCAGAGG+AGG | - | chr6_3:14021912-14021931 | Msa0940910:three_prime_UTR | 45.0% | |
| TATCCCACACGTGTTAGTGT+CGG | - | chr6_3:14022279-14022298 | Msa0940910:intron | 45.0% | |
| TAACCGACACTAACACGTGT+GGG | + | chr6_3:14022285-14022304 | None:intergenic | 45.0% | |
| AGTTCACACGAACACGAAGT+TGG | - | chr6_3:14022855-14022874 | Msa0940910:CDS | 45.0% | |
| TACAGCCTGCATTCATGGTT+AGG | - | chr6_3:14023989-14024008 | Msa0940910:intron | 45.0% | |
| AGAATAGGAAAAGGCAGGCA+AGG | + | chr6_3:14024015-14024034 | None:intergenic | 45.0% | |
| AGATCGAACCAGTAAGACCT+CGG | - | chr6_3:14024262-14024281 | Msa0940910:intron | 45.0% | |
| CCAATTAGATCATGATCCCG+AGG | + | chr6_3:14024282-14024301 | None:intergenic | 45.0% | |
| CCTCGGGATCATGATCTAAT+TGG | - | chr6_3:14024279-14024298 | Msa0940910:intron | 45.0% | |
| ! | GAACTGGTCTGTTCATCTGT+TGG | + | chr6_3:14024335-14024354 | None:intergenic | 45.0% |
| ! | CTCTCTGCACTTTTGTCAGT+TGG | - | chr6_3:14024548-14024567 | Msa0940910:intron | 45.0% |
| !! | GCAACATTTTGGTATCCAGG+AGG | - | chr6_3:14024582-14024601 | Msa0940910:intron | 45.0% |
| ! | CTACTATTTCTTGAGCCTCC+TGG | + | chr6_3:14024600-14024619 | None:intergenic | 45.0% |
| ATGCCATGGCATGTGTTCTT+TGG | - | chr6_3:14024630-14024649 | Msa0940910:intron | 45.0% | |
| !! | ATATGACGTTGCCGGTTTGA+AGG | + | chr6_3:14024719-14024738 | None:intergenic | 45.0% |
| ATATCGCGATATGACGTTGC+CGG | + | chr6_3:14024727-14024746 | None:intergenic | 45.0% | |
| ! | GCACTTTTGGTCAACTGCTT+AGG | - | chr6_3:14024756-14024775 | Msa0940910:intron | 45.0% |
| CTCTCACTGTTGCGAAGATC+GGG | + | chr6_3:14021857-14021876 | None:intergenic | 50.0% | |
| CCTCTCACTGTTGCGAAGAT+CGG | + | chr6_3:14021858-14021877 | None:intergenic | 50.0% | |
| GTAACCGACACTAACACGTG+TGG | + | chr6_3:14022286-14022305 | None:intergenic | 50.0% | |
| ! | TATGACGTGCTCAGCTCTGA+AGG | - | chr6_3:14022377-14022396 | Msa0940910:intron | 50.0% |
| !! | ATGACGTGCTCAGCTCTGAA+GGG | - | chr6_3:14022378-14022397 | Msa0940910:intron | 50.0% |
| CCTAAGCCATGGAGATACCT+TGG | + | chr6_3:14022670-14022689 | None:intergenic | 50.0% | |
| ! | CCAAGGTATCTCCATGGCTT+AGG | - | chr6_3:14022667-14022686 | Msa0940910:intron | 50.0% |
| TCTCCATGGCTTAGGCCTAT+TGG | - | chr6_3:14022675-14022694 | Msa0940910:intron | 50.0% | |
| CTCCATGGCTTAGGCCTATT+GGG | - | chr6_3:14022676-14022695 | Msa0940910:intron | 50.0% | |
| ! | CAGCACTGGATGAACCTACA+TGG | + | chr6_3:14023000-14023019 | None:intergenic | 50.0% |
| ! | GTAGGTTCATCCAGTGCTGA+TGG | - | chr6_3:14023001-14023020 | Msa0940910:intron | 50.0% |
| !! | CATCCAGTGCTGATGGTGAT+TGG | - | chr6_3:14023008-14023027 | Msa0940910:intron | 50.0% |
| ! | TAGCATGGCGTAGTTGGTCT+TGG | + | chr6_3:14023686-14023705 | None:intergenic | 50.0% |
| ! | TAATTGGTCTCTGGGCTGCT+TGG | - | chr6_3:14023933-14023952 | Msa0940910:intron | 50.0% |
| CAAGGCCTAACCATGAATGC+AGG | + | chr6_3:14023997-14024016 | None:intergenic | 50.0% | |
| GATCGAACCAGTAAGACCTC+GGG | - | chr6_3:14024263-14024282 | Msa0940910:intron | 50.0% | |
| TCATGATCCCGAGGTCTTAC+TGG | + | chr6_3:14024273-14024292 | None:intergenic | 50.0% | |
| AGACCAGTTCCCTGTTGATC+TGG | - | chr6_3:14024345-14024364 | Msa0940910:intron | 50.0% | |
| ! | CACTTTTGTCAGTTGGCTGC+TGG | - | chr6_3:14024555-14024574 | Msa0940910:intron | 50.0% |
| GTAGAGTTGCGCTAATGCCA+TGG | - | chr6_3:14024616-14024635 | Msa0940910:intron | 50.0% | |
| GCTATAGCCACAACTGCTAC+TGG | - | chr6_3:14024672-14024691 | Msa0940910:intron | 50.0% | |
| CCGATCTTCGCAACAGTGAG+AGG | - | chr6_3:14021855-14021874 | Msa0940910:three_prime_UTR | 55.0% | |
| ! | TACCTTGGAGCACCCCTCAA+AGG | + | chr6_3:14022655-14022674 | None:intergenic | 55.0% |
| ! | GGTGCTCCAAGGTATCTCCA+TGG | - | chr6_3:14022661-14022680 | Msa0940910:intron | 55.0% |
| TGCCCAATAGGCCTAAGCCA+TGG | + | chr6_3:14022681-14022700 | None:intergenic | 55.0% | |
| ACTACGGCAACGTGCCCAAT+AGG | + | chr6_3:14022693-14022712 | None:intergenic | 55.0% | |
| AGGCCAATCACCATCAGCAC+TGG | + | chr6_3:14023014-14023033 | None:intergenic | 55.0% | |
| AGGGATGCTTGCGTACAGGA+CGG | - | chr6_3:14023841-14023860 | Msa0940910:intron | 55.0% | |
| CTTGCGTACAGGACGGTATC+CGG | - | chr6_3:14023848-14023867 | Msa0940910:intron | 55.0% | |
| GGACCAGATCAACAGGGAAC+TGG | + | chr6_3:14024351-14024370 | None:intergenic | 55.0% | |
| !! | GACCTTTGAGGGGTGCTCCA+AGG | - | chr6_3:14022650-14022669 | Msa0940910:intron | 60.0% |
| GTGCAGGGATGCTTGCGTAC+AGG | - | chr6_3:14023837-14023856 | Msa0940910:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 14021719 | 14025090 | 14021719 | ID=Msa0940910;Name=Msa0940910 |
| chr6_3 | mRNA | 14021719 | 14025090 | 14021719 | ID=Msa0940910-mRNA-1;Parent=Msa0940910;Name=Msa0940910-mRNA-1;_AED=0.02;_eAED=0.02;_QI=109|1|1|1|1|1|4|221|232 |
| chr6_3 | exon | 14021719 | 14022242 | 14021719 | ID=Msa0940910-mRNA-1:exon:4433;Parent=Msa0940910-mRNA-1 |
| chr6_3 | exon | 14022767 | 14022966 | 14022767 | ID=Msa0940910-mRNA-1:exon:4432;Parent=Msa0940910-mRNA-1 |
| chr6_3 | exon | 14023756 | 14023804 | 14023756 | ID=Msa0940910-mRNA-1:exon:4431;Parent=Msa0940910-mRNA-1 |
| chr6_3 | exon | 14024835 | 14025090 | 14024835 | ID=Msa0940910-mRNA-1:exon:4430;Parent=Msa0940910-mRNA-1 |
| chr6_3 | five_prime_UTR | 14024982 | 14025090 | 14024982 | ID=Msa0940910-mRNA-1:five_prime_utr;Parent=Msa0940910-mRNA-1 |
| chr6_3 | CDS | 14024835 | 14024981 | 14024835 | ID=Msa0940910-mRNA-1:cds;Parent=Msa0940910-mRNA-1 |
| chr6_3 | CDS | 14023756 | 14023804 | 14023756 | ID=Msa0940910-mRNA-1:cds;Parent=Msa0940910-mRNA-1 |
| chr6_3 | CDS | 14022767 | 14022966 | 14022767 | ID=Msa0940910-mRNA-1:cds;Parent=Msa0940910-mRNA-1 |
| chr6_3 | CDS | 14021940 | 14022242 | 14021940 | ID=Msa0940910-mRNA-1:cds;Parent=Msa0940910-mRNA-1 |
| chr6_3 | three_prime_UTR | 14021719 | 14021939 | 14021719 | ID=Msa0940910-mRNA-1:three_prime_utr;Parent=Msa0940910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
