Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190310 | sp|H1A988|C7254_GLYUR | 62.334 | 377 | 131 | 5 | 5 | 370 | 6 | 382 | 4.77e-171 | 490 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190310 | A0A1S2YWK3 | 75.726 | 379 | 83 | 2 | 1 | 370 | 1 | 379 | 0.0 | 603 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0624230 | Msa1190310 | 0.873229 | 1.728259e-67 | -8.615850e-47 |
| Msa0624250 | Msa1190310 | 0.884179 | 2.392508e-71 | -8.615850e-47 |
| Msa0624350 | Msa1190310 | 0.870019 | 2.001952e-66 | -8.615850e-47 |
| Msa1088710 | Msa1190310 | 0.806388 | 8.428790e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190310 | MtrunA17_Chr8g0354571 | 61.186 | 371 | 130 | 3 | 11 | 370 | 16 | 383 | 1.15e-162 | 466 |
| Msa1190310 | MtrunA17_Chr8g0354511 | 60.270 | 370 | 133 | 3 | 11 | 369 | 16 | 382 | 2.35e-160 | 460 |
| Msa1190310 | MtrunA17_Chr8g0354531 | 61.559 | 372 | 128 | 5 | 10 | 370 | 137 | 504 | 1.38e-159 | 462 |
| Msa1190310 | MtrunA17_Chr2g0313781 | 51.421 | 387 | 168 | 3 | 4 | 370 | 1 | 387 | 3.19e-138 | 404 |
| Msa1190310 | MtrunA17_Chr2g0313821 | 52.000 | 375 | 172 | 2 | 4 | 370 | 1 | 375 | 1.34e-137 | 402 |
| Msa1190310 | MtrunA17_Chr2g0313801 | 51.733 | 375 | 173 | 2 | 4 | 370 | 1 | 375 | 1.36e-136 | 399 |
| Msa1190310 | MtrunA17_Chr2g0313791 | 52.989 | 368 | 160 | 3 | 11 | 370 | 8 | 370 | 1.37e-135 | 396 |
| Msa1190310 | MtrunA17_Chr2g0313831 | 51.323 | 378 | 173 | 3 | 1 | 370 | 1 | 375 | 1.18e-134 | 394 |
| Msa1190310 | MtrunA17_Chr2g0313771 | 50.923 | 379 | 169 | 7 | 5 | 370 | 8 | 382 | 1.70e-129 | 381 |
| Msa1190310 | MtrunA17_Chr2g0313751 | 50.538 | 372 | 172 | 5 | 10 | 370 | 32 | 402 | 7.15e-129 | 380 |
| Msa1190310 | MtrunA17_Chr2g0313811 | 53.784 | 370 | 151 | 3 | 21 | 370 | 18 | 387 | 1.49e-127 | 376 |
| Msa1190310 | MtrunA17_Chr2g0288661 | 48.413 | 378 | 186 | 3 | 1 | 370 | 1 | 377 | 4.16e-127 | 375 |
| Msa1190310 | MtrunA17_Chr2g0307301 | 49.162 | 358 | 173 | 3 | 21 | 370 | 21 | 377 | 3.12e-125 | 370 |
| Msa1190310 | MtrunA17_Chr2g0307291 | 48.000 | 375 | 181 | 4 | 9 | 370 | 4 | 377 | 3.10e-123 | 365 |
| Msa1190310 | MtrunA17_Chr5g0446131 | 48.641 | 368 | 180 | 3 | 11 | 370 | 7 | 373 | 5.26e-123 | 364 |
| Msa1190310 | MtrunA17_Chr2g0313761 | 50.742 | 337 | 157 | 3 | 42 | 370 | 35 | 370 | 1.76e-116 | 347 |
| Msa1190310 | MtrunA17_Chr8g0354561 | 52.905 | 327 | 120 | 4 | 11 | 326 | 98 | 401 | 7.18e-115 | 340 |
| Msa1190310 | MtrunA17_Chr4g0014051 | 44.562 | 377 | 197 | 5 | 4 | 370 | 13 | 387 | 1.85e-102 | 312 |
| Msa1190310 | MtrunA17_Chr4g0063221 | 35.854 | 357 | 204 | 9 | 30 | 369 | 29 | 377 | 6.07e-58 | 196 |
| Msa1190310 | MtrunA17_Chr1g0193811 | 33.333 | 354 | 218 | 8 | 30 | 370 | 27 | 375 | 5.67e-56 | 191 |
| Msa1190310 | MtrunA17_Chr7g0262111 | 34.540 | 359 | 211 | 10 | 25 | 370 | 21 | 368 | 2.23e-50 | 176 |
| Msa1190310 | MtrunA17_Chr1g0154731 | 30.878 | 353 | 224 | 8 | 29 | 370 | 23 | 366 | 4.79e-47 | 167 |
| Msa1190310 | MtrunA17_Chr6g0457421 | 27.513 | 378 | 243 | 8 | 11 | 370 | 6 | 370 | 8.03e-45 | 161 |
| Msa1190310 | MtrunA17_Chr7g0235261 | 29.863 | 365 | 222 | 10 | 31 | 369 | 12 | 368 | 2.47e-44 | 159 |
| Msa1190310 | MtrunA17_Chr4g0004601 | 29.730 | 370 | 221 | 11 | 27 | 369 | 32 | 389 | 2.30e-42 | 155 |
| Msa1190310 | MtrunA17_Chr7g0215181 | 27.835 | 388 | 245 | 11 | 1 | 370 | 2 | 372 | 3.64e-42 | 154 |
| Msa1190310 | MtrunA17_Chr8g0336361 | 30.278 | 360 | 229 | 9 | 11 | 356 | 15 | 366 | 4.20e-41 | 152 |
| Msa1190310 | MtrunA17_Chr1g0203141 | 30.508 | 354 | 225 | 10 | 29 | 369 | 28 | 373 | 2.12e-40 | 149 |
| Msa1190310 | MtrunA17_Chr6g0472221 | 30.079 | 379 | 239 | 10 | 11 | 369 | 12 | 384 | 8.06e-35 | 134 |
| Msa1190310 | MtrunA17_Chr1g0203151 | 29.714 | 350 | 229 | 9 | 29 | 369 | 28 | 369 | 1.65e-34 | 133 |
| Msa1190310 | MtrunA17_Chr3g0128461 | 25.464 | 377 | 250 | 10 | 14 | 369 | 16 | 382 | 7.65e-34 | 131 |
| Msa1190310 | MtrunA17_Chr6g0479681 | 29.060 | 351 | 231 | 9 | 29 | 369 | 29 | 371 | 3.74e-33 | 129 |
| Msa1190310 | MtrunA17_Chr8g0364081 | 29.306 | 389 | 236 | 16 | 11 | 370 | 22 | 400 | 2.63e-32 | 127 |
| Msa1190310 | MtrunA17_Chr8g0362731 | 30.350 | 257 | 163 | 8 | 121 | 369 | 18 | 266 | 2.96e-31 | 122 |
| Msa1190310 | MtrunA17_Chr6g0472161 | 27.401 | 354 | 237 | 9 | 29 | 369 | 24 | 370 | 2.98e-30 | 119 |
| Msa1190310 | MtrunA17_Chr2g0307311 | 43.220 | 118 | 62 | 2 | 41 | 154 | 6 | 122 | 4.53e-27 | 104 |
| Msa1190310 | MtrunA17_Chr2g0308651 | 29.508 | 244 | 160 | 5 | 137 | 368 | 26 | 269 | 1.21e-25 | 107 |
| Msa1190310 | MtrunA17_Chr1g0182871 | 28.800 | 250 | 141 | 6 | 137 | 369 | 27 | 256 | 2.16e-22 | 95.1 |
| Msa1190310 | MtrunA17_Chr2g0307321 | 41.935 | 93 | 50 | 1 | 165 | 253 | 1 | 93 | 4.91e-18 | 79.0 |
| Msa1190310 | MtrunA17_Chr8g0354541 | 83.784 | 37 | 6 | 0 | 334 | 370 | 1 | 37 | 2.25e-14 | 70.9 |
| Msa1190310 | MtrunA17_Chr5g0396521 | 23.051 | 295 | 186 | 7 | 104 | 369 | 117 | 399 | 4.65e-13 | 70.5 |
| Msa1190310 | MtrunA17_Chr5g0445531 | 23.871 | 310 | 198 | 11 | 81 | 368 | 58 | 351 | 1.58e-12 | 68.6 |
| Msa1190310 | MtrunA17_Chr0c19g0493771 | 24.342 | 304 | 181 | 13 | 90 | 369 | 226 | 504 | 7.01e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190310 | AT3G14690.1 | 45.380 | 368 | 186 | 4 | 12 | 370 | 10 | 371 | 5.04e-115 | 344 |
| Msa1190310 | AT3G14690.2 | 45.380 | 368 | 186 | 4 | 12 | 370 | 45 | 406 | 2.07e-114 | 343 |
| Msa1190310 | AT3G14660.3 | 47.025 | 353 | 172 | 5 | 27 | 370 | 25 | 371 | 1.72e-112 | 333 |
| Msa1190310 | AT3G14660.1 | 46.761 | 355 | 174 | 5 | 25 | 370 | 23 | 371 | 8.23e-111 | 333 |
| Msa1190310 | AT3G14650.1 | 45.634 | 355 | 178 | 4 | 25 | 370 | 23 | 371 | 2.99e-109 | 329 |
| Msa1190310 | AT3G14610.1 | 45.125 | 359 | 181 | 5 | 22 | 370 | 19 | 371 | 1.15e-108 | 328 |
| Msa1190310 | AT3G14680.1 | 44.789 | 355 | 181 | 4 | 25 | 370 | 23 | 371 | 2.14e-106 | 322 |
| Msa1190310 | AT3G14620.1 | 44.972 | 358 | 178 | 5 | 22 | 369 | 24 | 372 | 2.14e-106 | 322 |
| Msa1190310 | AT3G14640.1 | 44.818 | 357 | 180 | 5 | 25 | 370 | 23 | 373 | 1.99e-105 | 320 |
| Msa1190310 | AT3G14640.2 | 44.818 | 357 | 180 | 5 | 25 | 370 | 45 | 395 | 5.74e-105 | 319 |
| Msa1190310 | AT3G14630.1 | 43.935 | 371 | 190 | 6 | 11 | 370 | 4 | 367 | 1.81e-102 | 312 |
| Msa1190310 | AT3G14630.2 | 43.935 | 371 | 190 | 6 | 11 | 370 | 59 | 422 | 5.55e-102 | 312 |
| Msa1190310 | AT2G26710.1 | 34.667 | 375 | 213 | 9 | 11 | 369 | 15 | 373 | 8.43e-69 | 225 |
| Msa1190310 | AT1G17060.1 | 35.125 | 279 | 173 | 3 | 12 | 282 | 12 | 290 | 1.46e-59 | 195 |
| Msa1190310 | AT3G14660.2 | 46.729 | 214 | 103 | 4 | 162 | 370 | 18 | 225 | 1.23e-58 | 194 |
| Msa1190310 | AT2G46960.2 | 32.967 | 364 | 218 | 10 | 24 | 370 | 21 | 375 | 7.90e-56 | 191 |
| Msa1190310 | AT4G27710.1 | 33.613 | 357 | 212 | 9 | 30 | 370 | 29 | 376 | 1.62e-53 | 185 |
| Msa1190310 | AT2G46950.2 | 33.333 | 354 | 209 | 11 | 33 | 370 | 87 | 429 | 4.50e-53 | 182 |
| Msa1190310 | AT4G27710.2 | 33.333 | 354 | 206 | 10 | 30 | 366 | 29 | 369 | 2.00e-52 | 178 |
| Msa1190310 | AT2G46950.1 | 33.333 | 354 | 209 | 11 | 33 | 370 | 87 | 429 | 8.97e-52 | 181 |
| Msa1190310 | AT1G75130.1 | 29.577 | 355 | 227 | 7 | 28 | 369 | 21 | 365 | 2.49e-47 | 168 |
| Msa1190310 | AT5G24910.2 | 29.558 | 362 | 219 | 11 | 36 | 369 | 37 | 390 | 7.96e-42 | 151 |
| Msa1190310 | AT5G24910.1 | 29.558 | 362 | 219 | 11 | 36 | 369 | 37 | 390 | 7.77e-41 | 151 |
| Msa1190310 | AT2G46960.1 | 34.156 | 243 | 142 | 6 | 137 | 370 | 26 | 259 | 1.02e-40 | 148 |
| Msa1190310 | AT5G52400.1 | 29.668 | 391 | 239 | 12 | 1 | 369 | 1 | 377 | 1.41e-39 | 147 |
| Msa1190310 | AT5G24900.1 | 26.611 | 357 | 231 | 11 | 36 | 369 | 37 | 385 | 5.83e-34 | 132 |
| Msa1190310 | AT5G38450.2 | 27.493 | 371 | 253 | 9 | 11 | 368 | 9 | 376 | 6.01e-33 | 127 |
| Msa1190310 | AT5G38450.1 | 27.493 | 371 | 253 | 9 | 11 | 368 | 9 | 376 | 5.23e-32 | 126 |
| Msa1190310 | AT1G67110.2 | 25.269 | 372 | 255 | 6 | 10 | 368 | 9 | 370 | 2.14e-30 | 120 |
| Msa1190310 | AT1G67110.1 | 25.269 | 372 | 255 | 6 | 10 | 368 | 9 | 370 | 1.09e-29 | 119 |
| Msa1190310 | AT5G24900.2 | 28.455 | 246 | 156 | 7 | 137 | 369 | 30 | 268 | 2.76e-27 | 112 |
| Msa1190310 | AT4G15110.1 | 24.068 | 295 | 184 | 7 | 104 | 369 | 124 | 407 | 4.50e-12 | 67.8 |
Find 79 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCCATCATGATTTGGATTT+TGG | 0.086543 | 8_1:+33191263 | None:intergenic |
| TAATTGCTATTATTCCTTTA+TGG | 0.092637 | 8_1:-33193534 | Msa1190310:CDS |
| CTTGCACGTTCTTGCCATTC+AGG | 0.181436 | 8_1:+33191313 | None:intergenic |
| AACACTTGTTTGATTTGTTC+AGG | 0.218844 | 8_1:+33192205 | None:intergenic |
| AATTGCTATTATTCCTTTAT+GGG | 0.243184 | 8_1:-33193533 | Msa1190310:CDS |
| CCACTGCATCTTTGTTAGTT+TGG | 0.254225 | 8_1:-33191360 | Msa1190310:CDS |
| TAAAGGAATAATAGCAATTA+TGG | 0.263666 | 8_1:+33193537 | None:intergenic |
| CACTTTCACCTGCTACCTTC+TGG | 0.273707 | 8_1:-33193570 | Msa1190310:CDS |
| TGATTTATTAGGCTTACTTA+TGG | 0.276821 | 8_1:-33191491 | Msa1190310:CDS |
| GCCATCAATGATGATTTATT+AGG | 0.288793 | 8_1:-33191502 | Msa1190310:CDS |
| GGTATCAAATGGTTTGGATT+TGG | 0.312604 | 8_1:+33193387 | None:intergenic |
| AGTTTGGACAATGGTGTTAT+TGG | 0.316922 | 8_1:-33191344 | Msa1190310:CDS |
| TGACTTAACCCATCATGATT+TGG | 0.331413 | 8_1:+33191256 | None:intergenic |
| GATTTCCCTCATCCTCTTGT+TGG | 0.346905 | 8_1:+33191594 | None:intergenic |
| ATTTGATCTTATAAGGTTGC+AGG | 0.349582 | 8_1:-33191783 | Msa1190310:CDS |
| ACCACAAGGAATTCAGCTTC+TGG | 0.357033 | 8_1:+33193506 | None:intergenic |
| TTTGAGTTGAACAACTTGTA+TGG | 0.373578 | 8_1:+33193430 | None:intergenic |
| GCCTAATAAATCATCATTGA+TGG | 0.373911 | 8_1:+33191501 | None:intergenic |
| TGTTTGTCTTACCATATCAT+TGG | 0.375174 | 8_1:+33191734 | None:intergenic |
| GTTGGAGGTATCAAATGGTT+TGG | 0.384202 | 8_1:+33193381 | None:intergenic |
| GGGTCCGCGATGATCACTTT+TGG | 0.384929 | 8_1:+33192226 | None:intergenic |
| CACCAAACTGTCCGAAAATA+CGG | 0.402573 | 8_1:-33193328 | Msa1190310:intron |
| TGCAAGCAATTCTACATTGC+AGG | 0.404399 | 8_1:-33191391 | Msa1190310:CDS |
| CGTTGGATTAGTAAGTTATG+AGG | 0.413311 | 8_1:-33192125 | Msa1190310:CDS |
| CTAAGAGCACAAGGTCTTCA+AGG | 0.414544 | 8_1:-33193457 | Msa1190310:CDS |
| TCCATTTGCTAATCATATCA+TGG | 0.418520 | 8_1:+33191927 | None:intergenic |
| ATACACGCAGTCCAATGATA+TGG | 0.421677 | 8_1:-33191745 | Msa1190310:intron |
| TGCGTGTATTAAATAGAATA+TGG | 0.423913 | 8_1:+33191759 | None:intergenic |
| GGACAATGGTGTTATTGGCT+AGG | 0.425719 | 8_1:-33191339 | Msa1190310:CDS |
| GCGATTTCTAGAACAGCATT+TGG | 0.431431 | 8_1:-33191833 | Msa1190310:CDS |
| GAGATTTATGATTTAGTCGA+GGG | 0.436844 | 8_1:-33191565 | Msa1190310:CDS |
| CCTTTCATTCAAAACTTGAC+TGG | 0.439251 | 8_1:-33191860 | Msa1190310:CDS |
| AATGGAATCGAACTTTGGTT+TGG | 0.442194 | 8_1:+33192162 | None:intergenic |
| AGCTTCTGGAAAGCCCATAA+AGG | 0.443503 | 8_1:+33193520 | None:intergenic |
| ATTGCTAAGTGTTTGTTCGT+TGG | 0.444747 | 8_1:-33192142 | Msa1190310:CDS |
| GTTCAACTCAAAGTTGAAGA+TGG | 0.446231 | 8_1:-33193419 | Msa1190310:CDS |
| ATCCTCTTGTTGGAACTTGT+AGG | 0.447907 | 8_1:+33191604 | None:intergenic |
| AATTTATCAATGTGAAATGC+AGG | 0.455594 | 8_1:+33192067 | None:intergenic |
| GATGGCTTCTCCATTGTCCA+TGG | 0.458759 | 8_1:+33191519 | None:intergenic |
| GTGGTTGAGACCAAAGAGAT+TGG | 0.463375 | 8_1:-33193488 | Msa1190310:CDS |
| ACACTTGTTTGATTTGTTCA+GGG | 0.486748 | 8_1:+33192206 | None:intergenic |
| AACCAAAATCCAAATCATGA+TGG | 0.488741 | 8_1:-33191265 | Msa1190310:CDS |
| TTTGGCAGCAGCTATGTAGC+AGG | 0.491976 | 8_1:-33191815 | Msa1190310:CDS |
| TTAGCAATGGAATCGAACTT+TGG | 0.494174 | 8_1:+33192157 | None:intergenic |
| TATTGGCTAGGTTTCCTGAA+TGG | 0.499274 | 8_1:-33191327 | Msa1190310:CDS |
| ACATCGTTGGAGGTATCAAA+TGG | 0.514681 | 8_1:+33193376 | None:intergenic |
| GCCATGATATGATTAGCAAA+TGG | 0.516109 | 8_1:-33191928 | Msa1190310:CDS |
| GTAAGAATCCAGAAGGTAGC+AGG | 0.519867 | 8_1:+33193562 | None:intergenic |
| CAAGTTCCAACAAGAGGATG+AGG | 0.523830 | 8_1:-33191600 | Msa1190310:CDS |
| AAGTTATGAGGGTGACGAAT+GGG | 0.526252 | 8_1:-33192113 | Msa1190310:CDS |
| GTTGGATTAGTAAGTTATGA+GGG | 0.532684 | 8_1:-33192124 | Msa1190310:CDS |
| ATTTATCAATGTGAAATGCA+GGG | 0.533762 | 8_1:+33192068 | None:intergenic |
| GATCTGTGGCGCAACATCGT+TGG | 0.535279 | 8_1:+33193363 | None:intergenic |
| CATGAAAAGAGTAAGACAGC+TGG | 0.540594 | 8_1:-33191442 | Msa1190310:CDS |
| AGAGATTTATGATTTAGTCG+AGG | 0.542148 | 8_1:-33191566 | Msa1190310:CDS |
| ACCAAAATCCAAATCATGAT+GGG | 0.542219 | 8_1:-33191264 | Msa1190310:CDS |
| TCCAGAAGCTGAATTCCTTG+TGG | 0.542304 | 8_1:-33193507 | Msa1190310:CDS |
| TCAAATAAGCTTGAAACTCA+AGG | 0.545756 | 8_1:-33191466 | Msa1190310:CDS |
| TACCTACAAGTTCCAACAAG+AGG | 0.546932 | 8_1:-33191606 | Msa1190310:CDS |
| TTTGATCTTATAAGGTTGCA+GGG | 0.550447 | 8_1:-33191782 | Msa1190310:CDS |
| CGAGAGAAAGCCATGGACAA+TGG | 0.556873 | 8_1:-33191529 | Msa1190310:CDS |
| CTGTGGCGCAACATCGTTGG+AGG | 0.565671 | 8_1:+33193366 | None:intergenic |
| TTATTTACAGAATATGCTAC+CGG | 0.570816 | 8_1:-33191966 | Msa1190310:intron |
| ATCTTTGTTAGTTTGGACAA+TGG | 0.573101 | 8_1:-33191353 | Msa1190310:CDS |
| AACGAACAAACACTTAGCAA+TGG | 0.579121 | 8_1:+33192144 | None:intergenic |
| CTGAATGGCAAGAACGTGCA+AGG | 0.583115 | 8_1:-33191312 | Msa1190310:CDS |
| TGATATGATTAGCAAATGGA+AGG | 0.592903 | 8_1:-33191924 | Msa1190310:CDS |
| CCAAACTAACAAAGATGCAG+TGG | 0.595400 | 8_1:+33191360 | None:intergenic |
| TAAGTTATGAGGGTGACGAA+TGG | 0.597722 | 8_1:-33192114 | Msa1190310:CDS |
| TGGCTGCTTTGAATAAATGC+CGG | 0.607297 | 8_1:+33191947 | None:intergenic |
| AATCATGTGAGATTGATGTC+CGG | 0.615391 | 8_1:-33191883 | Msa1190310:CDS |
| TATGGCTGTAAGAATCCAGA+AGG | 0.633724 | 8_1:+33193555 | None:intergenic |
| TTGGCAGCAGCTATGTAGCA+GGG | 0.636138 | 8_1:-33191814 | Msa1190310:CDS |
| AAGTTCCAACAAGAGGATGA+GGG | 0.636816 | 8_1:-33191599 | Msa1190310:CDS |
| GAAAAGCTTCTAAGAGCACA+AGG | 0.638368 | 8_1:-33193466 | Msa1190310:CDS |
| TAAAATACGAGAGAAAGCCA+TGG | 0.657399 | 8_1:-33191536 | Msa1190310:CDS |
| TCTCTTTGGTCTCAACCACA+AGG | 0.666477 | 8_1:+33193492 | None:intergenic |
| TGTACGAATGAAAAGATCTG+TGG | 0.746082 | 8_1:+33193349 | None:intergenic |
| AATACCAAAAGTGATCATCG+CGG | 0.799523 | 8_1:-33192230 | Msa1190310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACATATTTTTTTTTTTGA+AGG | + | chr8_1:33191650-33191669 | None:intergenic | 10.0% |
| !!! | AAACATATTTTTTTTTTTGA+AGG | + | chr8_1:33191650-33191669 | None:intergenic | 10.0% |
| !!! | ATAAATATATACCGTATTTT+CGG | + | chr8_1:33191509-33191528 | None:intergenic | 15.0% |
| !! | AAAATACGGTATATATTTAT+AGG | - | chr8_1:33191509-33191528 | Msa1190310:CDS | 15.0% |
| !!! | ATGTTAACTTTTTTGTTTTT+TGG | - | chr8_1:33191599-33191618 | Msa1190310:CDS | 15.0% |
| !!! | TGTTAACTTTTTTGTTTTTT+GGG | - | chr8_1:33191600-33191619 | Msa1190310:CDS | 15.0% |
| !!! | TAAACAAATATTTTTACAGA+AGG | + | chr8_1:33191702-33191721 | None:intergenic | 15.0% |
| !!! | ATTTGAAGATTTTTTGATTT+TGG | - | chr8_1:33191737-33191756 | Msa1190310:intron | 15.0% |
| !!! | AATTTGAAATTTTTTGGTTT+TGG | + | chr8_1:33191909-33191928 | None:intergenic | 15.0% |
| !!! | ATCTAAACAATTTTTTTTAC+AGG | - | chr8_1:33191940-33191959 | Msa1190310:CDS | 15.0% |
| !!! | TCTAAACAATTTTTTTTACA+GGG | - | chr8_1:33191941-33191960 | Msa1190310:CDS | 15.0% |
| !! | TTTGCTTATAAAAAAACTAT+GGG | + | chr8_1:33192010-33192029 | None:intergenic | 15.0% |
| !! | ATTTGCTTATAAAAAAACTA+TGG | + | chr8_1:33192011-33192030 | None:intergenic | 15.0% |
| !!! | TCACATAAATTTTATAGAAT+TGG | + | chr8_1:33192204-33192223 | None:intergenic | 15.0% |
| !! | CAAAAATATTTGATCTTATA+AGG | - | chr8_1:33193033-33193052 | Msa1190310:intron | 15.0% |
| !!! | ATAAATATATACCGTATTTT+CGG | + | chr8_1:33191509-33191528 | None:intergenic | 15.0% |
| !! | AAAATACGGTATATATTTAT+AGG | - | chr8_1:33191509-33191528 | Msa1190310:CDS | 15.0% |
| !!! | ATGTTAACTTTTTTGTTTTT+TGG | - | chr8_1:33191599-33191618 | Msa1190310:CDS | 15.0% |
| !!! | TGTTAACTTTTTTGTTTTTT+GGG | - | chr8_1:33191600-33191619 | Msa1190310:CDS | 15.0% |
| !!! | TAAACAAATATTTTTACAGA+AGG | + | chr8_1:33191702-33191721 | None:intergenic | 15.0% |
| !!! | ATTTGAAGATTTTTTGATTT+TGG | - | chr8_1:33191737-33191756 | Msa1190310:intron | 15.0% |
| !!! | AATTTGAAATTTTTTGGTTT+TGG | + | chr8_1:33191909-33191928 | None:intergenic | 15.0% |
| !!! | ATCTAAACAATTTTTTTTAC+AGG | - | chr8_1:33191940-33191959 | Msa1190310:CDS | 15.0% |
| !!! | TCTAAACAATTTTTTTTACA+GGG | - | chr8_1:33191941-33191960 | Msa1190310:CDS | 15.0% |
| !! | TTTGCTTATAAAAAAACTAT+GGG | + | chr8_1:33192010-33192029 | None:intergenic | 15.0% |
| !! | ATTTGCTTATAAAAAAACTA+TGG | + | chr8_1:33192011-33192030 | None:intergenic | 15.0% |
| !!! | TCACATAAATTTTATAGAAT+TGG | + | chr8_1:33192204-33192223 | None:intergenic | 15.0% |
| !! | CAAAAATATTTGATCTTATA+AGG | - | chr8_1:33193033-33193052 | Msa1190310:intron | 15.0% |
| !! | TAAAGGAATAATAGCAATTA+TGG | + | chr8_1:33191289-33191308 | None:intergenic | 20.0% |
| !!! | TAATTGCTATTATTCCTTTA+TGG | - | chr8_1:33191289-33191308 | Msa1190310:CDS | 20.0% |
| !!! | AATTGCTATTATTCCTTTAT+GGG | - | chr8_1:33191290-33191309 | Msa1190310:CDS | 20.0% |
| !! | AAAATATTGTCTTCAAGTAA+AGG | + | chr8_1:33191561-33191580 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGAAGGATTACAA+GGG | + | chr8_1:33191640-33191659 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGAAGGATTACA+AGG | + | chr8_1:33191641-33191660 | None:intergenic | 20.0% |
| !! | CAAAAAATCTTCAAATTACA+GGG | + | chr8_1:33191733-33191752 | None:intergenic | 20.0% |
| !! | TCAAAAAATCTTCAAATTAC+AGG | + | chr8_1:33191734-33191753 | None:intergenic | 20.0% |
| !! | AAACCGAAATATTAATGATA+TGG | + | chr8_1:33191840-33191859 | None:intergenic | 20.0% |
| !!! | CCATGTAATTTGAAATTTTT+TGG | + | chr8_1:33191915-33191934 | None:intergenic | 20.0% |
| !! | CCAAAAAATTTCAAATTACA+TGG | - | chr8_1:33191912-33191931 | Msa1190310:CDS | 20.0% |
| !! | AAAATTTCAAATTACATGGT+TGG | - | chr8_1:33191916-33191935 | Msa1190310:CDS | 20.0% |
| !!! | ATTTTTTTTACAGGGTAAAT+CGG | - | chr8_1:33191949-33191968 | Msa1190310:CDS | 20.0% |
| !!! | TTTTCTATCACTAAATCTAA+TGG | - | chr8_1:33192150-33192169 | Msa1190310:CDS | 20.0% |
| !!! | AGTTTTGTTTGAGAAATTTT+AGG | + | chr8_1:33192466-33192485 | None:intergenic | 20.0% |
| !! | TAAAGGAATAATAGCAATTA+TGG | + | chr8_1:33191289-33191308 | None:intergenic | 20.0% |
| !!! | TAATTGCTATTATTCCTTTA+TGG | - | chr8_1:33191289-33191308 | Msa1190310:CDS | 20.0% |
| !!! | AATTGCTATTATTCCTTTAT+GGG | - | chr8_1:33191290-33191309 | Msa1190310:CDS | 20.0% |
| !! | AAAATATTGTCTTCAAGTAA+AGG | + | chr8_1:33191561-33191580 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGAAGGATTACAA+GGG | + | chr8_1:33191640-33191659 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTGAAGGATTACA+AGG | + | chr8_1:33191641-33191660 | None:intergenic | 20.0% |
| !! | CAAAAAATCTTCAAATTACA+GGG | + | chr8_1:33191733-33191752 | None:intergenic | 20.0% |
| !! | TCAAAAAATCTTCAAATTAC+AGG | + | chr8_1:33191734-33191753 | None:intergenic | 20.0% |
| !! | AAACCGAAATATTAATGATA+TGG | + | chr8_1:33191840-33191859 | None:intergenic | 20.0% |
| !!! | CCATGTAATTTGAAATTTTT+TGG | + | chr8_1:33191915-33191934 | None:intergenic | 20.0% |
| !! | CCAAAAAATTTCAAATTACA+TGG | - | chr8_1:33191912-33191931 | Msa1190310:CDS | 20.0% |
| !! | AAAATTTCAAATTACATGGT+TGG | - | chr8_1:33191916-33191935 | Msa1190310:CDS | 20.0% |
| !!! | ATTTTTTTTACAGGGTAAAT+CGG | - | chr8_1:33191949-33191968 | Msa1190310:CDS | 20.0% |
| !!! | TTTTCTATCACTAAATCTAA+TGG | - | chr8_1:33192150-33192169 | Msa1190310:CDS | 20.0% |
| !!! | AGTTTTGTTTGAGAAATTTT+AGG | + | chr8_1:33192466-33192485 | None:intergenic | 20.0% |
| ! | AGAAATCGCTAATATTACAA+GGG | + | chr8_1:33191673-33191692 | None:intergenic | 25.0% |
| ! | TAGAAATCGCTAATATTACA+AGG | + | chr8_1:33191674-33191693 | None:intergenic | 25.0% |
| ! | TTTGTAATTTGATGTCATGA+AGG | + | chr8_1:33191764-33191783 | None:intergenic | 25.0% |
| ! | TGAAATTCTCTCAAATTACA+AGG | + | chr8_1:33191805-33191824 | None:intergenic | 25.0% |
| ! | GAAATATTAATGATATGGCA+GGG | + | chr8_1:33191835-33191854 | None:intergenic | 25.0% |
| ! | CTGCCATATCATTAATATTT+CGG | - | chr8_1:33191834-33191853 | Msa1190310:CDS | 25.0% |
| !!! | TACTTCATGTTGATTTGATA+TGG | + | chr8_1:33192384-33192403 | None:intergenic | 25.0% |
| !! | AACTATCTAGAATGATACTA+TGG | - | chr8_1:33192482-33192501 | Msa1190310:intron | 25.0% |
| !! | ACTATCTAGAATGATACTAT+GGG | - | chr8_1:33192483-33192502 | Msa1190310:intron | 25.0% |
| ! | CTAATGAATAATTGATGTGT+AGG | - | chr8_1:33192543-33192562 | Msa1190310:intron | 25.0% |
| ! | ATTTATCAATGTGAAATGCA+GGG | + | chr8_1:33192758-33192777 | None:intergenic | 25.0% |
| ! | AATTTATCAATGTGAAATGC+AGG | + | chr8_1:33192759-33192778 | None:intergenic | 25.0% |
| ! | ACATTGATAAATTGAGAGTA+AGG | - | chr8_1:33192766-33192785 | Msa1190310:intron | 25.0% |
| ! | GCATATTCTGTAAATAAGTT+AGG | + | chr8_1:33192854-33192873 | None:intergenic | 25.0% |
| ! | TTATTTACAGAATATGCTAC+CGG | - | chr8_1:33192857-33192876 | Msa1190310:intron | 25.0% |
| ! | TGCGTGTATTAAATAGAATA+TGG | + | chr8_1:33193067-33193086 | None:intergenic | 25.0% |
| ! | CAGGTGATGTTAATTATTTA+GGG | + | chr8_1:33193173-33193192 | None:intergenic | 25.0% |
| ! | TCAGGTGATGTTAATTATTT+AGG | + | chr8_1:33193174-33193193 | None:intergenic | 25.0% |
| ! | CTAGAAACACATTATATATC+AGG | + | chr8_1:33193192-33193211 | None:intergenic | 25.0% |
| ! | CTGATATATAATGTGTTTCT+AGG | - | chr8_1:33193190-33193209 | Msa1190310:intron | 25.0% |
| ! | TGATTTATTAGGCTTACTTA+TGG | - | chr8_1:33193332-33193351 | Msa1190310:CDS | 25.0% |
| ! | AGAAATCGCTAATATTACAA+GGG | + | chr8_1:33191673-33191692 | None:intergenic | 25.0% |
| ! | TAGAAATCGCTAATATTACA+AGG | + | chr8_1:33191674-33191693 | None:intergenic | 25.0% |
| ! | TTTGTAATTTGATGTCATGA+AGG | + | chr8_1:33191764-33191783 | None:intergenic | 25.0% |
| ! | TGAAATTCTCTCAAATTACA+AGG | + | chr8_1:33191805-33191824 | None:intergenic | 25.0% |
| ! | GAAATATTAATGATATGGCA+GGG | + | chr8_1:33191835-33191854 | None:intergenic | 25.0% |
| ! | CTGCCATATCATTAATATTT+CGG | - | chr8_1:33191834-33191853 | Msa1190310:CDS | 25.0% |
| !!! | TACTTCATGTTGATTTGATA+TGG | + | chr8_1:33192384-33192403 | None:intergenic | 25.0% |
| !! | AACTATCTAGAATGATACTA+TGG | - | chr8_1:33192482-33192501 | Msa1190310:intron | 25.0% |
| !! | ACTATCTAGAATGATACTAT+GGG | - | chr8_1:33192483-33192502 | Msa1190310:intron | 25.0% |
| ! | CTAATGAATAATTGATGTGT+AGG | - | chr8_1:33192543-33192562 | Msa1190310:intron | 25.0% |
| ! | ATTTATCAATGTGAAATGCA+GGG | + | chr8_1:33192758-33192777 | None:intergenic | 25.0% |
| ! | AATTTATCAATGTGAAATGC+AGG | + | chr8_1:33192759-33192778 | None:intergenic | 25.0% |
| ! | ACATTGATAAATTGAGAGTA+AGG | - | chr8_1:33192766-33192785 | Msa1190310:intron | 25.0% |
| ! | GCATATTCTGTAAATAAGTT+AGG | + | chr8_1:33192854-33192873 | None:intergenic | 25.0% |
| ! | TTATTTACAGAATATGCTAC+CGG | - | chr8_1:33192857-33192876 | Msa1190310:intron | 25.0% |
| ! | TGCGTGTATTAAATAGAATA+TGG | + | chr8_1:33193067-33193086 | None:intergenic | 25.0% |
| ! | CAGGTGATGTTAATTATTTA+GGG | + | chr8_1:33193173-33193192 | None:intergenic | 25.0% |
| ! | TCAGGTGATGTTAATTATTT+AGG | + | chr8_1:33193174-33193193 | None:intergenic | 25.0% |
| ! | CTAGAAACACATTATATATC+AGG | + | chr8_1:33193192-33193211 | None:intergenic | 25.0% |
| ! | CTGATATATAATGTGTTTCT+AGG | - | chr8_1:33193190-33193209 | Msa1190310:intron | 25.0% |
| ! | TGATTTATTAGGCTTACTTA+TGG | - | chr8_1:33193332-33193351 | Msa1190310:CDS | 25.0% |
| !! | TTTGAGTTGAACAACTTGTA+TGG | + | chr8_1:33191396-33191415 | None:intergenic | 30.0% |
| CGAAATATTAATGATATGGC+AGG | + | chr8_1:33191836-33191855 | None:intergenic | 30.0% | |
| TACAAAATCGATGATATGAC+GGG | + | chr8_1:33191866-33191885 | None:intergenic | 30.0% | |
| GTACAAAATCGATGATATGA+CGG | + | chr8_1:33191867-33191886 | None:intergenic | 30.0% | |
| TTGACAAAAATGCTAAACCT+AGG | - | chr8_1:33192249-33192268 | Msa1190310:CDS | 30.0% | |
| !! | TTCATGTTGATTTGATATGG+TGG | + | chr8_1:33192381-33192400 | None:intergenic | 30.0% |
| !!! | TTTGAGAAATTTTAGGACAG+TGG | + | chr8_1:33192459-33192478 | None:intergenic | 30.0% |
| TATTCATTAGCAATCATCGT+TGG | + | chr8_1:33192533-33192552 | None:intergenic | 30.0% | |
| !! | TAGGCAAGAGTTCATTTTTA+TGG | - | chr8_1:33192562-33192581 | Msa1190310:intron | 30.0% |
| !! | AGGCAAGAGTTCATTTTTAT+GGG | - | chr8_1:33192563-33192582 | Msa1190310:intron | 30.0% |
| !! | AAGAGTTCATTTTTATGGGA+AGG | - | chr8_1:33192567-33192586 | Msa1190310:intron | 30.0% |
| !! | ACACTTGTTTGATTTGTTCA+GGG | + | chr8_1:33192620-33192639 | None:intergenic | 30.0% |
| !! | AACACTTGTTTGATTTGTTC+AGG | + | chr8_1:33192621-33192640 | None:intergenic | 30.0% |
| !! | GTTGGATTAGTAAGTTATGA+GGG | - | chr8_1:33192699-33192718 | Msa1190310:intron | 30.0% |
| ! | TCCATTTGCTAATCATATCA+TGG | + | chr8_1:33192899-33192918 | None:intergenic | 30.0% |
| TGATATGATTAGCAAATGGA+AGG | - | chr8_1:33192899-33192918 | Msa1190310:intron | 30.0% | |
| ATTTGATCTTATAAGGTTGC+AGG | - | chr8_1:33193040-33193059 | Msa1190310:intron | 30.0% | |
| TTTGATCTTATAAGGTTGCA+GGG | - | chr8_1:33193041-33193060 | Msa1190310:intron | 30.0% | |
| TGTTTGTCTTACCATATCAT+TGG | + | chr8_1:33193092-33193111 | None:intergenic | 30.0% | |
| AGAGATTTATGATTTAGTCG+AGG | - | chr8_1:33193257-33193276 | Msa1190310:intron | 30.0% | |
| GAGATTTATGATTTAGTCGA+GGG | - | chr8_1:33193258-33193277 | Msa1190310:intron | 30.0% | |
| GCCATCAATGATGATTTATT+AGG | - | chr8_1:33193321-33193340 | Msa1190310:intron | 30.0% | |
| GCCTAATAAATCATCATTGA+TGG | + | chr8_1:33193325-33193344 | None:intergenic | 30.0% | |
| TCAAATAAGCTTGAAACTCA+AGG | - | chr8_1:33193357-33193376 | Msa1190310:CDS | 30.0% | |
| ! | ATCTTTGTTAGTTTGGACAA+TGG | - | chr8_1:33193470-33193489 | Msa1190310:CDS | 30.0% |
| ! | CAAGAAGTTTTGCAAGTTTT+TGG | - | chr8_1:33193534-33193553 | Msa1190310:CDS | 30.0% |
| AACCAAAATCCAAATCATGA+TGG | - | chr8_1:33193558-33193577 | Msa1190310:CDS | 30.0% | |
| ACCAAAATCCAAATCATGAT+GGG | - | chr8_1:33193559-33193578 | Msa1190310:CDS | 30.0% | |
| !! | TTTGAGTTGAACAACTTGTA+TGG | + | chr8_1:33191396-33191415 | None:intergenic | 30.0% |
| CGAAATATTAATGATATGGC+AGG | + | chr8_1:33191836-33191855 | None:intergenic | 30.0% | |
| TACAAAATCGATGATATGAC+GGG | + | chr8_1:33191866-33191885 | None:intergenic | 30.0% | |
| GTACAAAATCGATGATATGA+CGG | + | chr8_1:33191867-33191886 | None:intergenic | 30.0% | |
| TTGACAAAAATGCTAAACCT+AGG | - | chr8_1:33192249-33192268 | Msa1190310:CDS | 30.0% | |
| !! | TTCATGTTGATTTGATATGG+TGG | + | chr8_1:33192381-33192400 | None:intergenic | 30.0% |
| !!! | TTTGAGAAATTTTAGGACAG+TGG | + | chr8_1:33192459-33192478 | None:intergenic | 30.0% |
| TATTCATTAGCAATCATCGT+TGG | + | chr8_1:33192533-33192552 | None:intergenic | 30.0% | |
| !! | TAGGCAAGAGTTCATTTTTA+TGG | - | chr8_1:33192562-33192581 | Msa1190310:intron | 30.0% |
| !! | AGGCAAGAGTTCATTTTTAT+GGG | - | chr8_1:33192563-33192582 | Msa1190310:intron | 30.0% |
| !! | AAGAGTTCATTTTTATGGGA+AGG | - | chr8_1:33192567-33192586 | Msa1190310:intron | 30.0% |
| !! | ACACTTGTTTGATTTGTTCA+GGG | + | chr8_1:33192620-33192639 | None:intergenic | 30.0% |
| !! | AACACTTGTTTGATTTGTTC+AGG | + | chr8_1:33192621-33192640 | None:intergenic | 30.0% |
| !! | GTTGGATTAGTAAGTTATGA+GGG | - | chr8_1:33192699-33192718 | Msa1190310:intron | 30.0% |
| ! | TCCATTTGCTAATCATATCA+TGG | + | chr8_1:33192899-33192918 | None:intergenic | 30.0% |
| TGATATGATTAGCAAATGGA+AGG | - | chr8_1:33192899-33192918 | Msa1190310:intron | 30.0% | |
| ATTTGATCTTATAAGGTTGC+AGG | - | chr8_1:33193040-33193059 | Msa1190310:intron | 30.0% | |
| TTTGATCTTATAAGGTTGCA+GGG | - | chr8_1:33193041-33193060 | Msa1190310:intron | 30.0% | |
| TGTTTGTCTTACCATATCAT+TGG | + | chr8_1:33193092-33193111 | None:intergenic | 30.0% | |
| AGAGATTTATGATTTAGTCG+AGG | - | chr8_1:33193257-33193276 | Msa1190310:intron | 30.0% | |
| GAGATTTATGATTTAGTCGA+GGG | - | chr8_1:33193258-33193277 | Msa1190310:intron | 30.0% | |
| GCCATCAATGATGATTTATT+AGG | - | chr8_1:33193321-33193340 | Msa1190310:intron | 30.0% | |
| GCCTAATAAATCATCATTGA+TGG | + | chr8_1:33193325-33193344 | None:intergenic | 30.0% | |
| TCAAATAAGCTTGAAACTCA+AGG | - | chr8_1:33193357-33193376 | Msa1190310:CDS | 30.0% | |
| ! | ATCTTTGTTAGTTTGGACAA+TGG | - | chr8_1:33193470-33193489 | Msa1190310:CDS | 30.0% |
| ! | CAAGAAGTTTTGCAAGTTTT+TGG | - | chr8_1:33193534-33193553 | Msa1190310:CDS | 30.0% |
| AACCAAAATCCAAATCATGA+TGG | - | chr8_1:33193558-33193577 | Msa1190310:CDS | 30.0% | |
| ACCAAAATCCAAATCATGAT+GGG | - | chr8_1:33193559-33193578 | Msa1190310:CDS | 30.0% | |
| ! | AGAAGCTTTTCCAATCTCTT+TGG | + | chr8_1:33191348-33191367 | None:intergenic | 35.0% |
| GTTCAACTCAAAGTTGAAGA+TGG | - | chr8_1:33191404-33191423 | Msa1190310:CDS | 35.0% | |
| ! | GGTATCAAATGGTTTGGATT+TGG | + | chr8_1:33191439-33191458 | None:intergenic | 35.0% |
| TGTACGAATGAAAAGATCTG+TGG | + | chr8_1:33191477-33191496 | None:intergenic | 35.0% | |
| !! | GCATATGTTGTTTCGAATCT+AGG | - | chr8_1:33191531-33191550 | Msa1190310:CDS | 35.0% |
| ACAAAATCGATGATATGACG+GGG | + | chr8_1:33191865-33191884 | None:intergenic | 35.0% | |
| TGTACAGTCAAAACTCATGA+AGG | - | chr8_1:33191882-33191901 | Msa1190310:CDS | 35.0% | |
| TCGGAATTCGCTAATATTAG+AGG | - | chr8_1:33191968-33191987 | Msa1190310:intron | 35.0% | |
| CGGAATTCGCTAATATTAGA+GGG | - | chr8_1:33191969-33191988 | Msa1190310:intron | 35.0% | |
| GGAATTCGCTAATATTAGAG+GGG | - | chr8_1:33191970-33191989 | Msa1190310:intron | 35.0% | |
| AAAATGCTAACACGTCATTC+GGG | + | chr8_1:33192078-33192097 | None:intergenic | 35.0% | |
| CAAAATGCTAACACGTCATT+CGG | + | chr8_1:33192079-33192098 | None:intergenic | 35.0% | |
| ! | AATGACGTGTTAGCATTTTG+TGG | - | chr8_1:33192079-33192098 | Msa1190310:CDS | 35.0% |
| TTGTTAGACACAATCATCGT+TGG | + | chr8_1:33192408-33192427 | None:intergenic | 35.0% | |
| CTAGAATGATACTATGGGTT+TGG | - | chr8_1:33192488-33192507 | Msa1190310:intron | 35.0% | |
| AATACCAAAAGTGATCATCG+CGG | - | chr8_1:33192593-33192612 | Msa1190310:intron | 35.0% | |
| AATGGAATCGAACTTTGGTT+TGG | + | chr8_1:33192664-33192683 | None:intergenic | 35.0% | |
| TTAGCAATGGAATCGAACTT+TGG | + | chr8_1:33192669-33192688 | None:intergenic | 35.0% | |
| AACGAACAAACACTTAGCAA+TGG | + | chr8_1:33192682-33192701 | None:intergenic | 35.0% | |
| ATTGCTAAGTGTTTGTTCGT+TGG | - | chr8_1:33192681-33192700 | Msa1190310:intron | 35.0% | |
| !! | CGTTGGATTAGTAAGTTATG+AGG | - | chr8_1:33192698-33192717 | Msa1190310:intron | 35.0% |
| GCCATGATATGATTAGCAAA+TGG | - | chr8_1:33192895-33192914 | Msa1190310:intron | 35.0% | |
| AATCATGTGAGATTGATGTC+CGG | - | chr8_1:33192940-33192959 | Msa1190310:intron | 35.0% | |
| !!! | TCAAGTTTTGAATGAAAGGC+CGG | + | chr8_1:33192962-33192981 | None:intergenic | 35.0% |
| !!! | CCAGTCAAGTTTTGAATGAA+AGG | + | chr8_1:33192966-33192985 | None:intergenic | 35.0% |
| CCTTTCATTCAAAACTTGAC+TGG | - | chr8_1:33192963-33192982 | Msa1190310:intron | 35.0% | |
| GATATGGTAAGACAAACATG+TGG | - | chr8_1:33193094-33193113 | Msa1190310:intron | 35.0% | |
| ! | GTAAGACAAACATGTGGTTT+TGG | - | chr8_1:33193100-33193119 | Msa1190310:intron | 35.0% |
| TAAAATACGAGAGAAAGCCA+TGG | - | chr8_1:33193287-33193306 | Msa1190310:intron | 35.0% | |
| !! | AGTTTGGACAATGGTGTTAT+TGG | - | chr8_1:33193479-33193498 | Msa1190310:CDS | 35.0% |
| !! | ACCCATCATGATTTGGATTT+TGG | + | chr8_1:33193563-33193582 | None:intergenic | 35.0% |
| TGACTTAACCCATCATGATT+TGG | + | chr8_1:33193570-33193589 | None:intergenic | 35.0% | |
| ! | AGAAGCTTTTCCAATCTCTT+TGG | + | chr8_1:33191348-33191367 | None:intergenic | 35.0% |
| GTTCAACTCAAAGTTGAAGA+TGG | - | chr8_1:33191404-33191423 | Msa1190310:CDS | 35.0% | |
| ! | GGTATCAAATGGTTTGGATT+TGG | + | chr8_1:33191439-33191458 | None:intergenic | 35.0% |
| TGTACGAATGAAAAGATCTG+TGG | + | chr8_1:33191477-33191496 | None:intergenic | 35.0% | |
| !! | GCATATGTTGTTTCGAATCT+AGG | - | chr8_1:33191531-33191550 | Msa1190310:CDS | 35.0% |
| ACAAAATCGATGATATGACG+GGG | + | chr8_1:33191865-33191884 | None:intergenic | 35.0% | |
| TGTACAGTCAAAACTCATGA+AGG | - | chr8_1:33191882-33191901 | Msa1190310:CDS | 35.0% | |
| TCGGAATTCGCTAATATTAG+AGG | - | chr8_1:33191968-33191987 | Msa1190310:intron | 35.0% | |
| CGGAATTCGCTAATATTAGA+GGG | - | chr8_1:33191969-33191988 | Msa1190310:intron | 35.0% | |
| GGAATTCGCTAATATTAGAG+GGG | - | chr8_1:33191970-33191989 | Msa1190310:intron | 35.0% | |
| AAAATGCTAACACGTCATTC+GGG | + | chr8_1:33192078-33192097 | None:intergenic | 35.0% | |
| CAAAATGCTAACACGTCATT+CGG | + | chr8_1:33192079-33192098 | None:intergenic | 35.0% | |
| ! | AATGACGTGTTAGCATTTTG+TGG | - | chr8_1:33192079-33192098 | Msa1190310:CDS | 35.0% |
| TTGTTAGACACAATCATCGT+TGG | + | chr8_1:33192408-33192427 | None:intergenic | 35.0% | |
| CTAGAATGATACTATGGGTT+TGG | - | chr8_1:33192488-33192507 | Msa1190310:intron | 35.0% | |
| AATACCAAAAGTGATCATCG+CGG | - | chr8_1:33192593-33192612 | Msa1190310:intron | 35.0% | |
| AATGGAATCGAACTTTGGTT+TGG | + | chr8_1:33192664-33192683 | None:intergenic | 35.0% | |
| TTAGCAATGGAATCGAACTT+TGG | + | chr8_1:33192669-33192688 | None:intergenic | 35.0% | |
| AACGAACAAACACTTAGCAA+TGG | + | chr8_1:33192682-33192701 | None:intergenic | 35.0% | |
| ATTGCTAAGTGTTTGTTCGT+TGG | - | chr8_1:33192681-33192700 | Msa1190310:intron | 35.0% | |
| !! | CGTTGGATTAGTAAGTTATG+AGG | - | chr8_1:33192698-33192717 | Msa1190310:intron | 35.0% |
| GCCATGATATGATTAGCAAA+TGG | - | chr8_1:33192895-33192914 | Msa1190310:intron | 35.0% | |
| AATCATGTGAGATTGATGTC+CGG | - | chr8_1:33192940-33192959 | Msa1190310:intron | 35.0% | |
| !!! | TCAAGTTTTGAATGAAAGGC+CGG | + | chr8_1:33192962-33192981 | None:intergenic | 35.0% |
| !!! | CCAGTCAAGTTTTGAATGAA+AGG | + | chr8_1:33192966-33192985 | None:intergenic | 35.0% |
| CCTTTCATTCAAAACTTGAC+TGG | - | chr8_1:33192963-33192982 | Msa1190310:intron | 35.0% | |
| GATATGGTAAGACAAACATG+TGG | - | chr8_1:33193094-33193113 | Msa1190310:intron | 35.0% | |
| ! | GTAAGACAAACATGTGGTTT+TGG | - | chr8_1:33193100-33193119 | Msa1190310:intron | 35.0% |
| TAAAATACGAGAGAAAGCCA+TGG | - | chr8_1:33193287-33193306 | Msa1190310:intron | 35.0% | |
| !! | AGTTTGGACAATGGTGTTAT+TGG | - | chr8_1:33193479-33193498 | Msa1190310:CDS | 35.0% |
| !! | ACCCATCATGATTTGGATTT+TGG | + | chr8_1:33193563-33193582 | None:intergenic | 35.0% |
| TGACTTAACCCATCATGATT+TGG | + | chr8_1:33193570-33193589 | None:intergenic | 35.0% | |
| TATGGCTGTAAGAATCCAGA+AGG | + | chr8_1:33191271-33191290 | None:intergenic | 40.0% | |
| ! | GAAAAGCTTCTAAGAGCACA+AGG | - | chr8_1:33191357-33191376 | Msa1190310:CDS | 40.0% |
| !! | GTTGGAGGTATCAAATGGTT+TGG | + | chr8_1:33191445-33191464 | None:intergenic | 40.0% |
| !! | ACATCGTTGGAGGTATCAAA+TGG | + | chr8_1:33191450-33191469 | None:intergenic | 40.0% |
| CACCAAACTGTCCGAAAATA+CGG | - | chr8_1:33191495-33191514 | Msa1190310:CDS | 40.0% | |
| ! | TACCGTATTTTCGGACAGTT+TGG | + | chr8_1:33191500-33191519 | None:intergenic | 40.0% |
| CAAAATCGATGATATGACGG+GGG | + | chr8_1:33191864-33191883 | None:intergenic | 40.0% | |
| ! | CGTGTTAGCATTTTGTGGTA+CGG | - | chr8_1:33192084-33192103 | Msa1190310:CDS | 40.0% |
| ! | TTAGCATTTTGTGGTACGGA+TGG | - | chr8_1:33192088-33192107 | Msa1190310:CDS | 40.0% |
| GATCCTCTACATCAATTGCA+CGG | + | chr8_1:33192182-33192201 | None:intergenic | 40.0% | |
| AAATGCTAAACCTAGGAGTC+TGG | - | chr8_1:33192256-33192275 | Msa1190310:CDS | 40.0% | |
| TAAGTTATGAGGGTGACGAA+TGG | - | chr8_1:33192709-33192728 | Msa1190310:intron | 40.0% | |
| AAGTTATGAGGGTGACGAAT+GGG | - | chr8_1:33192710-33192729 | Msa1190310:intron | 40.0% | |
| ! | TGGCTGCTTTGAATAAATGC+CGG | + | chr8_1:33192879-33192898 | None:intergenic | 40.0% |
| !! | GCGATTTCTAGAACAGCATT+TGG | - | chr8_1:33192990-33193009 | Msa1190310:intron | 40.0% |
| ATACACGCAGTCCAATGATA+TGG | - | chr8_1:33193078-33193097 | Msa1190310:intron | 40.0% | |
| TACCTACAAGTTCCAACAAG+AGG | - | chr8_1:33193217-33193236 | Msa1190310:intron | 40.0% | |
| ATCCTCTTGTTGGAACTTGT+AGG | + | chr8_1:33193222-33193241 | None:intergenic | 40.0% | |
| AAGTTCCAACAAGAGGATGA+GGG | - | chr8_1:33193224-33193243 | Msa1190310:intron | 40.0% | |
| CATGAAAAGAGTAAGACAGC+TGG | - | chr8_1:33193381-33193400 | Msa1190310:CDS | 40.0% | |
| TGCAAGCAATTCTACATTGC+AGG | - | chr8_1:33193432-33193451 | Msa1190310:CDS | 40.0% | |
| CCAAACTAACAAAGATGCAG+TGG | + | chr8_1:33193466-33193485 | None:intergenic | 40.0% | |
| CCACTGCATCTTTGTTAGTT+TGG | - | chr8_1:33193463-33193482 | Msa1190310:CDS | 40.0% | |
| ! | TATTGGCTAGGTTTCCTGAA+TGG | - | chr8_1:33193496-33193515 | Msa1190310:CDS | 40.0% |
| TATGGCTGTAAGAATCCAGA+AGG | + | chr8_1:33191271-33191290 | None:intergenic | 40.0% | |
| ! | GAAAAGCTTCTAAGAGCACA+AGG | - | chr8_1:33191357-33191376 | Msa1190310:CDS | 40.0% |
| !! | GTTGGAGGTATCAAATGGTT+TGG | + | chr8_1:33191445-33191464 | None:intergenic | 40.0% |
| !! | ACATCGTTGGAGGTATCAAA+TGG | + | chr8_1:33191450-33191469 | None:intergenic | 40.0% |
| CACCAAACTGTCCGAAAATA+CGG | - | chr8_1:33191495-33191514 | Msa1190310:CDS | 40.0% | |
| ! | TACCGTATTTTCGGACAGTT+TGG | + | chr8_1:33191500-33191519 | None:intergenic | 40.0% |
| CAAAATCGATGATATGACGG+GGG | + | chr8_1:33191864-33191883 | None:intergenic | 40.0% | |
| ! | CGTGTTAGCATTTTGTGGTA+CGG | - | chr8_1:33192084-33192103 | Msa1190310:CDS | 40.0% |
| ! | TTAGCATTTTGTGGTACGGA+TGG | - | chr8_1:33192088-33192107 | Msa1190310:CDS | 40.0% |
| GATCCTCTACATCAATTGCA+CGG | + | chr8_1:33192182-33192201 | None:intergenic | 40.0% | |
| AAATGCTAAACCTAGGAGTC+TGG | - | chr8_1:33192256-33192275 | Msa1190310:CDS | 40.0% | |
| TAAGTTATGAGGGTGACGAA+TGG | - | chr8_1:33192709-33192728 | Msa1190310:intron | 40.0% | |
| AAGTTATGAGGGTGACGAAT+GGG | - | chr8_1:33192710-33192729 | Msa1190310:intron | 40.0% | |
| ! | TGGCTGCTTTGAATAAATGC+CGG | + | chr8_1:33192879-33192898 | None:intergenic | 40.0% |
| !! | GCGATTTCTAGAACAGCATT+TGG | - | chr8_1:33192990-33193009 | Msa1190310:intron | 40.0% |
| ATACACGCAGTCCAATGATA+TGG | - | chr8_1:33193078-33193097 | Msa1190310:intron | 40.0% | |
| TACCTACAAGTTCCAACAAG+AGG | - | chr8_1:33193217-33193236 | Msa1190310:intron | 40.0% | |
| ATCCTCTTGTTGGAACTTGT+AGG | + | chr8_1:33193222-33193241 | None:intergenic | 40.0% | |
| AAGTTCCAACAAGAGGATGA+GGG | - | chr8_1:33193224-33193243 | Msa1190310:intron | 40.0% | |
| CATGAAAAGAGTAAGACAGC+TGG | - | chr8_1:33193381-33193400 | Msa1190310:CDS | 40.0% | |
| TGCAAGCAATTCTACATTGC+AGG | - | chr8_1:33193432-33193451 | Msa1190310:CDS | 40.0% | |
| CCAAACTAACAAAGATGCAG+TGG | + | chr8_1:33193466-33193485 | None:intergenic | 40.0% | |
| CCACTGCATCTTTGTTAGTT+TGG | - | chr8_1:33193463-33193482 | Msa1190310:CDS | 40.0% | |
| ! | TATTGGCTAGGTTTCCTGAA+TGG | - | chr8_1:33193496-33193515 | Msa1190310:CDS | 40.0% |
| GTAAGAATCCAGAAGGTAGC+AGG | + | chr8_1:33191264-33191283 | None:intergenic | 45.0% | |
| ! | AGCTTCTGGAAAGCCCATAA+AGG | + | chr8_1:33191306-33191325 | None:intergenic | 45.0% |
| TCCAGAAGCTGAATTCCTTG+TGG | - | chr8_1:33191316-33191335 | Msa1190310:CDS | 45.0% | |
| ACCACAAGGAATTCAGCTTC+TGG | + | chr8_1:33191320-33191339 | None:intergenic | 45.0% | |
| TCTCTTTGGTCTCAACCACA+AGG | + | chr8_1:33191334-33191353 | None:intergenic | 45.0% | |
| GTGGTTGAGACCAAAGAGAT+TGG | - | chr8_1:33191335-33191354 | Msa1190310:CDS | 45.0% | |
| ! | CTAAGAGCACAAGGTCTTCA+AGG | - | chr8_1:33191366-33191385 | Msa1190310:CDS | 45.0% |
| TAACACGTCATTCGGGAAAC+TGG | + | chr8_1:33192071-33192090 | None:intergenic | 45.0% | |
| TTGCCGTGCAATTGATGTAG+AGG | - | chr8_1:33192176-33192195 | Msa1190310:CDS | 45.0% | |
| GTTTCGAAATCCAGACTCCT+AGG | + | chr8_1:33192269-33192288 | None:intergenic | 45.0% | |
| GGAGTCTGGATTTCGAAACA+AGG | - | chr8_1:33192270-33192289 | Msa1190310:intron | 45.0% | |
| GACTTTCAAGCAACCACACT+TGG | - | chr8_1:33192292-33192311 | Msa1190310:intron | 45.0% | |
| GCAACTAGACGAACATGACA+TGG | - | chr8_1:33192314-33192333 | Msa1190310:intron | 45.0% | |
| CTAGACGAACATGACATGGT+TGG | - | chr8_1:33192318-33192337 | Msa1190310:intron | 45.0% | |
| ! | AGTGGTTTGCAACTCTTTCG+AGG | + | chr8_1:33192441-33192460 | None:intergenic | 45.0% |
| CAAGTTCCAACAAGAGGATG+AGG | - | chr8_1:33193223-33193242 | Msa1190310:intron | 45.0% | |
| GATTTCCCTCATCCTCTTGT+TGG | + | chr8_1:33193232-33193251 | None:intergenic | 45.0% | |
| !! | GGACAATGGTGTTATTGGCT+AGG | - | chr8_1:33193484-33193503 | Msa1190310:CDS | 45.0% |
| GTAAGAATCCAGAAGGTAGC+AGG | + | chr8_1:33191264-33191283 | None:intergenic | 45.0% | |
| ! | AGCTTCTGGAAAGCCCATAA+AGG | + | chr8_1:33191306-33191325 | None:intergenic | 45.0% |
| TCCAGAAGCTGAATTCCTTG+TGG | - | chr8_1:33191316-33191335 | Msa1190310:CDS | 45.0% | |
| ACCACAAGGAATTCAGCTTC+TGG | + | chr8_1:33191320-33191339 | None:intergenic | 45.0% | |
| TCTCTTTGGTCTCAACCACA+AGG | + | chr8_1:33191334-33191353 | None:intergenic | 45.0% | |
| GTGGTTGAGACCAAAGAGAT+TGG | - | chr8_1:33191335-33191354 | Msa1190310:CDS | 45.0% | |
| ! | CTAAGAGCACAAGGTCTTCA+AGG | - | chr8_1:33191366-33191385 | Msa1190310:CDS | 45.0% |
| TAACACGTCATTCGGGAAAC+TGG | + | chr8_1:33192071-33192090 | None:intergenic | 45.0% | |
| TTGCCGTGCAATTGATGTAG+AGG | - | chr8_1:33192176-33192195 | Msa1190310:CDS | 45.0% | |
| GTTTCGAAATCCAGACTCCT+AGG | + | chr8_1:33192269-33192288 | None:intergenic | 45.0% | |
| GGAGTCTGGATTTCGAAACA+AGG | - | chr8_1:33192270-33192289 | Msa1190310:intron | 45.0% | |
| GACTTTCAAGCAACCACACT+TGG | - | chr8_1:33192292-33192311 | Msa1190310:intron | 45.0% | |
| GCAACTAGACGAACATGACA+TGG | - | chr8_1:33192314-33192333 | Msa1190310:intron | 45.0% | |
| CTAGACGAACATGACATGGT+TGG | - | chr8_1:33192318-33192337 | Msa1190310:intron | 45.0% | |
| ! | AGTGGTTTGCAACTCTTTCG+AGG | + | chr8_1:33192441-33192460 | None:intergenic | 45.0% |
| CAAGTTCCAACAAGAGGATG+AGG | - | chr8_1:33193223-33193242 | Msa1190310:intron | 45.0% | |
| GATTTCCCTCATCCTCTTGT+TGG | + | chr8_1:33193232-33193251 | None:intergenic | 45.0% | |
| !! | GGACAATGGTGTTATTGGCT+AGG | - | chr8_1:33193484-33193503 | Msa1190310:CDS | 45.0% |
| CACTTTCACCTGCTACCTTC+TGG | - | chr8_1:33191253-33191272 | Msa1190310:CDS | 50.0% | |
| ATTCGGGAAACTGGTCGTGA+AGG | + | chr8_1:33192062-33192081 | None:intergenic | 50.0% | |
| GTTCGTCTAGTTGCCAAGTG+TGG | + | chr8_1:33192308-33192327 | None:intergenic | 50.0% | |
| TTTGGCAGCAGCTATGTAGC+AGG | - | chr8_1:33193008-33193027 | Msa1190310:intron | 50.0% | |
| TTGGCAGCAGCTATGTAGCA+GGG | - | chr8_1:33193009-33193028 | Msa1190310:intron | 50.0% | |
| CGAGAGAAAGCCATGGACAA+TGG | - | chr8_1:33193294-33193313 | Msa1190310:intron | 50.0% | |
| GATGGCTTCTCCATTGTCCA+TGG | + | chr8_1:33193307-33193326 | None:intergenic | 50.0% | |
| CTTGCACGTTCTTGCCATTC+AGG | + | chr8_1:33193513-33193532 | None:intergenic | 50.0% | |
| CTGAATGGCAAGAACGTGCA+AGG | - | chr8_1:33193511-33193530 | Msa1190310:CDS | 50.0% | |
| CACTTTCACCTGCTACCTTC+TGG | - | chr8_1:33191253-33191272 | Msa1190310:CDS | 50.0% | |
| ATTCGGGAAACTGGTCGTGA+AGG | + | chr8_1:33192062-33192081 | None:intergenic | 50.0% | |
| GTTCGTCTAGTTGCCAAGTG+TGG | + | chr8_1:33192308-33192327 | None:intergenic | 50.0% | |
| TTTGGCAGCAGCTATGTAGC+AGG | - | chr8_1:33193008-33193027 | Msa1190310:intron | 50.0% | |
| TTGGCAGCAGCTATGTAGCA+GGG | - | chr8_1:33193009-33193028 | Msa1190310:intron | 50.0% | |
| CGAGAGAAAGCCATGGACAA+TGG | - | chr8_1:33193294-33193313 | Msa1190310:intron | 50.0% | |
| GATGGCTTCTCCATTGTCCA+TGG | + | chr8_1:33193307-33193326 | None:intergenic | 50.0% | |
| CTTGCACGTTCTTGCCATTC+AGG | + | chr8_1:33193513-33193532 | None:intergenic | 50.0% | |
| CTGAATGGCAAGAACGTGCA+AGG | - | chr8_1:33193511-33193530 | Msa1190310:CDS | 50.0% | |
| GATCTGTGGCGCAACATCGT+TGG | + | chr8_1:33191463-33191482 | None:intergenic | 55.0% | |
| ! | GGGTCCGCGATGATCACTTT+TGG | + | chr8_1:33192600-33192619 | None:intergenic | 55.0% |
| GATCTGTGGCGCAACATCGT+TGG | + | chr8_1:33191463-33191482 | None:intergenic | 55.0% | |
| ! | GGGTCCGCGATGATCACTTT+TGG | + | chr8_1:33192600-33192619 | None:intergenic | 55.0% |
| CTGTGGCGCAACATCGTTGG+AGG | + | chr8_1:33191460-33191479 | None:intergenic | 60.0% | |
| CTGTGGCGCAACATCGTTGG+AGG | + | chr8_1:33191460-33191479 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 33191246 | 33193599 | 33191246 | ID=Msa1190310;Name=Msa1190310 |
| chr8_1 | mRNA | 33191246 | 33193599 | 33191246 | ID=Msa1190310-mRNA-1;Parent=Msa1190310;Name=Msa1190310-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|0.33|0|1|1|1|4|0|370 |
| chr8_1 | exon | 33193329 | 33193599 | 33193329 | ID=Msa1190310-mRNA-1:exon:11236;Parent=Msa1190310-mRNA-1 |
| chr8_1 | exon | 33192063 | 33192280 | 33192063 | ID=Msa1190310-mRNA-1:exon:11235;Parent=Msa1190310-mRNA-1 |
| chr8_1 | exon | 33191746 | 33191978 | 33191746 | ID=Msa1190310-mRNA-1:exon:11234;Parent=Msa1190310-mRNA-1 |
| chr8_1 | exon | 33191246 | 33191633 | 33191246 | ID=Msa1190310-mRNA-1:exon:11233;Parent=Msa1190310-mRNA-1 |
| chr8_1 | CDS | 33193329 | 33193599 | 33193329 | ID=Msa1190310-mRNA-1:cds;Parent=Msa1190310-mRNA-1 |
| chr8_1 | CDS | 33192063 | 33192280 | 33192063 | ID=Msa1190310-mRNA-1:cds;Parent=Msa1190310-mRNA-1 |
| chr8_1 | CDS | 33191746 | 33191978 | 33191746 | ID=Msa1190310-mRNA-1:cds;Parent=Msa1190310-mRNA-1 |
| chr8_1 | CDS | 33191246 | 33191633 | 33191246 | ID=Msa1190310-mRNA-1:cds;Parent=Msa1190310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
