AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1198050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1198050 MtrunA17_Chr8g0367221 87.120 559 28 2 1 515 1188 1746 0.0 989
Msa1198050 MtrunA17_Chr8g0367221 73.154 447 119 1 65 511 20 465 0.0 694
Msa1198050 MtrunA17_Chr8g0367221 65.184 517 157 7 1 506 743 1247 0.0 667
Msa1198050 MtrunA17_Chr8g0367221 81.818 66 12 0 1 66 401 466 2.20e-27 117
Msa1198050 MtrunA17_Chr7g0241801 40.940 447 226 7 65 510 17 426 1.24e-119 358
Msa1198050 MtrunA17_Chr7g0241781 41.387 447 224 8 65 510 17 426 1.09e-116 351
Msa1198050 MtrunA17_Chr2g0278741 40.535 449 254 4 65 509 105 544 3.28e-114 348
Msa1198050 MtrunA17_Chr2g0302851 38.137 451 259 6 65 510 24 459 3.86e-112 340
Msa1198050 MtrunA17_Chr6g0464091 40.044 452 256 6 65 510 26 468 1.71e-110 336
Msa1198050 MtrunA17_Chr2g0278721 39.254 456 265 6 65 512 525 976 2.35e-110 350
Msa1198050 MtrunA17_Chr2g0278721 37.605 476 277 6 47 514 5 468 6.95e-105 335
Msa1198050 MtrunA17_Chr4g0069611 39.159 452 253 7 65 510 23 458 4.31e-110 335
Msa1198050 MtrunA17_Chr4g0039881 37.333 450 262 5 66 510 1 435 1.20e-108 330
Msa1198050 MtrunA17_Chr8g0336251 38.395 461 267 8 65 515 15 468 6.25e-106 324
Msa1198050 MtrunA17_Chr8g0336321 38.395 461 267 8 65 515 15 468 1.14e-105 324
Msa1198050 MtrunA17_Chr6g0466831 37.712 472 271 8 47 510 5 461 1.43e-105 323
Msa1198050 MtrunA17_Chr6g0466841 36.786 473 276 8 46 510 4 461 7.53e-104 319
Msa1198050 MtrunA17_Chr2g0283041 31.798 456 290 15 66 514 16 457 2.38e-61 208
Msa1198050 MtrunA17_Chr4g0029131 30.110 455 293 11 65 511 20 457 5.75e-60 209
Msa1198050 MtrunA17_Chr4g0029131 24.138 261 167 6 2 238 391 644 8.39e-16 80.5
Msa1198050 MtrunA17_Chr4g0029151 29.011 455 298 11 65 511 28 465 3.46e-59 202
Msa1198050 MtrunA17_Chr1g0196851 28.855 454 303 9 65 511 57 497 9.22e-59 202
Msa1198050 MtrunA17_Chr2g0319761 31.223 458 287 14 65 511 16 456 4.74e-58 199
Msa1198050 MtrunA17_Chr4g0040691 30.342 468 286 17 65 515 16 460 5.44e-55 191
Msa1198050 MtrunA17_Chr4g0040711 30.263 456 292 16 65 510 16 455 1.72e-54 190
Msa1198050 MtrunA17_Chr3g0092031 46.632 193 99 1 314 506 3 191 1.72e-54 182
Msa1198050 MtrunA17_Chr6g0477011 35.034 294 175 4 65 354 24 305 4.56e-54 184
Msa1198050 MtrunA17_Chr2g0319801 30.719 459 290 15 67 514 18 459 1.00e-53 187
Msa1198050 MtrunA17_Chr2g0319751 27.116 579 339 18 1 509 366 931 1.15e-52 192
Msa1198050 MtrunA17_Chr2g0319751 28.319 452 280 14 65 509 16 430 5.17e-47 175
Msa1198050 MtrunA17_Chr2g0319731 30.349 458 293 14 67 514 35 476 2.10e-51 182
Msa1198050 MtrunA17_Chr5g0427571 35.855 304 181 6 224 515 1 302 2.20e-50 174
Msa1198050 MtrunA17_Chr2g0319791 29.268 451 297 14 67 509 18 454 1.70e-49 176
Msa1198050 MtrunA17_Chr4g0029161 27.692 455 276 12 65 511 20 429 2.26e-45 164
Msa1198050 MtrunA17_Chr4g0044511 28.033 478 292 16 67 512 50 507 3.02e-41 155
Msa1198050 MtrunA17_Chr6g0486251 28.665 457 260 14 66 488 15 439 4.98e-41 153
Msa1198050 MtrunA17_Chr6g0486201 28.665 457 260 14 66 488 15 439 4.98e-41 153
Msa1198050 MtrunA17_Chr6g0459311 28.256 453 267 12 66 488 22 446 6.94e-41 153
Msa1198050 MtrunA17_Chr8g0335161 28.667 450 275 13 66 490 15 443 3.25e-40 151
Msa1198050 MtrunA17_Chr7g0232411 35.798 257 145 5 265 505 206 458 1.77e-39 149
Msa1198050 MtrunA17_Chr8g0335141 27.273 473 299 10 66 514 18 469 1.20e-38 147
Msa1198050 MtrunA17_Chr7g0232401 37.113 194 112 1 316 499 260 453 1.55e-37 144
Msa1198050 MtrunA17_Chr7g0232391 35.193 233 137 3 290 512 236 464 1.34e-36 141
Msa1198050 MtrunA17_Chr8g0336691 26.087 529 336 14 19 509 864 1375 2.02e-36 144
Msa1198050 MtrunA17_Chr8g0336691 35.909 220 129 3 291 499 241 459 1.71e-33 135
Msa1198050 MtrunA17_Chr8g0336691 23.092 524 336 13 6 499 412 898 1.73e-27 117
Msa1198050 MtrunA17_Chr8g0336731 35.000 260 149 5 265 509 232 486 1.26e-35 139
Msa1198050 MtrunA17_Chr1g0153461 35.577 208 124 1 317 514 6 213 4.19e-35 130
Msa1198050 MtrunA17_Chr8g0336651 35.000 260 149 5 265 509 206 460 5.14e-35 140
Msa1198050 MtrunA17_Chr8g0336651 26.542 535 334 16 6 499 713 1229 2.21e-33 135
Msa1198050 MtrunA17_Chr8g0336651 34.426 183 99 1 317 499 599 760 4.91e-26 112
Msa1198050 MtrunA17_Chr7g0275511 28.256 453 273 14 66 490 24 452 6.69e-35 136
Msa1198050 MtrunA17_Chr8g0361371 26.258 457 278 16 66 489 16 446 1.41e-34 135
Msa1198050 MtrunA17_Chr7g0265101 27.176 471 302 14 52 491 4 464 1.50e-34 136
Msa1198050 MtrunA17_Chr1g0179901 26.739 460 288 14 67 491 26 471 2.41e-34 135
Msa1198050 MtrunA17_Chr8g0347281 32.911 237 145 4 274 499 225 458 3.17e-34 134
Msa1198050 MtrunA17_Chr7g0265051 26.160 474 301 14 52 491 4 462 3.45e-34 135
Msa1198050 MtrunA17_Chr8g0336741 36.139 202 120 1 317 509 266 467 4.11e-34 134
Msa1198050 MtrunA17_Chr8g0347271 25.885 452 297 12 66 499 28 459 4.88e-34 134
Msa1198050 MtrunA17_Chr5g0427581 40.278 144 84 1 65 206 6 149 2.51e-33 124
Msa1198050 MtrunA17_Chr8g0339601 33.333 288 154 9 220 490 41 307 4.25e-33 128
Msa1198050 MtrunA17_Chr3g0092021 36.527 167 94 3 65 230 26 181 4.35e-33 124
Msa1198050 MtrunA17_Chr5g0440421 29.213 445 272 16 67 479 20 453 4.72e-33 131
Msa1198050 MtrunA17_Chr7g0265141 29.803 406 249 12 59 442 11 402 6.54e-33 131
Msa1198050 MtrunA17_Chr2g0329111 26.562 448 300 12 67 494 16 454 8.50e-33 130
Msa1198050 MtrunA17_Chr8g0339451 35.909 220 127 3 284 490 222 440 1.00e-32 130
Msa1198050 MtrunA17_Chr4g0072761 37.430 179 102 4 312 490 261 429 2.98e-32 129
Msa1198050 MtrunA17_Chr7g0232341 32.627 236 144 4 290 514 236 467 3.06e-32 129
Msa1198050 MtrunA17_Chr1g0153451 35.751 193 114 1 317 499 257 449 4.48e-32 128
Msa1198050 MtrunA17_Chr8g0373301 32.061 262 162 3 265 514 210 467 8.48e-32 127
Msa1198050 MtrunA17_Chr8g0334831 25.325 462 284 14 66 489 15 453 1.27e-31 127
Msa1198050 MtrunA17_Chr8g0339441 37.234 188 105 1 316 490 219 406 1.44e-31 126
Msa1198050 MtrunA17_Chr8g0339461 34.247 219 130 3 285 490 231 448 1.64e-31 127
Msa1198050 MtrunA17_Chr6g0462531 28.000 450 274 18 67 489 14 440 2.64e-31 126
Msa1198050 MtrunA17_Chr7g0232331 31.780 236 148 4 290 515 236 468 4.20e-31 125
Msa1198050 MtrunA17_Chr8g0339631 32.900 231 142 3 295 514 241 469 4.45e-31 125
Msa1198050 MtrunA17_Chr4g0066221 27.340 406 238 15 67 442 21 399 1.18e-30 124
Msa1198050 MtrunA17_Chr3g0112771 25.974 462 295 13 67 513 22 451 1.75e-30 124
Msa1198050 MtrunA17_Chr2g0294921 25.434 519 324 17 4 491 112 598 1.91e-30 125
Msa1198050 MtrunA17_Chr4g0072771 34.359 195 117 4 312 505 274 458 3.03e-30 123
Msa1198050 MtrunA17_Chr5g0419771 25.870 460 291 14 67 491 46 490 4.10e-30 123
Msa1198050 MtrunA17_Chr8g0334861 33.202 253 147 7 264 499 202 449 4.31e-30 122
Msa1198050 MtrunA17_Chr8g0366391 25.052 483 302 12 67 511 19 479 4.88e-30 122
Msa1198050 MtrunA17_Chr6g0462571 36.111 180 112 3 312 489 259 437 5.42e-30 122
Msa1198050 MtrunA17_Chr7g0232311 26.503 449 283 12 66 490 15 440 6.38e-30 122
Msa1198050 MtrunA17_Chr8g0374941 26.500 400 248 13 67 442 21 398 6.94e-30 124
Msa1198050 MtrunA17_Chr8g0374941 25.505 396 257 11 67 442 959 1336 7.60e-30 124
Msa1198050 MtrunA17_Chr8g0374941 25.823 395 257 11 67 442 486 863 2.73e-25 110
Msa1198050 MtrunA17_Chr8g0369341 25.738 474 301 16 67 510 17 469 7.27e-30 122
Msa1198050 MtrunA17_Chr6g0449931 32.227 211 131 3 316 514 258 468 8.22e-30 122
Msa1198050 MtrunA17_Chr4g0066151 25.339 442 264 14 67 473 28 438 1.41e-29 121
Msa1198050 MtrunA17_Chr5g0403641 33.735 249 137 5 265 489 234 478 1.59e-29 121
Msa1198050 MtrunA17_Chr6g0462541 37.097 186 110 4 306 489 259 439 3.16e-29 120
Msa1198050 MtrunA17_Chr6g0462521 26.846 447 269 15 67 489 14 426 3.21e-29 120
Msa1198050 MtrunA17_Chr6g0464881 26.726 449 272 17 65 491 19 432 5.17e-29 119
Msa1198050 MtrunA17_Chr6g0462551 36.022 186 114 4 307 489 257 440 6.03e-29 119
Msa1198050 MtrunA17_Chr5g0409591 30.612 245 141 5 261 477 207 450 8.32e-29 119
Msa1198050 MtrunA17_Chr7g0265041 26.942 412 242 13 67 444 21 407 9.04e-29 119
Msa1198050 MtrunA17_Chr5g0419761 26.392 413 268 14 52 442 4 402 1.19e-28 119
Msa1198050 MtrunA17_Chr5g0414321 32.558 215 130 5 309 515 250 457 1.36e-28 118
Msa1198050 MtrunA17_Chr4g0066131 25.901 444 269 15 67 488 23 428 1.61e-28 118
Msa1198050 MtrunA17_Chr2g0307961 24.781 456 294 13 49 485 5 430 1.92e-28 118
Msa1198050 MtrunA17_Chr2g0321331 27.124 306 170 6 216 515 11 269 3.00e-28 113
Msa1198050 MtrunA17_Chr7g0232351 38.286 175 96 3 265 428 206 379 3.07e-28 115
Msa1198050 MtrunA17_Chr8g0334851 34.973 183 109 2 317 489 263 445 3.50e-28 117
Msa1198050 MtrunA17_Chr5g0410941 26.218 431 278 13 33 444 1 410 3.51e-28 117
Msa1198050 MtrunA17_Chr2g0302991 27.990 418 256 15 65 459 13 408 4.84e-28 116
Msa1198050 MtrunA17_Chr5g0414331 30.622 209 130 4 309 509 252 453 5.80e-28 116
Msa1198050 MtrunA17_Chr3g0079731 35.500 200 111 5 309 491 260 458 1.38e-27 115
Msa1198050 MtrunA17_Chr2g0278711 25.333 450 297 13 57 482 11 445 1.52e-27 115
Msa1198050 MtrunA17_Chr6g0464871 33.061 245 141 9 259 491 211 444 1.71e-27 115
Msa1198050 MtrunA17_Chr7g0249931 28.501 407 241 16 54 442 37 411 1.94e-27 115
Msa1198050 MtrunA17_Chr7g0218831 26.739 460 273 19 67 505 16 432 2.88e-27 114
Msa1198050 MtrunA17_Chr7g0265111 41.304 138 79 1 305 440 294 431 3.40e-27 115
Msa1198050 MtrunA17_Chr3g0092641 27.500 400 251 13 67 440 22 408 3.90e-27 114
Msa1198050 MtrunA17_Chr8g0374901 25.441 397 254 12 67 442 22 397 3.92e-27 114
Msa1198050 MtrunA17_Chr6g0463851 23.395 483 317 14 67 515 21 484 4.20e-27 114
Msa1198050 MtrunA17_Chr2g0302961 26.253 419 263 13 65 458 13 410 4.72e-27 114
Msa1198050 MtrunA17_Chr6g0463861 24.161 447 287 15 67 486 21 442 8.97e-27 113
Msa1198050 MtrunA17_Chr8g0370941 33.617 235 126 7 283 489 232 464 9.25e-27 113
Msa1198050 MtrunA17_Chr5g0420801 25.707 389 264 11 67 444 17 391 1.05e-26 112
Msa1198050 MtrunA17_Chr6g0454301 27.473 455 277 19 67 489 273 706 1.16e-26 114
Msa1198050 MtrunA17_Chr6g0454301 32.121 165 101 4 296 455 22 180 3.50e-16 81.6
Msa1198050 MtrunA17_Chr4g0044481 28.715 397 222 12 67 444 37 391 1.19e-26 112
Msa1198050 MtrunA17_Chr4g0014061 26.290 407 239 13 67 444 19 393 1.22e-26 112
Msa1198050 MtrunA17_Chr5g0426431 26.039 457 288 15 67 494 22 457 1.37e-26 112
Msa1198050 MtrunA17_Chr7g0275681 28.283 396 249 11 67 444 22 400 1.93e-26 112
Msa1198050 MtrunA17_Chr5g0401721 28.625 269 166 6 261 509 208 470 2.11e-26 112
Msa1198050 MtrunA17_Chr3g0098111 26.316 475 300 17 67 512 19 472 3.18e-26 111
Msa1198050 MtrunA17_Chr1g0159551 34.426 183 113 3 316 491 255 437 5.18e-26 110
Msa1198050 MtrunA17_Chr6g0464841 35.593 177 104 5 316 491 265 432 5.18e-26 110
Msa1198050 MtrunA17_Chr6g0464861 32.099 243 142 8 261 491 200 431 5.68e-26 110
Msa1198050 MtrunA17_Chr4g0044501 25.926 459 269 18 68 486 21 448 6.53e-26 110
Msa1198050 MtrunA17_Chr8g0382021 34.409 186 110 4 316 490 281 465 6.56e-26 110
Msa1198050 MtrunA17_Chr7g0250001 26.667 450 293 11 56 494 5 428 8.83e-26 110
Msa1198050 MtrunA17_Chr7g0265151 24.709 429 261 12 50 444 2 402 1.20e-25 110
Msa1198050 MtrunA17_Chr4g0044521 26.098 387 256 12 67 442 19 386 2.19e-25 108
Msa1198050 MtrunA17_Chr1g0207981 31.818 198 128 3 316 509 278 472 2.23e-25 108
Msa1198050 MtrunA17_Chr5g0431441 25.450 444 284 17 67 491 28 443 2.52e-25 108
Msa1198050 MtrunA17_Chr3g0112761 33.889 180 113 4 312 490 252 426 3.66e-25 108
Msa1198050 MtrunA17_Chr7g0218841 25.813 461 277 18 67 505 16 433 3.98e-25 107
Msa1198050 MtrunA17_Chr5g0442511 30.877 285 158 12 261 515 224 499 5.29e-25 108
Msa1198050 MtrunA17_Chr1g0173121 33.871 186 108 3 316 490 258 439 5.29e-25 107
Msa1198050 MtrunA17_Chr5g0448521 34.783 207 108 8 303 490 246 444 5.61e-25 107
Msa1198050 MtrunA17_Chr8g0380531 32.161 199 130 3 317 515 266 459 6.05e-25 107
Msa1198050 MtrunA17_Chr5g0442521 35.714 196 104 6 314 490 260 452 7.27e-25 107
Msa1198050 MtrunA17_Chr8g0374971 23.963 434 287 13 67 473 22 439 7.46e-25 107
Msa1198050 MtrunA17_Chr3g0078841 25.277 451 292 14 67 489 20 453 7.50e-25 107
Msa1198050 MtrunA17_Chr7g0218811 25.581 430 285 13 67 488 25 427 7.74e-25 107
Msa1198050 MtrunA17_Chr8g0336331 26.164 451 287 14 67 489 20 452 8.32e-25 107
Msa1198050 MtrunA17_Chr7g0249981 27.727 440 279 15 67 494 35 447 1.71e-24 106
Msa1198050 MtrunA17_Chr4g0011051 25.536 466 287 16 67 491 19 465 1.78e-24 106
Msa1198050 MtrunA17_Chr8g0359821 25.602 457 283 18 67 489 20 453 2.19e-24 106
Msa1198050 MtrunA17_Chr1g0207951 33.019 212 127 5 303 510 371 571 2.84e-24 107
Msa1198050 MtrunA17_Chr1g0207951 28.516 256 152 9 274 512 870 1111 1.68e-23 105
Msa1198050 MtrunA17_Chr8g0365811 24.498 498 314 15 56 515 8 481 3.00e-24 107
Msa1198050 MtrunA17_Chr8g0365811 30.045 223 143 7 303 515 744 963 8.29e-22 99.8
Msa1198050 MtrunA17_Chr5g0442541 26.819 481 284 18 67 509 15 465 5.26e-24 104
Msa1198050 MtrunA17_Chr7g0235051 25.823 395 235 10 65 442 19 372 5.33e-24 104
Msa1198050 MtrunA17_Chr1g0207931 29.921 254 155 8 274 510 251 498 7.04e-24 104
Msa1198050 MtrunA17_Chr6g0464921 24.889 450 276 14 67 491 21 433 1.23e-23 103
Msa1198050 MtrunA17_Chr7g0249961 35.556 180 106 4 316 494 70 240 1.39e-23 100
Msa1198050 MtrunA17_Chr3g0118701 24.558 452 294 16 67 489 25 458 1.54e-23 103
Msa1198050 MtrunA17_Chr5g0431361 23.605 466 303 16 67 511 22 455 3.26e-23 102
Msa1198050 MtrunA17_Chr5g0442561 26.434 488 292 19 67 513 15 476 3.44e-23 102
Msa1198050 MtrunA17_Chr6g0454151 32.338 201 117 5 296 489 265 453 3.85e-23 102
Msa1198050 MtrunA17_Chr1g0207861 25.485 412 237 12 67 442 18 395 4.27e-23 102
Msa1198050 MtrunA17_Chr4g0032331 23.853 436 293 12 67 489 18 427 4.99e-23 101
Msa1198050 MtrunA17_Chr3g0122001 30.894 246 146 7 266 491 210 451 5.01e-23 103
Msa1198050 MtrunA17_Chr3g0122001 29.098 244 150 7 267 491 691 930 4.14e-20 94.4
Msa1198050 MtrunA17_Chr4g0053321 31.500 200 133 3 317 513 281 479 6.01e-23 102
Msa1198050 MtrunA17_Chr6g0453961 24.503 453 296 15 67 489 29 465 6.57e-23 101
Msa1198050 MtrunA17_Chr6g0454191 24.561 456 292 15 67 489 20 456 7.96e-23 101
Msa1198050 MtrunA17_Chr4g0053501 33.146 178 115 3 317 491 266 442 9.81e-23 101
Msa1198050 MtrunA17_Chr7g0243631 24.649 499 295 19 67 514 23 491 1.08e-22 101
Msa1198050 MtrunA17_Chr5g0442491 31.982 222 126 7 314 513 260 478 1.16e-22 100
Msa1198050 MtrunA17_Chr4g0066261 32.164 171 102 4 317 473 270 440 1.18e-22 100
Msa1198050 MtrunA17_Chr6g0454141 25.328 458 289 18 67 491 20 457 1.49e-22 100
Msa1198050 MtrunA17_Chr5g0442601 27.027 370 224 13 175 514 527 880 1.62e-22 101
Msa1198050 MtrunA17_Chr5g0442601 37.500 136 74 2 314 439 188 322 8.48e-16 80.9
Msa1198050 MtrunA17_Chr6g0454131 32.500 200 119 6 293 489 268 454 1.87e-22 100
Msa1198050 MtrunA17_Chr5g0393591 37.086 151 86 2 316 466 256 397 2.11e-22 100
Msa1198050 MtrunA17_Chr3g0118671 26.887 424 257 18 53 442 2 406 2.66e-22 99.8
Msa1198050 MtrunA17_Chr7g0243871 25.205 488 324 16 50 511 2 474 3.36e-22 99.8
Msa1198050 MtrunA17_Chr6g0453951 31.313 198 124 5 293 489 316 502 4.05e-22 99.8
Msa1198050 MtrunA17_Chr3g0118691 25.658 456 284 19 67 489 25 458 4.13e-22 99.4
Msa1198050 MtrunA17_Chr7g0217881 24.886 438 294 13 67 489 20 437 4.20e-22 99.4
Msa1198050 MtrunA17_Chr7g0218821 26.282 468 285 19 67 509 15 447 4.41e-22 99.0
Msa1198050 MtrunA17_Chr5g0426401 31.472 197 122 6 296 491 103 287 5.76e-22 96.7
Msa1198050 MtrunA17_Chr1g0161351 26.415 424 242 13 55 442 35 424 6.17e-22 99.0
Msa1198050 MtrunA17_Chr6g0454321 24.516 465 282 15 67 491 20 455 7.16e-22 99.4
Msa1198050 MtrunA17_Chr5g0429681 25.962 416 265 17 66 459 53 447 8.79e-22 98.6
Msa1198050 MtrunA17_Chr8g0377921 34.637 179 109 4 316 491 268 441 1.13e-21 97.8
Msa1198050 MtrunA17_Chr1g0207971 31.455 213 130 7 303 510 253 454 1.17e-21 97.8
Msa1198050 MtrunA17_Chr6g0454221 31.443 194 123 5 296 489 23 206 1.38e-21 95.5
Msa1198050 MtrunA17_Chr6g0452771 32.571 175 109 4 316 489 289 455 1.46e-21 97.8
Msa1198050 MtrunA17_Chr7g0243681 25.101 494 294 19 67 514 21 484 1.58e-21 97.8
Msa1198050 MtrunA17_Chr4g0050341 26.044 407 252 14 67 439 29 420 1.70e-21 97.4
Msa1198050 MtrunA17_Chr6g0454341 24.565 460 284 17 67 489 20 453 1.73e-21 97.4
Msa1198050 MtrunA17_Chr3g0118661 25.248 404 260 12 67 442 23 412 2.35e-21 97.1
Msa1198050 MtrunA17_Chr4g0066171 34.899 149 90 3 312 455 263 409 2.50e-21 97.1
Msa1198050 MtrunA17_Chr5g0431371 23.340 467 300 18 67 511 20 450 2.90e-21 96.7
Msa1198050 MtrunA17_Chr5g0442581 31.325 249 144 8 283 509 233 476 3.05e-21 97.1
Msa1198050 MtrunA17_Chr2g0294941 30.994 171 104 3 317 473 168 338 3.11e-21 95.5
Msa1198050 MtrunA17_Chr4g0042891 42.748 131 72 2 316 443 266 396 3.11e-21 96.7
Msa1198050 MtrunA17_Chr6g0454401 23.593 462 289 16 67 489 20 456 3.88e-21 96.3
Msa1198050 MtrunA17_Chr3g0121991 31.148 183 116 3 316 491 344 523 5.41e-21 96.3
Msa1198050 MtrunA17_Chr5g0412131 39.062 128 74 2 317 444 282 405 5.59e-21 95.9
Msa1198050 MtrunA17_Chr6g0454211 23.614 487 329 12 32 489 270 742 5.64e-21 96.7
Msa1198050 MtrunA17_Chr6g0454201 25.055 455 290 15 67 489 21 456 6.00e-21 95.9
Msa1198050 MtrunA17_Chr3g0106251 26.415 265 159 10 243 491 27 271 6.15e-21 93.6
Msa1198050 MtrunA17_Chr3g0079711 34.756 164 94 5 341 491 3 166 7.02e-21 90.5
Msa1198050 MtrunA17_Chr5g0448551 35.119 168 96 5 283 444 225 385 7.72e-21 95.1
Msa1198050 MtrunA17_Chr5g0412111 36.719 128 77 2 317 444 274 397 1.41e-20 94.7
Msa1198050 MtrunA17_Chr4g0042931 40.299 134 76 2 314 443 261 394 1.96e-20 94.0
Msa1198050 MtrunA17_Chr3g0118711 24.431 483 294 18 48 489 4 456 2.01e-20 94.4
Msa1198050 MtrunA17_Chr5g0423981 32.571 175 109 4 316 489 254 420 2.23e-20 94.0
Msa1198050 MtrunA17_Chr3g0118771 26.185 443 239 23 67 455 31 439 2.85e-20 94.0
Msa1198050 MtrunA17_Chr6g0454271 30.303 198 126 5 293 489 76 262 2.96e-20 91.3
Msa1198050 MtrunA17_Chr6g0454121 30.857 175 112 4 316 489 288 454 3.54e-20 93.6
Msa1198050 MtrunA17_Chr5g0431401 24.503 302 173 9 229 489 137 424 4.02e-20 93.2
Msa1198050 MtrunA17_Chr4g0066201 35.417 144 86 3 317 455 266 407 4.08e-20 93.2
Msa1198050 MtrunA17_Chr5g0412101 37.500 128 76 2 317 444 283 406 6.63e-20 92.4
Msa1198050 MtrunA17_Chr6g0454291 24.890 454 292 15 67 489 17 452 6.71e-20 92.4
Msa1198050 MtrunA17_Chr3g0106231 24.605 443 275 16 67 491 28 429 7.39e-20 92.4
Msa1198050 MtrunA17_Chr5g0432731 28.279 244 153 8 261 494 46 277 7.62e-20 90.1
Msa1198050 MtrunA17_Chr5g0431421 23.690 439 285 16 67 489 20 424 7.81e-20 92.0
Msa1198050 MtrunA17_Chr6g0454331 30.288 208 131 6 283 489 260 454 8.28e-20 92.4
Msa1198050 MtrunA17_Chr8g0361411 24.365 394 254 14 67 442 18 385 1.41e-19 91.3
Msa1198050 MtrunA17_Chr7g0243931 24.433 397 265 12 67 442 27 409 1.51e-19 91.7
Msa1198050 MtrunA17_Chr6g0454181 30.653 199 127 5 294 489 265 455 1.56e-19 91.7
Msa1198050 MtrunA17_Chr8g0377941 24.161 447 293 14 67 491 17 439 1.57e-19 91.3
Msa1198050 MtrunA17_Chr7g0218791 33.537 164 100 4 316 478 259 414 2.74e-19 90.5
Msa1198050 MtrunA17_Chr4g0066281 35.606 132 79 2 317 444 258 387 2.79e-19 90.5
Msa1198050 MtrunA17_Chr7g0243861 24.439 401 260 12 67 442 24 406 4.42e-19 90.1
Msa1198050 MtrunA17_Chr5g0431431 29.255 188 119 2 261 446 150 325 5.34e-19 88.6
Msa1198050 MtrunA17_Chr7g0243761 30.890 191 127 4 305 491 265 454 6.12e-19 89.7
Msa1198050 MtrunA17_Chr6g0454361 29.808 208 132 6 283 489 262 456 6.76e-19 89.4
Msa1198050 MtrunA17_Chr5g0429711 30.688 189 111 8 314 494 266 442 9.29e-19 89.0
Msa1198050 MtrunA17_Chr6g0454261 29.082 196 130 5 296 489 267 455 1.14e-18 89.0
Msa1198050 MtrunA17_Chr1g0207831 30.137 219 132 7 303 512 260 466 1.23e-18 88.6
Msa1198050 MtrunA17_Chr6g0482061 33.813 139 89 1 308 443 272 410 1.35e-18 88.6
Msa1198050 MtrunA17_Chr2g0294931 32.609 184 107 5 317 486 270 450 1.60e-18 88.6
Msa1198050 MtrunA17_Chr7g0243801 29.954 217 132 7 312 511 265 478 2.70e-18 87.8
Msa1198050 MtrunA17_Chr7g0243771 36.842 133 80 2 312 442 264 394 3.37e-18 87.4
Msa1198050 MtrunA17_Chr7g0243811 36.364 132 72 2 317 442 242 367 3.83e-18 86.7
Msa1198050 MtrunA17_Chr6g0454251 25.000 404 234 15 67 427 17 394 4.27e-18 86.3
Msa1198050 MtrunA17_Chr6g0454171 25.781 256 151 8 248 489 55 285 6.26e-18 84.7
Msa1198050 MtrunA17_Chr7g0218311 37.037 135 80 2 317 446 272 406 9.10e-18 86.3
Msa1198050 MtrunA17_Chr3g0118721 34.375 128 78 3 317 442 99 222 1.00e-17 84.0
Msa1198050 MtrunA17_Chr8g0374931 30.994 171 104 4 317 473 270 440 1.12e-17 85.9
Msa1198050 MtrunA17_Chr8g0355221 36.232 138 85 2 307 442 270 406 1.43e-17 85.5
Msa1198050 MtrunA17_Chr7g0243951 22.922 397 270 11 67 442 21 402 1.52e-17 85.5
Msa1198050 MtrunA17_Chr7g0243611 35.156 128 79 2 317 442 138 263 1.78e-17 83.2
Msa1198050 MtrunA17_Chr5g0401851 32.836 201 122 6 299 488 260 458 2.57e-17 84.7
Msa1198050 MtrunA17_Chr7g0243781 29.570 186 115 6 317 488 267 450 2.97e-17 84.3
Msa1198050 MtrunA17_Chr4g0060511 33.974 156 96 4 317 467 281 434 8.64e-17 83.2
Msa1198050 MtrunA17_Chr8g0350881 36.364 132 78 2 317 442 268 399 1.87e-16 82.0
Msa1198050 MtrunA17_Chr5g0428081 28.505 214 138 4 317 515 268 481 3.18e-16 81.3
Msa1198050 MtrunA17_Chr5g0416821 24.289 387 257 11 68 432 25 397 5.61e-16 80.5
Msa1198050 MtrunA17_Chr7g0243911 33.793 145 89 4 317 457 24 165 7.26e-16 77.0
Msa1198050 MtrunA17_Chr1g0165701 22.697 445 277 15 68 473 26 442 1.12e-15 79.7
Msa1198050 MtrunA17_Chr8g0355011 29.341 167 109 4 324 489 179 337 1.42e-15 78.6
Msa1198050 MtrunA17_Chr7g0243851 25.815 399 219 14 65 442 19 361 2.99e-15 78.2
Msa1198050 MtrunA17_Chr7g0243711 34.375 128 80 2 317 442 110 235 3.58e-15 76.6
Msa1198050 MtrunA17_Chr2g0321321 33.588 131 82 4 67 196 8 134 4.67e-14 69.3
Msa1198050 MtrunA17_Chr6g0463891 31.016 187 111 5 316 487 278 461 1.43e-13 73.2
Msa1198050 MtrunA17_Chr2g0319721 30.370 135 90 3 67 200 8 139 1.81e-13 68.9
Msa1198050 MtrunA17_Chr8g0357361 31.008 129 85 2 316 444 119 243 2.17e-13 70.5
Msa1198050 MtrunA17_Chr6g0454351 27.215 158 98 4 338 490 296 441 6.50e-13 70.9
Msa1198050 MtrunA17_Chr5g0416741 33.333 168 99 5 316 473 278 442 1.22e-12 70.1
Msa1198050 MtrunA17_Chr7g0250021 26.225 347 210 14 54 383 9 326 1.52e-12 68.9
Msa1198050 MtrunA17_Chr8g0336261 33.645 107 66 3 336 442 2 103 6.09e-12 63.2
Msa1198050 MtrunA17_Chr7g0231631 28.571 182 116 3 262 432 5 183 6.22e-12 66.2
Msa1198050 MtrunA17_Chr8g0337381 30.088 113 77 1 387 499 1 111 1.48e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1198050 AT2G22590.1 50.111 449 215 4 65 509 23 466 1.24e-163 472
Msa1198050 AT2G22590.1 58.462 65 27 0 1 65 404 468 3.32e-17 84.7
Msa1198050 AT5G49690.1 44.690 452 231 4 65 512 18 454 6.26e-140 412
Msa1198050 AT5G49690.1 50.746 67 33 0 1 67 389 455 4.11e-11 65.5
Msa1198050 AT5G65550.1 43.681 451 244 5 65 511 17 461 7.36e-130 386
Msa1198050 AT1G64910.1 32.018 456 271 15 65 511 14 439 1.66e-59 203
Msa1198050 AT3G29630.1 32.308 455 276 13 66 513 15 444 2.67e-58 200
Msa1198050 AT5G54010.1 29.688 448 294 9 66 510 15 444 2.71e-56 195
Msa1198050 AT3G29630.2 31.567 453 256 14 66 513 15 418 2.83e-54 189
Msa1198050 AT5G53990.1 29.333 450 291 10 65 511 14 439 3.27e-54 189
Msa1198050 AT5G54060.1 30.217 460 296 13 65 511 21 468 7.70e-52 183
Msa1198050 AT2G22930.1 29.412 459 283 13 65 513 14 441 8.22e-52 182
Msa1198050 AT4G27560.1 29.581 453 285 12 67 510 17 444 2.43e-48 173
Msa1198050 AT1G64920.1 28.132 455 294 10 65 511 14 443 5.28e-47 170
Msa1198050 AT4G27570.1 29.139 453 287 12 67 510 17 444 8.02e-47 169
Msa1198050 AT4G09500.2 28.603 458 288 13 65 513 14 441 1.24e-46 169
Msa1198050 AT1G50580.1 29.295 454 283 12 66 510 15 439 9.06e-45 164
Msa1198050 AT1G01420.2 29.114 474 288 15 66 514 20 470 3.06e-42 157
Msa1198050 AT1G01420.1 29.114 474 288 15 66 514 17 467 3.28e-42 157
Msa1198050 AT4G09500.1 27.511 458 268 13 65 513 14 416 1.38e-41 154
Msa1198050 AT4G01070.1 27.974 454 290 12 66 499 17 453 7.81e-38 145
Msa1198050 AT4G34131.1 27.669 459 282 15 65 491 18 458 9.75e-38 145
Msa1198050 AT2G15480.1 26.360 478 306 14 67 512 20 483 4.26e-37 143
Msa1198050 AT2G15490.1 27.313 454 289 12 67 491 17 458 9.55e-37 142
Msa1198050 AT2G15480.2 27.543 403 248 9 67 442 20 405 1.44e-36 142
Msa1198050 AT5G12890.1 27.778 450 288 15 67 491 20 457 1.51e-36 142
Msa1198050 AT2G15490.3 27.212 452 289 12 67 491 17 455 2.26e-36 141
Msa1198050 AT3G53150.1 27.602 442 258 16 42 444 1 419 2.42e-36 141
Msa1198050 AT4G34138.1 27.621 496 284 17 59 509 13 478 3.37e-35 138
Msa1198050 AT5G17050.1 30.657 274 170 8 243 509 196 456 3.26e-34 134
Msa1198050 AT1G51210.1 27.059 425 252 14 51 452 9 398 8.18e-34 133
Msa1198050 AT2G36800.1 27.500 400 254 12 67 444 22 407 1.31e-33 133
Msa1198050 AT3G50740.1 32.283 254 147 6 258 490 200 449 6.52e-33 131
Msa1198050 AT2G18560.1 37.788 217 121 4 283 489 140 352 7.12e-33 129
Msa1198050 AT3G46670.1 26.304 441 274 14 67 490 19 425 2.12e-32 129
Msa1198050 AT2G36780.1 25.954 393 264 8 67 442 24 406 6.82e-32 129
Msa1198050 AT5G03490.1 28.319 452 262 17 57 487 14 424 7.91e-32 128
Msa1198050 AT1G01390.2 27.489 462 282 14 66 499 34 470 9.93e-32 128
Msa1198050 AT1G01390.1 27.489 462 282 14 66 499 17 453 1.30e-31 127
Msa1198050 AT4G34135.1 26.588 425 266 11 47 444 1 406 1.54e-31 127
Msa1198050 AT2G18570.1 36.530 219 125 5 281 489 228 442 5.15e-31 125
Msa1198050 AT5G66690.1 30.894 246 145 4 265 490 202 442 9.52e-31 125
Msa1198050 AT5G26310.1 30.894 246 145 5 265 490 202 442 9.79e-31 125
Msa1198050 AT5G59590.1 24.276 449 307 10 50 490 3 426 1.07e-30 124
Msa1198050 AT5G14860.1 27.869 488 284 18 67 512 18 479 1.11e-30 125
Msa1198050 AT2G36750.1 26.396 394 258 9 67 441 20 400 2.05e-30 124
Msa1198050 AT4G36770.1 37.089 213 114 5 290 489 234 439 3.35e-30 123
Msa1198050 AT5G59580.1 23.581 458 308 13 67 510 19 448 6.88e-30 122
Msa1198050 AT3G02100.1 25.664 452 288 14 67 499 23 445 7.05e-30 122
Msa1198050 AT5G17030.1 30.952 252 160 6 243 491 193 433 7.61e-30 122
Msa1198050 AT5G05880.1 24.619 459 306 12 67 511 18 450 7.91e-30 122
Msa1198050 AT5G17040.2 30.952 252 160 6 243 491 75 315 1.03e-29 119
Msa1198050 AT3G53160.1 25.272 459 293 14 67 491 18 460 1.83e-29 121
Msa1198050 AT2G36770.1 26.238 404 249 11 67 442 24 406 2.26e-29 121
Msa1198050 AT5G17040.1 30.952 252 160 6 243 491 177 417 2.26e-29 120
Msa1198050 AT2G36760.1 25.307 407 249 12 67 442 24 406 1.20e-28 119
Msa1198050 AT1G07250.1 33.191 235 139 7 267 490 222 449 2.42e-28 118
Msa1198050 AT2G23250.1 27.335 439 268 16 67 489 8 411 4.60e-28 117
Msa1198050 AT3G46700.1 30.233 258 166 5 262 514 197 445 4.92e-28 117
Msa1198050 AT2G23260.1 28.037 428 251 15 67 472 20 412 1.66e-27 115
Msa1198050 AT1G73880.1 26.005 423 267 14 67 467 24 422 1.68e-27 115
Msa1198050 AT1G10400.1 26.013 469 298 20 67 509 17 462 1.99e-27 115
Msa1198050 AT1G22380.1 27.111 450 288 14 67 491 23 457 2.04e-27 115
Msa1198050 AT1G30530.1 29.289 239 154 5 254 490 202 427 4.96e-27 114
Msa1198050 AT2G16890.2 27.253 455 272 21 67 491 19 444 6.95e-27 114
Msa1198050 AT1G22400.1 26.580 459 280 16 67 491 23 458 7.50e-27 114
Msa1198050 AT2G29730.1 36.216 185 102 5 314 491 265 440 1.17e-26 113
Msa1198050 AT2G36790.1 25.871 402 253 8 67 442 23 405 2.91e-26 112
Msa1198050 AT5G05900.1 25.455 440 279 15 67 490 18 424 3.83e-26 111
Msa1198050 AT2G26480.1 25.287 435 268 17 67 482 18 414 4.46e-26 111
Msa1198050 AT5G05890.1 22.366 465 313 13 67 511 18 454 4.47e-26 111
Msa1198050 AT1G78270.1 24.779 452 296 13 67 491 23 457 4.77e-26 111
Msa1198050 AT2G43820.1 29.323 266 165 7 262 514 192 447 4.89e-26 111
Msa1198050 AT3G16520.2 36.170 188 112 5 282 464 228 412 4.98e-26 110
Msa1198050 AT3G16520.1 33.953 215 135 5 282 491 228 440 5.54e-26 110
Msa1198050 AT3G16520.3 33.953 215 135 5 282 491 228 440 6.57e-26 110
Msa1198050 AT3G46660.1 25.000 436 288 13 67 490 24 432 8.15e-26 110
Msa1198050 AT1G22360.1 25.910 467 272 17 67 491 20 454 8.59e-26 110
Msa1198050 AT2G31750.1 24.330 448 283 12 67 491 18 432 1.02e-25 110
Msa1198050 AT2G29710.1 24.779 452 291 15 65 491 13 440 1.03e-25 110
Msa1198050 AT3G46650.1 24.651 430 278 13 67 490 20 409 1.39e-25 109
Msa1198050 AT1G05680.1 25.893 448 276 14 67 491 16 430 1.66e-25 109
Msa1198050 AT2G36970.1 31.466 232 147 7 261 489 224 446 1.85e-25 109
Msa1198050 AT2G31750.2 24.330 448 283 12 67 491 18 432 2.11e-25 109
Msa1198050 AT5G05870.1 28.346 254 161 8 267 509 211 454 4.76e-25 108
Msa1198050 AT2G43840.2 32.000 200 127 3 316 514 256 447 7.15e-25 107
Msa1198050 AT2G43840.1 32.000 200 127 3 316 514 256 447 7.42e-25 107
Msa1198050 AT2G28080.1 25.885 452 273 19 67 489 28 446 7.56e-25 107
Msa1198050 AT1G07260.1 30.932 236 144 7 267 490 220 448 1.18e-24 107
Msa1198050 AT1G24100.1 31.658 199 124 4 316 509 267 458 1.27e-24 107
Msa1198050 AT3G46680.1 24.201 438 286 15 68 490 20 426 1.43e-24 106
Msa1198050 AT2G31790.1 30.400 250 151 6 256 491 194 434 1.58e-24 106
Msa1198050 AT5G38010.1 23.128 454 286 15 50 478 3 418 2.13e-24 106
Msa1198050 AT3G55700.1 32.000 200 127 5 316 511 258 452 3.50e-24 105
Msa1198050 AT5G38040.1 24.236 458 305 17 67 511 20 448 5.36e-24 105
Msa1198050 AT1G05675.1 32.955 176 111 2 316 491 262 430 1.14e-23 104
Msa1198050 AT1G22360.2 25.541 462 268 17 67 491 20 442 1.75e-23 103
Msa1198050 AT2G16890.3 27.685 419 248 20 67 459 19 408 1.92e-23 103
Msa1198050 AT2G29750.1 30.516 213 141 5 267 473 225 436 4.65e-23 102
Msa1198050 AT1G07240.1 31.405 242 152 8 243 473 199 437 5.25e-23 102
Msa1198050 AT2G29740.1 32.597 181 115 4 314 490 274 451 5.52e-23 102
Msa1198050 AT4G15280.2 30.709 254 148 9 258 490 236 482 6.18e-23 102
Msa1198050 AT4G15280.1 30.709 254 148 9 258 490 204 450 7.69e-23 102
Msa1198050 AT1G05560.2 29.339 242 156 6 267 498 250 486 1.08e-22 101
Msa1198050 AT3G55710.1 31.188 202 130 4 314 511 260 456 1.15e-22 101
Msa1198050 AT1G05560.1 29.339 242 156 6 267 498 200 436 1.18e-22 101
Msa1198050 AT1G22370.2 27.387 398 250 15 67 440 23 405 1.88e-22 100
Msa1198050 AT3G46690.1 29.389 262 171 5 253 509 193 445 2.63e-22 100
Msa1198050 AT3G11340.1 32.386 176 110 5 317 490 253 421 2.80e-22 100
Msa1198050 AT1G22340.1 23.758 463 305 14 67 501 23 465 5.72e-22 99.4
Msa1198050 AT4G15550.1 22.947 475 307 15 67 511 23 468 1.03e-21 98.6
Msa1198050 AT5G05860.1 23.543 446 279 15 67 490 19 424 1.09e-21 98.2
Msa1198050 AT3G21800.1 32.645 242 139 10 267 488 213 450 1.25e-21 98.2
Msa1198050 AT1G05530.1 24.130 460 286 15 67 498 15 439 1.61e-21 97.8
Msa1198050 AT3G21790.1 31.405 242 145 8 267 490 217 455 3.02e-21 97.1
Msa1198050 AT2G30150.1 24.490 441 284 17 67 491 7 414 3.21e-21 96.7
Msa1198050 AT2G30150.2 24.490 441 284 17 67 491 23 430 3.80e-21 96.7
Msa1198050 AT3G46720.1 31.169 231 141 6 287 514 226 441 5.06e-21 96.3
Msa1198050 AT3G21780.1 33.498 203 112 6 267 453 208 403 6.15e-21 96.3
Msa1198050 AT4G15260.1 28.926 242 149 7 267 490 95 331 1.13e-20 94.0
Msa1198050 AT4G15480.1 24.574 411 263 10 56 442 18 405 1.65e-20 95.1
Msa1198050 AT3G21760.1 30.385 260 151 10 254 490 205 457 2.82e-20 94.4
Msa1198050 AT3G21750.1 28.916 249 144 8 267 490 205 445 5.04e-19 90.1
Msa1198050 AT3G21560.1 29.557 203 132 5 316 512 278 475 8.04e-19 89.7
Msa1198050 AT2G30140.2 24.406 463 285 17 48 499 6 414 1.69e-18 88.6
Msa1198050 AT4G15490.1 24.000 475 285 16 54 489 5 442 4.11e-18 87.4
Msa1198050 AT4G14090.1 27.523 218 143 6 281 494 230 436 4.17e-18 87.4
Msa1198050 AT1G22370.1 37.600 125 75 2 316 440 114 235 4.24e-18 85.5
Msa1198050 AT5G37950.2 25.000 336 217 11 110 435 35 345 1.20e-17 84.7
Msa1198050 AT2G30140.1 27.966 236 137 6 266 499 211 415 3.41e-17 84.3
Msa1198050 AT4G15500.1 31.638 177 114 3 316 490 268 439 1.03e-16 83.2
Msa1198050 AT5G37950.1 32.258 186 110 7 258 435 174 351 1.39e-16 81.6
Msa1198050 AT1G06000.1 33.721 172 103 4 314 479 230 396 3.79e-16 81.3
Msa1198050 AT3G22250.1 34.091 132 72 5 317 442 276 398 5.35e-16 80.9
Msa1198050 AT4G01070.2 26.934 349 216 13 66 394 17 346 6.17e-15 76.6
Msa1198050 AT4G34135.2 24.854 342 222 12 47 365 1 330 1.76e-13 72.0

Find 136 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATATCTATCTTGTCTTTC+AGG 0.117260 8_1:+49360203 None:intergenic
GCTTGTCAAATGCATCTTTA+AGG 0.154050 8_1:+49358493 None:intergenic
AGTCAAATCTTCCATTCTTT+TGG 0.199725 8_1:-49357858 Msa1198050:CDS
GGGACCAATTTCGGTTCTTA+TGG 0.245788 8_1:-49358319 Msa1198050:CDS
TATGCCACTGTAGTCTTAAA+TGG 0.251690 8_1:+49358237 None:intergenic
GGGAGGCGTTGTATGTTTCT+TGG 0.252440 8_1:+49358636 None:intergenic
TCCACCAAATCTTGCCTTCT+TGG 0.252555 8_1:-49358340 Msa1198050:CDS
GCAACGTTTGGTGGTAGTTT+AGG 0.255139 8_1:+49358615 None:intergenic
GGTCCTGTGGCAACCAAATT+TGG 0.267319 8_1:-49358393 Msa1198050:CDS
CTGCAGGTAGAACTGGTTTC+TGG 0.274081 8_1:+49358049 None:intergenic
TCTGGAAGTTTATCAACTTT+TGG 0.277370 8_1:+49358561 None:intergenic
CAACGTTTGGTGGTAGTTTA+GGG 0.278226 8_1:+49358616 None:intergenic
TGCCTTCTTGGGACCAATTT+CGG 0.281324 8_1:-49358328 Msa1198050:CDS
ATTAGAAGATTCAAGGAAAT+TGG 0.285521 8_1:+49358455 None:intergenic
CTGGTTTCTGGAGAAGGTTT+TGG 0.294816 8_1:+49358061 None:intergenic
ATACCACTGAGCCATGAATT+TGG 0.311579 8_1:+49357950 None:intergenic
GGTTCCCCAGATGAAGATAT+TGG 0.316138 8_1:-49357734 Msa1198050:CDS
GGAGGCGTTGTATGTTTCTT+GGG 0.333304 8_1:+49358637 None:intergenic
TTACCCATAAGAACCGAAAT+TGG 0.346639 8_1:+49358315 None:intergenic
AAGAAGAAGGGAGGATCTAT+AGG 0.349766 8_1:-49357486 Msa1198050:CDS
GAAGTCAATGAGATAGCTTT+AGG 0.354030 8_1:-49357889 Msa1198050:CDS
GGACCAATTTCGGTTCTTAT+GGG 0.355744 8_1:-49358318 Msa1198050:CDS
TGTGGCCCAATATCTTCATC+TGG 0.362321 8_1:+49357728 None:intergenic
GCGGAGTTGTATGTACTGAT+TGG 0.364123 8_1:-49357756 Msa1198050:CDS
TTGAATCTTCTAATGCTGAT+TGG 0.365497 8_1:-49358446 Msa1198050:CDS
CCACCAAATCTTGCCTTCTT+GGG 0.367016 8_1:-49358339 Msa1198050:CDS
GCCAAACTTATAGCACAAAA+AGG 0.373748 8_1:-49358684 Msa1198050:CDS
ACACCTTTGCATTTATTCCT+TGG 0.377125 8_1:+49357608 None:intergenic
GCCACAGGACCCAACCAAAA+AGG 0.377198 8_1:+49358405 None:intergenic
AATGTTTCAAAAGACTTCTA+AGG 0.382714 8_1:+49360162 None:intergenic
GGTCCCAAGAAGGCAAGATT+TGG 0.383630 8_1:+49358336 None:intergenic
TAGATATGTTAATAGCTTGT+TGG 0.389514 8_1:-49360189 Msa1198050:CDS
ATATGGTGGCTCATTCAATT+AGG 0.399777 8_1:-49360298 Msa1198050:CDS
TCATTCAATTAGGCTAGTTA+TGG 0.415103 8_1:-49360288 Msa1198050:CDS
TCTTCTTAATCTCAAAGTAT+TGG 0.427432 8_1:+49358214 None:intergenic
GGTGTTGGAAGAAAAGAAAA+TGG 0.427463 8_1:-49357590 Msa1198050:CDS
CACTGCGGTGTTACAATTGC+CGG 0.429643 8_1:-49357806 Msa1198050:CDS
GTTCCCCAGATGAAGATATT+GGG 0.437600 8_1:-49357733 Msa1198050:CDS
CTATAAGTTTGGCCACTTCA+AGG 0.438928 8_1:+49358694 None:intergenic
AGTTGACCTGCAGGTAGAAC+TGG 0.439370 8_1:+49358042 None:intergenic
TAGCGAAGCAACACCGAGTC+AGG 0.441658 8_1:-49357914 Msa1198050:CDS
CGGAGTTGTATGTACTGATT+GGG 0.444275 8_1:-49357755 Msa1198050:CDS
TTGATGAGAGGAGCAACGTT+TGG 0.449977 8_1:+49358603 None:intergenic
AATCAGCATTAGAAGATTCA+AGG 0.452624 8_1:+49358448 None:intergenic
AGTTTGGCCACTTCAAGGTA+TGG 0.455248 8_1:+49358699 None:intergenic
TGGGTCTTTCACAAGTAATA+TGG 0.456146 8_1:-49360315 Msa1198050:CDS
CGCAGGTTGGACATCGGTGG+TGG 0.466624 8_1:-49357680 Msa1198050:CDS
ACAATTGCCGGAAGGGTTTG+AGG 0.467344 8_1:-49357794 Msa1198050:CDS
TCAGTGGTATATGTGGCTTT+TGG 0.468766 8_1:-49357937 Msa1198050:CDS
TGACACGTGGCAAGGGATCA+AGG 0.469500 8_1:-49357986 Msa1198050:CDS
GAAAGACCCTCGAACAAAGC+TGG 0.475690 8_1:-49358289 Msa1198050:CDS
GTAGAACTGGTTTCTGGAGA+AGG 0.477809 8_1:+49358055 None:intergenic
GTGCGATCCTCAAACCCTTC+CGG 0.479480 8_1:+49357787 None:intergenic
TAATCCTCCAGCTTTGTTCG+AGG 0.481125 8_1:+49358282 None:intergenic
AGAAGAAGGGAGGATCTATA+GGG 0.482971 8_1:-49357485 Msa1198050:CDS
CCCAAGAAGGCAAGATTTGG+TGG 0.489419 8_1:+49358339 None:intergenic
ATGAAGTTAAACCCTGTGCT+AGG 0.492172 8_1:+49358018 None:intergenic
GGGTAGAAACGTAGCTAACT+TGG 0.492638 8_1:+49358658 None:intergenic
AGGAATAAATGCAAAGGTGT+TGG 0.494599 8_1:-49357605 Msa1198050:CDS
TAAAGATGCATTTGACAAGC+TGG 0.497294 8_1:-49358490 Msa1198050:CDS
CTAGTTATGGTTGAAGAAGA+GGG 0.498576 8_1:-49360275 Msa1198050:CDS
TGGTTGGACAGCCAAATTCA+TGG 0.507236 8_1:-49357961 Msa1198050:CDS
CGGTGTTACAATTGCCGGAA+GGG 0.507248 8_1:-49357801 Msa1198050:CDS
GCTAGTTATGGTTGAAGAAG+AGG 0.507870 8_1:-49360276 Msa1198050:CDS
GGGTTTGAGGATCGCACCAA+GGG 0.509426 8_1:-49357781 Msa1198050:CDS
GGAAAATATTAAAGAGGTGA+AGG 0.510228 8_1:-49357464 Msa1198050:CDS
ATACCAAATTTGGTTGCCAC+AGG 0.516802 8_1:+49358390 None:intergenic
ATGAAAATGACACGTGGCAA+GGG 0.521071 8_1:-49357993 Msa1198050:CDS
GCCCTAAGGACCCAAAAGAA+TGG 0.524387 8_1:+49357847 None:intergenic
TACGCCCATGTTGAGCCCTA+AGG 0.525264 8_1:+49357833 None:intergenic
GTGCTAGGGAGTTGACCTGC+AGG 0.531133 8_1:+49358033 None:intergenic
GTTTGGCCACTTCAAGGTAT+GGG 0.532524 8_1:+49358700 None:intergenic
ATATTGGGCCACACGGCGAT+TGG 0.533614 8_1:-49357718 Msa1198050:CDS
ATGAGAGGAGCAACGTTTGG+TGG 0.533879 8_1:+49358606 None:intergenic
GAGGATCGCACCAAGGGGCG+CGG 0.537557 8_1:-49357775 Msa1198050:CDS
GTGCCTAGAGATGAGAGAGA+TGG 0.538469 8_1:-49360335 Msa1198050:CDS
ACATACAACTCCGCGCCCCT+TGG 0.542014 8_1:+49357765 None:intergenic
AGGTTGGACATCGGTGGTGG+AGG 0.542518 8_1:-49357677 Msa1198050:CDS
AGGCCACCACAGATGTCTCA+TGG 0.542587 8_1:-49358530 Msa1198050:CDS
TGGCTAGAGATGAGCAAGAT+GGG 0.542848 8_1:-49357558 Msa1198050:CDS
TTAAATGGAATCCACGGCGG+TGG 0.544495 8_1:+49358252 None:intergenic
GCAGGTCAACTCCCTAGCAC+AGG 0.545358 8_1:-49358030 Msa1198050:CDS
GCAAGGGATCAAGGAGTGGT+TGG 0.547867 8_1:-49357977 Msa1198050:CDS
GTGGCCCAATATCTTCATCT+GGG 0.547925 8_1:+49357729 None:intergenic
AATCCTCCAGCTTTGTTCGA+GGG 0.548171 8_1:+49358283 None:intergenic
CAGAAACCAGTTCTACCTGC+AGG 0.555621 8_1:-49358048 Msa1198050:CDS
GACCCATCTCTCTCATCTCT+AGG 0.559380 8_1:+49360332 None:intergenic
TCATTGACTTCTTCCTGACT+CGG 0.561034 8_1:+49357901 None:intergenic
AGAAAAGTCATCAGCACAAG+TGG 0.561157 8_1:+49357637 None:intergenic
AACAAAGCTGGAGGATTACA+CGG 0.564512 8_1:-49358277 Msa1198050:CDS
GTGGCTAGAGATGAGCAAGA+TGG 0.565000 8_1:-49357559 Msa1198050:CDS
TCATGGCTCAGTGGTATATG+TGG 0.569106 8_1:-49357944 Msa1198050:CDS
AACCGAAATTGGTCCCAAGA+AGG 0.570573 8_1:+49358326 None:intergenic
TGCCTAGAGATGAGAGAGAT+GGG 0.573169 8_1:-49360334 Msa1198050:CDS
TGAAGTTAAACCCTGTGCTA+GGG 0.575642 8_1:+49358019 None:intergenic
TTCTCACGCAGGTTGGACAT+CGG 0.582824 8_1:-49357686 Msa1198050:CDS
TGGGTCCTTAGGGCTCAACA+TGG 0.586072 8_1:-49357838 Msa1198050:CDS
AGGGTTTGAGGATCGCACCA+AGG 0.589726 8_1:-49357782 Msa1198050:CDS
GATTCAAGGAAATTGGTCAA+AGG 0.590526 8_1:+49358462 None:intergenic
CGTTTGGTGGTAGTTTAGGG+AGG 0.592308 8_1:+49358619 None:intergenic
TGGAGGAGTTCAAACCACTC+AGG 0.592728 8_1:+49358081 None:intergenic
CTATAGGGAAAATATTAAAG+AGG 0.593571 8_1:-49357470 Msa1198050:CDS
AGACAATATTAAGAACATGA+AGG 0.602850 8_1:-49360240 Msa1198050:CDS
GAGGCGTTGTATGTTTCTTG+GGG 0.603801 8_1:+49358638 None:intergenic
GATGAAAATGACACGTGGCA+AGG 0.607360 8_1:-49357994 Msa1198050:CDS
GATGAAGATATTGGGCCACA+CGG 0.608183 8_1:-49357725 Msa1198050:CDS
GGCCACCACAGATGTCTCAT+GGG 0.608416 8_1:-49358529 Msa1198050:CDS
CATGATCCCATACCTTGAAG+TGG 0.613332 8_1:-49358706 Msa1198050:CDS
TCACGCAGGTTGGACATCGG+TGG 0.614120 8_1:-49357683 Msa1198050:CDS
GTTTCAAAAGACTTCTAAGG+TGG 0.616549 8_1:+49360165 None:intergenic
GGGTCCTTAGGGCTCAACAT+GGG 0.617818 8_1:-49357837 Msa1198050:CDS
GCGGTGTTACAATTGCCGGA+AGG 0.622907 8_1:-49357802 Msa1198050:CDS
AGACTCACAAATTTGATGAG+AGG 0.625404 8_1:+49358591 None:intergenic
CAGGTCAACTCCCTAGCACA+GGG 0.626853 8_1:-49358029 Msa1198050:CDS
GTCTTTCACAAGTAATATGG+TGG 0.629659 8_1:-49360312 Msa1198050:CDS
GTAGTCTTAAATGGAATCCA+CGG 0.637974 8_1:+49358246 None:intergenic
CAGCCAAATTCATGGCTCAG+TGG 0.646016 8_1:-49357953 Msa1198050:CDS
AGACCAAGGAATAAATGCAA+AGG 0.646402 8_1:-49357611 Msa1198050:CDS
CTTTGAGATTAAGAAGAACG+CGG 0.646419 8_1:-49358208 Msa1198050:CDS
GTCATTCACAAGTGACTCAG+TGG 0.647293 8_1:-49357536 Msa1198050:CDS
GTATGGGATCATGTGACCAA+AGG 0.648655 8_1:+49358716 None:intergenic
TGGCCCAATATCTTCATCTG+GGG 0.655352 8_1:+49357730 None:intergenic
ATCCCATGAGACATCTGTGG+TGG 0.659387 8_1:+49358527 None:intergenic
CGTGGCAAGGGATCAAGGAG+TGG 0.660281 8_1:-49357981 Msa1198050:CDS
ATTACACGGCTCCACCGCCG+TGG 0.661465 8_1:-49358263 Msa1198050:CDS
AGACCCTCGAACAAAGCTGG+AGG 0.676253 8_1:-49358286 Msa1198050:CDS
GACATCCCATGAGACATCTG+TGG 0.694938 8_1:+49358524 None:intergenic
GATTCCATTTAAGACTACAG+TGG 0.700595 8_1:-49358241 Msa1198050:CDS
AGAAAACACCAATCGCCGTG+TGG 0.706911 8_1:+49357710 None:intergenic
GTACTGAATTTGAACCTGAG+TGG 0.709404 8_1:-49358095 Msa1198050:CDS
GGTTTGAGGATCGCACCAAG+GGG 0.712408 8_1:-49357780 Msa1198050:CDS
TAAACTTCCAGAAAATGCAG+AGG 0.714922 8_1:-49358550 Msa1198050:CDS
AAAGAAAATGGCATACACAG+TGG 0.715840 8_1:-49357578 Msa1198050:CDS
GTCTTAAATGGAATCCACGG+CGG 0.732142 8_1:+49358249 None:intergenic
TCATCGATGAAAATGACACG+TGG 0.732754 8_1:-49357999 Msa1198050:CDS
ACATGGGCGTAAAGACACTG+CGG 0.798952 8_1:-49357821 Msa1198050:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGTAGTTATAAATTATTTAA+GGG - chr8_1:49358605-49358624 Msa1198050:CDS 10.0%
!!! TGTTTTATTGATATTATAAA+AGG - chr8_1:49358848-49358867 Msa1198050:intron 10.0%
!!! TCTCATTATAATTCTTTTTA+AGG - chr8_1:49358153-49358172 Msa1198050:CDS 15.0%
!! TTATTAAGAAAATGATTAGT+TGG - chr8_1:49358186-49358205 Msa1198050:CDS 15.0%
!!! TATTAAGAAAATGATTAGTT+GGG - chr8_1:49358187-49358206 Msa1198050:CDS 15.0%
!!! ATTAATAATGTTGATTTTAC+TGG - chr8_1:49358533-49358552 Msa1198050:CDS 15.0%
!!! TATAATTAATAAGAGTGTTT+TGG + chr8_1:49358577-49358596 None:intergenic 15.0%
!! CTCTTATTAATTATAATTAG+TGG - chr8_1:49358582-49358601 Msa1198050:CDS 15.0%
!! GAGTAGTTATAAATTATTTA+AGG - chr8_1:49358604-49358623 Msa1198050:CDS 15.0%
!! TAAAAATAGGAATATTGTAT+TGG + chr8_1:49358743-49358762 None:intergenic 15.0%
!! TAGTCATTTGAATTATTCTA+AGG + chr8_1:49357905-49357924 None:intergenic 20.0%
!!! ATTCTTTTTAAGGATAACAA+CGG - chr8_1:49358163-49358182 Msa1198050:CDS 20.0%
!! TTAGTTAAGAGGATAAAAAT+AGG + chr8_1:49358756-49358775 None:intergenic 20.0%
!! TACAGCTAAATTTAATGATT+TGG - chr8_1:49358956-49358975 Msa1198050:intron 20.0%
!!! AACACATTTTATACCAAATT+TGG + chr8_1:49359354-49359373 None:intergenic 20.0%
! AGACAATATTAAGAACATGA+AGG - chr8_1:49357491-49357510 Msa1198050:CDS 25.0%
!! TAGATATGTTAATAGCTTGT+TGG - chr8_1:49357542-49357561 Msa1198050:CDS 25.0%
! AATGTTTCAAAAGACTTCTA+AGG + chr8_1:49357572-49357591 None:intergenic 25.0%
! CTTAATCACTTACTTATTGT+CGG - chr8_1:49357631-49357650 Msa1198050:CDS 25.0%
! TATTAATGAATGCAGTTACA+AGG + chr8_1:49357724-49357743 None:intergenic 25.0%
! TGTAACTGCATTCATTAATA+AGG - chr8_1:49357724-49357743 Msa1198050:CDS 25.0%
! AAGTCATTTGATTCATTCTA+AGG + chr8_1:49357876-49357895 None:intergenic 25.0%
! ATAAGTTTACGAGTAAACAA+AGG + chr8_1:49357978-49357997 None:intergenic 25.0%
!! CTCGTAAACTTATATTTTGT+AGG - chr8_1:49357985-49358004 Msa1198050:CDS 25.0%
! TTCATTATTAAATGCCCTTA+GGG + chr8_1:49358646-49358665 None:intergenic 25.0%
! TTTCATTATTAAATGCCCTT+AGG + chr8_1:49358647-49358666 None:intergenic 25.0%
!! AATTCAATGCTTACAACTTT+TGG + chr8_1:49358670-49358689 None:intergenic 25.0%
!!! AAATGCTAAAAAGTGTCATT+AGG + chr8_1:49358782-49358801 None:intergenic 25.0%
! ATTAGAAGATTCAAGGAAAT+TGG + chr8_1:49359279-49359298 None:intergenic 25.0%
! TCTTCTTAATCTCAAAGTAT+TGG + chr8_1:49359520-49359539 None:intergenic 25.0%
! CTATAGGGAAAATATTAAAG+AGG - chr8_1:49360261-49360280 Msa1198050:CDS 25.0%
! TCATTCAATTAGGCTAGTTA+TGG - chr8_1:49357443-49357462 Msa1198050:CDS 30.0%
ACATATCTATCTTGTCTTTC+AGG + chr8_1:49357531-49357550 None:intergenic 30.0%
!! GTCTACTTCACTTTGAAATT+TGG + chr8_1:49357660-49357679 None:intergenic 30.0%
GAGACTAATTGAACATATTC+TGG + chr8_1:49358091-49358110 None:intergenic 30.0%
! GAATATGTTCAATTAGTCTC+AGG - chr8_1:49358091-49358110 Msa1198050:CDS 30.0%
CTCAAATAACTACAATTCGA+AGG + chr8_1:49358254-49358273 None:intergenic 30.0%
CTCAAATAACTACAATTCGA+AGG + chr8_1:49358254-49358273 None:intergenic 30.0%
ACTGACAATTTAAATGAGAC+CGG - chr8_1:49358435-49358454 Msa1198050:CDS 30.0%
!!! GAGTCTTATTTGAGTTTTAC+AGG - chr8_1:49358495-49358514 Msa1198050:CDS 30.0%
TCATTAGGACATTAGTTAAG+AGG + chr8_1:49358767-49358786 None:intergenic 30.0%
TTCACATAGTAATGTTTCCA+TGG - chr8_1:49358988-49359007 Msa1198050:intron 30.0%
! ACCTTTTTGTGCTATAAGTT+TGG + chr8_1:49359051-49359070 None:intergenic 30.0%
! AGTTTATCAACTTTTGGCAT+TGG + chr8_1:49359167-49359186 None:intergenic 30.0%
! TCTGGAAGTTTATCAACTTT+TGG + chr8_1:49359173-49359192 None:intergenic 30.0%
AATCAGCATTAGAAGATTCA+AGG + chr8_1:49359286-49359305 None:intergenic 30.0%
TTGAATCTTCTAATGCTGAT+TGG - chr8_1:49359285-49359304 Msa1198050:intron 30.0%
! AGTTTTCTCCAAAAATGACT+CGG - chr8_1:49359547-49359566 Msa1198050:intron 30.0%
! AGTCAAATCTTCCATTCTTT+TGG - chr8_1:49359873-49359892 Msa1198050:intron 30.0%
! GTCAAATCTTCCATTCTTTT+GGG - chr8_1:49359874-49359893 Msa1198050:intron 30.0%
GGAAAATATTAAAGAGGTGA+AGG - chr8_1:49360267-49360286 Msa1198050:CDS 30.0%
! AACGTTTCAAACGACTTTTA+AGG + chr8_1:49360348-49360367 None:intergenic 30.0%
TGGGTCTTTCACAAGTAATA+TGG - chr8_1:49357416-49357435 Msa1198050:CDS 35.0%
GTCTTTCACAAGTAATATGG+TGG - chr8_1:49357419-49357438 Msa1198050:CDS 35.0%
ATATGGTGGCTCATTCAATT+AGG - chr8_1:49357433-49357452 Msa1198050:CDS 35.0%
CTAGTTATGGTTGAAGAAGA+GGG - chr8_1:49357456-49357475 Msa1198050:CDS 35.0%
! GTTTCAAAAGACTTCTAAGG+TGG + chr8_1:49357569-49357588 None:intergenic 35.0%
GTGATTAAGCTCAACGAAAA+TGG + chr8_1:49357620-49357639 None:intergenic 35.0%
!!! TCTGGTTTTGAAACCTTGAA+CGG + chr8_1:49358073-49358092 None:intergenic 35.0%
CTGACAATTTAAATGAGACC+GGG - chr8_1:49358436-49358455 Msa1198050:CDS 35.0%
TGACAATTTAAATGAGACCG+GGG - chr8_1:49358437-49358456 Msa1198050:CDS 35.0%
AGTATTAAGAAGTTACTCCC+CGG + chr8_1:49358457-49358476 None:intergenic 35.0%
AGATGACACCTAATATGAGA+TGG - chr8_1:49358903-49358922 Msa1198050:intron 35.0%
GGAAACATTACTATGTGAAG+TGG + chr8_1:49358987-49359006 None:intergenic 35.0%
GCCAAACTTATAGCACAAAA+AGG - chr8_1:49359047-49359066 Msa1198050:intron 35.0%
AGACTCACAAATTTGATGAG+AGG + chr8_1:49359143-49359162 None:intergenic 35.0%
TAAACTTCCAGAAAATGCAG+AGG - chr8_1:49359181-49359200 Msa1198050:intron 35.0%
GCTTGTCAAATGCATCTTTA+AGG + chr8_1:49359241-49359260 None:intergenic 35.0%
TAAAGATGCATTTGACAAGC+TGG - chr8_1:49359241-49359260 Msa1198050:intron 35.0%
GATTCAAGGAAATTGGTCAA+AGG + chr8_1:49359272-49359291 None:intergenic 35.0%
! TGCATGATTTTGCTCCTTTT+TGG - chr8_1:49359312-49359331 Msa1198050:intron 35.0%
!! TGATTTTGCTCCTTTTTGGT+TGG - chr8_1:49359316-49359335 Msa1198050:intron 35.0%
!!! GATTTTGCTCCTTTTTGGTT+GGG - chr8_1:49359317-49359336 Msa1198050:intron 35.0%
TTACCCATAAGAACCGAAAT+TGG + chr8_1:49359419-49359438 None:intergenic 35.0%
! GTAGTCTTAAATGGAATCCA+CGG + chr8_1:49359488-49359507 None:intergenic 35.0%
! GATTCCATTTAAGACTACAG+TGG - chr8_1:49359490-49359509 Msa1198050:intron 35.0%
! TATGCCACTGTAGTCTTAAA+TGG + chr8_1:49359497-49359516 None:intergenic 35.0%
!! CTTTGAGATTAAGAAGAACG+CGG - chr8_1:49359523-49359542 Msa1198050:intron 35.0%
! GTTTTCTCCAAAAATGACTC+GGG - chr8_1:49359548-49359567 Msa1198050:intron 35.0%
!! AGAAATACCCGAGTCATTTT+TGG + chr8_1:49359558-49359577 None:intergenic 35.0%
GAAGTCAATGAGATAGCTTT+AGG - chr8_1:49359842-49359861 Msa1198050:intron 35.0%
! ATGACTTTTCTTGTAGACCA+AGG - chr8_1:49360106-49360125 Msa1198050:intron 35.0%
AGACCAAGGAATAAATGCAA+AGG - chr8_1:49360120-49360139 Msa1198050:intron 35.0%
ACACCTTTGCATTTATTCCT+TGG + chr8_1:49360126-49360145 None:intergenic 35.0%
! AGGAATAAATGCAAAGGTGT+TGG - chr8_1:49360126-49360145 Msa1198050:intron 35.0%
! GGTGTTGGAAGAAAAGAAAA+TGG - chr8_1:49360141-49360160 Msa1198050:intron 35.0%
AAAGAAAATGGCATACACAG+TGG - chr8_1:49360153-49360172 Msa1198050:intron 35.0%
!! TAGTTTTGCTCGAAGAAGAA+GGG - chr8_1:49360233-49360252 Msa1198050:CDS 35.0%
!! GTTTCAAACGACTTTTAAGG+TGG + chr8_1:49360345-49360364 None:intergenic 35.0%
GCTAGTTATGGTTGAAGAAG+AGG - chr8_1:49357455-49357474 Msa1198050:CDS 40.0%
GAATAAACCCTCCCAAATCT+TGG - chr8_1:49358045-49358064 Msa1198050:CDS 40.0%
!!! TGGTTTTGAAACCTTGAACG+GGG + chr8_1:49358071-49358090 None:intergenic 40.0%
!!! CTGGTTTTGAAACCTTGAAC+GGG + chr8_1:49358072-49358091 None:intergenic 40.0%
TGACACCTAATATGAGATGG+AGG - chr8_1:49358906-49358925 Msa1198050:intron 40.0%
GACACCTAATATGAGATGGA+GGG - chr8_1:49358907-49358926 Msa1198050:intron 40.0%
TACTCCCTCCATCTCATATT+AGG + chr8_1:49358914-49358933 None:intergenic 40.0%
CTATAAGTTTGGCCACTTCA+AGG + chr8_1:49359040-49359059 None:intergenic 40.0%
! CAACGTTTGGTGGTAGTTTA+GGG + chr8_1:49359118-49359137 None:intergenic 40.0%
ATACCAAATTTGGTTGCCAC+AGG + chr8_1:49359344-49359363 None:intergenic 40.0%
GGACCAATTTCGGTTCTTAT+GGG - chr8_1:49359413-49359432 Msa1198050:intron 40.0%
AACAAAGCTGGAGGATTACA+CGG - chr8_1:49359454-49359473 Msa1198050:intron 40.0%
GTACTGAATTTGAACCTGAG+TGG - chr8_1:49359636-49359655 Msa1198050:intron 40.0%
TGAAGTTAAACCCTGTGCTA+GGG + chr8_1:49359715-49359734 None:intergenic 40.0%
ATGAAGTTAAACCCTGTGCT+AGG + chr8_1:49359716-49359735 None:intergenic 40.0%
TCATCGATGAAAATGACACG+TGG - chr8_1:49359732-49359751 Msa1198050:intron 40.0%
ATGAAAATGACACGTGGCAA+GGG - chr8_1:49359738-49359757 Msa1198050:intron 40.0%
ATACCACTGAGCCATGAATT+TGG + chr8_1:49359784-49359803 None:intergenic 40.0%
! TCAGTGGTATATGTGGCTTT+TGG - chr8_1:49359794-49359813 Msa1198050:intron 40.0%
!! TCATTGACTTCTTCCTGACT+CGG + chr8_1:49359833-49359852 None:intergenic 40.0%
!! TTCCATTCTTTTGGGTCCTT+AGG - chr8_1:49359882-49359901 Msa1198050:intron 40.0%
!! TCCATTCTTTTGGGTCCTTA+GGG - chr8_1:49359883-49359902 Msa1198050:intron 40.0%
!! CGGAGTTGTATGTACTGATT+GGG - chr8_1:49359976-49359995 Msa1198050:intron 40.0%
GTTCCCCAGATGAAGATATT+GGG - chr8_1:49359998-49360017 Msa1198050:intron 40.0%
! TTTTCTTTTCTCACGCAGGT+TGG - chr8_1:49360038-49360057 Msa1198050:intron 40.0%
AGAAAAGTCATCAGCACAAG+TGG + chr8_1:49360097-49360116 None:intergenic 40.0%
!!! CTAGTTTTGCTCGAAGAAGA+AGG - chr8_1:49360232-49360251 Msa1198050:CDS 40.0%
AAGAAGAAGGGAGGATCTAT+AGG - chr8_1:49360245-49360264 Msa1198050:CDS 40.0%
AGAAGAAGGGAGGATCTATA+GGG - chr8_1:49360246-49360265 Msa1198050:CDS 40.0%
TGCCTAGAGATGAGAGAGAT+GGG - chr8_1:49357397-49357416 Msa1198050:CDS 45.0%
CTCAACAGAATCACTCTGAG+AGG - chr8_1:49357948-49357967 Msa1198050:CDS 45.0%
ATGTGCTAACAAGTGCCCTA+AGG - chr8_1:49358628-49358647 Msa1198050:CDS 45.0%
TGTGCTAACAAGTGCCCTAA+GGG - chr8_1:49358629-49358648 Msa1198050:CDS 45.0%
GAGATGGAGGGAGTAATAGA+CGG - chr8_1:49358919-49358938 Msa1198050:intron 45.0%
!! ATGTTTCCATGGCTAGCCTT+TGG - chr8_1:49358999-49359018 Msa1198050:intron 45.0%
GTATGGGATCATGTGACCAA+AGG + chr8_1:49359018-49359037 None:intergenic 45.0%
CATGATCCCATACCTTGAAG+TGG - chr8_1:49359025-49359044 Msa1198050:intron 45.0%
GTTTGGCCACTTCAAGGTAT+GGG + chr8_1:49359034-49359053 None:intergenic 45.0%
AGTTTGGCCACTTCAAGGTA+TGG + chr8_1:49359035-49359054 None:intergenic 45.0%
GGGTAGAAACGTAGCTAACT+TGG + chr8_1:49359076-49359095 None:intergenic 45.0%
!! GAGGCGTTGTATGTTTCTTG+GGG + chr8_1:49359096-49359115 None:intergenic 45.0%
!! GGAGGCGTTGTATGTTTCTT+GGG + chr8_1:49359097-49359116 None:intergenic 45.0%
! GCAACGTTTGGTGGTAGTTT+AGG + chr8_1:49359119-49359138 None:intergenic 45.0%
TTGATGAGAGGAGCAACGTT+TGG + chr8_1:49359131-49359150 None:intergenic 45.0%
TCCACCAAATCTTGCCTTCT+TGG - chr8_1:49359391-49359410 Msa1198050:intron 45.0%
CCACCAAATCTTGCCTTCTT+GGG - chr8_1:49359392-49359411 Msa1198050:intron 45.0%
TGCCTTCTTGGGACCAATTT+CGG - chr8_1:49359403-49359422 Msa1198050:intron 45.0%
AACCGAAATTGGTCCCAAGA+AGG + chr8_1:49359408-49359427 None:intergenic 45.0%
GGGACCAATTTCGGTTCTTA+TGG - chr8_1:49359412-49359431 Msa1198050:intron 45.0%
!! AATCCTCCAGCTTTGTTCGA+GGG + chr8_1:49359451-49359470 None:intergenic 45.0%
!! TAATCCTCCAGCTTTGTTCG+AGG + chr8_1:49359452-49359471 None:intergenic 45.0%
GTCTTAAATGGAATCCACGG+CGG + chr8_1:49359485-49359504 None:intergenic 45.0%
!!! TGCGACACGATTTTGATTCG+CGG - chr8_1:49359611-49359630 Msa1198050:intron 45.0%
!! GTTTCTGGAGAAGGTTTTGG+AGG + chr8_1:49359670-49359689 None:intergenic 45.0%
!! CTGGTTTCTGGAGAAGGTTT+TGG + chr8_1:49359673-49359692 None:intergenic 45.0%
! GTAGAACTGGTTTCTGGAGA+AGG + chr8_1:49359679-49359698 None:intergenic 45.0%
GATGAAAATGACACGTGGCA+AGG - chr8_1:49359737-49359756 Msa1198050:intron 45.0%
TGGTTGGACAGCCAAATTCA+TGG - chr8_1:49359770-49359789 Msa1198050:intron 45.0%
TCATGGCTCAGTGGTATATG+TGG - chr8_1:49359787-49359806 Msa1198050:intron 45.0%
! GCGGAGTTGTATGTACTGAT+TGG - chr8_1:49359975-49359994 Msa1198050:intron 45.0%
GGTTCCCCAGATGAAGATAT+TGG - chr8_1:49359997-49360016 Msa1198050:intron 45.0%
TGGCCCAATATCTTCATCTG+GGG + chr8_1:49360004-49360023 None:intergenic 45.0%
GTGGCCCAATATCTTCATCT+GGG + chr8_1:49360005-49360024 None:intergenic 45.0%
TGTGGCCCAATATCTTCATC+TGG + chr8_1:49360006-49360025 None:intergenic 45.0%
GATGAAGATATTGGGCCACA+CGG - chr8_1:49360006-49360025 Msa1198050:intron 45.0%
! GGTGTTTTCTTTTCTCACGC+AGG - chr8_1:49360034-49360053 Msa1198050:intron 45.0%
TGGCTAGAGATGAGCAAGAT+GGG - chr8_1:49360173-49360192 Msa1198050:intron 45.0%
GTCATTCACAAGTGACTCAG+TGG - chr8_1:49360195-49360214 Msa1198050:CDS 45.0%
! TTTTGCTCGAAGAAGAAGGG+AGG - chr8_1:49360236-49360255 Msa1198050:CDS 45.0%
GTGCCTAGAGATGAGAGAGA+TGG - chr8_1:49357396-49357415 Msa1198050:CDS 50.0%
GACCCATCTCTCTCATCTCT+AGG + chr8_1:49357402-49357421 None:intergenic 50.0%
CTTGAACGGGGCCAAGATTT+GGG + chr8_1:49358059-49358078 None:intergenic 50.0%
! ATGTGACCAAAGGCTAGCCA+TGG + chr8_1:49359008-49359027 None:intergenic 50.0%
!! GGGAGGCGTTGTATGTTTCT+TGG + chr8_1:49359098-49359117 None:intergenic 50.0%
! CGTTTGGTGGTAGTTTAGGG+AGG + chr8_1:49359115-49359134 None:intergenic 50.0%
ATGAGAGGAGCAACGTTTGG+TGG + chr8_1:49359128-49359147 None:intergenic 50.0%
ATCCCATGAGACATCTGTGG+TGG + chr8_1:49359207-49359226 None:intergenic 50.0%
GACATCCCATGAGACATCTG+TGG + chr8_1:49359210-49359229 None:intergenic 50.0%
!!! TCCTTTTTGGTTGGGTCCTG+TGG - chr8_1:49359325-49359344 Msa1198050:intron 50.0%
GGTCCTGTGGCAACCAAATT+TGG - chr8_1:49359338-49359357 Msa1198050:intron 50.0%
CCCAAGAAGGCAAGATTTGG+TGG + chr8_1:49359395-49359414 None:intergenic 50.0%
GGTCCCAAGAAGGCAAGATT+TGG + chr8_1:49359398-49359417 None:intergenic 50.0%
GAAAGACCCTCGAACAAAGC+TGG - chr8_1:49359442-49359461 Msa1198050:intron 50.0%
TTAAATGGAATCCACGGCGG+TGG + chr8_1:49359482-49359501 None:intergenic 50.0%
TGGAGGAGTTCAAACCACTC+AGG + chr8_1:49359653-49359672 None:intergenic 50.0%
! CTGCAGGTAGAACTGGTTTC+TGG + chr8_1:49359685-49359704 None:intergenic 50.0%
CAGAAACCAGTTCTACCTGC+AGG - chr8_1:49359683-49359702 Msa1198050:intron 50.0%
AGTTGACCTGCAGGTAGAAC+TGG + chr8_1:49359692-49359711 None:intergenic 50.0%
CAGCCAAATTCATGGCTCAG+TGG - chr8_1:49359778-49359797 Msa1198050:intron 50.0%
GCCCTAAGGACCCAAAAGAA+TGG + chr8_1:49359887-49359906 None:intergenic 50.0%
ACATGGGCGTAAAGACACTG+CGG - chr8_1:49359910-49359929 Msa1198050:intron 50.0%
!! CACTGCGGTGTTACAATTGC+CGG - chr8_1:49359925-49359944 Msa1198050:intron 50.0%
!! CGGTGTTACAATTGCCGGAA+GGG - chr8_1:49359930-49359949 Msa1198050:intron 50.0%
ACAATTGCCGGAAGGGTTTG+AGG - chr8_1:49359937-49359956 Msa1198050:intron 50.0%
AGAAAACACCAATCGCCGTG+TGG + chr8_1:49360024-49360043 None:intergenic 50.0%
! TTCTCACGCAGGTTGGACAT+CGG - chr8_1:49360045-49360064 Msa1198050:intron 50.0%
GTGGCTAGAGATGAGCAAGA+TGG - chr8_1:49360172-49360191 Msa1198050:intron 50.0%
AACGGGGCCAAGATTTGGGA+GGG + chr8_1:49358055-49358074 None:intergenic 55.0%
CCTTGAACGGGGCCAAGATT+TGG + chr8_1:49358060-49358079 None:intergenic 55.0%
CCAAATCTTGGCCCCGTTCA+AGG - chr8_1:49358057-49358076 Msa1198050:CDS 55.0%
! GTGGTGGCCTCTGCATTTTC+TGG + chr8_1:49359191-49359210 None:intergenic 55.0%
AGGCCACCACAGATGTCTCA+TGG - chr8_1:49359201-49359220 Msa1198050:intron 55.0%
GGCCACCACAGATGTCTCAT+GGG - chr8_1:49359202-49359221 Msa1198050:intron 55.0%
GCCACAGGACCCAACCAAAA+AGG + chr8_1:49359329-49359348 None:intergenic 55.0%
AGACCCTCGAACAAAGCTGG+AGG - chr8_1:49359445-49359464 Msa1198050:intron 55.0%
!! CGTGTCGCAGTTCTGAACAC+AGG + chr8_1:49359600-49359619 None:intergenic 55.0%
CAGGTCAACTCCCTAGCACA+GGG - chr8_1:49359702-49359721 Msa1198050:intron 55.0%
TGACACGTGGCAAGGGATCA+AGG - chr8_1:49359745-49359764 Msa1198050:intron 55.0%
GCAAGGGATCAAGGAGTGGT+TGG - chr8_1:49359754-49359773 Msa1198050:intron 55.0%
TAGCGAAGCAACACCGAGTC+AGG - chr8_1:49359817-49359836 Msa1198050:intron 55.0%
TGGGTCCTTAGGGCTCAACA+TGG - chr8_1:49359893-49359912 Msa1198050:intron 55.0%
GGGTCCTTAGGGCTCAACAT+GGG - chr8_1:49359894-49359913 Msa1198050:intron 55.0%
TACGCCCATGTTGAGCCCTA+AGG + chr8_1:49359901-49359920 None:intergenic 55.0%
!! GCGGTGTTACAATTGCCGGA+AGG - chr8_1:49359929-49359948 Msa1198050:intron 55.0%
GTGCGATCCTCAAACCCTTC+CGG + chr8_1:49359947-49359966 None:intergenic 55.0%
AGGGTTTGAGGATCGCACCA+AGG - chr8_1:49359949-49359968 Msa1198050:intron 55.0%
GGGTTTGAGGATCGCACCAA+GGG - chr8_1:49359950-49359969 Msa1198050:intron 55.0%
GGTTTGAGGATCGCACCAAG+GGG - chr8_1:49359951-49359970 Msa1198050:intron 55.0%
ATATTGGGCCACACGGCGAT+TGG - chr8_1:49360013-49360032 Msa1198050:intron 55.0%
GAACGGGGCCAAGATTTGGG+AGG + chr8_1:49358056-49358075 None:intergenic 60.0%
GTGCTAGGGAGTTGACCTGC+AGG + chr8_1:49359701-49359720 None:intergenic 60.0%
GCAGGTCAACTCCCTAGCAC+AGG - chr8_1:49359701-49359720 Msa1198050:intron 60.0%
CGTGGCAAGGGATCAAGGAG+TGG - chr8_1:49359750-49359769 Msa1198050:intron 60.0%
ACATACAACTCCGCGCCCCT+TGG + chr8_1:49359969-49359988 None:intergenic 60.0%
! TCACGCAGGTTGGACATCGG+TGG - chr8_1:49360048-49360067 Msa1198050:intron 60.0%
! AGGTTGGACATCGGTGGTGG+AGG - chr8_1:49360054-49360073 Msa1198050:intron 60.0%
ATTACACGGCTCCACCGCCG+TGG - chr8_1:49359468-49359487 Msa1198050:intron 65.0%
! CGCAGGTTGGACATCGGTGG+TGG - chr8_1:49360051-49360070 Msa1198050:intron 65.0%
GAGGATCGCACCAAGGGGCG+CGG - chr8_1:49359956-49359975 Msa1198050:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 49357384 49360369 49357384 ID=Msa1198050;Name=Msa1198050
chr8_1 mRNA 49357384 49360369 49357384 ID=Msa1198050-mRNA-1;Parent=Msa1198050;Name=Msa1198050-mRNA-1;_AED=0.32;_eAED=0.32;_QI=0|0|0|1|0|0|2|0|515
chr8_1 exon 49360177 49360369 49360177 ID=Msa1198050-mRNA-1:exon:15485;Parent=Msa1198050-mRNA-1
chr8_1 exon 49357384 49358738 49357384 ID=Msa1198050-mRNA-1:exon:15484;Parent=Msa1198050-mRNA-1
chr8_1 CDS 49360177 49360369 49360177 ID=Msa1198050-mRNA-1:cds;Parent=Msa1198050-mRNA-1
chr8_1 CDS 49357384 49358738 49357384 ID=Msa1198050-mRNA-1:cds;Parent=Msa1198050-mRNA-1
Gene Sequence

>Msa1198050

ATGGGGTACTCGGTGCCTAGAGATGAGAGAGATGGGTCTTTCACAAGTAATATGGTGGCTCATTCAATTAGGCTAGTTATGGTTGAAGAAGAGGGAATGATCTATAGAGACAATATTAAGAACATGAAGGATTTGTTTGTCAATCCTGAAAGACAAGATAGATATGTTAATAGCTTGTTGGACCACCTTAGAACCTTTGGTCACATGATCCCATACCTTGAAGTGGCCAAACTTATAGCACAAAAAGGTCACCAAGTTAGCTACGTTTCTACCCCAAGAAACATACAACGCCTCCCTAAACTACCACCAAACGTTGCTCCTCTCATCAAATTTGTGAGTCTTCCAATGCCAAAAGTTGATAAACTTCCAGAAAATGCAGAGGCCACCACAGATGTCTCATGGGATGTCTTTCAATACCTTAAAGATGCATTTGACAAGCTGGAACAACCTTTGACCAATTTCCTTGAATCTTCTAATGCTGATTGGATTTTGCATGATTTTGCTCCTTTTTGGTTGGGTCCTGTGGCAACCAAATTTGGTATAAAATGTGTTTTTTTCAACATTACTACTCCACCAAATCTTGCCTTCTTGGGACCAATTTCGGTTCTTATGGGTAAAGAGAAAGACCCTCGAACAAAGCTGGAGGATTACACGGCTCCACCGCCGTGGATTCCATTTAAGACTACAGTGGCATACCAATACTTTGAGATTAAGAAGAACGCGGAAGTTTTCTCCAAAAATGACTCGGGTATTTCTGAAATGCATCGTGTTAGTTCCTGTGTTCAGAACTGCGACACGATTTTGATTCGCGGTTGTACTGAATTTGAACCTGAGTGGTTTGAACTCCTCCAAAACCTTCTCCAGAAACCAGTTCTACCTGCAGGTCAACTCCCTAGCACAGGGTTTAACTTCATCGATGAAAATGACACGTGGCAAGGGATCAAGGAGTGGTTGGACAGCCAAATTCATGGCTCAGTGGTATATGTGGCTTTTGGTAGCGAAGCAACACCGAGTCAGGAAGAAGTCAATGAGATAGCTTTAGGATTAGAGAAGTCAAATCTTCCATTCTTTTGGGTCCTTAGGGCTCAACATGGGCGTAAAGACACTGCGGTGTTACAATTGCCGGAAGGGTTTGAGGATCGCACCAAGGGGCGCGGAGTTGTATGTACTGATTGGGTTCCCCAGATGAAGATATTGGGCCACACGGCGATTGGTGTTTTCTTTTCTCACGCAGGTTGGACATCGGTGGTGGAGGCAATTCAGAATGAGAAGCCACTTGTGCTGATGACTTTTCTTGTAGACCAAGGAATAAATGCAAAGGTGTTGGAAGAAAAGAAAATGGCATACACAGTGGCTAGAGATGAGCAAGATGGGTCATTCACAAGTGACTCAGTGGCTCGCTCAATTAGACTAGTTTTGCTCGAAGAAGAAGGGAGGATCTATAGGGAAAATATTAAAGAGGTGAAGGACTTGTTTGTCAATATTGAAAGACAAGATAGATATATTGACAACTTGTTAGACCACCTTAAAAGTCGTTTGAAACGTTGA
Protein sequence

>Msa1198050

MGYSVPRDERDGSFTSNMVAHSIRLVMVEEEGMIYRDNIKNMKDLFVNPERQDRYVNSLLDHLRTFGHMIPYLEVAKLIAQKGHQVSYVSTPRNIQRLPKLPPNVAPLIKFVSLPMPKVDKLPENAEATTDVSWDVFQYLKDAFDKLEQPLTNFLESSNADWILHDFAPFWLGPVATKFGIKCVFFNITTPPNLAFLGPISVLMGKEKDPRTKLEDYTAPPPWIPFKTTVAYQYFEIKKNAEVFSKNDSGISEMHRVSSCVQNCDTILIRGCTEFEPEWFELLQNLLQKPVLPAGQLPSTGFNFIDENDTWQGIKEWLDSQIHGSVVYVAFGSEATPSQEEVNEIALGLEKSNLPFFWVLRAQHGRKDTAVLQLPEGFEDRTKGRGVVCTDWVPQMKILGHTAIGVFFSHAGWTSVVEAIQNEKPLVLMTFLVDQGINAKVLEEKKMAYTVARDEQDGSFTSDSVARSIRLVLLEEEGRIYRENIKEVKDLFVNIERQDRYIDNLLDHLKSRLKR*