Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0753920 | XP_003611167.1 | 98.514 | 471 | 6 | 1 | 1 | 470 | 1 | 471 | 0.0 | 965 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0753920 | sp|P54873|HMCS_ARATH | 76.923 | 468 | 98 | 2 | 5 | 470 | 2 | 461 | 0.0 | 774 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0753920 | G7KER8 | 98.514 | 471 | 6 | 1 | 1 | 470 | 1 | 471 | 0.0 | 965 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0090850 | Msa0753920 | 0.822755 | 1.998602e-53 | -8.615850e-47 |
| Msa0753920 | Msa0807010 | 0.955085 | 6.812710e-113 | -8.615850e-47 |
| Msa0753920 | Msa0832940 | 0.958783 | 9.999640e-117 | -8.615850e-47 |
| Msa0753920 | Msa1132990 | 0.930110 | 2.636456e-93 | -8.615850e-47 |
| Msa0753920 | Msa1198050 | 0.809979 | 1.447332e-50 | -8.615850e-47 |
| Msa0753920 | Msa1200500 | 0.818731 | 1.681669e-52 | -8.615850e-47 |
| Msa0753920 | Msa1251740 | 0.804265 | 2.346771e-49 | -8.615850e-47 |
| Msa0753920 | Msa1253520 | 0.824713 | 6.955123e-54 | -8.615850e-47 |
| Msa0753920 | Msa1293840 | 0.829936 | 3.895234e-55 | -8.615850e-47 |
| Msa0189720 | Msa0753920 | 0.820753 | 5.806422e-53 | -8.615850e-47 |
| Msa0212300 | Msa0753920 | 0.830776 | 2.427832e-55 | -8.615850e-47 |
| Msa0232100 | Msa0753920 | 0.816473 | 5.432190e-52 | -8.615850e-47 |
| Msa0310130 | Msa0753920 | 0.800540 | 1.373826e-48 | -8.615850e-47 |
| Msa0484200 | Msa0753920 | 0.805442 | 1.332386e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0753920 | MtrunA17_Chr5g0398151 | 98.514 | 471 | 6 | 1 | 1 | 470 | 1 | 471 | 0.0 | 965 |
| Msa0753920 | MtrunA17_Chr6g0474311 | 79.596 | 446 | 91 | 0 | 7 | 452 | 8 | 453 | 0.0 | 775 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0753920 | AT4G11820.2 | 76.923 | 468 | 98 | 2 | 5 | 470 | 2 | 461 | 0.0 | 774 |
| Msa0753920 | AT4G11820.3 | 75.604 | 414 | 91 | 2 | 59 | 470 | 1 | 406 | 0.0 | 670 |
| Msa0753920 | AT4G11820.1 | 75.604 | 414 | 91 | 2 | 59 | 470 | 1 | 406 | 0.0 | 670 |
Find 125 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTGCTTTCAAAAGAAAT+AGG | 0.210965 | 5_2:-7523909 | None:intergenic |
| TCTATGCAACGAACAATAAA+TGG | 0.242624 | 5_2:+7526388 | Msa0753920:three_prime_UTR |
| GTCTGGAACAAACAGAAATA+TGG | 0.263458 | 5_2:+7523535 | Msa0753920:intron |
| GCAATGTTTGACAAACTAAA+TGG | 0.286875 | 5_2:-7525700 | None:intergenic |
| CTTTGTTCAATTGTGTCAAT+TGG | 0.290856 | 5_2:+7523614 | Msa0753920:CDS |
| ATTTGCTTTCAAAAGAAATA+GGG | 0.301513 | 5_2:-7523908 | None:intergenic |
| GCTGCTATTGCTATGCTAAT+TGG | 0.307008 | 5_2:+7523876 | Msa0753920:CDS |
| GTCTGAACTACCTTGTTATA+AGG | 0.329972 | 5_2:-7524859 | None:intergenic |
| TGATTATGATTGTAGCTCTA+AGG | 0.346847 | 5_2:+7525165 | Msa0753920:intron |
| TGCTTTGGTATCAAAGTAGA+TGG | 0.354413 | 5_2:-7525427 | None:intergenic |
| TCATCGGATAAAGTTGTAAA+AGG | 0.369541 | 5_2:-7525214 | None:intergenic |
| AAGCAAGGACAGCAGCCTTT+TGG | 0.374475 | 5_2:+7526237 | Msa0753920:CDS |
| CTTGCTTGTTACATAATCCT+TGG | 0.405156 | 5_2:-7526221 | None:intergenic |
| CCCTCCTAACTGCGTTCAAC+AGG | 0.405990 | 5_2:+7521894 | Msa0753920:CDS |
| CTGCATCAAGAATGACTTGA+TGG | 0.406438 | 5_2:-7523087 | None:intergenic |
| GTCACAGGTGCTAGGAAATC+TGG | 0.409006 | 5_2:+7526702 | Msa0753920:three_prime_UTR |
| ATAGAGGCTTTGCAACTTGT+TGG | 0.416177 | 5_2:-7525387 | None:intergenic |
| CTCATGATGGTGCGAGTAAA+GGG | 0.416361 | 5_2:+7522294 | Msa0753920:CDS |
| TCCAGACGACCAATCTGTTT+AGG | 0.418016 | 5_2:-7523029 | None:intergenic |
| TCCTAAACAGATTGGTCGTC+TGG | 0.418362 | 5_2:+7523028 | Msa0753920:CDS |
| TAGAGGCTTTGCAACTTGTT+GGG | 0.419718 | 5_2:-7525386 | None:intergenic |
| CATTGAAACACTGAAGCTAA+TGG | 0.420891 | 5_2:+7526183 | Msa0753920:CDS |
| GGATGCAAATGCTGCATAGA+TGG | 0.426955 | 5_2:-7525473 | None:intergenic |
| GTTACCTGTTGAACGCAGTT+AGG | 0.430235 | 5_2:-7521898 | None:intergenic |
| ATTCTTGATGCAGATCTTTG+AGG | 0.432466 | 5_2:+7523097 | Msa0753920:CDS |
| GATTCTTTCTCTTTGTTCAA+AGG | 0.434807 | 5_2:-7521816 | None:intergenic |
| ATTCCAACGTTCTTTGCTGC+TGG | 0.435491 | 5_2:-7521850 | None:intergenic |
| TACATGTTACCAACTTGCTT+TGG | 0.440980 | 5_2:-7525442 | None:intergenic |
| GTGAAGGGTAGTCTTTGTAT+TGG | 0.443511 | 5_2:+7526429 | Msa0753920:three_prime_UTR |
| TTTGATGCAGGAGGCATTGG+AGG | 0.446473 | 5_2:+7522271 | Msa0753920:intron |
| TTTCTCTTTGTTCAAAGGAA+AGG | 0.447066 | 5_2:-7521811 | None:intergenic |
| TCAAAAGAAATAGGGGCATC+AGG | 0.453354 | 5_2:-7523900 | None:intergenic |
| CAAATTGAGGGGAAGTCATA+TGG | 0.453589 | 5_2:+7523926 | Msa0753920:CDS |
| AAAGAGAAAGAATCAAGAAA+TGG | 0.460169 | 5_2:+7521825 | Msa0753920:exon |
| TCATAATAGTTGTGAAGCTC+TGG | 0.460821 | 5_2:+7526632 | Msa0753920:three_prime_UTR |
| GCTCCTCCGGTAGGTCGAGC+AGG | 0.463854 | 5_2:-7523852 | None:intergenic |
| AATTCATGGGATGGACGTTA+TGG | 0.464557 | 5_2:+7523646 | Msa0753920:CDS |
| AGCAATAGCAGCAGCTCCTC+CGG | 0.467184 | 5_2:-7523865 | None:intergenic |
| AGTAAAGGGAAATATACAAT+TGG | 0.468493 | 5_2:+7522308 | Msa0753920:CDS |
| TTTGTTCAATTGTGTCAATT+GGG | 0.489475 | 5_2:+7523615 | Msa0753920:CDS |
| TGTACCTTCTCATCGTATAG+AGG | 0.489750 | 5_2:-7525403 | None:intergenic |
| ATTGGGTGGAGAGCAATTCA+TGG | 0.491422 | 5_2:+7523632 | Msa0753920:CDS |
| CTTTCTCAGGTCTATGCTGA+AGG | 0.492679 | 5_2:+7523828 | Msa0753920:intron |
| ATGACGAGAGCTACCAAAGC+CGG | 0.493439 | 5_2:+7525233 | Msa0753920:CDS |
| TATGGAAATACTGATATTGA+AGG | 0.498987 | 5_2:+7523553 | Msa0753920:CDS |
| GCTCATGATGGTGCGAGTAA+AGG | 0.499177 | 5_2:+7522293 | Msa0753920:CDS |
| GAAGGTCCTGCTCGACCTAC+CGG | 0.502083 | 5_2:+7523846 | Msa0753920:CDS |
| TGGTCTTCAGCGACTTCTTG+AGG | 0.503836 | 5_2:+7525062 | Msa0753920:CDS |
| TTTCAGCAACATCCATCACT+TGG | 0.507070 | 5_2:-7525723 | None:intergenic |
| AGGAAAACATTGTGGCAGTT+AGG | 0.515627 | 5_2:-7525654 | None:intergenic |
| TCGGTGAGAAAGAATGTGCC+TGG | 0.516526 | 5_2:-7526262 | None:intergenic |
| TAGTTAAATGCGCAGACGGG+TGG | 0.518626 | 5_2:-7526757 | None:intergenic |
| TTTGCTTTCAAAAGAAATAG+GGG | 0.519392 | 5_2:-7523907 | None:intergenic |
| GCGACTTCTTGAGGAATCCC+AGG | 0.520791 | 5_2:+7525071 | Msa0753920:CDS |
| AGTGTTTCAATGAACTTCTG+TGG | 0.521063 | 5_2:-7526172 | None:intergenic |
| CCAAAGCCGGGATCTTGAAA+AGG | 0.524815 | 5_2:+7525246 | Msa0753920:CDS |
| ACCTGTTGAACGCAGTTAGG+AGG | 0.526299 | 5_2:-7521895 | None:intergenic |
| GGGTATTCACTAGCAAGGTC+AGG | 0.527013 | 5_2:-7523972 | None:intergenic |
| AAAAGTAAAGTGTCCTACCT+TGG | 0.527107 | 5_2:+7526732 | Msa0753920:three_prime_UTR |
| TTTAGTTTCACGTAATTGCA+AGG | 0.530355 | 5_2:-7525674 | None:intergenic |
| TCAACTAATGCTTGCTATGG+AGG | 0.531555 | 5_2:+7523583 | Msa0753920:CDS |
| TGCGCAGACGGGTGGGTCCA+AGG | 0.536129 | 5_2:-7526749 | None:intergenic |
| GCTCTGGAATATATCTCCAT+TGG | 0.539227 | 5_2:+7526648 | Msa0753920:three_prime_UTR |
| GATTCAACTAATGCTTGCTA+TGG | 0.539495 | 5_2:+7523580 | Msa0753920:CDS |
| ATATTATTCTCATACGGAAG+TGG | 0.541033 | 5_2:+7525631 | Msa0753920:CDS |
| GAGATCGATCCTAAACAGAT+TGG | 0.548622 | 5_2:+7523020 | Msa0753920:CDS |
| TGACGAGAGCTACCAAAGCC+GGG | 0.549767 | 5_2:+7525234 | Msa0753920:CDS |
| GGGAAATATACAATTGGACT+TGG | 0.552530 | 5_2:+7522314 | Msa0753920:CDS |
| GAGGTTACCAAAGAAAAGCT+TGG | 0.555142 | 5_2:+7525190 | Msa0753920:CDS |
| TGATTGTAGCTCTAAGGATG+AGG | 0.558354 | 5_2:+7525171 | Msa0753920:intron |
| GGTCACAGGCTCACAGTCAC+AGG | 0.563060 | 5_2:+7526687 | Msa0753920:three_prime_UTR |
| GTCAAACATTGCCCAAGTGA+TGG | 0.563325 | 5_2:+7525711 | Msa0753920:CDS |
| ACAGACAAACCGTTGACTGC+AGG | 0.565692 | 5_2:-7526343 | None:intergenic |
| AAGATAGTTAAATGCGCAGA+CGG | 0.565821 | 5_2:-7526761 | None:intergenic |
| ACTATCACTATCTATGCCAA+TGG | 0.567138 | 5_2:-7526664 | None:intergenic |
| CACTGAAGCTAATGGAACAT+AGG | 0.569121 | 5_2:+7526191 | Msa0753920:CDS |
| TGCATAGAATCTACGATACA+TGG | 0.569318 | 5_2:-7526293 | None:intergenic |
| GTCAACGGTTTGTCTGTCAA+TGG | 0.569594 | 5_2:+7526349 | Msa0753920:CDS |
| TGAATAAGAAAGAGTTGCCA+AGG | 0.573450 | 5_2:-7521748 | None:intergenic |
| TTCAGCAACATCCATCACTT+GGG | 0.574544 | 5_2:-7525722 | None:intergenic |
| CAGACGGGTGGGTCCAAGGT+AGG | 0.579149 | 5_2:-7526745 | None:intergenic |
| AAACAAACAAACAAACACCT+TGG | 0.580987 | 5_2:+7521731 | Msa0753920:five_prime_UTR |
| AGGGTGATATTATTCTCATA+CGG | 0.581841 | 5_2:+7525625 | Msa0753920:CDS |
| AGTTAAATGCGCAGACGGGT+GGG | 0.582146 | 5_2:-7526756 | None:intergenic |
| GGAACATAGGTATGGTGCCA+AGG | 0.583616 | 5_2:+7526204 | Msa0753920:CDS |
| AAGCTAATGGAACATAGGTA+TGG | 0.584877 | 5_2:+7526196 | Msa0753920:CDS |
| TTCACAAACATGTTACCTCA+TGG | 0.585332 | 5_2:+7524264 | Msa0753920:CDS |
| TAAGCTCCACATTGAGTGAA+GGG | 0.586328 | 5_2:+7526414 | Msa0753920:three_prime_UTR |
| CCTGTTGAACGCAGTTAGGA+GGG | 0.587798 | 5_2:-7521894 | None:intergenic |
| TTTGTGCTGTAGGTTGTCGA+CGG | 0.588804 | 5_2:+7524235 | Msa0753920:intron |
| CTACCTTGTTATAAGGAGAG+TGG | 0.592935 | 5_2:-7524852 | None:intergenic |
| GCTTTGGTAGCTCTCGTCAT+CGG | 0.595190 | 5_2:-7525230 | None:intergenic |
| AGAATGTGCCTGGAGCCAAA+AGG | 0.595474 | 5_2:-7526252 | None:intergenic |
| ACGATACATGGTATCAACTT+CGG | 0.595660 | 5_2:-7526281 | None:intergenic |
| ATTGGCATAGATAGTGATAG+TGG | 0.595667 | 5_2:+7526666 | Msa0753920:three_prime_UTR |
| AATTTGACTCCTGCAGTCAA+CGG | 0.595715 | 5_2:+7526334 | Msa0753920:CDS |
| GTGGAGAGCAATTCATGGGA+TGG | 0.595820 | 5_2:+7523637 | Msa0753920:CDS |
| TAGATAGTGATAGTGGTCAC+AGG | 0.596566 | 5_2:+7526673 | Msa0753920:three_prime_UTR |
| CAGATTGGTCGTCTGGAAGT+CGG | 0.598190 | 5_2:+7523035 | Msa0753920:CDS |
| TTAAGCTCCACATTGAGTGA+AGG | 0.599286 | 5_2:+7526413 | Msa0753920:three_prime_UTR |
| TTGGGTGGAGAGCAATTCAT+GGG | 0.604306 | 5_2:+7523633 | Msa0753920:CDS |
| AGATAGTTAAATGCGCAGAC+GGG | 0.609119 | 5_2:-7526760 | None:intergenic |
| GAGGCATTGGAGGCTCATGA+TGG | 0.614403 | 5_2:+7522281 | Msa0753920:CDS |
| ACTTTGATACCAAAGCAAGT+TGG | 0.615714 | 5_2:+7525433 | Msa0753920:CDS |
| GTTCAATTGTGTCAATTGGG+TGG | 0.616456 | 5_2:+7523618 | Msa0753920:CDS |
| GTTTCAATGAACTTCTGTGG+AGG | 0.619312 | 5_2:-7526169 | None:intergenic |
| ATTCCACTCTCCTTATAACA+AGG | 0.625771 | 5_2:+7524849 | Msa0753920:CDS |
| TGCAGATATGAGAAACACGA+GGG | 0.625881 | 5_2:+7524790 | Msa0753920:intron |
| AAAGCCTCTATACGATGAGA+AGG | 0.630768 | 5_2:+7525399 | Msa0753920:CDS |
| GGCTCACAGTCACAGGTGCT+AGG | 0.631640 | 5_2:+7526694 | Msa0753920:three_prime_UTR |
| GGTCCTGCTCGACCTACCGG+AGG | 0.636919 | 5_2:+7523849 | Msa0753920:CDS |
| TGACCTTGCTAGTGAATACC+CGG | 0.639253 | 5_2:+7523974 | Msa0753920:CDS |
| TTGCATCTGCAGTTTGACAG+TGG | 0.639309 | 5_2:+7522974 | Msa0753920:intron |
| TTACCGGGTATTCACTAGCA+AGG | 0.643611 | 5_2:-7523977 | None:intergenic |
| GCACCAGCAGCAAAGAACGT+TGG | 0.645271 | 5_2:+7521847 | Msa0753920:CDS |
| TTGAAGATGTCATCTCAATG+AGG | 0.649419 | 5_2:+7522366 | Msa0753920:CDS |
| AGACTACCCTTCACTCAATG+TGG | 0.649805 | 5_2:-7526420 | None:intergenic |
| CAAGGATTATGTAACAAGCA+AGG | 0.651946 | 5_2:+7526222 | Msa0753920:CDS |
| ATAGCAGCAGCTCCTCCGGT+AGG | 0.656075 | 5_2:-7523861 | None:intergenic |
| AAAGTTGAAGTCAAGACATG+AGG | 0.659927 | 5_2:+7525744 | Msa0753920:CDS |
| TTGCAGATATGAGAAACACG+AGG | 0.684755 | 5_2:+7524789 | Msa0753920:intron |
| TAATTGCAAGGAAAACATTG+TGG | 0.695304 | 5_2:-7525662 | None:intergenic |
| ATTGACACAATTGAACAAAG+CGG | 0.706527 | 5_2:-7523611 | None:intergenic |
| AAATGCTGCATAGATGGACG+CGG | 0.723317 | 5_2:-7525467 | None:intergenic |
| AGCAAGTATCAAGAGCCATG+AGG | 0.727431 | 5_2:-7524279 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTAAGTCT+TGG | + | chr5_2:7522808-7522827 | Msa0753920:intron | 10.0% |
| !!! | TATTTATTTATTTTTTTGTC+TGG | + | chr5_2:7523518-7523537 | Msa0753920:intron | 10.0% |
| !! | TTGAAAAATATTAATTAACT+AGG | + | chr5_2:7524367-7524386 | Msa0753920:intron | 10.0% |
| !! | TGAAAAATATTAATTAACTA+GGG | + | chr5_2:7524368-7524387 | Msa0753920:intron | 10.0% |
| !!! | AGTCAAAAATTTATATTTTT+AGG | + | chr5_2:7526564-7526583 | Msa0753920:three_prime_UTR | 10.0% |
| !! | ATTTAATGATTAGGAAATAA+CGG | - | chr5_2:7522005-7522024 | None:intergenic | 15.0% |
| !! | GTAGAATTAATTTAATGATT+AGG | - | chr5_2:7522014-7522033 | None:intergenic | 15.0% |
| !! | AATCATTAAATTAATTCTAC+TGG | + | chr5_2:7522014-7522033 | Msa0753920:intron | 15.0% |
| !!! | GTTTTTTCACTTTTTAATTA+AGG | + | chr5_2:7522235-7522254 | Msa0753920:intron | 15.0% |
| !! | AAAAAAAAAAAAAAAATCCC+AGG | - | chr5_2:7522801-7522820 | None:intergenic | 15.0% |
| !! | GAAAAATATTAATTAACTAG+GGG | + | chr5_2:7524369-7524388 | Msa0753920:intron | 15.0% |
| !! | AAAAATATTAATTAACTAGG+GGG | + | chr5_2:7524370-7524389 | Msa0753920:intron | 15.0% |
| !! | CAAAAACATAATTAGATATT+TGG | - | chr5_2:7524772-7524791 | None:intergenic | 15.0% |
| !! | ATGATTGTAATTTAGTATTT+CGG | + | chr5_2:7524979-7524998 | Msa0753920:intron | 15.0% |
| !!! | TACAATGTTATTTATTTTGA+AGG | + | chr5_2:7525360-7525379 | Msa0753920:intron | 15.0% |
| !! | GTAAATATTTATTAGAAAAC+AGG | - | chr5_2:7525580-7525599 | None:intergenic | 15.0% |
| !! | AAAAGTGAAAAAACAAAAAG+AGG | - | chr5_2:7522229-7522248 | None:intergenic | 20.0% |
| !!! | TTTAATTTTGTTTTTGATGC+AGG | + | chr5_2:7522259-7522278 | Msa0753920:intron | 20.0% |
| !! | AATCATCAAGAAATAAGATT+AGG | - | chr5_2:7522950-7522969 | None:intergenic | 20.0% |
| !! | AGTTTAAATACTCAAAACTA+AGG | - | chr5_2:7523221-7523240 | None:intergenic | 20.0% |
| !!! | TAGTTTTGAGTATTTAAACT+TGG | + | chr5_2:7523221-7523240 | Msa0753920:intron | 20.0% |
| !! | AGGTTTATTATTACTGAATA+TGG | - | chr5_2:7523732-7523751 | None:intergenic | 20.0% |
| !!! | AATTTTTTAGTTCAGAATCA+AGG | - | chr5_2:7523752-7523771 | None:intergenic | 20.0% |
| !! | ATTTGCTTTCAAAAGAAATA+GGG | - | chr5_2:7523911-7523930 | None:intergenic | 20.0% |
| !!! | AATTTGCTTTCAAAAGAAAT+AGG | - | chr5_2:7523912-7523931 | None:intergenic | 20.0% |
| !! | ACAATAAAAAATTTCACCAA+AGG | - | chr5_2:7524487-7524506 | None:intergenic | 20.0% |
| !!! | AAAATTAAAAAGTTTTCCAG+AGG | - | chr5_2:7525115-7525134 | None:intergenic | 20.0% |
| !!! | TTTTTATTCAGTTAATGCAT+AGG | + | chr5_2:7525131-7525150 | Msa0753920:intron | 20.0% |
| ! | AAAGAGAAAGAATCAAGAAA+TGG | + | chr5_2:7521825-7521844 | Msa0753920:exon | 25.0% |
| ! | TAATGTCAGTCATATTAATG+TGG | + | chr5_2:7522111-7522130 | Msa0753920:intron | 25.0% |
| ! | AGTAAAGGGAAATATACAAT+TGG | + | chr5_2:7522308-7522327 | Msa0753920:CDS | 25.0% |
| !!! | AGGTTTCTTTCTTGTTTTTT+TGG | + | chr5_2:7522386-7522405 | Msa0753920:intron | 25.0% |
| !!! | TTTTGGCTGTATATTATGTT+TGG | + | chr5_2:7522403-7522422 | Msa0753920:intron | 25.0% |
| ! | AAAATTAAAACACCTTGACA+AGG | - | chr5_2:7522723-7522742 | None:intergenic | 25.0% |
| !!! | TGAAAAGTATTTTAACTCCT+GGG | + | chr5_2:7522781-7522800 | Msa0753920:intron | 25.0% |
| ! | ATGTGTGTTTAATGTTTGAT+AGG | + | chr5_2:7522879-7522898 | Msa0753920:intron | 25.0% |
| ! | AATGTCAATTTAGTACCTAT+TGG | + | chr5_2:7523187-7523206 | Msa0753920:intron | 25.0% |
| ! | TTCACTCTCTGATATATTAT+AGG | + | chr5_2:7523402-7523421 | Msa0753920:intron | 25.0% |
| ! | GTTAGTGTTAATAATCAGAT+TGG | + | chr5_2:7523430-7523449 | Msa0753920:intron | 25.0% |
| ! | TGTTAATAATCAGATTGGAT+TGG | + | chr5_2:7523435-7523454 | Msa0753920:intron | 25.0% |
| ! | ATTGTATTAGAAAGCTATGT+AGG | - | chr5_2:7523499-7523518 | None:intergenic | 25.0% |
| ! | TATGGAAATACTGATATTGA+AGG | + | chr5_2:7523553-7523572 | Msa0753920:CDS | 25.0% |
| ! | TTTGTTCAATTGTGTCAATT+GGG | + | chr5_2:7523615-7523634 | Msa0753920:CDS | 25.0% |
| ! | TTTGCTTTCAAAAGAAATAG+GGG | - | chr5_2:7523910-7523929 | None:intergenic | 25.0% |
| !!! | TTTCTTTTGAAAGCAAATTG+AGG | + | chr5_2:7523913-7523932 | Msa0753920:CDS | 25.0% |
| !!! | TTCTTTTGAAAGCAAATTGA+GGG | + | chr5_2:7523914-7523933 | Msa0753920:CDS | 25.0% |
| !! | TTGTCAGAACATTTTACTTT+GGG | + | chr5_2:7524029-7524048 | Msa0753920:intron | 25.0% |
| ! | TGGAGATTTATTTGTACATT+AGG | + | chr5_2:7524583-7524602 | Msa0753920:intron | 25.0% |
| ! | AGTCTTAGTTAGTACAAATT+TGG | - | chr5_2:7524713-7524732 | None:intergenic | 25.0% |
| ! | AAGTATATAGAGCATATACA+GGG | - | chr5_2:7524933-7524952 | None:intergenic | 25.0% |
| ! | AAAGTATATAGAGCATATAC+AGG | - | chr5_2:7524934-7524953 | None:intergenic | 25.0% |
| ! | TGTCTGACTAAAAAATGATA+TGG | + | chr5_2:7524956-7524975 | Msa0753920:intron | 25.0% |
| !! | ATTTACGCCTTAAAATTTTC+AGG | + | chr5_2:7525594-7525613 | Msa0753920:intron | 25.0% |
| !! | TTACCTTCCTGAAAATTTTA+AGG | - | chr5_2:7525604-7525623 | None:intergenic | 25.0% |
| !!! | AAAAATTTTGAAGCCTCAAA+AGG | + | chr5_2:7525994-7526013 | Msa0753920:intron | 25.0% |
| !! | AAACAATCTAAATCCTTTTG+AGG | - | chr5_2:7526010-7526029 | None:intergenic | 25.0% |
| ! | CTAACATATTGACATACTAT+AGG | - | chr5_2:7526044-7526063 | None:intergenic | 25.0% |
| ! | GTTAGAGTTTATTAAAATGC+TGG | + | chr5_2:7526059-7526078 | Msa0753920:intron | 25.0% |
| !! | CTTCAACGTAACATTTTAAA+GGG | - | chr5_2:7526546-7526565 | None:intergenic | 25.0% |
| !! | ACTTCAACGTAACATTTTAA+AGG | - | chr5_2:7526547-7526566 | None:intergenic | 25.0% |
| AAACAAACAAACAAACACCT+TGG | + | chr5_2:7521731-7521750 | Msa0753920:five_prime_UTR | 30.0% | |
| TTTCTCTTTGTTCAAAGGAA+AGG | - | chr5_2:7521814-7521833 | None:intergenic | 30.0% | |
| GATTCTTTCTCTTTGTTCAA+AGG | - | chr5_2:7521819-7521838 | None:intergenic | 30.0% | |
| TGAAGAATCTTAAGAAGAAG+CGG | - | chr5_2:7521930-7521949 | None:intergenic | 30.0% | |
| TAATGATTAGGAAATAACGG+TGG | - | chr5_2:7522002-7522021 | None:intergenic | 30.0% | |
| !!! | AATTTTGTTTTTGATGCAGG+AGG | + | chr5_2:7522262-7522281 | Msa0753920:intron | 30.0% |
| CTCAGATTATTATTAGTGTC+TGG | - | chr5_2:7522477-7522496 | None:intergenic | 30.0% | |
| !! | GATTTGATTTGTCATCATTG+AGG | + | chr5_2:7522639-7522658 | Msa0753920:intron | 30.0% |
| TCATTGAGGAACATGTAAAT+TGG | + | chr5_2:7522653-7522672 | Msa0753920:intron | 30.0% | |
| ! | GAACATGTAAATTGGTGATT+TGG | + | chr5_2:7522661-7522680 | Msa0753920:intron | 30.0% |
| TTGGTAAATACAACTCATGA+TGG | + | chr5_2:7522680-7522699 | Msa0753920:intron | 30.0% | |
| ! | AACCATTTAAAACCTTGTCA+AGG | + | chr5_2:7522708-7522727 | Msa0753920:intron | 30.0% |
| !!! | GTGAAAAGTATTTTAACTCC+TGG | + | chr5_2:7522780-7522799 | Msa0753920:intron | 30.0% |
| ! | CTTTTCATTGTCTAACCATT+TGG | + | chr5_2:7523123-7523142 | Msa0753920:intron | 30.0% |
| ACTAAGGTTTAATCACCAAT+AGG | - | chr5_2:7523205-7523224 | None:intergenic | 30.0% | |
| CTCTGATATATTATAGGATG+TGG | + | chr5_2:7523408-7523427 | Msa0753920:intron | 30.0% | |
| ATTGACACAATTGAACAAAG+CGG | - | chr5_2:7523614-7523633 | None:intergenic | 30.0% | |
| CTTTGTTCAATTGTGTCAAT+TGG | + | chr5_2:7523614-7523633 | Msa0753920:CDS | 30.0% | |
| TCTAGAGGCAACATATAATT+AGG | - | chr5_2:7523709-7523728 | None:intergenic | 30.0% | |
| TATTACTGAATATGGTCTAG+AGG | - | chr5_2:7523724-7523743 | None:intergenic | 30.0% | |
| GAACTAAAAAATTCATGTCC+TGG | + | chr5_2:7523759-7523778 | Msa0753920:intron | 30.0% | |
| TTCTATGACTATCACAATGT+TGG | + | chr5_2:7523783-7523802 | Msa0753920:intron | 30.0% | |
| TCTATGACTATCACAATGTT+GGG | + | chr5_2:7523784-7523803 | Msa0753920:intron | 30.0% | |
| !! | TCTTTTGAAAGCAAATTGAG+GGG | + | chr5_2:7523915-7523934 | Msa0753920:CDS | 30.0% |
| !! | AAATGGATTGAAAAGCTTAC+CGG | - | chr5_2:7523996-7524015 | None:intergenic | 30.0% |
| ACAAGTGACAACAATGAAAA+TGG | - | chr5_2:7524013-7524032 | None:intergenic | 30.0% | |
| ! | CTTGTCAGAACATTTTACTT+TGG | + | chr5_2:7524028-7524047 | Msa0753920:intron | 30.0% |
| CATCACAAGAGAAAAACAAT+TGG | - | chr5_2:7524079-7524098 | None:intergenic | 30.0% | |
| AAAGCCAAATTAAAGTTGCA+AGG | - | chr5_2:7524112-7524131 | None:intergenic | 30.0% | |
| AACAACAATGTTATCCTTCA+TGG | - | chr5_2:7524141-7524160 | None:intergenic | 30.0% | |
| AATATTAATTAACTAGGGGG+TGG | + | chr5_2:7524373-7524392 | Msa0753920:intron | 30.0% | |
| TTCCAATTCTTAAATGAGGT+CGG | + | chr5_2:7524525-7524544 | Msa0753920:intron | 30.0% | |
| ! | TAAATCTCCATTTTCACCAA+AGG | - | chr5_2:7524573-7524592 | None:intergenic | 30.0% |
| CAAATTTGGAAAGAGGATTA+AGG | - | chr5_2:7524699-7524718 | None:intergenic | 30.0% | |
| GTTAGTACAAATTTGGAAAG+AGG | - | chr5_2:7524706-7524725 | None:intergenic | 30.0% | |
| ! | TTAAAAAGTTTTCCAGAGGA+TGG | - | chr5_2:7525111-7525130 | None:intergenic | 30.0% |
| ! | TGATTATGATTGTAGCTCTA+AGG | + | chr5_2:7525165-7525184 | Msa0753920:intron | 30.0% |
| TCATCGGATAAAGTTGTAAA+AGG | - | chr5_2:7525217-7525236 | None:intergenic | 30.0% | |
| !!! | GCTATTTTTGTTGTGAAGAA+GGG | - | chr5_2:7525497-7525516 | None:intergenic | 30.0% |
| !!! | AGCTATTTTTGTTGTGAAGA+AGG | - | chr5_2:7525498-7525517 | None:intergenic | 30.0% |
| GCTATATATGTCATAGATAG+TGG | - | chr5_2:7525539-7525558 | None:intergenic | 30.0% | |
| TTATTAGAAAACAGGCAACA+TGG | - | chr5_2:7525572-7525591 | None:intergenic | 30.0% | |
| !! | AAAATTTTCAGGAAGGTAAG+AGG | + | chr5_2:7525605-7525624 | Msa0753920:intron | 30.0% |
| !! | AAATTTTCAGGAAGGTAAGA+GGG | + | chr5_2:7525606-7525625 | Msa0753920:intron | 30.0% |
| AGGGTGATATTATTCTCATA+CGG | + | chr5_2:7525625-7525644 | Msa0753920:CDS | 30.0% | |
| ATATTATTCTCATACGGAAG+TGG | + | chr5_2:7525631-7525650 | Msa0753920:CDS | 30.0% | |
| TAATTGCAAGGAAAACATTG+TGG | - | chr5_2:7525665-7525684 | None:intergenic | 30.0% | |
| ! | TTTAGTTTCACGTAATTGCA+AGG | - | chr5_2:7525677-7525696 | None:intergenic | 30.0% |
| GCAATGTTTGACAAACTAAA+TGG | - | chr5_2:7525703-7525722 | None:intergenic | 30.0% | |
| CATATCTGACTAGATGTTTA+TGG | - | chr5_2:7525777-7525796 | None:intergenic | 30.0% | |
| ! | TGAGGCTTCAAAATTTTTGT+AGG | - | chr5_2:7525992-7526011 | None:intergenic | 30.0% |
| TCTATGCAACGAACAATAAA+TGG | + | chr5_2:7526388-7526407 | Msa0753920:three_prime_UTR | 30.0% | |
| !!! | TCTTTGTATTGGTTTTGCAA+GGG | + | chr5_2:7526440-7526459 | Msa0753920:three_prime_UTR | 30.0% |
| !!! | AGGACACTTTACTTTTTGAA+AGG | - | chr5_2:7526728-7526747 | None:intergenic | 30.0% |
| TGAATAAGAAAGAGTTGCCA+AGG | - | chr5_2:7521751-7521770 | None:intergenic | 35.0% | |
| !! | CGTGATTAGCTTAATGAAGA+TGG | - | chr5_2:7521959-7521978 | None:intergenic | 35.0% |
| GGGAAATATACAATTGGACT+TGG | + | chr5_2:7522314-7522333 | Msa0753920:CDS | 35.0% | |
| TTGAAGATGTCATCTCAATG+AGG | + | chr5_2:7522366-7522385 | Msa0753920:CDS | 35.0% | |
| TAAGCATGTGACATGAGATT+TGG | + | chr5_2:7522574-7522593 | Msa0753920:intron | 35.0% | |
| !!! | CACCTTGACAAGGTTTTAAA+TGG | - | chr5_2:7522713-7522732 | None:intergenic | 35.0% |
| ACATTAAACACACATACAGC+AGG | - | chr5_2:7522874-7522893 | None:intergenic | 35.0% | |
| ATTCTTGATGCAGATCTTTG+AGG | + | chr5_2:7523097-7523116 | Msa0753920:CDS | 35.0% | |
| CTTTACATGAAAACAGTCAC+TGG | - | chr5_2:7523368-7523387 | None:intergenic | 35.0% | |
| ! | GTCTGGAACAAACAGAAATA+TGG | + | chr5_2:7523535-7523554 | Msa0753920:intron | 35.0% |
| ! | GATTCAACTAATGCTTGCTA+TGG | + | chr5_2:7523580-7523599 | Msa0753920:CDS | 35.0% |
| TTGTGATAGTCATAGAATCC+AGG | - | chr5_2:7523780-7523799 | None:intergenic | 35.0% | |
| CTATGACTATCACAATGTTG+GGG | + | chr5_2:7523785-7523804 | Msa0753920:intron | 35.0% | |
| CAATCAATGCTTACTTTCTC+AGG | + | chr5_2:7523815-7523834 | Msa0753920:intron | 35.0% | |
| !! | AATGGATTGAAAAGCTTACC+GGG | - | chr5_2:7523995-7524014 | None:intergenic | 35.0% |
| GCATCCTTGCAACTTTAATT+TGG | + | chr5_2:7524105-7524124 | Msa0753920:intron | 35.0% | |
| ATGACGTAGAAGTAAAGAAC+AGG | - | chr5_2:7524168-7524187 | None:intergenic | 35.0% | |
| TTCACAAACATGTTACCTCA+TGG | + | chr5_2:7524264-7524283 | Msa0753920:CDS | 35.0% | |
| AAAAAATTTCACCAAAGGCC+AGG | - | chr5_2:7524482-7524501 | None:intergenic | 35.0% | |
| CGAGTTCCAATTCTTAAATG+AGG | + | chr5_2:7524521-7524540 | Msa0753920:intron | 35.0% | |
| TTCCGACCTCATTTAAGAAT+TGG | - | chr5_2:7524530-7524549 | None:intergenic | 35.0% | |
| ! | ATTTTCACCAAAGGACACAT+TGG | - | chr5_2:7524564-7524583 | None:intergenic | 35.0% |
| AATGTGTCCTTTGGTGAAAA+TGG | + | chr5_2:7524563-7524582 | Msa0753920:intron | 35.0% | |
| GACTTAGCTCAAATCAACAA+TGG | + | chr5_2:7524653-7524672 | Msa0753920:intron | 35.0% | |
| ATTCCACTCTCCTTATAACA+AGG | + | chr5_2:7524849-7524868 | Msa0753920:CDS | 35.0% | |
| ! | GTCTGAACTACCTTGTTATA+AGG | - | chr5_2:7524862-7524881 | None:intergenic | 35.0% |
| !! | ACAGGGAGCATTATTATCAT+TGG | - | chr5_2:7524916-7524935 | None:intergenic | 35.0% |
| ! | GCAAAAAAGTTTTGCTCGTT+TGG | + | chr5_2:7525042-7525061 | Msa0753920:CDS | 35.0% |
| TGGATAAATGATGAGAACCT+GGG | - | chr5_2:7525091-7525110 | None:intergenic | 35.0% | |
| ATGGATAAATGATGAGAACC+TGG | - | chr5_2:7525092-7525111 | None:intergenic | 35.0% | |
| ! | AAAAGGTCCAAGCTTTTCTT+TGG | - | chr5_2:7525200-7525219 | None:intergenic | 35.0% |
| TGCTTTGGTATCAAAGTAGA+TGG | - | chr5_2:7525430-7525449 | None:intergenic | 35.0% | |
| ACTTTGATACCAAAGCAAGT+TGG | + | chr5_2:7525433-7525452 | Msa0753920:CDS | 35.0% | |
| ! | TACATGTTACCAACTTGCTT+TGG | - | chr5_2:7525445-7525464 | None:intergenic | 35.0% |
| TCACAACAAAAATAGCTCAC+TGG | + | chr5_2:7525501-7525520 | Msa0753920:CDS | 35.0% | |
| !! | ACGCCTTAAAATTTTCAGGA+AGG | + | chr5_2:7525598-7525617 | Msa0753920:intron | 35.0% |
| AAAGTTGAAGTCAAGACATG+AGG | + | chr5_2:7525744-7525763 | Msa0753920:CDS | 35.0% | |
| AAACGAACAGAGATACAGAT+TGG | + | chr5_2:7525928-7525947 | Msa0753920:intron | 35.0% | |
| ! | TTTGTAGGAGCACAACTAAA+AGG | - | chr5_2:7525977-7525996 | None:intergenic | 35.0% |
| AGTGTTTCAATGAACTTCTG+TGG | - | chr5_2:7526175-7526194 | None:intergenic | 35.0% | |
| CATTGAAACACTGAAGCTAA+TGG | + | chr5_2:7526183-7526202 | Msa0753920:CDS | 35.0% | |
| ! | CTTGCTTGTTACATAATCCT+TGG | - | chr5_2:7526224-7526243 | None:intergenic | 35.0% |
| CAAGGATTATGTAACAAGCA+AGG | + | chr5_2:7526222-7526241 | Msa0753920:CDS | 35.0% | |
| ACGATACATGGTATCAACTT+CGG | - | chr5_2:7526284-7526303 | None:intergenic | 35.0% | |
| TGCATAGAATCTACGATACA+TGG | - | chr5_2:7526296-7526315 | None:intergenic | 35.0% | |
| !!! | GTCTTTGTATTGGTTTTGCA+AGG | + | chr5_2:7526439-7526458 | Msa0753920:three_prime_UTR | 35.0% |
| TCATAATAGTTGTGAAGCTC+TGG | + | chr5_2:7526632-7526651 | Msa0753920:three_prime_UTR | 35.0% | |
| ACTATCACTATCTATGCCAA+TGG | - | chr5_2:7526667-7526686 | None:intergenic | 35.0% | |
| ATTGGCATAGATAGTGATAG+TGG | + | chr5_2:7526666-7526685 | Msa0753920:three_prime_UTR | 35.0% | |
| ! | AAAAGTAAAGTGTCCTACCT+TGG | + | chr5_2:7526732-7526751 | Msa0753920:three_prime_UTR | 35.0% |
| AAGATAGTTAAATGCGCAGA+CGG | - | chr5_2:7526764-7526783 | None:intergenic | 35.0% | |
| TCTCATGTCACATGCTTATC+CGG | - | chr5_2:7522572-7522591 | None:intergenic | 40.0% | |
| GAGATCGATCCTAAACAGAT+TGG | + | chr5_2:7523020-7523039 | Msa0753920:CDS | 40.0% | |
| CTGCATCAAGAATGACTTGA+TGG | - | chr5_2:7523090-7523109 | None:intergenic | 40.0% | |
| GCGAGAATCACATATCCAAA+TGG | - | chr5_2:7523141-7523160 | None:intergenic | 40.0% | |
| TACTACTAAGGTTACGGCAT+CGG | - | chr5_2:7523341-7523360 | None:intergenic | 40.0% | |
| !! | TCAACTAATGCTTGCTATGG+AGG | + | chr5_2:7523583-7523602 | Msa0753920:CDS | 40.0% |
| GTTCAATTGTGTCAATTGGG+TGG | + | chr5_2:7523618-7523637 | Msa0753920:CDS | 40.0% | |
| AATTCATGGGATGGACGTTA+TGG | + | chr5_2:7523646-7523665 | Msa0753920:CDS | 40.0% | |
| GCTGCTATTGCTATGCTAAT+TGG | + | chr5_2:7523876-7523895 | Msa0753920:CDS | 40.0% | |
| !! | TCAAAAGAAATAGGGGCATC+AGG | - | chr5_2:7523903-7523922 | None:intergenic | 40.0% |
| CAAATTGAGGGGAAGTCATA+TGG | + | chr5_2:7523926-7523945 | Msa0753920:CDS | 40.0% | |
| !! | TTGGCTTTGATATGCCATGA+AGG | + | chr5_2:7524124-7524143 | Msa0753920:intron | 40.0% |
| TCATCCACATGTAGCATTTC+AGG | + | chr5_2:7524184-7524203 | Msa0753920:intron | 40.0% | |
| GTATCCTGAAATGCTACATG+TGG | - | chr5_2:7524191-7524210 | None:intergenic | 40.0% | |
| TCATGTGGATTTAGTGCACT+TGG | - | chr5_2:7524213-7524232 | None:intergenic | 40.0% | |
| CCTACAGCACAAAAATCATG+TGG | - | chr5_2:7524228-7524247 | None:intergenic | 40.0% | |
| ! | CCACATGATTTTTGTGCTGT+AGG | + | chr5_2:7524225-7524244 | Msa0753920:intron | 40.0% |
| TCTTAAATGAGGTCGGAAAC+CGG | + | chr5_2:7524532-7524551 | Msa0753920:intron | 40.0% | |
| TTGCAGATATGAGAAACACG+AGG | + | chr5_2:7524789-7524808 | Msa0753920:intron | 40.0% | |
| TGCAGATATGAGAAACACGA+GGG | + | chr5_2:7524790-7524809 | Msa0753920:intron | 40.0% | |
| ! | CTACCTTGTTATAAGGAGAG+TGG | - | chr5_2:7524855-7524874 | None:intergenic | 40.0% |
| CTCATCATTTATCCATCCTC+TGG | + | chr5_2:7525096-7525115 | Msa0753920:intron | 40.0% | |
| !! | TGATTGTAGCTCTAAGGATG+AGG | + | chr5_2:7525171-7525190 | Msa0753920:intron | 40.0% |
| GAGGTTACCAAAGAAAAGCT+TGG | + | chr5_2:7525190-7525209 | Msa0753920:CDS | 40.0% | |
| !! | CACATACCTTTTCAAGATCC+CGG | - | chr5_2:7525255-7525274 | None:intergenic | 40.0% |
| ! | TAGAGGCTTTGCAACTTGTT+GGG | - | chr5_2:7525389-7525408 | None:intergenic | 40.0% |
| ATAGAGGCTTTGCAACTTGT+TGG | - | chr5_2:7525390-7525409 | None:intergenic | 40.0% | |
| AAAGCCTCTATACGATGAGA+AGG | + | chr5_2:7525399-7525418 | Msa0753920:CDS | 40.0% | |
| TGTACCTTCTCATCGTATAG+AGG | - | chr5_2:7525406-7525425 | None:intergenic | 40.0% | |
| AGGAAAACATTGTGGCAGTT+AGG | - | chr5_2:7525657-7525676 | None:intergenic | 40.0% | |
| TTCAGCAACATCCATCACTT+GGG | - | chr5_2:7525725-7525744 | None:intergenic | 40.0% | |
| TTTCAGCAACATCCATCACT+TGG | - | chr5_2:7525726-7525745 | None:intergenic | 40.0% | |
| GTTTCAATGAACTTCTGTGG+AGG | - | chr5_2:7526172-7526191 | None:intergenic | 40.0% | |
| CACTGAAGCTAATGGAACAT+AGG | + | chr5_2:7526191-7526210 | Msa0753920:CDS | 40.0% | |
| AATTTGACTCCTGCAGTCAA+CGG | + | chr5_2:7526334-7526353 | Msa0753920:CDS | 40.0% | |
| TTAAGCTCCACATTGAGTGA+AGG | + | chr5_2:7526413-7526432 | Msa0753920:three_prime_UTR | 40.0% | |
| TAAGCTCCACATTGAGTGAA+GGG | + | chr5_2:7526414-7526433 | Msa0753920:three_prime_UTR | 40.0% | |
| GTGAAGGGTAGTCTTTGTAT+TGG | + | chr5_2:7526429-7526448 | Msa0753920:three_prime_UTR | 40.0% | |
| !! | GCTCTGGAATATATCTCCAT+TGG | + | chr5_2:7526648-7526667 | Msa0753920:three_prime_UTR | 40.0% |
| !! | TAGATAGTGATAGTGGTCAC+AGG | + | chr5_2:7526673-7526692 | Msa0753920:three_prime_UTR | 40.0% |
| AGATAGTTAAATGCGCAGAC+GGG | - | chr5_2:7526763-7526782 | None:intergenic | 40.0% | |
| ATTCCAACGTTCTTTGCTGC+TGG | - | chr5_2:7521853-7521872 | None:intergenic | 45.0% | |
| GTTACCTGTTGAACGCAGTT+AGG | - | chr5_2:7521901-7521920 | None:intergenic | 45.0% | |
| !! | GTTTTTGATGCAGGAGGCAT+TGG | + | chr5_2:7522268-7522287 | Msa0753920:intron | 45.0% |
| ! | CTCATGATGGTGCGAGTAAA+GGG | + | chr5_2:7522294-7522313 | Msa0753920:CDS | 45.0% |
| TTGCATCTGCAGTTTGACAG+TGG | + | chr5_2:7522974-7522993 | Msa0753920:intron | 45.0% | |
| ! | TCCTAAACAGATTGGTCGTC+TGG | + | chr5_2:7523028-7523047 | Msa0753920:CDS | 45.0% |
| TCCAGACGACCAATCTGTTT+AGG | - | chr5_2:7523032-7523051 | None:intergenic | 45.0% | |
| GTGATTCTCGCTGTCAATGT+AGG | + | chr5_2:7523150-7523169 | Msa0753920:intron | 45.0% | |
| ACTACTAAGGTTACGGCATC+GGG | - | chr5_2:7523340-7523359 | None:intergenic | 45.0% | |
| GGTCGCTACTACTAAGGTTA+CGG | - | chr5_2:7523347-7523366 | None:intergenic | 45.0% | |
| ATTGGGTGGAGAGCAATTCA+TGG | + | chr5_2:7523632-7523651 | Msa0753920:CDS | 45.0% | |
| TTGGGTGGAGAGCAATTCAT+GGG | + | chr5_2:7523633-7523652 | Msa0753920:CDS | 45.0% | |
| CTTTCTCAGGTCTATGCTGA+AGG | + | chr5_2:7523828-7523847 | Msa0753920:intron | 45.0% | |
| TGACCTTGCTAGTGAATACC+CGG | + | chr5_2:7523974-7523993 | Msa0753920:CDS | 45.0% | |
| TTACCGGGTATTCACTAGCA+AGG | - | chr5_2:7523980-7523999 | None:intergenic | 45.0% | |
| TTTGTGCTGTAGGTTGTCGA+CGG | + | chr5_2:7524235-7524254 | Msa0753920:intron | 45.0% | |
| AGCAAGTATCAAGAGCCATG+AGG | - | chr5_2:7524282-7524301 | None:intergenic | 45.0% | |
| AAATGCTGCATAGATGGACG+CGG | - | chr5_2:7525470-7525489 | None:intergenic | 45.0% | |
| GGATGCAAATGCTGCATAGA+TGG | - | chr5_2:7525476-7525495 | None:intergenic | 45.0% | |
| GTCAAACATTGCCCAAGTGA+TGG | + | chr5_2:7525711-7525730 | Msa0753920:CDS | 45.0% | |
| GTCAACGGTTTGTCTGTCAA+TGG | + | chr5_2:7526349-7526368 | Msa0753920:CDS | 45.0% | |
| AGACTACCCTTCACTCAATG+TGG | - | chr5_2:7526423-7526442 | None:intergenic | 45.0% | |
| !!! | TTTTTTTTTAATTAGAAAAA+AGG | + | chr5_2:7522154-7522173 | Msa0753920:intron | 5.0% |
| CCTGTTGAACGCAGTTAGGA+GGG | - | chr5_2:7521897-7521916 | None:intergenic | 50.0% | |
| ACCTGTTGAACGCAGTTAGG+AGG | - | chr5_2:7521898-7521917 | None:intergenic | 50.0% | |
| !! | TTTGATGCAGGAGGCATTGG+AGG | + | chr5_2:7522271-7522290 | Msa0753920:intron | 50.0% |
| ! | GCTCATGATGGTGCGAGTAA+AGG | + | chr5_2:7522293-7522312 | Msa0753920:CDS | 50.0% |
| CACATGTGTCAGTGTCGTGT+TGG | + | chr5_2:7522520-7522539 | Msa0753920:intron | 50.0% | |
| ! | TGTCAGTGTCGTGTTGGTGT+CGG | + | chr5_2:7522526-7522545 | Msa0753920:intron | 50.0% |
| CACTGAGACGTGTCAAACAC+CGG | + | chr5_2:7522550-7522569 | Msa0753920:intron | 50.0% | |
| ! | CAGATTGGTCGTCTGGAAGT+CGG | + | chr5_2:7523035-7523054 | Msa0753920:CDS | 50.0% |
| GTCACTGGTCGCTACTACTA+AGG | - | chr5_2:7523353-7523372 | None:intergenic | 50.0% | |
| GTGGAGAGCAATTCATGGGA+TGG | + | chr5_2:7523637-7523656 | Msa0753920:CDS | 50.0% | |
| GGGTATTCACTAGCAAGGTC+AGG | - | chr5_2:7523975-7523994 | None:intergenic | 50.0% | |
| ! | GATGCAAGTTGAGTCTGACC+TGG | + | chr5_2:7524456-7524475 | Msa0753920:intron | 50.0% |
| TCACCAAAGGACACATTGGC+AGG | - | chr5_2:7524560-7524579 | None:intergenic | 50.0% | |
| TGGTCTTCAGCGACTTCTTG+AGG | + | chr5_2:7525062-7525081 | Msa0753920:CDS | 50.0% | |
| ! | GCTTTGGTAGCTCTCGTCAT+CGG | - | chr5_2:7525233-7525252 | None:intergenic | 50.0% |
| ATGACGAGAGCTACCAAAGC+CGG | + | chr5_2:7525233-7525252 | Msa0753920:CDS | 50.0% | |
| !! | CCTTTTCAAGATCCCGGCTT+TGG | - | chr5_2:7525249-7525268 | None:intergenic | 50.0% |
| CCAAAGCCGGGATCTTGAAA+AGG | + | chr5_2:7525246-7525265 | Msa0753920:CDS | 50.0% | |
| ! | AAGCAAGGACAGCAGCCTTT+TGG | + | chr5_2:7526237-7526256 | Msa0753920:CDS | 50.0% |
| AGAATGTGCCTGGAGCCAAA+AGG | - | chr5_2:7526255-7526274 | None:intergenic | 50.0% | |
| TCGGTGAGAAAGAATGTGCC+TGG | - | chr5_2:7526265-7526284 | None:intergenic | 50.0% | |
| ! | ACAGACAAACCGTTGACTGC+AGG | - | chr5_2:7526346-7526365 | None:intergenic | 50.0% |
| GTCACAGGTGCTAGGAAATC+TGG | + | chr5_2:7526702-7526721 | Msa0753920:three_prime_UTR | 50.0% | |
| AGTTAAATGCGCAGACGGGT+GGG | - | chr5_2:7526759-7526778 | None:intergenic | 50.0% | |
| TAGTTAAATGCGCAGACGGG+TGG | - | chr5_2:7526760-7526779 | None:intergenic | 50.0% | |
| GCACCAGCAGCAAAGAACGT+TGG | + | chr5_2:7521847-7521866 | Msa0753920:CDS | 55.0% | |
| CCCTCCTAACTGCGTTCAAC+AGG | + | chr5_2:7521894-7521913 | Msa0753920:CDS | 55.0% | |
| !! | GAGGCATTGGAGGCTCATGA+TGG | + | chr5_2:7522281-7522300 | Msa0753920:CDS | 55.0% |
| ! | GTCAGTGTCGTGTTGGTGTC+GGG | + | chr5_2:7522527-7522546 | Msa0753920:intron | 55.0% |
| AGCAATAGCAGCAGCTCCTC+CGG | - | chr5_2:7523868-7523887 | None:intergenic | 55.0% | |
| AAGTTGAGTCTGACCTGGCC+TGG | + | chr5_2:7524461-7524480 | Msa0753920:intron | 55.0% | |
| ATTTCACCAAAGGCCAGGCC+AGG | - | chr5_2:7524477-7524496 | None:intergenic | 55.0% | |
| AAGGACACATTGGCAGGCAC+CGG | - | chr5_2:7524554-7524573 | None:intergenic | 55.0% | |
| GTGCCTGCCAATGTGTCCTT+TGG | + | chr5_2:7524554-7524573 | Msa0753920:intron | 55.0% | |
| GCGACTTCTTGAGGAATCCC+AGG | + | chr5_2:7525071-7525090 | Msa0753920:CDS | 55.0% | |
| TGACGAGAGCTACCAAAGCC+GGG | + | chr5_2:7525234-7525253 | Msa0753920:CDS | 55.0% | |
| GAAGGTCCTGCTCGACCTAC+CGG | + | chr5_2:7523846-7523865 | Msa0753920:CDS | 60.0% | |
| ATAGCAGCAGCTCCTCCGGT+AGG | - | chr5_2:7523864-7523883 | None:intergenic | 60.0% | |
| !!! | GACAGCAGCCTTTTGGCTCC+AGG | + | chr5_2:7526244-7526263 | Msa0753920:CDS | 60.0% |
| GGTCACAGGCTCACAGTCAC+AGG | + | chr5_2:7526687-7526706 | Msa0753920:three_prime_UTR | 60.0% | |
| GGCTCACAGTCACAGGTGCT+AGG | + | chr5_2:7526694-7526713 | Msa0753920:three_prime_UTR | 60.0% | |
| ! | GTCTGACCTGGCCTGGCCTT+TGG | + | chr5_2:7524468-7524487 | Msa0753920:intron | 65.0% |
| CAGACGGGTGGGTCCAAGGT+AGG | - | chr5_2:7526748-7526767 | None:intergenic | 65.0% | |
| GGTCCTGCTCGACCTACCGG+AGG | + | chr5_2:7523849-7523868 | Msa0753920:CDS | 70.0% | |
| GCTCCTCCGGTAGGTCGAGC+AGG | - | chr5_2:7523855-7523874 | None:intergenic | 70.0% | |
| TGCGCAGACGGGTGGGTCCA+AGG | - | chr5_2:7526752-7526771 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 7521718 | 7526803 | 7521718 | ID=Msa0753920;Name=Msa0753920 |
| chr5_2 | mRNA | 7521718 | 7526803 | 7521718 | ID=Msa0753920-mRNA-1;Parent=Msa0753920;Name=Msa0753920-mRNA-1;_AED=0.10;_eAED=0.10;_QI=126|1|1|1|1|1|12|425|470 |
| chr5_2 | exon | 7521718 | 7521915 | 7521718 | ID=Msa0753920-mRNA-1:exon:3362;Parent=Msa0753920-mRNA-1 |
| chr5_2 | exon | 7522281 | 7522387 | 7522281 | ID=Msa0753920-mRNA-1:exon:3363;Parent=Msa0753920-mRNA-1 |
| chr5_2 | exon | 7522986 | 7523118 | 7522986 | ID=Msa0753920-mRNA-1:exon:3364;Parent=Msa0753920-mRNA-1 |
| chr5_2 | exon | 7523550 | 7523693 | 7523550 | ID=Msa0753920-mRNA-1:exon:3365;Parent=Msa0753920-mRNA-1 |
| chr5_2 | exon | 7523837 | 7523995 | 7523837 | ID=Msa0753920-mRNA-1:exon:3366;Parent=Msa0753920-mRNA-1 |
| chr5_2 | exon | 7524247 | 7524320 | 7524247 | ID=Msa0753920-mRNA-1:exon:3367;Parent=Msa0753920-mRNA-1 |
| chr5_2 | exon | 7524795 | 7524870 | 7524795 | ID=Msa0753920-mRNA-1:exon:3368;Parent=Msa0753920-mRNA-1 |
| chr5_2 | exon | 7525037 | 7525092 | 7525037 | ID=Msa0753920-mRNA-1:exon:3369;Parent=Msa0753920-mRNA-1 |
| chr5_2 | exon | 7525180 | 7525267 | 7525180 | ID=Msa0753920-mRNA-1:exon:3370;Parent=Msa0753920-mRNA-1 |
| chr5_2 | exon | 7525382 | 7525522 | 7525382 | ID=Msa0753920-mRNA-1:exon:3371;Parent=Msa0753920-mRNA-1 |
| chr5_2 | exon | 7525616 | 7525765 | 7525616 | ID=Msa0753920-mRNA-1:exon:3372;Parent=Msa0753920-mRNA-1 |
| chr5_2 | exon | 7526166 | 7526803 | 7526166 | ID=Msa0753920-mRNA-1:exon:3373;Parent=Msa0753920-mRNA-1 |
| chr5_2 | five_prime_UTR | 7521718 | 7521843 | 7521718 | ID=Msa0753920-mRNA-1:five_prime_utr;Parent=Msa0753920-mRNA-1 |
| chr5_2 | CDS | 7521844 | 7521915 | 7521844 | ID=Msa0753920-mRNA-1:cds;Parent=Msa0753920-mRNA-1 |
| chr5_2 | CDS | 7522281 | 7522387 | 7522281 | ID=Msa0753920-mRNA-1:cds;Parent=Msa0753920-mRNA-1 |
| chr5_2 | CDS | 7522986 | 7523118 | 7522986 | ID=Msa0753920-mRNA-1:cds;Parent=Msa0753920-mRNA-1 |
| chr5_2 | CDS | 7523550 | 7523693 | 7523550 | ID=Msa0753920-mRNA-1:cds;Parent=Msa0753920-mRNA-1 |
| chr5_2 | CDS | 7523837 | 7523995 | 7523837 | ID=Msa0753920-mRNA-1:cds;Parent=Msa0753920-mRNA-1 |
| chr5_2 | CDS | 7524247 | 7524320 | 7524247 | ID=Msa0753920-mRNA-1:cds;Parent=Msa0753920-mRNA-1 |
| chr5_2 | CDS | 7524795 | 7524870 | 7524795 | ID=Msa0753920-mRNA-1:cds;Parent=Msa0753920-mRNA-1 |
| chr5_2 | CDS | 7525037 | 7525092 | 7525037 | ID=Msa0753920-mRNA-1:cds;Parent=Msa0753920-mRNA-1 |
| chr5_2 | CDS | 7525180 | 7525267 | 7525180 | ID=Msa0753920-mRNA-1:cds;Parent=Msa0753920-mRNA-1 |
| chr5_2 | CDS | 7525382 | 7525522 | 7525382 | ID=Msa0753920-mRNA-1:cds;Parent=Msa0753920-mRNA-1 |
| chr5_2 | CDS | 7525616 | 7525765 | 7525616 | ID=Msa0753920-mRNA-1:cds;Parent=Msa0753920-mRNA-1 |
| chr5_2 | CDS | 7526166 | 7526378 | 7526166 | ID=Msa0753920-mRNA-1:cds;Parent=Msa0753920-mRNA-1 |
| chr5_2 | three_prime_UTR | 7526379 | 7526803 | 7526379 | ID=Msa0753920-mRNA-1:three_prime_utr;Parent=Msa0753920-mRNA-1 |
| Gene Sequence |
| Protein sequence |
