Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199590 | sp|Q9FKT0|ARP8_ARATH | 73.853 | 218 | 54 | 2 | 1 | 215 | 229 | 446 | 2.58e-113 | 335 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199590 | A0A072TTT0 | 95.872 | 218 | 7 | 1 | 1 | 216 | 234 | 451 | 1.15e-148 | 431 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0120540 | Msa1199590 | 0.808919 | 2.444726e-50 | -8.615850e-47 |
| Msa0241740 | Msa1199590 | 0.808445 | 3.087041e-50 | -8.615850e-47 |
| Msa1174310 | Msa1199590 | 0.800053 | 1.726073e-48 | -8.615850e-47 |
| Msa1199590 | Msa1328730 | 0.912657 | 1.515054e-83 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199590 | MtrunA17_Chr8g0369101 | 95.872 | 218 | 7 | 1 | 1 | 216 | 234 | 451 | 7.90e-152 | 431 |
| Msa1199590 | MtrunA17_Chr3g0080021 | 78.636 | 220 | 43 | 3 | 1 | 216 | 226 | 445 | 1.37e-121 | 353 |
| Msa1199590 | MtrunA17_Chr2g0278591 | 32.599 | 227 | 132 | 7 | 2 | 215 | 130 | 348 | 3.47e-27 | 107 |
| Msa1199590 | MtrunA17_Chr7g0223901 | 31.111 | 225 | 138 | 7 | 2 | 215 | 130 | 348 | 1.52e-26 | 105 |
| Msa1199590 | MtrunA17_Chr3g0129641 | 31.718 | 227 | 134 | 7 | 2 | 215 | 130 | 348 | 2.13e-26 | 105 |
| Msa1199590 | MtrunA17_Chr6g0448881 | 29.956 | 227 | 138 | 7 | 2 | 215 | 130 | 348 | 1.10e-25 | 103 |
| Msa1199590 | MtrunA17_Chr2g0328091 | 30.396 | 227 | 137 | 7 | 2 | 215 | 130 | 348 | 4.32e-25 | 101 |
| Msa1199590 | MtrunA17_Chr1g0175391 | 30.837 | 227 | 136 | 7 | 2 | 215 | 130 | 348 | 4.64e-25 | 101 |
| Msa1199590 | MtrunA17_Chr7g0258721 | 30.837 | 227 | 136 | 7 | 2 | 215 | 130 | 348 | 5.62e-25 | 101 |
| Msa1199590 | MtrunA17_Chr7g0224401 | 28.452 | 239 | 142 | 9 | 13 | 229 | 142 | 373 | 4.45e-17 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1199590 | AT5G56180.3 | 73.853 | 218 | 54 | 2 | 1 | 215 | 97 | 314 | 8.72e-117 | 337 |
| Msa1199590 | AT5G56180.1 | 73.853 | 218 | 54 | 2 | 1 | 215 | 229 | 446 | 2.62e-114 | 335 |
| Msa1199590 | AT5G56180.2 | 75.735 | 136 | 30 | 2 | 1 | 133 | 229 | 364 | 6.07e-65 | 206 |
| Msa1199590 | AT2G42100.1 | 31.132 | 212 | 131 | 6 | 13 | 215 | 144 | 349 | 1.04e-26 | 106 |
| Msa1199590 | AT5G09810.1 | 32.599 | 227 | 132 | 7 | 2 | 215 | 130 | 348 | 1.34e-26 | 105 |
| Msa1199590 | AT2G42090.1 | 29.778 | 225 | 141 | 7 | 2 | 215 | 119 | 337 | 2.11e-26 | 105 |
| Msa1199590 | AT3G12110.1 | 31.111 | 225 | 138 | 7 | 2 | 215 | 130 | 348 | 5.53e-26 | 104 |
| Msa1199590 | AT3G53750.1 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 3.93e-25 | 102 |
| Msa1199590 | AT3G53750.2 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 3.93e-25 | 102 |
| Msa1199590 | AT2G37620.1 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 3.93e-25 | 102 |
| Msa1199590 | AT2G37620.3 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 3.93e-25 | 102 |
| Msa1199590 | AT2G37620.2 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 3.93e-25 | 102 |
| Msa1199590 | AT2G37620.4 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 3.93e-25 | 102 |
| Msa1199590 | AT3G18780.1 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 8.49e-24 | 98.2 |
| Msa1199590 | AT3G18780.2 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 9.15e-24 | 98.2 |
| Msa1199590 | AT3G18780.3 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 9.15e-24 | 98.2 |
| Msa1199590 | AT1G49240.1 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 9.62e-24 | 98.2 |
| Msa1199590 | AT3G46520.2 | 29.778 | 225 | 141 | 7 | 2 | 215 | 130 | 348 | 6.14e-23 | 95.9 |
| Msa1199590 | AT3G46520.1 | 29.778 | 225 | 141 | 7 | 2 | 215 | 130 | 348 | 6.14e-23 | 95.9 |
| Msa1199590 | AT2G42170.4 | 29.524 | 210 | 128 | 6 | 16 | 215 | 101 | 300 | 1.26e-22 | 94.4 |
| Msa1199590 | AT2G42170.2 | 29.524 | 210 | 128 | 6 | 16 | 215 | 101 | 300 | 1.26e-22 | 94.4 |
| Msa1199590 | AT2G42170.1 | 29.524 | 210 | 128 | 6 | 16 | 215 | 101 | 300 | 1.80e-22 | 94.0 |
| Msa1199590 | AT2G42170.3 | 29.524 | 210 | 128 | 6 | 16 | 215 | 101 | 300 | 1.80e-22 | 94.0 |
| Msa1199590 | AT5G59370.2 | 29.333 | 225 | 142 | 7 | 2 | 215 | 130 | 348 | 2.22e-22 | 94.4 |
| Msa1199590 | AT5G59370.1 | 29.333 | 225 | 142 | 7 | 2 | 215 | 130 | 348 | 2.22e-22 | 94.4 |
| Msa1199590 | AT2G42170.5 | 29.412 | 204 | 124 | 6 | 22 | 215 | 9 | 202 | 2.05e-21 | 89.4 |
| Msa1199590 | AT3G27000.1 | 26.971 | 241 | 153 | 8 | 13 | 234 | 142 | 378 | 1.25e-15 | 75.5 |
Find 69 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGTGGAGGTTGTTGGGCT+TGG | 0.218679 | 8_1:-51754360 | Msa1199590:CDS |
| TAATGTGTATTATTGGTTAT+TGG | 0.220714 | 8_1:-51752588 | Msa1199590:three_prime_UTR |
| GACTCAGTAATGTGTATTAT+TGG | 0.233729 | 8_1:-51752595 | Msa1199590:three_prime_UTR |
| CTGATTCCATTTGACATATA+AGG | 0.264725 | 8_1:+51753216 | None:intergenic |
| TTATTCCAGCCACGTCTTGC+TGG | 0.283803 | 8_1:-51753910 | Msa1199590:CDS |
| ATTGCTGCAAATCAAACTTC+TGG | 0.291234 | 8_1:-51755879 | Msa1199590:CDS |
| CTTGGAGCACTAAAACTTAC+AGG | 0.316873 | 8_1:-51754342 | Msa1199590:CDS |
| TTGCTTCTTTGTTATGCATC+AGG | 0.321313 | 8_1:+51752906 | None:intergenic |
| TTTGCTCAAATCACCATATT+CGG | 0.322966 | 8_1:+51752860 | None:intergenic |
| AGTCTAAACTCAACCGAATA+TGG | 0.325026 | 8_1:-51752873 | Msa1199590:exon |
| AACAAACTGGATGCTTATAA+AGG | 0.341909 | 8_1:+51752728 | None:intergenic |
| GTTTAAGACTGCTGTCTTAT+CGG | 0.360237 | 8_1:-51753434 | Msa1199590:CDS |
| TCTGGAATAGCTGTTAATAT+AGG | 0.362153 | 8_1:-51755861 | Msa1199590:CDS |
| TGGTTTGGTGCAAAGCTTAT+TGG | 0.372016 | 8_1:-51753159 | Msa1199590:CDS |
| AGGTGGGTGTGGAGGTTGTT+GGG | 0.401970 | 8_1:-51754365 | Msa1199590:CDS |
| TATTCCAGCCACGTCTTGCT+GGG | 0.402184 | 8_1:-51753909 | Msa1199590:CDS |
| TTTAAAGCATTTGTTACTAA+AGG | 0.412143 | 8_1:+51752781 | None:intergenic |
| CTTCCACCTTATATGTCAAA+TGG | 0.419636 | 8_1:-51753222 | Msa1199590:CDS |
| TTTAAGACTGCTGTCTTATC+GGG | 0.420000 | 8_1:-51753433 | Msa1199590:CDS |
| AATTAGCAGGCGGCAGTGAT+TGG | 0.421207 | 8_1:-51753456 | Msa1199590:CDS |
| GGAGGGTCTGCATGTTTACC+AGG | 0.423295 | 8_1:-51753412 | Msa1199590:CDS |
| ATAATATAGGAAAAGATTGA+TGG | 0.432486 | 8_1:-51752536 | None:intergenic |
| AAGGTGGGTGTGGAGGTTGT+TGG | 0.433202 | 8_1:-51754366 | Msa1199590:CDS |
| TGCTTCTTTGTTATGCATCA+GGG | 0.441370 | 8_1:+51752907 | None:intergenic |
| TCAAAAGAGCGGTTTCAAAC+AGG | 0.457651 | 8_1:-51753940 | Msa1199590:CDS |
| TGCTGTTTGTGCTCTCAACC+AGG | 0.473178 | 8_1:-51756324 | Msa1199590:intron |
| TATCTCAGCTTCATAGTCAT+AGG | 0.474195 | 8_1:+51754014 | None:intergenic |
| GCATGTTTACCAGGGTTAGC+TGG | 0.479909 | 8_1:-51753403 | Msa1199590:intron |
| GCATCATTTGAAGCCGTTGA+AGG | 0.489077 | 8_1:-51753976 | Msa1199590:CDS |
| GTATCTGCACCGTGTGGAGG+AGG | 0.492978 | 8_1:+51753186 | None:intergenic |
| ATTTCTGATCCATCAGCTTG+TGG | 0.493251 | 8_1:+51752625 | None:intergenic |
| CCATGCCATAGCTCTCTGTA+TGG | 0.504884 | 8_1:-51753497 | Msa1199590:CDS |
| TGCCATTCTGCAGAATTAGC+AGG | 0.517948 | 8_1:-51753469 | Msa1199590:CDS |
| AGACTAAATCCACAAGCTGA+TGG | 0.519654 | 8_1:-51752634 | Msa1199590:three_prime_UTR |
| CTTCTTTGTTATGCATCAGG+GGG | 0.524409 | 8_1:+51752909 | None:intergenic |
| CATCATTTGAAGCCGTTGAA+GGG | 0.525894 | 8_1:-51753975 | Msa1199590:CDS |
| TACTTCTTTCAGTGTGCGAA+CGG | 0.536038 | 8_1:+51754266 | None:intergenic |
| CGCCTGCTAATTCTGCAGAA+TGG | 0.537711 | 8_1:+51753467 | None:intergenic |
| AAGACTGCTGTCTTATCGGG+AGG | 0.538740 | 8_1:-51753430 | Msa1199590:CDS |
| GAGTGTAAACTTCCCTTCAA+CGG | 0.540008 | 8_1:+51753963 | None:intergenic |
| AGTGATGCGAAAGGTGGGTG+TGG | 0.556753 | 8_1:-51754376 | Msa1199590:CDS |
| GGTTGAGTTTAGACTTCTGA+CGG | 0.557721 | 8_1:+51752881 | None:intergenic |
| CTAATTCTGCAGAATGGCAA+TGG | 0.559944 | 8_1:+51753473 | None:intergenic |
| GGTGCAGATACTGCATGGTT+TGG | 0.569726 | 8_1:-51753174 | Msa1199590:CDS |
| ATTCCATTTGACATATAAGG+TGG | 0.570415 | 8_1:+51753219 | None:intergenic |
| TGGTAAAGTGATGCGAAAGG+TGG | 0.585736 | 8_1:-51754382 | Msa1199590:CDS |
| TGGTTGAGAGCACAAACAGC+AGG | 0.587707 | 8_1:+51756326 | None:intergenic |
| GCAGTATCTGCACCGTGTGG+AGG | 0.600623 | 8_1:+51753183 | None:intergenic |
| ATGGTCCATACAGAGAGCTA+TGG | 0.602279 | 8_1:+51753492 | None:intergenic |
| ATTCCAGCCACGTCTTGCTG+GGG | 0.602599 | 8_1:-51753908 | Msa1199590:CDS |
| AGACTGCTGTCTTATCGGGA+GGG | 0.602707 | 8_1:-51753429 | Msa1199590:CDS |
| TACTTCAGAGAGGTTAGAGA+AGG | 0.607073 | 8_1:-51753259 | Msa1199590:intron |
| AAATGGTAAAGTGATGCGAA+AGG | 0.611089 | 8_1:-51754385 | Msa1199590:CDS |
| AATAATACACATTACTGAGT+CGG | 0.612263 | 8_1:+51752597 | None:intergenic |
| TATCTGCACCGTGTGGAGGA+GGG | 0.612373 | 8_1:+51753187 | None:intergenic |
| GGTAAAGTGATGCGAAAGGT+GGG | 0.612613 | 8_1:-51754381 | Msa1199590:CDS |
| GCTTCTTTGTTATGCATCAG+GGG | 0.617866 | 8_1:+51752908 | None:intergenic |
| TTCTTTGTTATGCATCAGGG+GGG | 0.619167 | 8_1:+51752910 | None:intergenic |
| CACACGGTGCAGATACTGCA+TGG | 0.632974 | 8_1:-51753179 | Msa1199590:CDS |
| GATGCGAAAGGTGGGTGTGG+AGG | 0.643554 | 8_1:-51754373 | Msa1199590:CDS |
| CCATACAGAGAGCTATGGCA+TGG | 0.645435 | 8_1:+51753497 | None:intergenic |
| GAGGGTCTGCATGTTTACCA+GGG | 0.648864 | 8_1:-51753411 | Msa1199590:CDS |
| AGTTTACACTCTCAAAAGAG+CGG | 0.651113 | 8_1:-51753951 | Msa1199590:CDS |
| GGAAGTTTACCAGCTAACCC+TGG | 0.651314 | 8_1:+51753394 | None:intergenic |
| GTACTAACACATTATTAACA+TGG | 0.654050 | 8_1:+51752663 | None:intergenic |
| CATTCTGCAGAATTAGCAGG+CGG | 0.657368 | 8_1:-51753466 | Msa1199590:CDS |
| AGAGTCATCCCTCCTCCACA+CGG | 0.670384 | 8_1:-51753195 | Msa1199590:CDS |
| ACTTACACCCCAGCAAGACG+TGG | 0.673994 | 8_1:+51753901 | None:intergenic |
| CATGCAGTATCTGCACCGTG+TGG | 0.712978 | 8_1:+51753180 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATCTTAATGATATAT+GGG | + | chr8_1:51755615-51755634 | None:intergenic | 10.0% |
| !! | TTAAAAATCTTAATGATATA+TGG | + | chr8_1:51755616-51755635 | None:intergenic | 10.0% |
| !! | GAGAATATAAAAAATAATAT+AGG | - | chr8_1:51756365-51756384 | Msa1199590:five_prime_UTR | 10.0% |
| !! | ATATAATGTTAAGCATAATA+AGG | + | chr8_1:51753758-51753777 | None:intergenic | 15.0% |
| !! | AAATTAGTTACAAGATAAAT+AGG | + | chr8_1:51753986-51754005 | None:intergenic | 15.0% |
| !! | TAATTATTGAAAATTGTTTG+AGG | + | chr8_1:51755176-51755195 | None:intergenic | 15.0% |
| !!! | AAACAATTTTCAATAATTAG+TGG | - | chr8_1:51755177-51755196 | Msa1199590:intron | 15.0% |
| !!! | GTTGTATAAAGTTTAAAATT+AGG | + | chr8_1:51755231-51755250 | None:intergenic | 15.0% |
| !! | GAAAATATAAACAAATAAGA+CGG | + | chr8_1:51755345-51755364 | None:intergenic | 15.0% |
| !! | ATACCAAAATGTAAAAAATA+TGG | + | chr8_1:51755377-51755396 | None:intergenic | 15.0% |
| !!! | TATTTTTTACATTTTGGTAT+AGG | - | chr8_1:51755377-51755396 | Msa1199590:intron | 15.0% |
| !! | AAATTAAAGAACAAAGAGAA+TGG | + | chr8_1:51752709-51752728 | None:intergenic | 20.0% |
| !! | ATAATTAGAAGAGACATAAA+TGG | - | chr8_1:51752731-51752750 | Msa1199590:three_prime_UTR | 20.0% |
| !! | TAAATAATTTCAGGAGAATA+CGG | + | chr8_1:51752815-51752834 | None:intergenic | 20.0% |
| !! | GATTTGAACTAAATAATTTC+AGG | + | chr8_1:51752824-51752843 | None:intergenic | 20.0% |
| !! | AATCGAAAACAAATAAGTTA+AGG | + | chr8_1:51752984-51753003 | None:intergenic | 20.0% |
| !!! | TAACTTATTTGTTTTCGATT+TGG | - | chr8_1:51752984-51753003 | Msa1199590:intron | 20.0% |
| !! | ACAAAATCATAAAACATACT+TGG | + | chr8_1:51753101-51753120 | None:intergenic | 20.0% |
| !! | ATGTATTGTTAAGCATAAAA+AGG | + | chr8_1:51753138-51753157 | None:intergenic | 20.0% |
| !! | TTGTATTGAATACTGATATT+AGG | - | chr8_1:51753243-51753262 | Msa1199590:CDS | 20.0% |
| !!! | CTATTAACTTGAAAATCAAT+TGG | + | chr8_1:51753663-51753682 | None:intergenic | 20.0% |
| !! | AAGTTAATAGCTGTTAATAT+AGG | - | chr8_1:51753673-51753692 | Msa1199590:intron | 20.0% |
| !! | GGAATATGGAAAAATTAAAA+AGG | - | chr8_1:51753805-51753824 | Msa1199590:intron | 20.0% |
| !!! | TTGTAATTTTGATTCGTTTA+CGG | - | chr8_1:51754263-51754282 | Msa1199590:intron | 20.0% |
| !!! | TGTTGATTTACAGTTTTAAA+TGG | - | chr8_1:51754512-51754531 | Msa1199590:intron | 20.0% |
| !! | TTAAACTCATAAGTAATGTA+GGG | + | chr8_1:51754760-51754779 | None:intergenic | 20.0% |
| !! | TTTAAACTCATAAGTAATGT+AGG | + | chr8_1:51754761-51754780 | None:intergenic | 20.0% |
| !!! | TAGCCATATTTTTTACATTT+TGG | - | chr8_1:51755371-51755390 | Msa1199590:intron | 20.0% |
| !!! | GAAAAGTGTCAAAATAAAAA+GGG | + | chr8_1:51755544-51755563 | None:intergenic | 20.0% |
| !!! | AAGATTTTTAACTTTACTCT+TGG | - | chr8_1:51755625-51755644 | Msa1199590:intron | 20.0% |
| !!! | AGATTTTTAACTTTACTCTT+GGG | - | chr8_1:51755626-51755645 | Msa1199590:intron | 20.0% |
| !! | TATTGAACCTTTGTATAAAA+CGG | - | chr8_1:51755864-51755883 | Msa1199590:CDS | 20.0% |
| !!! | TTTAAAGCATTTGTTACTAA+AGG | + | chr8_1:51756136-51756155 | None:intergenic | 20.0% |
| !!! | TAATGTGTATTATTGGTTAT+TGG | - | chr8_1:51756326-51756345 | Msa1199590:CDS | 20.0% |
| ! | AACCTATGCTAAATAAGATT+TGG | - | chr8_1:51752659-51752678 | Msa1199590:three_prime_UTR | 25.0% |
| !! | ATCCAAATCTTATTTAGCAT+AGG | + | chr8_1:51752664-51752683 | None:intergenic | 25.0% |
| ! | AGAAAATAGCAAAGATAGAA+AGG | - | chr8_1:51752865-51752884 | Msa1199590:three_prime_UTR | 25.0% |
| !! | TGGTGAAATTTTGTAAATGT+AGG | - | chr8_1:51753004-51753023 | Msa1199590:intron | 25.0% |
| ! | ATAACGTGGAAAAATTGAAA+AGG | - | chr8_1:51753185-51753204 | Msa1199590:CDS | 25.0% |
| ! | GAAATCAGTTACATGATAAA+AGG | + | chr8_1:51753367-51753386 | None:intergenic | 25.0% |
| ! | TAAACACACTCAAGATTATA+AGG | - | chr8_1:51753558-51753577 | Msa1199590:intron | 25.0% |
| ! | AAACACACTCAAGATTATAA+GGG | - | chr8_1:51753559-51753578 | Msa1199590:intron | 25.0% |
| ! | GCAAAATCATAAAACATACT+TGG | + | chr8_1:51753721-51753740 | None:intergenic | 25.0% |
| ! | TTCTGTTGAATACTGATATT+AGG | - | chr8_1:51753862-51753881 | Msa1199590:intron | 25.0% |
| ! | TAGTTACAAGATAAATAGGA+GGG | + | chr8_1:51753982-51754001 | None:intergenic | 25.0% |
| ! | TTAGTTACAAGATAAATAGG+AGG | + | chr8_1:51753983-51754002 | None:intergenic | 25.0% |
| ! | ACAAACAAAATACACATTTG+AGG | + | chr8_1:51754140-51754159 | None:intergenic | 25.0% |
| !! | CAAATGTGTATTTTGTTAGT+TGG | - | chr8_1:51754172-51754191 | Msa1199590:intron | 25.0% |
| !! | GAAAGAGCAAACAATTATTT+TGG | + | chr8_1:51754319-51754338 | None:intergenic | 25.0% |
| ! | TGTATAGATTATAACACAAG+AGG | + | chr8_1:51754417-51754436 | None:intergenic | 25.0% |
| ! | GAAATCAACAATAAACTCAT+TGG | + | chr8_1:51754458-51754477 | None:intergenic | 25.0% |
| ! | TAAACTCATAAGTAATGTAG+GGG | + | chr8_1:51754759-51754778 | None:intergenic | 25.0% |
| !! | TATTGAAAATTGTTTGAGGT+CGG | + | chr8_1:51755172-51755191 | None:intergenic | 25.0% |
| ! | ATGTTTGATATTGTTGGAAT+AGG | - | chr8_1:51755201-51755220 | Msa1199590:intron | 25.0% |
| ! | ACAACTTCTGCAATATTATT+CGG | - | chr8_1:51755246-51755265 | Msa1199590:intron | 25.0% |
| !!! | CTATACTTTAAGATTTAGAC+AGG | + | chr8_1:51755302-51755321 | None:intergenic | 25.0% |
| ! | ATAAACAAATAAGACGGAAT+GGG | + | chr8_1:51755339-51755358 | None:intergenic | 25.0% |
| ! | TATAAACAAATAAGACGGAA+TGG | + | chr8_1:51755340-51755359 | None:intergenic | 25.0% |
| ! | GTAAAAAATATGGCTAAGAT+AGG | + | chr8_1:51755367-51755386 | None:intergenic | 25.0% |
| !!! | CGAAAAGTGTCAAAATAAAA+AGG | + | chr8_1:51755545-51755564 | None:intergenic | 25.0% |
| !!! | TCTTTTTCATCTAAACAAAC+TGG | + | chr8_1:51756202-51756221 | None:intergenic | 25.0% |
| ! | GTACTAACACATTATTAACA+TGG | + | chr8_1:51756254-51756273 | None:intergenic | 25.0% |
| ! | AATAATACACATTACTGAGT+CGG | + | chr8_1:51756320-51756339 | None:intergenic | 25.0% |
| ! | GAAGAGACATAAATGGATTT+AGG | - | chr8_1:51752738-51752757 | Msa1199590:three_prime_UTR | 30.0% |
| ! | TCTGGAATAGCTGTTAATAT+AGG | - | chr8_1:51753053-51753072 | Msa1199590:intron | 30.0% |
| TATGCTTAACAATACATCTC+TGG | - | chr8_1:51753141-51753160 | Msa1199590:intron | 30.0% | |
| TCAGTTACATGATAAAAGGA+GGG | + | chr8_1:51753363-51753382 | None:intergenic | 30.0% | |
| ATCAGTTACATGATAAAAGG+AGG | + | chr8_1:51753364-51753383 | None:intergenic | 30.0% | |
| ! | AAAAACCTCAAACGTGTTTT+TGG | - | chr8_1:51753490-51753509 | Msa1199590:CDS | 30.0% |
| AATAACAAAACCGAAGAGAT+TGG | + | chr8_1:51753633-51753652 | None:intergenic | 30.0% | |
| CTCAAAAGAGAAATTAGTTC+GGG | + | chr8_1:51754041-51754060 | None:intergenic | 30.0% | |
| GCTCAAAAGAGAAATTAGTT+CGG | + | chr8_1:51754042-51754061 | None:intergenic | 30.0% | |
| !! | GTGTATTTTGTTTGTCAGTT+TGG | - | chr8_1:51754145-51754164 | Msa1199590:intron | 30.0% |
| ! | GTGTATTTTGTTAGTTGGTT+TGG | - | chr8_1:51754177-51754196 | Msa1199590:intron | 30.0% |
| TTATGAATTCGATGCAGTAA+TGG | + | chr8_1:51754373-51754392 | None:intergenic | 30.0% | |
| ATAGATTATAACACAAGAGG+CGG | + | chr8_1:51754414-51754433 | None:intergenic | 30.0% | |
| AATGCATATATGCTCAATCA+GGG | + | chr8_1:51754493-51754512 | None:intergenic | 30.0% | |
| AAAAAGCAAATGTTGTGACT+AGG | + | chr8_1:51754805-51754824 | None:intergenic | 30.0% | |
| !!! | TATTTTGACACTTTTCGTCT+AGG | - | chr8_1:51755548-51755567 | Msa1199590:intron | 30.0% |
| ATCTGAGCATAAAGATAAAG+TGG | - | chr8_1:51755572-51755591 | Msa1199590:intron | 30.0% | |
| ATTCCATTTGACATATAAGG+TGG | + | chr8_1:51755698-51755717 | None:intergenic | 30.0% | |
| CTGATTCCATTTGACATATA+AGG | + | chr8_1:51755701-51755720 | None:intergenic | 30.0% | |
| GTGAATGTTTAAGAGTTAAG+TGG | + | chr8_1:51755794-51755813 | None:intergenic | 30.0% | |
| ! | AGTCAAACCGTTTTATACAA+AGG | + | chr8_1:51755874-51755893 | None:intergenic | 30.0% |
| ! | ACTTTTGTGTCATCTTCTTA+TGG | - | chr8_1:51755909-51755928 | Msa1199590:intron | 30.0% |
| TTTGCTCAAATCACCATATT+CGG | + | chr8_1:51756057-51756076 | None:intergenic | 30.0% | |
| AACAAACTGGATGCTTATAA+AGG | + | chr8_1:51756189-51756208 | None:intergenic | 30.0% | |
| GACTCAGTAATGTGTATTAT+TGG | - | chr8_1:51756319-51756338 | Msa1199590:intron | 30.0% | |
| !! | AACCAGGTAGCATATTTTAG+TGG | - | chr8_1:51752606-51752625 | Msa1199590:three_prime_UTR | 35.0% |
| !!! | ACCAGGTAGCATATTTTAGT+GGG | - | chr8_1:51752607-51752626 | Msa1199590:three_prime_UTR | 35.0% |
| TAAGATTTGGATCTGAGTGT+TGG | - | chr8_1:51752672-51752691 | Msa1199590:three_prime_UTR | 35.0% | |
| ! | TAGGTTTTTGCACCTCTTTA+AGG | - | chr8_1:51752757-51752776 | Msa1199590:three_prime_UTR | 35.0% |
| TGTGTTAAGGATCAAGATCA+GGG | + | chr8_1:51752789-51752808 | None:intergenic | 35.0% | |
| ATTGCTGCAAATCAAACTTC+TGG | - | chr8_1:51753035-51753054 | Msa1199590:intron | 35.0% | |
| CGTGGAAAAATTGAAAAGGA+CGG | - | chr8_1:51753189-51753208 | Msa1199590:CDS | 35.0% | |
| !! | GAGTAGTTAGCTTGTTAGTT+AGG | + | chr8_1:51753391-51753410 | None:intergenic | 35.0% |
| CACACTTTCAAGGAACAAAA+TGG | + | chr8_1:51753424-51753443 | None:intergenic | 35.0% | |
| !! | TTTTGTTCCTTGAAAGTGTG+AGG | - | chr8_1:51753424-51753443 | Msa1199590:CDS | 35.0% |
| ACTAACCAAAAACACGTTTG+AGG | + | chr8_1:51753498-51753517 | None:intergenic | 35.0% | |
| !!! | CAAACGTGTTTTTGGTTAGT+TGG | - | chr8_1:51753498-51753517 | Msa1199590:CDS | 35.0% |
| !!! | GTGTTTTTGGTTAGTTGGTT+TGG | - | chr8_1:51753503-51753522 | Msa1199590:CDS | 35.0% |
| CATGAAATACACGAACTGTT+AGG | - | chr8_1:51753784-51753803 | Msa1199590:intron | 35.0% | |
| TACACGAACTGTTAGGAATA+TGG | - | chr8_1:51753791-51753810 | Msa1199590:intron | 35.0% | |
| AGATAAATAGGAGGGTTCAA+GGG | + | chr8_1:51753974-51753993 | None:intergenic | 35.0% | |
| AAGATAAATAGGAGGGTTCA+AGG | + | chr8_1:51753975-51753994 | None:intergenic | 35.0% | |
| !! | GAGTAGTTAGCTTGTTAGTT+AGG | + | chr8_1:51753391-51753410 | None:intergenic | 35.0% |
| CACACTTTCAAGGAACAAAA+TGG | + | chr8_1:51753424-51753443 | None:intergenic | 35.0% | |
| TGACATCTCATCACATGTTT+AGG | - | chr8_1:51754291-51754310 | Msa1199590:CDS | 35.0% | |
| GACATCTCATCACATGTTTA+GGG | - | chr8_1:51754292-51754311 | Msa1199590:CDS | 35.0% | |
| ACATCTCATCACATGTTTAG+GGG | - | chr8_1:51754293-51754312 | Msa1199590:CDS | 35.0% | |
| ! | AGTAATGGTAGGGTATTTCT+AGG | + | chr8_1:51754358-51754377 | None:intergenic | 35.0% |
| AATTCGATGCAGTAATGGTA+GGG | + | chr8_1:51754368-51754387 | None:intergenic | 35.0% | |
| ATGCATATATGCTCAATCAG+GGG | + | chr8_1:51754492-51754511 | None:intergenic | 35.0% | |
| CAATGCATATATGCTCAATC+AGG | + | chr8_1:51754494-51754513 | None:intergenic | 35.0% | |
| AAATGGTAAAGTGATGCGAA+AGG | - | chr8_1:51754529-51754548 | Msa1199590:intron | 35.0% | |
| !! | AAGCTGTGTTAAGTTGAATG+CGG | - | chr8_1:51754828-51754847 | Msa1199590:intron | 35.0% |
| CTGTTTACATGTAACCAACA+AGG | + | chr8_1:51754864-51754883 | None:intergenic | 35.0% | |
| TATCTCAGCTTCATAGTCAT+AGG | + | chr8_1:51754903-51754922 | None:intergenic | 35.0% | |
| AGTTTACACTCTCAAAAGAG+CGG | - | chr8_1:51754963-51754982 | Msa1199590:intron | 35.0% | |
| GCAGGCATAATTAAAATCTC+TGG | + | chr8_1:51755089-51755108 | None:intergenic | 35.0% | |
| AGTGGCATGTTTGATATTGT+TGG | - | chr8_1:51755195-51755214 | Msa1199590:intron | 35.0% | |
| ! | GTTTAAGACTGCTGTCTTAT+CGG | - | chr8_1:51755480-51755499 | Msa1199590:intron | 35.0% |
| ! | TTTAAGACTGCTGTCTTATC+GGG | - | chr8_1:51755481-51755500 | Msa1199590:intron | 35.0% |
| CTTCCACCTTATATGTCAAA+TGG | - | chr8_1:51755692-51755711 | Msa1199590:intron | 35.0% | |
| ! | TCACATTTTCCTTGCTTCAT+AGG | - | chr8_1:51755810-51755829 | Msa1199590:intron | 35.0% |
| ! | TGCTTCTTTGTTATGCATCA+GGG | + | chr8_1:51756010-51756029 | None:intergenic | 35.0% |
| ! | TTGCTTCTTTGTTATGCATC+AGG | + | chr8_1:51756011-51756030 | None:intergenic | 35.0% |
| AGTCTAAACTCAACCGAATA+TGG | - | chr8_1:51756041-51756060 | Msa1199590:intron | 35.0% | |
| TCCCACTAAAATATGCTACC+TGG | + | chr8_1:51752611-51752630 | None:intergenic | 40.0% | |
| !! | TTGGATCTGAGTGTTGGATT+CGG | - | chr8_1:51752678-51752697 | Msa1199590:three_prime_UTR | 40.0% |
| TCAGGGAATACTCCTTAAAG+AGG | + | chr8_1:51752772-51752791 | None:intergenic | 40.0% | |
| CTGTGTTAAGGATCAAGATC+AGG | + | chr8_1:51752790-51752809 | None:intergenic | 40.0% | |
| GAGAATACGGAACTGTGTTA+AGG | + | chr8_1:51752802-51752821 | None:intergenic | 40.0% | |
| CATCTCTGGCATGAAATACA+CGG | - | chr8_1:51753155-51753174 | Msa1199590:intron | 40.0% | |
| TACACGGACTCTTAATAACG+TGG | - | chr8_1:51753171-51753190 | Msa1199590:CDS | 40.0% | |
| AACATCACCTCACACTTTCA+AGG | + | chr8_1:51753434-51753453 | None:intergenic | 40.0% | |
| TGGTCTTTCGTTAGTCAGTT+CGG | - | chr8_1:51753523-51753542 | Msa1199590:intron | 40.0% | |
| !! | CAAGATTATAAGGGTGTTCG+CGG | - | chr8_1:51753568-51753587 | Msa1199590:intron | 40.0% |
| !!! | GATTGGATTGGTTCGGTTTT+GGG | - | chr8_1:51753590-51753609 | Msa1199590:intron | 40.0% |
| ACCATCCAATCCAATCTCTT+CGG | - | chr8_1:51753620-51753639 | Msa1199590:intron | 40.0% | |
| CAAAACCGAAGAGATTGGAT+TGG | + | chr8_1:51753628-51753647 | None:intergenic | 40.0% | |
| ! | TTCCTTGAAAGTGTGAAGTG+AGG | - | chr8_1:51754076-51754095 | Msa1199590:intron | 40.0% |
| AACCTCACTTCACACTTTCA+AGG | + | chr8_1:51754081-51754100 | None:intergenic | 40.0% | |
| TGGTCTTTCGTTAGTCAGTT+TGG | - | chr8_1:51753523-51753542 | Msa1199590:intron | 40.0% | |
| !! | TAGGGTATTTCTAGGAGTCT+AGG | + | chr8_1:51754350-51754369 | None:intergenic | 40.0% |
| GAATTCGATGCAGTAATGGT+AGG | + | chr8_1:51754369-51754388 | None:intergenic | 40.0% | |
| ! | CTTGGAGCACTAAAACTTAC+AGG | - | chr8_1:51754572-51754591 | Msa1199590:intron | 40.0% |
| TACTTCTTTCAGTGTGCGAA+CGG | + | chr8_1:51754651-51754670 | None:intergenic | 40.0% | |
| TTTGATGCCACAAATGCACT+TGG | - | chr8_1:51754718-51754737 | Msa1199590:intron | 40.0% | |
| TTGATGCCACAAATGCACTT+GGG | - | chr8_1:51754719-51754738 | Msa1199590:intron | 40.0% | |
| ! | CATGTAACCAACAAGGTATC+AGG | + | chr8_1:51754857-51754876 | None:intergenic | 40.0% |
| ! | CATCATTTGAAGCCGTTGAA+GGG | - | chr8_1:51754939-51754958 | Msa1199590:intron | 40.0% |
| GAGTGTAAACTTCCCTTCAA+CGG | + | chr8_1:51754954-51754973 | None:intergenic | 40.0% | |
| TCAAAAGAGCGGTTTCAAAC+AGG | - | chr8_1:51754974-51754993 | Msa1199590:intron | 40.0% | |
| CTAATTCTGCAGAATGGCAA+TGG | + | chr8_1:51755444-51755463 | None:intergenic | 40.0% | |
| TATATGGGTAGTCTGTGTCA+TGG | + | chr8_1:51755600-51755619 | None:intergenic | 40.0% | |
| TGGGTTCATATACTTCAGAG+AGG | - | chr8_1:51755645-51755664 | Msa1199590:intron | 40.0% | |
| TACTTCAGAGAGGTTAGAGA+AGG | - | chr8_1:51755655-51755674 | Msa1199590:intron | 40.0% | |
| !! | TGGTTTGGTGCAAAGCTTAT+TGG | - | chr8_1:51755755-51755774 | Msa1199590:intron | 40.0% |
| AAGTGAAGTCCTATGAAGCA+AGG | + | chr8_1:51755822-51755841 | None:intergenic | 40.0% | |
| ! | TTCTTTGTTATGCATCAGGG+GGG | + | chr8_1:51756007-51756026 | None:intergenic | 40.0% |
| ! | CTTCTTTGTTATGCATCAGG+GGG | + | chr8_1:51756008-51756027 | None:intergenic | 40.0% |
| ! | GCTTCTTTGTTATGCATCAG+GGG | + | chr8_1:51756009-51756028 | None:intergenic | 40.0% |
| GGTTGAGTTTAGACTTCTGA+CGG | + | chr8_1:51756036-51756055 | None:intergenic | 40.0% | |
| AGACTAAATCCACAAGCTGA+TGG | - | chr8_1:51756280-51756299 | Msa1199590:intron | 40.0% | |
| ATTTCTGATCCATCAGCTTG+TGG | + | chr8_1:51756292-51756311 | None:intergenic | 40.0% | |
| !! | ATCTGAGTGTTGGATTCGGA+GGG | - | chr8_1:51752682-51752701 | Msa1199590:three_prime_UTR | 45.0% |
| AAGGAGGGTTCAAGTGTAGA+GGG | + | chr8_1:51753348-51753367 | None:intergenic | 45.0% | |
| AAAGGAGGGTTCAAGTGTAG+AGG | + | chr8_1:51753349-51753368 | None:intergenic | 45.0% | |
| !! | TTATAAGGGTGTTCGCGGAT+TGG | - | chr8_1:51753573-51753592 | Msa1199590:intron | 45.0% |
| !!! | GGATTGGATTGGTTCGGTTT+TGG | - | chr8_1:51753589-51753608 | Msa1199590:intron | 45.0% |
| ! | ACCGAAGAGATTGGATTGGA+TGG | + | chr8_1:51753624-51753643 | None:intergenic | 45.0% |
| ! | TAACACAAGAGGCGGTGTTT+TGG | + | chr8_1:51754406-51754425 | None:intergenic | 45.0% |
| CATATATGCTCAATCAGGGG+AGG | + | chr8_1:51754489-51754508 | None:intergenic | 45.0% | |
| TGGTAAAGTGATGCGAAAGG+TGG | - | chr8_1:51754532-51754551 | Msa1199590:intron | 45.0% | |
| GGTAAAGTGATGCGAAAGGT+GGG | - | chr8_1:51754533-51754552 | Msa1199590:intron | 45.0% | |
| ! | GCATCATTTGAAGCCGTTGA+AGG | - | chr8_1:51754938-51754957 | Msa1199590:intron | 45.0% |
| CAAGCAAAGCTGCTAAGTCA+TGG | + | chr8_1:51755111-51755130 | None:intergenic | 45.0% | |
| ATGGTCCATACAGAGAGCTA+TGG | + | chr8_1:51755425-51755444 | None:intergenic | 45.0% | |
| TGCCATTCTGCAGAATTAGC+AGG | - | chr8_1:51755445-51755464 | Msa1199590:intron | 45.0% | |
| CATTCTGCAGAATTAGCAGG+CGG | - | chr8_1:51755448-51755467 | Msa1199590:intron | 45.0% | |
| ACAAACAGTCAGCTCTACAG+AGG | + | chr8_1:51755956-51755975 | None:intergenic | 45.0% | |
| !!! | TATATTATTTTTTATATTCT+CGG | + | chr8_1:51756366-51756385 | None:intergenic | 5.0% |
| ! | TGGTTGAGAGCACAAACAGC+AGG | + | chr8_1:51752591-51752610 | None:intergenic | 50.0% |
| ! | TGCTGTTTGTGCTCTCAACC+AGG | - | chr8_1:51752590-51752609 | Msa1199590:three_prime_UTR | 50.0% |
| !! | GATCTGAGTGTTGGATTCGG+AGG | - | chr8_1:51752681-51752700 | Msa1199590:three_prime_UTR | 50.0% |
| GGAGAGAGATCTCTCCTCTA+AGG | - | chr8_1:51753264-51753283 | Msa1199590:intron | 50.0% | |
| GATTTGAGTGACCAGAGCGA+TGG | + | chr8_1:51753297-51753316 | None:intergenic | 50.0% | |
| AGGAGGGTTCAAGTGTAGAG+GGG | + | chr8_1:51753347-51753366 | None:intergenic | 50.0% | |
| !! | GTTCGCGGATTGGATTGGTT+CGG | - | chr8_1:51753583-51753602 | Msa1199590:intron | 50.0% |
| !!! | TGGATTGGTTCGGTTTTGGG+AGG | - | chr8_1:51753593-51753612 | Msa1199590:intron | 50.0% |
| GATTTGAGTGACCAGAGCGA+TGG | + | chr8_1:51753297-51753316 | None:intergenic | 50.0% | |
| TAGGAGGGTTCAAGGGTAGA+GGG | + | chr8_1:51753967-51753986 | None:intergenic | 50.0% | |
| ATAGGAGGGTTCAAGGGTAG+AGG | + | chr8_1:51753968-51753987 | None:intergenic | 50.0% | |
| ATGCCACAAATGCACTTGGG+AGG | - | chr8_1:51754722-51754741 | Msa1199590:intron | 50.0% | |
| TGTCCTCCCAAGTGCATTTG+TGG | + | chr8_1:51754728-51754747 | None:intergenic | 50.0% | |
| TTATTCCAGCCACGTCTTGC+TGG | - | chr8_1:51755004-51755023 | Msa1199590:intron | 50.0% | |
| TATTCCAGCCACGTCTTGCT+GGG | - | chr8_1:51755005-51755024 | Msa1199590:intron | 50.0% | |
| CAAAGCTGCTAAGTCATGGC+AGG | + | chr8_1:51755107-51755126 | None:intergenic | 50.0% | |
| CCATACAGAGAGCTATGGCA+TGG | + | chr8_1:51755420-51755439 | None:intergenic | 50.0% | |
| CCATGCCATAGCTCTCTGTA+TGG | - | chr8_1:51755417-51755436 | Msa1199590:intron | 50.0% | |
| CGCCTGCTAATTCTGCAGAA+TGG | + | chr8_1:51755450-51755469 | None:intergenic | 50.0% | |
| AATTAGCAGGCGGCAGTGAT+TGG | - | chr8_1:51755458-51755477 | Msa1199590:intron | 50.0% | |
| AAGACTGCTGTCTTATCGGG+AGG | - | chr8_1:51755484-51755503 | Msa1199590:intron | 50.0% | |
| AGACTGCTGTCTTATCGGGA+GGG | - | chr8_1:51755485-51755504 | Msa1199590:intron | 50.0% | |
| GAGGGTCTGCATGTTTACCA+GGG | - | chr8_1:51755503-51755522 | Msa1199590:intron | 50.0% | |
| ! | GCATGTTTACCAGGGTTAGC+TGG | - | chr8_1:51755511-51755530 | Msa1199590:intron | 50.0% |
| GGAAGTTTACCAGCTAACCC+TGG | + | chr8_1:51755523-51755542 | None:intergenic | 50.0% | |
| GGTGCAGATACTGCATGGTT+TGG | - | chr8_1:51755740-51755759 | Msa1199590:intron | 50.0% | |
| ! | TTTGTTATGCATCAGGGGGG+AGG | + | chr8_1:51756004-51756023 | None:intergenic | 50.0% |
| GGAGGGTTCAAGTGTAGAGG+GGG | + | chr8_1:51753346-51753365 | None:intergenic | 55.0% | |
| !! | AGGGTGTTCGCGGATTGGAT+TGG | - | chr8_1:51753578-51753597 | Msa1199590:intron | 55.0% |
| GGAGAGAGATCTCTCCTCGA+AGG | - | chr8_1:51753883-51753902 | Msa1199590:intron | 55.0% | |
| AGGAGGGTTCAAGGGTAGAG+GGG | + | chr8_1:51753966-51753985 | None:intergenic | 55.0% | |
| AGTGATGCGAAAGGTGGGTG+TGG | - | chr8_1:51754538-51754557 | Msa1199590:intron | 55.0% | |
| AAGGTGGGTGTGGAGGTTGT+TGG | - | chr8_1:51754548-51754567 | Msa1199590:intron | 55.0% | |
| AGGTGGGTGTGGAGGTTGTT+GGG | - | chr8_1:51754549-51754568 | Msa1199590:intron | 55.0% | |
| GCGGTTGCCTGATACCTTGT+TGG | - | chr8_1:51754847-51754866 | Msa1199590:intron | 55.0% | |
| ATTCCAGCCACGTCTTGCTG+GGG | - | chr8_1:51755006-51755025 | Msa1199590:intron | 55.0% | |
| ACTTACACCCCAGCAAGACG+TGG | + | chr8_1:51755016-51755035 | None:intergenic | 55.0% | |
| GGAGGGTCTGCATGTTTACC+AGG | - | chr8_1:51755502-51755521 | Msa1199590:intron | 55.0% | |
| AGAGTCATCCCTCCTCCACA+CGG | - | chr8_1:51755719-51755738 | Msa1199590:intron | 55.0% | |
| TATCTGCACCGTGTGGAGGA+GGG | + | chr8_1:51755730-51755749 | None:intergenic | 55.0% | |
| CATGCAGTATCTGCACCGTG+TGG | + | chr8_1:51755737-51755756 | None:intergenic | 55.0% | |
| CACACGGTGCAGATACTGCA+TGG | - | chr8_1:51755735-51755754 | Msa1199590:intron | 55.0% | |
| TATGCATCAGGGGGGAGGAA+AGG | + | chr8_1:51755999-51756018 | None:intergenic | 55.0% | |
| !! | GCGATGGCTCTGAGCCTTAG+AGG | + | chr8_1:51753281-51753300 | None:intergenic | 60.0% |
| AAGGCTCAGAGCCATCGCTC+TGG | - | chr8_1:51753283-51753302 | Msa1199590:intron | 60.0% | |
| AAGGCTCAGAGCCATCGCTC+TGG | - | chr8_1:51753283-51753302 | Msa1199590:intron | 60.0% | |
| GAGGGTTCAAGGGTAGAGGG+GGG | + | chr8_1:51753964-51753983 | None:intergenic | 60.0% | |
| GGAGGGTTCAAGGGTAGAGG+GGG | + | chr8_1:51753965-51753984 | None:intergenic | 60.0% | |
| GATGCGAAAGGTGGGTGTGG+AGG | - | chr8_1:51754541-51754560 | Msa1199590:intron | 60.0% | |
| GGTGTGGAGGTTGTTGGGCT+TGG | - | chr8_1:51754554-51754573 | Msa1199590:intron | 60.0% | |
| GTATCTGCACCGTGTGGAGG+AGG | + | chr8_1:51755731-51755750 | None:intergenic | 60.0% | |
| GCAGTATCTGCACCGTGTGG+AGG | + | chr8_1:51755734-51755753 | None:intergenic | 60.0% | |
| !! | GCGATGGCTCTGAGCCTTCG+AGG | + | chr8_1:51753900-51753919 | None:intergenic | 65.0% |
| ACACCCCAGCAAGACGTGGC+TGG | + | chr8_1:51755012-51755031 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 51752539 | 51756397 | 51752539 | ID=Msa1199590;Name=Msa1199590 |
| chr8_1 | mRNA | 51752539 | 51756397 | 51752539 | ID=Msa1199590-mRNA-1;Parent=Msa1199590;Name=Msa1199590-mRNA-1;_AED=0.07;_eAED=0.10;_QI=40|0.5|0.42|1|0.83|0.71|7|350|235 |
| chr8_1 | exon | 51752539 | 51752947 | 51752539 | ID=Msa1199590-mRNA-1:exon:16336;Parent=Msa1199590-mRNA-1 |
| chr8_1 | exon | 51753157 | 51753273 | 51753157 | ID=Msa1199590-mRNA-1:exon:16335;Parent=Msa1199590-mRNA-1 |
| chr8_1 | exon | 51753404 | 51753537 | 51753404 | ID=Msa1199590-mRNA-1:exon:16334;Parent=Msa1199590-mRNA-1 |
| chr8_1 | exon | 51753907 | 51754052 | 51753907 | ID=Msa1199590-mRNA-1:exon:16333;Parent=Msa1199590-mRNA-1 |
| chr8_1 | exon | 51754269 | 51754411 | 51754269 | ID=Msa1199590-mRNA-1:exon:16332;Parent=Msa1199590-mRNA-1 |
| chr8_1 | exon | 51755835 | 51755910 | 51755835 | ID=Msa1199590-mRNA-1:exon:16331;Parent=Msa1199590-mRNA-1 |
| chr8_1 | exon | 51756325 | 51756397 | 51756325 | ID=Msa1199590-mRNA-1:exon:16330;Parent=Msa1199590-mRNA-1 |
| chr8_1 | five_prime_UTR | 51756358 | 51756397 | 51756358 | ID=Msa1199590-mRNA-1:five_prime_utr;Parent=Msa1199590-mRNA-1 |
| chr8_1 | CDS | 51756325 | 51756357 | 51756325 | ID=Msa1199590-mRNA-1:cds;Parent=Msa1199590-mRNA-1 |
| chr8_1 | CDS | 51755835 | 51755910 | 51755835 | ID=Msa1199590-mRNA-1:cds;Parent=Msa1199590-mRNA-1 |
| chr8_1 | CDS | 51754269 | 51754411 | 51754269 | ID=Msa1199590-mRNA-1:cds;Parent=Msa1199590-mRNA-1 |
| chr8_1 | CDS | 51753907 | 51754052 | 51753907 | ID=Msa1199590-mRNA-1:cds;Parent=Msa1199590-mRNA-1 |
| chr8_1 | CDS | 51753404 | 51753537 | 51753404 | ID=Msa1199590-mRNA-1:cds;Parent=Msa1199590-mRNA-1 |
| chr8_1 | CDS | 51753157 | 51753273 | 51753157 | ID=Msa1199590-mRNA-1:cds;Parent=Msa1199590-mRNA-1 |
| chr8_1 | CDS | 51752889 | 51752947 | 51752889 | ID=Msa1199590-mRNA-1:cds;Parent=Msa1199590-mRNA-1 |
| chr8_1 | three_prime_UTR | 51752539 | 51752888 | 51752539 | ID=Msa1199590-mRNA-1:three_prime_utr;Parent=Msa1199590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
