Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328730 | KEH20258.1 | 95.872 | 218 | 7 | 1 | 1 | 216 | 234 | 451 | 2.40e-148 | 431 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328730 | sp|Q9FKT0|ARP8_ARATH | 73.853 | 218 | 54 | 2 | 1 | 215 | 229 | 446 | 2.58e-113 | 335 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328730 | A0A072TTT0 | 95.872 | 218 | 7 | 1 | 1 | 216 | 234 | 451 | 1.15e-148 | 431 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0085720 | Msa1328730 | 0.807292 | 5.426893e-50 | -8.615850e-47 |
| Msa0679550 | Msa1328730 | 0.819885 | 9.181055e-53 | -8.615850e-47 |
| Msa0715110 | Msa1328730 | 0.823765 | 1.161067e-53 | -8.615850e-47 |
| Msa0791910 | Msa1328730 | 0.804793 | 1.821690e-49 | -8.615850e-47 |
| Msa0794320 | Msa1328730 | 0.804709 | 1.896058e-49 | -8.615850e-47 |
| Msa1306750 | Msa1328730 | 0.804112 | 2.525768e-49 | -8.615850e-47 |
| Msa1314770 | Msa1328730 | 0.822645 | 2.120844e-53 | -8.615850e-47 |
| Msa1328730 | Msa1435400 | 0.806280 | 8.882123e-50 | -8.615850e-47 |
| Msa0365490 | Msa1328730 | 0.814780 | 1.294340e-51 | -8.615850e-47 |
| Msa0388030 | Msa1328730 | -0.803058 | 4.178742e-49 | -8.615850e-47 |
| Msa0464900 | Msa1328730 | 0.801598 | 8.347109e-49 | -8.615850e-47 |
| Msa1021510 | Msa1328730 | 0.801681 | 8.028481e-49 | -8.615850e-47 |
| Msa1047720 | Msa1328730 | 0.803375 | 3.592250e-49 | -8.615850e-47 |
| Msa1092090 | Msa1328730 | 0.818037 | 2.415199e-52 | -8.615850e-47 |
| Msa0241740 | Msa1328730 | 0.800253 | 1.571984e-48 | -8.615850e-47 |
| Msa1174310 | Msa1328730 | 0.819184 | 1.326855e-52 | -8.615850e-47 |
| Msa1199590 | Msa1328730 | 0.912657 | 1.515054e-83 | -8.615850e-47 |
| Msa1219430 | Msa1328730 | 0.806514 | 7.926279e-50 | -8.615850e-47 |
| Msa0505060 | Msa1328730 | 0.835256 | 1.865504e-56 | -8.615850e-47 |
| Msa0587190 | Msa1328730 | 0.809290 | 2.035756e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328730 | MtrunA17_Chr8g0369101 | 95.872 | 218 | 7 | 1 | 1 | 216 | 234 | 451 | 7.90e-152 | 431 |
| Msa1328730 | MtrunA17_Chr3g0080021 | 78.636 | 220 | 43 | 3 | 1 | 216 | 226 | 445 | 1.37e-121 | 353 |
| Msa1328730 | MtrunA17_Chr2g0278591 | 32.599 | 227 | 132 | 7 | 2 | 215 | 130 | 348 | 3.47e-27 | 107 |
| Msa1328730 | MtrunA17_Chr7g0223901 | 31.111 | 225 | 138 | 7 | 2 | 215 | 130 | 348 | 1.52e-26 | 105 |
| Msa1328730 | MtrunA17_Chr3g0129641 | 31.718 | 227 | 134 | 7 | 2 | 215 | 130 | 348 | 2.13e-26 | 105 |
| Msa1328730 | MtrunA17_Chr6g0448881 | 29.956 | 227 | 138 | 7 | 2 | 215 | 130 | 348 | 1.10e-25 | 103 |
| Msa1328730 | MtrunA17_Chr2g0328091 | 30.396 | 227 | 137 | 7 | 2 | 215 | 130 | 348 | 4.32e-25 | 101 |
| Msa1328730 | MtrunA17_Chr1g0175391 | 30.837 | 227 | 136 | 7 | 2 | 215 | 130 | 348 | 4.64e-25 | 101 |
| Msa1328730 | MtrunA17_Chr7g0258721 | 30.837 | 227 | 136 | 7 | 2 | 215 | 130 | 348 | 5.62e-25 | 101 |
| Msa1328730 | MtrunA17_Chr7g0224401 | 28.452 | 239 | 142 | 9 | 13 | 229 | 142 | 373 | 4.45e-17 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1328730 | AT5G56180.3 | 73.853 | 218 | 54 | 2 | 1 | 215 | 97 | 314 | 8.72e-117 | 337 |
| Msa1328730 | AT5G56180.1 | 73.853 | 218 | 54 | 2 | 1 | 215 | 229 | 446 | 2.62e-114 | 335 |
| Msa1328730 | AT5G56180.2 | 75.735 | 136 | 30 | 2 | 1 | 133 | 229 | 364 | 6.07e-65 | 206 |
| Msa1328730 | AT2G42100.1 | 31.132 | 212 | 131 | 6 | 13 | 215 | 144 | 349 | 1.04e-26 | 106 |
| Msa1328730 | AT5G09810.1 | 32.599 | 227 | 132 | 7 | 2 | 215 | 130 | 348 | 1.34e-26 | 105 |
| Msa1328730 | AT2G42090.1 | 29.778 | 225 | 141 | 7 | 2 | 215 | 119 | 337 | 2.11e-26 | 105 |
| Msa1328730 | AT3G12110.1 | 31.111 | 225 | 138 | 7 | 2 | 215 | 130 | 348 | 5.53e-26 | 104 |
| Msa1328730 | AT3G53750.1 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 3.93e-25 | 102 |
| Msa1328730 | AT3G53750.2 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 3.93e-25 | 102 |
| Msa1328730 | AT2G37620.1 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 3.93e-25 | 102 |
| Msa1328730 | AT2G37620.3 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 3.93e-25 | 102 |
| Msa1328730 | AT2G37620.2 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 3.93e-25 | 102 |
| Msa1328730 | AT2G37620.4 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 3.93e-25 | 102 |
| Msa1328730 | AT3G18780.1 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 8.49e-24 | 98.2 |
| Msa1328730 | AT3G18780.2 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 9.15e-24 | 98.2 |
| Msa1328730 | AT3G18780.3 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 9.15e-24 | 98.2 |
| Msa1328730 | AT1G49240.1 | 30.222 | 225 | 140 | 7 | 2 | 215 | 130 | 348 | 9.62e-24 | 98.2 |
| Msa1328730 | AT3G46520.2 | 29.778 | 225 | 141 | 7 | 2 | 215 | 130 | 348 | 6.14e-23 | 95.9 |
| Msa1328730 | AT3G46520.1 | 29.778 | 225 | 141 | 7 | 2 | 215 | 130 | 348 | 6.14e-23 | 95.9 |
| Msa1328730 | AT2G42170.4 | 29.524 | 210 | 128 | 6 | 16 | 215 | 101 | 300 | 1.26e-22 | 94.4 |
| Msa1328730 | AT2G42170.2 | 29.524 | 210 | 128 | 6 | 16 | 215 | 101 | 300 | 1.26e-22 | 94.4 |
| Msa1328730 | AT2G42170.1 | 29.524 | 210 | 128 | 6 | 16 | 215 | 101 | 300 | 1.80e-22 | 94.0 |
| Msa1328730 | AT2G42170.3 | 29.524 | 210 | 128 | 6 | 16 | 215 | 101 | 300 | 1.80e-22 | 94.0 |
| Msa1328730 | AT5G59370.2 | 29.333 | 225 | 142 | 7 | 2 | 215 | 130 | 348 | 2.22e-22 | 94.4 |
| Msa1328730 | AT5G59370.1 | 29.333 | 225 | 142 | 7 | 2 | 215 | 130 | 348 | 2.22e-22 | 94.4 |
| Msa1328730 | AT2G42170.5 | 29.412 | 204 | 124 | 6 | 22 | 215 | 9 | 202 | 2.05e-21 | 89.4 |
| Msa1328730 | AT3G27000.1 | 26.971 | 241 | 153 | 8 | 13 | 234 | 142 | 378 | 1.25e-15 | 75.5 |
Find 69 sgRNAs with CRISPR-Local
Find 237 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGTGGAGGTTGTTGGGCT+TGG | 0.218679 | 8_4:-46697173 | Msa1328730:CDS |
| TAATGTGTATTATTGGTTAT+TGG | 0.220714 | 8_4:-46695401 | Msa1328730:three_prime_UTR |
| GACTCAGTAATGTGTATTAT+TGG | 0.233729 | 8_4:-46695408 | Msa1328730:three_prime_UTR |
| CTGATTCCATTTGACATATA+AGG | 0.264725 | 8_4:+46696029 | None:intergenic |
| TTATTCCAGCCACGTCTTGC+TGG | 0.283803 | 8_4:-46696723 | Msa1328730:CDS |
| ATTGCTGCAAATCAAACTTC+TGG | 0.291234 | 8_4:-46698692 | Msa1328730:CDS |
| CTTGGAGCACTAAAACTTAC+AGG | 0.316873 | 8_4:-46697155 | Msa1328730:CDS |
| TTGCTTCTTTGTTATGCATC+AGG | 0.321313 | 8_4:+46695719 | None:intergenic |
| TTTGCTCAAATCACCATATT+CGG | 0.322966 | 8_4:+46695673 | None:intergenic |
| AGTCTAAACTCAACCGAATA+TGG | 0.325026 | 8_4:-46695686 | Msa1328730:exon |
| AACAAACTGGATGCTTATAA+AGG | 0.341909 | 8_4:+46695541 | None:intergenic |
| GTTTAAGACTGCTGTCTTAT+CGG | 0.360237 | 8_4:-46696247 | Msa1328730:CDS |
| TCTGGAATAGCTGTTAATAT+AGG | 0.362153 | 8_4:-46698674 | Msa1328730:CDS |
| TGGTTTGGTGCAAAGCTTAT+TGG | 0.372016 | 8_4:-46695972 | Msa1328730:CDS |
| AGGTGGGTGTGGAGGTTGTT+GGG | 0.401970 | 8_4:-46697178 | Msa1328730:CDS |
| TATTCCAGCCACGTCTTGCT+GGG | 0.402184 | 8_4:-46696722 | Msa1328730:CDS |
| TTTAAAGCATTTGTTACTAA+AGG | 0.412143 | 8_4:+46695594 | None:intergenic |
| CTTCCACCTTATATGTCAAA+TGG | 0.419636 | 8_4:-46696035 | Msa1328730:CDS |
| TTTAAGACTGCTGTCTTATC+GGG | 0.420000 | 8_4:-46696246 | Msa1328730:CDS |
| AATTAGCAGGCGGCAGTGAT+TGG | 0.421207 | 8_4:-46696269 | Msa1328730:CDS |
| GGAGGGTCTGCATGTTTACC+AGG | 0.423295 | 8_4:-46696225 | Msa1328730:CDS |
| ATAATATAGGAAAAGATTGA+TGG | 0.432486 | 8_4:-46695349 | None:intergenic |
| AAGGTGGGTGTGGAGGTTGT+TGG | 0.433202 | 8_4:-46697179 | Msa1328730:CDS |
| TGCTTCTTTGTTATGCATCA+GGG | 0.441370 | 8_4:+46695720 | None:intergenic |
| TCAAAAGAGCGGTTTCAAAC+AGG | 0.457651 | 8_4:-46696753 | Msa1328730:CDS |
| TGCTGTTTGTGCTCTCAACC+AGG | 0.473178 | 8_4:-46699137 | Msa1328730:intron |
| TATCTCAGCTTCATAGTCAT+AGG | 0.474195 | 8_4:+46696827 | None:intergenic |
| GCATGTTTACCAGGGTTAGC+TGG | 0.479909 | 8_4:-46696216 | Msa1328730:intron |
| GCATCATTTGAAGCCGTTGA+AGG | 0.489077 | 8_4:-46696789 | Msa1328730:CDS |
| GTATCTGCACCGTGTGGAGG+AGG | 0.492978 | 8_4:+46695999 | None:intergenic |
| ATTTCTGATCCATCAGCTTG+TGG | 0.493251 | 8_4:+46695438 | None:intergenic |
| CCATGCCATAGCTCTCTGTA+TGG | 0.504884 | 8_4:-46696310 | Msa1328730:CDS |
| TGCCATTCTGCAGAATTAGC+AGG | 0.517948 | 8_4:-46696282 | Msa1328730:CDS |
| AGACTAAATCCACAAGCTGA+TGG | 0.519654 | 8_4:-46695447 | Msa1328730:three_prime_UTR |
| CTTCTTTGTTATGCATCAGG+GGG | 0.524409 | 8_4:+46695722 | None:intergenic |
| CATCATTTGAAGCCGTTGAA+GGG | 0.525894 | 8_4:-46696788 | Msa1328730:CDS |
| TACTTCTTTCAGTGTGCGAA+CGG | 0.536038 | 8_4:+46697079 | None:intergenic |
| CGCCTGCTAATTCTGCAGAA+TGG | 0.537711 | 8_4:+46696280 | None:intergenic |
| AAGACTGCTGTCTTATCGGG+AGG | 0.538740 | 8_4:-46696243 | Msa1328730:CDS |
| GAGTGTAAACTTCCCTTCAA+CGG | 0.540008 | 8_4:+46696776 | None:intergenic |
| AGTGATGCGAAAGGTGGGTG+TGG | 0.556753 | 8_4:-46697189 | Msa1328730:CDS |
| GGTTGAGTTTAGACTTCTGA+CGG | 0.557721 | 8_4:+46695694 | None:intergenic |
| CTAATTCTGCAGAATGGCAA+TGG | 0.559944 | 8_4:+46696286 | None:intergenic |
| GGTGCAGATACTGCATGGTT+TGG | 0.569726 | 8_4:-46695987 | Msa1328730:CDS |
| ATTCCATTTGACATATAAGG+TGG | 0.570415 | 8_4:+46696032 | None:intergenic |
| TGGTAAAGTGATGCGAAAGG+TGG | 0.585736 | 8_4:-46697195 | Msa1328730:CDS |
| TGGTTGAGAGCACAAACAGC+AGG | 0.587707 | 8_4:+46699139 | None:intergenic |
| GCAGTATCTGCACCGTGTGG+AGG | 0.600623 | 8_4:+46695996 | None:intergenic |
| ATGGTCCATACAGAGAGCTA+TGG | 0.602279 | 8_4:+46696305 | None:intergenic |
| ATTCCAGCCACGTCTTGCTG+GGG | 0.602599 | 8_4:-46696721 | Msa1328730:CDS |
| AGACTGCTGTCTTATCGGGA+GGG | 0.602707 | 8_4:-46696242 | Msa1328730:CDS |
| TACTTCAGAGAGGTTAGAGA+AGG | 0.607073 | 8_4:-46696072 | Msa1328730:intron |
| AAATGGTAAAGTGATGCGAA+AGG | 0.611089 | 8_4:-46697198 | Msa1328730:CDS |
| AATAATACACATTACTGAGT+CGG | 0.612263 | 8_4:+46695410 | None:intergenic |
| TATCTGCACCGTGTGGAGGA+GGG | 0.612373 | 8_4:+46696000 | None:intergenic |
| GGTAAAGTGATGCGAAAGGT+GGG | 0.612613 | 8_4:-46697194 | Msa1328730:CDS |
| GCTTCTTTGTTATGCATCAG+GGG | 0.617866 | 8_4:+46695721 | None:intergenic |
| TTCTTTGTTATGCATCAGGG+GGG | 0.619167 | 8_4:+46695723 | None:intergenic |
| CACACGGTGCAGATACTGCA+TGG | 0.632974 | 8_4:-46695992 | Msa1328730:CDS |
| GATGCGAAAGGTGGGTGTGG+AGG | 0.643554 | 8_4:-46697186 | Msa1328730:CDS |
| CCATACAGAGAGCTATGGCA+TGG | 0.645435 | 8_4:+46696310 | None:intergenic |
| GAGGGTCTGCATGTTTACCA+GGG | 0.648864 | 8_4:-46696224 | Msa1328730:CDS |
| AGTTTACACTCTCAAAAGAG+CGG | 0.651113 | 8_4:-46696764 | Msa1328730:CDS |
| GGAAGTTTACCAGCTAACCC+TGG | 0.651314 | 8_4:+46696207 | None:intergenic |
| GTACTAACACATTATTAACA+TGG | 0.654050 | 8_4:+46695476 | None:intergenic |
| CATTCTGCAGAATTAGCAGG+CGG | 0.657368 | 8_4:-46696279 | Msa1328730:CDS |
| AGAGTCATCCCTCCTCCACA+CGG | 0.670384 | 8_4:-46696008 | Msa1328730:CDS |
| ACTTACACCCCAGCAAGACG+TGG | 0.673994 | 8_4:+46696714 | None:intergenic |
| CATGCAGTATCTGCACCGTG+TGG | 0.712978 | 8_4:+46695993 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAATCTTAATGATATAT+GGG | + | chr8_4:46698428-46698447 | None:intergenic | 10.0% |
| !! | TTAAAAATCTTAATGATATA+TGG | + | chr8_4:46698429-46698448 | None:intergenic | 10.0% |
| !! | GAGAATATAAAAAATAATAT+AGG | - | chr8_4:46699178-46699197 | Msa1328730:five_prime_UTR | 10.0% |
| !! | ATATAATGTTAAGCATAATA+AGG | + | chr8_4:46696571-46696590 | None:intergenic | 15.0% |
| !! | AAATTAGTTACAAGATAAAT+AGG | + | chr8_4:46696799-46696818 | None:intergenic | 15.0% |
| !! | TAATTATTGAAAATTGTTTG+AGG | + | chr8_4:46697989-46698008 | None:intergenic | 15.0% |
| !!! | AAACAATTTTCAATAATTAG+TGG | - | chr8_4:46697990-46698009 | Msa1328730:intron | 15.0% |
| !!! | GTTGTATAAAGTTTAAAATT+AGG | + | chr8_4:46698044-46698063 | None:intergenic | 15.0% |
| !! | GAAAATATAAACAAATAAGA+CGG | + | chr8_4:46698158-46698177 | None:intergenic | 15.0% |
| !! | ATACCAAAATGTAAAAAATA+TGG | + | chr8_4:46698190-46698209 | None:intergenic | 15.0% |
| !!! | TATTTTTTACATTTTGGTAT+AGG | - | chr8_4:46698190-46698209 | Msa1328730:intron | 15.0% |
| !! | AAATTAAAGAACAAAGAGAA+TGG | + | chr8_4:46695522-46695541 | None:intergenic | 20.0% |
| !! | ATAATTAGAAGAGACATAAA+TGG | - | chr8_4:46695544-46695563 | Msa1328730:three_prime_UTR | 20.0% |
| !! | TAAATAATTTCAGGAGAATA+CGG | + | chr8_4:46695628-46695647 | None:intergenic | 20.0% |
| !! | GATTTGAACTAAATAATTTC+AGG | + | chr8_4:46695637-46695656 | None:intergenic | 20.0% |
| !! | AATCGAAAACAAATAAGTTA+AGG | + | chr8_4:46695797-46695816 | None:intergenic | 20.0% |
| !!! | TAACTTATTTGTTTTCGATT+TGG | - | chr8_4:46695797-46695816 | Msa1328730:intron | 20.0% |
| !! | ACAAAATCATAAAACATACT+TGG | + | chr8_4:46695914-46695933 | None:intergenic | 20.0% |
| !! | ATGTATTGTTAAGCATAAAA+AGG | + | chr8_4:46695951-46695970 | None:intergenic | 20.0% |
| !! | TTGTATTGAATACTGATATT+AGG | - | chr8_4:46696056-46696075 | Msa1328730:CDS | 20.0% |
| !!! | CTATTAACTTGAAAATCAAT+TGG | + | chr8_4:46696476-46696495 | None:intergenic | 20.0% |
| !! | AAGTTAATAGCTGTTAATAT+AGG | - | chr8_4:46696486-46696505 | Msa1328730:intron | 20.0% |
| !! | GGAATATGGAAAAATTAAAA+AGG | - | chr8_4:46696618-46696637 | Msa1328730:intron | 20.0% |
| !!! | TTGTAATTTTGATTCGTTTA+CGG | - | chr8_4:46697076-46697095 | Msa1328730:intron | 20.0% |
| !!! | TGTTGATTTACAGTTTTAAA+TGG | - | chr8_4:46697325-46697344 | Msa1328730:intron | 20.0% |
| !! | TTAAACTCATAAGTAATGTA+GGG | + | chr8_4:46697573-46697592 | None:intergenic | 20.0% |
| !! | TTTAAACTCATAAGTAATGT+AGG | + | chr8_4:46697574-46697593 | None:intergenic | 20.0% |
| !!! | TAGCCATATTTTTTACATTT+TGG | - | chr8_4:46698184-46698203 | Msa1328730:intron | 20.0% |
| !!! | GAAAAGTGTCAAAATAAAAA+GGG | + | chr8_4:46698357-46698376 | None:intergenic | 20.0% |
| !!! | AAGATTTTTAACTTTACTCT+TGG | - | chr8_4:46698438-46698457 | Msa1328730:intron | 20.0% |
| !!! | AGATTTTTAACTTTACTCTT+GGG | - | chr8_4:46698439-46698458 | Msa1328730:intron | 20.0% |
| !! | TATTGAACCTTTGTATAAAA+CGG | - | chr8_4:46698677-46698696 | Msa1328730:CDS | 20.0% |
| !!! | TTTAAAGCATTTGTTACTAA+AGG | + | chr8_4:46698949-46698968 | None:intergenic | 20.0% |
| !!! | TAATGTGTATTATTGGTTAT+TGG | - | chr8_4:46699139-46699158 | Msa1328730:CDS | 20.0% |
| ! | AACCTATGCTAAATAAGATT+TGG | - | chr8_4:46695472-46695491 | Msa1328730:three_prime_UTR | 25.0% |
| !! | ATCCAAATCTTATTTAGCAT+AGG | + | chr8_4:46695477-46695496 | None:intergenic | 25.0% |
| ! | AGAAAATAGCAAAGATAGAA+AGG | - | chr8_4:46695678-46695697 | Msa1328730:three_prime_UTR | 25.0% |
| !! | TGGTGAAATTTTGTAAATGT+AGG | - | chr8_4:46695817-46695836 | Msa1328730:intron | 25.0% |
| ! | ATAACGTGGAAAAATTGAAA+AGG | - | chr8_4:46695998-46696017 | Msa1328730:CDS | 25.0% |
| ! | GAAATCAGTTACATGATAAA+AGG | + | chr8_4:46696180-46696199 | None:intergenic | 25.0% |
| ! | TAAACACACTCAAGATTATA+AGG | - | chr8_4:46696371-46696390 | Msa1328730:intron | 25.0% |
| ! | AAACACACTCAAGATTATAA+GGG | - | chr8_4:46696372-46696391 | Msa1328730:intron | 25.0% |
| ! | GCAAAATCATAAAACATACT+TGG | + | chr8_4:46696534-46696553 | None:intergenic | 25.0% |
| ! | TTCTGTTGAATACTGATATT+AGG | - | chr8_4:46696675-46696694 | Msa1328730:intron | 25.0% |
| ! | TAGTTACAAGATAAATAGGA+GGG | + | chr8_4:46696795-46696814 | None:intergenic | 25.0% |
| ! | TTAGTTACAAGATAAATAGG+AGG | + | chr8_4:46696796-46696815 | None:intergenic | 25.0% |
| ! | ACAAACAAAATACACATTTG+AGG | + | chr8_4:46696953-46696972 | None:intergenic | 25.0% |
| !! | CAAATGTGTATTTTGTTAGT+TGG | - | chr8_4:46696985-46697004 | Msa1328730:intron | 25.0% |
| !! | GAAAGAGCAAACAATTATTT+TGG | + | chr8_4:46697132-46697151 | None:intergenic | 25.0% |
| ! | TGTATAGATTATAACACAAG+AGG | + | chr8_4:46697230-46697249 | None:intergenic | 25.0% |
| ! | GAAATCAACAATAAACTCAT+TGG | + | chr8_4:46697271-46697290 | None:intergenic | 25.0% |
| ! | TAAACTCATAAGTAATGTAG+GGG | + | chr8_4:46697572-46697591 | None:intergenic | 25.0% |
| !! | TATTGAAAATTGTTTGAGGT+CGG | + | chr8_4:46697985-46698004 | None:intergenic | 25.0% |
| ! | ATGTTTGATATTGTTGGAAT+AGG | - | chr8_4:46698014-46698033 | Msa1328730:intron | 25.0% |
| ! | ACAACTTCTGCAATATTATT+CGG | - | chr8_4:46698059-46698078 | Msa1328730:intron | 25.0% |
| !!! | CTATACTTTAAGATTTAGAC+AGG | + | chr8_4:46698115-46698134 | None:intergenic | 25.0% |
| ! | ATAAACAAATAAGACGGAAT+GGG | + | chr8_4:46698152-46698171 | None:intergenic | 25.0% |
| ! | TATAAACAAATAAGACGGAA+TGG | + | chr8_4:46698153-46698172 | None:intergenic | 25.0% |
| ! | GTAAAAAATATGGCTAAGAT+AGG | + | chr8_4:46698180-46698199 | None:intergenic | 25.0% |
| !!! | CGAAAAGTGTCAAAATAAAA+AGG | + | chr8_4:46698358-46698377 | None:intergenic | 25.0% |
| !!! | TCTTTTTCATCTAAACAAAC+TGG | + | chr8_4:46699015-46699034 | None:intergenic | 25.0% |
| ! | GTACTAACACATTATTAACA+TGG | + | chr8_4:46699067-46699086 | None:intergenic | 25.0% |
| ! | AATAATACACATTACTGAGT+CGG | + | chr8_4:46699133-46699152 | None:intergenic | 25.0% |
| ! | GAAGAGACATAAATGGATTT+AGG | - | chr8_4:46695551-46695570 | Msa1328730:three_prime_UTR | 30.0% |
| ! | TCTGGAATAGCTGTTAATAT+AGG | - | chr8_4:46695866-46695885 | Msa1328730:intron | 30.0% |
| TATGCTTAACAATACATCTC+TGG | - | chr8_4:46695954-46695973 | Msa1328730:intron | 30.0% | |
| TCAGTTACATGATAAAAGGA+GGG | + | chr8_4:46696176-46696195 | None:intergenic | 30.0% | |
| ATCAGTTACATGATAAAAGG+AGG | + | chr8_4:46696177-46696196 | None:intergenic | 30.0% | |
| ! | AAAAACCTCAAACGTGTTTT+TGG | - | chr8_4:46696303-46696322 | Msa1328730:CDS | 30.0% |
| AATAACAAAACCGAAGAGAT+TGG | + | chr8_4:46696446-46696465 | None:intergenic | 30.0% | |
| CTCAAAAGAGAAATTAGTTC+GGG | + | chr8_4:46696854-46696873 | None:intergenic | 30.0% | |
| GCTCAAAAGAGAAATTAGTT+CGG | + | chr8_4:46696855-46696874 | None:intergenic | 30.0% | |
| !! | GTGTATTTTGTTTGTCAGTT+TGG | - | chr8_4:46696958-46696977 | Msa1328730:intron | 30.0% |
| ! | GTGTATTTTGTTAGTTGGTT+TGG | - | chr8_4:46696990-46697009 | Msa1328730:intron | 30.0% |
| TTATGAATTCGATGCAGTAA+TGG | + | chr8_4:46697186-46697205 | None:intergenic | 30.0% | |
| ATAGATTATAACACAAGAGG+CGG | + | chr8_4:46697227-46697246 | None:intergenic | 30.0% | |
| AATGCATATATGCTCAATCA+GGG | + | chr8_4:46697306-46697325 | None:intergenic | 30.0% | |
| AAAAAGCAAATGTTGTGACT+AGG | + | chr8_4:46697618-46697637 | None:intergenic | 30.0% | |
| !!! | TATTTTGACACTTTTCGTCT+AGG | - | chr8_4:46698361-46698380 | Msa1328730:intron | 30.0% |
| ATCTGAGCATAAAGATAAAG+TGG | - | chr8_4:46698385-46698404 | Msa1328730:intron | 30.0% | |
| ATTCCATTTGACATATAAGG+TGG | + | chr8_4:46698511-46698530 | None:intergenic | 30.0% | |
| CTGATTCCATTTGACATATA+AGG | + | chr8_4:46698514-46698533 | None:intergenic | 30.0% | |
| GTGAATGTTTAAGAGTTAAG+TGG | + | chr8_4:46698607-46698626 | None:intergenic | 30.0% | |
| ! | AGTCAAACCGTTTTATACAA+AGG | + | chr8_4:46698687-46698706 | None:intergenic | 30.0% |
| ! | ACTTTTGTGTCATCTTCTTA+TGG | - | chr8_4:46698722-46698741 | Msa1328730:intron | 30.0% |
| TTTGCTCAAATCACCATATT+CGG | + | chr8_4:46698870-46698889 | None:intergenic | 30.0% | |
| AACAAACTGGATGCTTATAA+AGG | + | chr8_4:46699002-46699021 | None:intergenic | 30.0% | |
| GACTCAGTAATGTGTATTAT+TGG | - | chr8_4:46699132-46699151 | Msa1328730:intron | 30.0% | |
| !! | AACCAGGTAGCATATTTTAG+TGG | - | chr8_4:46695419-46695438 | Msa1328730:three_prime_UTR | 35.0% |
| !!! | ACCAGGTAGCATATTTTAGT+GGG | - | chr8_4:46695420-46695439 | Msa1328730:three_prime_UTR | 35.0% |
| TAAGATTTGGATCTGAGTGT+TGG | - | chr8_4:46695485-46695504 | Msa1328730:three_prime_UTR | 35.0% | |
| ! | TAGGTTTTTGCACCTCTTTA+AGG | - | chr8_4:46695570-46695589 | Msa1328730:three_prime_UTR | 35.0% |
| TGTGTTAAGGATCAAGATCA+GGG | + | chr8_4:46695602-46695621 | None:intergenic | 35.0% | |
| ATTGCTGCAAATCAAACTTC+TGG | - | chr8_4:46695848-46695867 | Msa1328730:intron | 35.0% | |
| CGTGGAAAAATTGAAAAGGA+CGG | - | chr8_4:46696002-46696021 | Msa1328730:CDS | 35.0% | |
| !! | GAGTAGTTAGCTTGTTAGTT+AGG | + | chr8_4:46696204-46696223 | None:intergenic | 35.0% |
| CACACTTTCAAGGAACAAAA+TGG | + | chr8_4:46696237-46696256 | None:intergenic | 35.0% | |
| !! | TTTTGTTCCTTGAAAGTGTG+AGG | - | chr8_4:46696237-46696256 | Msa1328730:CDS | 35.0% |
| ACTAACCAAAAACACGTTTG+AGG | + | chr8_4:46696311-46696330 | None:intergenic | 35.0% | |
| !!! | CAAACGTGTTTTTGGTTAGT+TGG | - | chr8_4:46696311-46696330 | Msa1328730:CDS | 35.0% |
| !!! | GTGTTTTTGGTTAGTTGGTT+TGG | - | chr8_4:46696316-46696335 | Msa1328730:CDS | 35.0% |
| CATGAAATACACGAACTGTT+AGG | - | chr8_4:46696597-46696616 | Msa1328730:intron | 35.0% | |
| TACACGAACTGTTAGGAATA+TGG | - | chr8_4:46696604-46696623 | Msa1328730:intron | 35.0% | |
| AGATAAATAGGAGGGTTCAA+GGG | + | chr8_4:46696787-46696806 | None:intergenic | 35.0% | |
| AAGATAAATAGGAGGGTTCA+AGG | + | chr8_4:46696788-46696807 | None:intergenic | 35.0% | |
| !! | GAGTAGTTAGCTTGTTAGTT+AGG | + | chr8_4:46696204-46696223 | None:intergenic | 35.0% |
| CACACTTTCAAGGAACAAAA+TGG | + | chr8_4:46696237-46696256 | None:intergenic | 35.0% | |
| TGACATCTCATCACATGTTT+AGG | - | chr8_4:46697104-46697123 | Msa1328730:CDS | 35.0% | |
| GACATCTCATCACATGTTTA+GGG | - | chr8_4:46697105-46697124 | Msa1328730:CDS | 35.0% | |
| ACATCTCATCACATGTTTAG+GGG | - | chr8_4:46697106-46697125 | Msa1328730:CDS | 35.0% | |
| ! | AGTAATGGTAGGGTATTTCT+AGG | + | chr8_4:46697171-46697190 | None:intergenic | 35.0% |
| AATTCGATGCAGTAATGGTA+GGG | + | chr8_4:46697181-46697200 | None:intergenic | 35.0% | |
| ATGCATATATGCTCAATCAG+GGG | + | chr8_4:46697305-46697324 | None:intergenic | 35.0% | |
| CAATGCATATATGCTCAATC+AGG | + | chr8_4:46697307-46697326 | None:intergenic | 35.0% | |
| AAATGGTAAAGTGATGCGAA+AGG | - | chr8_4:46697342-46697361 | Msa1328730:intron | 35.0% | |
| !! | AAGCTGTGTTAAGTTGAATG+CGG | - | chr8_4:46697641-46697660 | Msa1328730:intron | 35.0% |
| CTGTTTACATGTAACCAACA+AGG | + | chr8_4:46697677-46697696 | None:intergenic | 35.0% | |
| TATCTCAGCTTCATAGTCAT+AGG | + | chr8_4:46697716-46697735 | None:intergenic | 35.0% | |
| AGTTTACACTCTCAAAAGAG+CGG | - | chr8_4:46697776-46697795 | Msa1328730:intron | 35.0% | |
| GCAGGCATAATTAAAATCTC+TGG | + | chr8_4:46697902-46697921 | None:intergenic | 35.0% | |
| AGTGGCATGTTTGATATTGT+TGG | - | chr8_4:46698008-46698027 | Msa1328730:intron | 35.0% | |
| ! | GTTTAAGACTGCTGTCTTAT+CGG | - | chr8_4:46698293-46698312 | Msa1328730:intron | 35.0% |
| ! | TTTAAGACTGCTGTCTTATC+GGG | - | chr8_4:46698294-46698313 | Msa1328730:intron | 35.0% |
| CTTCCACCTTATATGTCAAA+TGG | - | chr8_4:46698505-46698524 | Msa1328730:intron | 35.0% | |
| ! | TCACATTTTCCTTGCTTCAT+AGG | - | chr8_4:46698623-46698642 | Msa1328730:intron | 35.0% |
| ! | TGCTTCTTTGTTATGCATCA+GGG | + | chr8_4:46698823-46698842 | None:intergenic | 35.0% |
| ! | TTGCTTCTTTGTTATGCATC+AGG | + | chr8_4:46698824-46698843 | None:intergenic | 35.0% |
| AGTCTAAACTCAACCGAATA+TGG | - | chr8_4:46698854-46698873 | Msa1328730:intron | 35.0% | |
| TCCCACTAAAATATGCTACC+TGG | + | chr8_4:46695424-46695443 | None:intergenic | 40.0% | |
| !! | TTGGATCTGAGTGTTGGATT+CGG | - | chr8_4:46695491-46695510 | Msa1328730:three_prime_UTR | 40.0% |
| TCAGGGAATACTCCTTAAAG+AGG | + | chr8_4:46695585-46695604 | None:intergenic | 40.0% | |
| CTGTGTTAAGGATCAAGATC+AGG | + | chr8_4:46695603-46695622 | None:intergenic | 40.0% | |
| GAGAATACGGAACTGTGTTA+AGG | + | chr8_4:46695615-46695634 | None:intergenic | 40.0% | |
| CATCTCTGGCATGAAATACA+CGG | - | chr8_4:46695968-46695987 | Msa1328730:intron | 40.0% | |
| TACACGGACTCTTAATAACG+TGG | - | chr8_4:46695984-46696003 | Msa1328730:CDS | 40.0% | |
| AACATCACCTCACACTTTCA+AGG | + | chr8_4:46696247-46696266 | None:intergenic | 40.0% | |
| TGGTCTTTCGTTAGTCAGTT+CGG | - | chr8_4:46696336-46696355 | Msa1328730:intron | 40.0% | |
| !! | CAAGATTATAAGGGTGTTCG+CGG | - | chr8_4:46696381-46696400 | Msa1328730:intron | 40.0% |
| !!! | GATTGGATTGGTTCGGTTTT+GGG | - | chr8_4:46696403-46696422 | Msa1328730:intron | 40.0% |
| ACCATCCAATCCAATCTCTT+CGG | - | chr8_4:46696433-46696452 | Msa1328730:intron | 40.0% | |
| CAAAACCGAAGAGATTGGAT+TGG | + | chr8_4:46696441-46696460 | None:intergenic | 40.0% | |
| ! | TTCCTTGAAAGTGTGAAGTG+AGG | - | chr8_4:46696889-46696908 | Msa1328730:intron | 40.0% |
| AACCTCACTTCACACTTTCA+AGG | + | chr8_4:46696894-46696913 | None:intergenic | 40.0% | |
| TGGTCTTTCGTTAGTCAGTT+TGG | - | chr8_4:46696336-46696355 | Msa1328730:intron | 40.0% | |
| !! | TAGGGTATTTCTAGGAGTCT+AGG | + | chr8_4:46697163-46697182 | None:intergenic | 40.0% |
| GAATTCGATGCAGTAATGGT+AGG | + | chr8_4:46697182-46697201 | None:intergenic | 40.0% | |
| ! | CTTGGAGCACTAAAACTTAC+AGG | - | chr8_4:46697385-46697404 | Msa1328730:intron | 40.0% |
| TACTTCTTTCAGTGTGCGAA+CGG | + | chr8_4:46697464-46697483 | None:intergenic | 40.0% | |
| TTTGATGCCACAAATGCACT+TGG | - | chr8_4:46697531-46697550 | Msa1328730:intron | 40.0% | |
| TTGATGCCACAAATGCACTT+GGG | - | chr8_4:46697532-46697551 | Msa1328730:intron | 40.0% | |
| ! | CATGTAACCAACAAGGTATC+AGG | + | chr8_4:46697670-46697689 | None:intergenic | 40.0% |
| ! | CATCATTTGAAGCCGTTGAA+GGG | - | chr8_4:46697752-46697771 | Msa1328730:intron | 40.0% |
| GAGTGTAAACTTCCCTTCAA+CGG | + | chr8_4:46697767-46697786 | None:intergenic | 40.0% | |
| TCAAAAGAGCGGTTTCAAAC+AGG | - | chr8_4:46697787-46697806 | Msa1328730:intron | 40.0% | |
| CTAATTCTGCAGAATGGCAA+TGG | + | chr8_4:46698257-46698276 | None:intergenic | 40.0% | |
| TATATGGGTAGTCTGTGTCA+TGG | + | chr8_4:46698413-46698432 | None:intergenic | 40.0% | |
| TGGGTTCATATACTTCAGAG+AGG | - | chr8_4:46698458-46698477 | Msa1328730:intron | 40.0% | |
| TACTTCAGAGAGGTTAGAGA+AGG | - | chr8_4:46698468-46698487 | Msa1328730:intron | 40.0% | |
| !! | TGGTTTGGTGCAAAGCTTAT+TGG | - | chr8_4:46698568-46698587 | Msa1328730:intron | 40.0% |
| AAGTGAAGTCCTATGAAGCA+AGG | + | chr8_4:46698635-46698654 | None:intergenic | 40.0% | |
| ! | TTCTTTGTTATGCATCAGGG+GGG | + | chr8_4:46698820-46698839 | None:intergenic | 40.0% |
| ! | CTTCTTTGTTATGCATCAGG+GGG | + | chr8_4:46698821-46698840 | None:intergenic | 40.0% |
| ! | GCTTCTTTGTTATGCATCAG+GGG | + | chr8_4:46698822-46698841 | None:intergenic | 40.0% |
| GGTTGAGTTTAGACTTCTGA+CGG | + | chr8_4:46698849-46698868 | None:intergenic | 40.0% | |
| AGACTAAATCCACAAGCTGA+TGG | - | chr8_4:46699093-46699112 | Msa1328730:intron | 40.0% | |
| ATTTCTGATCCATCAGCTTG+TGG | + | chr8_4:46699105-46699124 | None:intergenic | 40.0% | |
| !! | ATCTGAGTGTTGGATTCGGA+GGG | - | chr8_4:46695495-46695514 | Msa1328730:three_prime_UTR | 45.0% |
| AAGGAGGGTTCAAGTGTAGA+GGG | + | chr8_4:46696161-46696180 | None:intergenic | 45.0% | |
| AAAGGAGGGTTCAAGTGTAG+AGG | + | chr8_4:46696162-46696181 | None:intergenic | 45.0% | |
| !! | TTATAAGGGTGTTCGCGGAT+TGG | - | chr8_4:46696386-46696405 | Msa1328730:intron | 45.0% |
| !!! | GGATTGGATTGGTTCGGTTT+TGG | - | chr8_4:46696402-46696421 | Msa1328730:intron | 45.0% |
| ! | ACCGAAGAGATTGGATTGGA+TGG | + | chr8_4:46696437-46696456 | None:intergenic | 45.0% |
| ! | TAACACAAGAGGCGGTGTTT+TGG | + | chr8_4:46697219-46697238 | None:intergenic | 45.0% |
| CATATATGCTCAATCAGGGG+AGG | + | chr8_4:46697302-46697321 | None:intergenic | 45.0% | |
| TGGTAAAGTGATGCGAAAGG+TGG | - | chr8_4:46697345-46697364 | Msa1328730:intron | 45.0% | |
| GGTAAAGTGATGCGAAAGGT+GGG | - | chr8_4:46697346-46697365 | Msa1328730:intron | 45.0% | |
| ! | GCATCATTTGAAGCCGTTGA+AGG | - | chr8_4:46697751-46697770 | Msa1328730:intron | 45.0% |
| CAAGCAAAGCTGCTAAGTCA+TGG | + | chr8_4:46697924-46697943 | None:intergenic | 45.0% | |
| ATGGTCCATACAGAGAGCTA+TGG | + | chr8_4:46698238-46698257 | None:intergenic | 45.0% | |
| TGCCATTCTGCAGAATTAGC+AGG | - | chr8_4:46698258-46698277 | Msa1328730:intron | 45.0% | |
| CATTCTGCAGAATTAGCAGG+CGG | - | chr8_4:46698261-46698280 | Msa1328730:intron | 45.0% | |
| ACAAACAGTCAGCTCTACAG+AGG | + | chr8_4:46698769-46698788 | None:intergenic | 45.0% | |
| !!! | TATATTATTTTTTATATTCT+CGG | + | chr8_4:46699179-46699198 | None:intergenic | 5.0% |
| ! | TGGTTGAGAGCACAAACAGC+AGG | + | chr8_4:46695404-46695423 | None:intergenic | 50.0% |
| ! | TGCTGTTTGTGCTCTCAACC+AGG | - | chr8_4:46695403-46695422 | Msa1328730:three_prime_UTR | 50.0% |
| !! | GATCTGAGTGTTGGATTCGG+AGG | - | chr8_4:46695494-46695513 | Msa1328730:three_prime_UTR | 50.0% |
| GGAGAGAGATCTCTCCTCTA+AGG | - | chr8_4:46696077-46696096 | Msa1328730:intron | 50.0% | |
| GATTTGAGTGACCAGAGCGA+TGG | + | chr8_4:46696110-46696129 | None:intergenic | 50.0% | |
| AGGAGGGTTCAAGTGTAGAG+GGG | + | chr8_4:46696160-46696179 | None:intergenic | 50.0% | |
| !! | GTTCGCGGATTGGATTGGTT+CGG | - | chr8_4:46696396-46696415 | Msa1328730:intron | 50.0% |
| !!! | TGGATTGGTTCGGTTTTGGG+AGG | - | chr8_4:46696406-46696425 | Msa1328730:intron | 50.0% |
| GATTTGAGTGACCAGAGCGA+TGG | + | chr8_4:46696110-46696129 | None:intergenic | 50.0% | |
| TAGGAGGGTTCAAGGGTAGA+GGG | + | chr8_4:46696780-46696799 | None:intergenic | 50.0% | |
| ATAGGAGGGTTCAAGGGTAG+AGG | + | chr8_4:46696781-46696800 | None:intergenic | 50.0% | |
| ATGCCACAAATGCACTTGGG+AGG | - | chr8_4:46697535-46697554 | Msa1328730:intron | 50.0% | |
| TGTCCTCCCAAGTGCATTTG+TGG | + | chr8_4:46697541-46697560 | None:intergenic | 50.0% | |
| TTATTCCAGCCACGTCTTGC+TGG | - | chr8_4:46697817-46697836 | Msa1328730:intron | 50.0% | |
| TATTCCAGCCACGTCTTGCT+GGG | - | chr8_4:46697818-46697837 | Msa1328730:intron | 50.0% | |
| CAAAGCTGCTAAGTCATGGC+AGG | + | chr8_4:46697920-46697939 | None:intergenic | 50.0% | |
| CCATACAGAGAGCTATGGCA+TGG | + | chr8_4:46698233-46698252 | None:intergenic | 50.0% | |
| CCATGCCATAGCTCTCTGTA+TGG | - | chr8_4:46698230-46698249 | Msa1328730:intron | 50.0% | |
| CGCCTGCTAATTCTGCAGAA+TGG | + | chr8_4:46698263-46698282 | None:intergenic | 50.0% | |
| AATTAGCAGGCGGCAGTGAT+TGG | - | chr8_4:46698271-46698290 | Msa1328730:intron | 50.0% | |
| AAGACTGCTGTCTTATCGGG+AGG | - | chr8_4:46698297-46698316 | Msa1328730:intron | 50.0% | |
| AGACTGCTGTCTTATCGGGA+GGG | - | chr8_4:46698298-46698317 | Msa1328730:intron | 50.0% | |
| GAGGGTCTGCATGTTTACCA+GGG | - | chr8_4:46698316-46698335 | Msa1328730:intron | 50.0% | |
| ! | GCATGTTTACCAGGGTTAGC+TGG | - | chr8_4:46698324-46698343 | Msa1328730:intron | 50.0% |
| GGAAGTTTACCAGCTAACCC+TGG | + | chr8_4:46698336-46698355 | None:intergenic | 50.0% | |
| GGTGCAGATACTGCATGGTT+TGG | - | chr8_4:46698553-46698572 | Msa1328730:intron | 50.0% | |
| ! | TTTGTTATGCATCAGGGGGG+AGG | + | chr8_4:46698817-46698836 | None:intergenic | 50.0% |
| GGAGGGTTCAAGTGTAGAGG+GGG | + | chr8_4:46696159-46696178 | None:intergenic | 55.0% | |
| !! | AGGGTGTTCGCGGATTGGAT+TGG | - | chr8_4:46696391-46696410 | Msa1328730:intron | 55.0% |
| GGAGAGAGATCTCTCCTCGA+AGG | - | chr8_4:46696696-46696715 | Msa1328730:intron | 55.0% | |
| AGGAGGGTTCAAGGGTAGAG+GGG | + | chr8_4:46696779-46696798 | None:intergenic | 55.0% | |
| AGTGATGCGAAAGGTGGGTG+TGG | - | chr8_4:46697351-46697370 | Msa1328730:intron | 55.0% | |
| AAGGTGGGTGTGGAGGTTGT+TGG | - | chr8_4:46697361-46697380 | Msa1328730:intron | 55.0% | |
| AGGTGGGTGTGGAGGTTGTT+GGG | - | chr8_4:46697362-46697381 | Msa1328730:intron | 55.0% | |
| GCGGTTGCCTGATACCTTGT+TGG | - | chr8_4:46697660-46697679 | Msa1328730:intron | 55.0% | |
| ATTCCAGCCACGTCTTGCTG+GGG | - | chr8_4:46697819-46697838 | Msa1328730:intron | 55.0% | |
| ACTTACACCCCAGCAAGACG+TGG | + | chr8_4:46697829-46697848 | None:intergenic | 55.0% | |
| GGAGGGTCTGCATGTTTACC+AGG | - | chr8_4:46698315-46698334 | Msa1328730:intron | 55.0% | |
| AGAGTCATCCCTCCTCCACA+CGG | - | chr8_4:46698532-46698551 | Msa1328730:intron | 55.0% | |
| TATCTGCACCGTGTGGAGGA+GGG | + | chr8_4:46698543-46698562 | None:intergenic | 55.0% | |
| CATGCAGTATCTGCACCGTG+TGG | + | chr8_4:46698550-46698569 | None:intergenic | 55.0% | |
| CACACGGTGCAGATACTGCA+TGG | - | chr8_4:46698548-46698567 | Msa1328730:intron | 55.0% | |
| TATGCATCAGGGGGGAGGAA+AGG | + | chr8_4:46698812-46698831 | None:intergenic | 55.0% | |
| !! | GCGATGGCTCTGAGCCTTAG+AGG | + | chr8_4:46696094-46696113 | None:intergenic | 60.0% |
| AAGGCTCAGAGCCATCGCTC+TGG | - | chr8_4:46696096-46696115 | Msa1328730:intron | 60.0% | |
| AAGGCTCAGAGCCATCGCTC+TGG | - | chr8_4:46696096-46696115 | Msa1328730:intron | 60.0% | |
| GAGGGTTCAAGGGTAGAGGG+GGG | + | chr8_4:46696777-46696796 | None:intergenic | 60.0% | |
| GGAGGGTTCAAGGGTAGAGG+GGG | + | chr8_4:46696778-46696797 | None:intergenic | 60.0% | |
| GATGCGAAAGGTGGGTGTGG+AGG | - | chr8_4:46697354-46697373 | Msa1328730:intron | 60.0% | |
| GGTGTGGAGGTTGTTGGGCT+TGG | - | chr8_4:46697367-46697386 | Msa1328730:intron | 60.0% | |
| GTATCTGCACCGTGTGGAGG+AGG | + | chr8_4:46698544-46698563 | None:intergenic | 60.0% | |
| GCAGTATCTGCACCGTGTGG+AGG | + | chr8_4:46698547-46698566 | None:intergenic | 60.0% | |
| !! | GCGATGGCTCTGAGCCTTCG+AGG | + | chr8_4:46696713-46696732 | None:intergenic | 65.0% |
| ACACCCCAGCAAGACGTGGC+TGG | + | chr8_4:46697825-46697844 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 46695352 | 46699210 | 46695352 | ID=Msa1328730;Name=Msa1328730 |
| chr8_4 | mRNA | 46695352 | 46699210 | 46695352 | ID=Msa1328730-mRNA-1;Parent=Msa1328730;Name=Msa1328730-mRNA-1;_AED=0.07;_eAED=0.10;_QI=40|0.5|0.42|1|0.83|0.71|7|350|235 |
| chr8_4 | exon | 46695352 | 46695760 | 46695352 | ID=Msa1328730-mRNA-1:exon:13377;Parent=Msa1328730-mRNA-1 |
| chr8_4 | exon | 46695970 | 46696086 | 46695970 | ID=Msa1328730-mRNA-1:exon:13376;Parent=Msa1328730-mRNA-1 |
| chr8_4 | exon | 46696217 | 46696350 | 46696217 | ID=Msa1328730-mRNA-1:exon:13375;Parent=Msa1328730-mRNA-1 |
| chr8_4 | exon | 46696720 | 46696865 | 46696720 | ID=Msa1328730-mRNA-1:exon:13374;Parent=Msa1328730-mRNA-1 |
| chr8_4 | exon | 46697082 | 46697224 | 46697082 | ID=Msa1328730-mRNA-1:exon:13373;Parent=Msa1328730-mRNA-1 |
| chr8_4 | exon | 46698648 | 46698723 | 46698648 | ID=Msa1328730-mRNA-1:exon:13372;Parent=Msa1328730-mRNA-1 |
| chr8_4 | exon | 46699138 | 46699210 | 46699138 | ID=Msa1328730-mRNA-1:exon:13371;Parent=Msa1328730-mRNA-1 |
| chr8_4 | five_prime_UTR | 46699171 | 46699210 | 46699171 | ID=Msa1328730-mRNA-1:five_prime_utr;Parent=Msa1328730-mRNA-1 |
| chr8_4 | CDS | 46699138 | 46699170 | 46699138 | ID=Msa1328730-mRNA-1:cds;Parent=Msa1328730-mRNA-1 |
| chr8_4 | CDS | 46698648 | 46698723 | 46698648 | ID=Msa1328730-mRNA-1:cds;Parent=Msa1328730-mRNA-1 |
| chr8_4 | CDS | 46697082 | 46697224 | 46697082 | ID=Msa1328730-mRNA-1:cds;Parent=Msa1328730-mRNA-1 |
| chr8_4 | CDS | 46696720 | 46696865 | 46696720 | ID=Msa1328730-mRNA-1:cds;Parent=Msa1328730-mRNA-1 |
| chr8_4 | CDS | 46696217 | 46696350 | 46696217 | ID=Msa1328730-mRNA-1:cds;Parent=Msa1328730-mRNA-1 |
| chr8_4 | CDS | 46695970 | 46696086 | 46695970 | ID=Msa1328730-mRNA-1:cds;Parent=Msa1328730-mRNA-1 |
| chr8_4 | CDS | 46695702 | 46695760 | 46695702 | ID=Msa1328730-mRNA-1:cds;Parent=Msa1328730-mRNA-1 |
| chr8_4 | three_prime_UTR | 46695352 | 46695701 | 46695352 | ID=Msa1328730-mRNA-1:three_prime_utr;Parent=Msa1328730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
